Os01g0125900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin-conjugating enzyme, E2 domain containing protein.
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Os01g0125900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin-conjugating enzyme, E2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.7 | 0.234 | 9.75 | 0.21 | 0.55 | 0.127 | -0.242 | 1.6 | -0.0112 | 6 | 18.9 | 17 | -- | -- |
| 27.21 | 0.245 | 9.79 | -0.0647 | 0.552 | 0.23 | -0.532 | -- | -0.0957 | 5.69 | 18.9 | 17 | -- | -- |
| 24.79 | 0.232 | 9.75 | 0.248 | 0.554 | 0.104 | -- | 1.76 | 0.00302 | 6.09 | 18.7 | 81 | -- | -- |
| 27.84 | 0.246 | 9.79 | -0.0601 | 0.548 | 0.225 | -- | -- | -0.0931 | 5.87 | 19.29 | 12 | -- | -- |
| 35.99 | 0.279 | 9.71 | 0.318 | -- | -0.338 | -- | 1.69 | 0.0726 | -- | 22.15 | 487 | -- | -- |
| 28.02 | 0.248 | 9.78 | -0.0138 | 0.507 | -- | -0.489 | -- | -0.0565 | 6.13 | -- | -- | -- | -- |
| 28.53 | 0.25 | 9.78 | -0.0177 | 0.506 | -- | -- | -- | -0.0542 | 6.39 | -- | -- | -- | -- |
| 38.23 | 0.288 | 9.78 | 0.0572 | -- | -0.36 | -- | -- | -0.0248 | -- | 24.7 | 520 | -- | -- |
| 27.94 | 0.246 | 9.78 | -- | 0.544 | 0.197 | -- | -- | -0.0832 | 5.96 | 19.5 | 10 | -- | -- |
| 41.81 | 0.302 | 9.79 | -0.00454 | -- | -- | -- | -- | -0.0435 | -- | -- | -- | -- | -- |
| 28.54 | 0.25 | 9.78 | -- | 0.505 | -- | -- | -- | -0.0523 | 6.39 | -- | -- | -- | -- |
| 38.28 | 0.288 | 9.78 | -- | -- | -0.346 | -- | -- | -0.0239 | -- | 24.9 | 509 | -- | -- |
| 41.81 | 0.302 | 9.79 | -- | -- | -- | -- | -- | -0.043 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.07 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 23.25 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 5 | 23.43 | wind | 7.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 6 | 23.46 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 7 | 23.48 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 9 | 23.50 | wind | 7.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 10 | 23.51 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 14 | 23.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 17 | 23.58 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 27 | 23.62 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 11 | 17 |
| 36 | 23.66 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 40 | 23.67 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 11 | 13 |
| 76 | 23.75 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 92 | 23.76 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 97 | 23.76 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 21 | 21 |
| 101 | 23.76 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 7 | 6 |
| 122 | 23.78 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 2 | 16 |
| 137 | 23.79 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 139 | 23.79 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 149 | 23.80 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 11 | 18 |
| 151 | 23.80 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 19 |
| 161 | 23.81 | atmosphere | 1005.0 | 14400 | < th | dose independent | no | NA | NA |
| 183 | 23.81 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 190 | 23.82 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 2 | 12 |
| 194 | 23.82 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 1 | 17 |
| 206 | 23.83 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 1 | NA |
| 210 | 23.83 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 211 | 23.83 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 212 | 23.83 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 21 | 7 |
| 213 | 23.83 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 266 | 23.84 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 2 | 22 |
| 269 | 23.84 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 318 | 23.86 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 353 | 23.86 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 355 | 23.87 | atmosphere | 1005.0 | 14400 | > th | dose independent | no | NA | NA |
| 398 | 23.88 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 440 | 23.89 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 11 | 13 |
| 531 | 23.91 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 574 | 23.93 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 608 | 23.94 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 673 | 23.97 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 825 | 24.05 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 842 | 24.07 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 6 |
| 864 | 24.09 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 896 | 24.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 907 | 24.13 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 943 | 24.15 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 999 | 24.20 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 1 |