Os01g0229900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Shaggy-related protein kinase dzeta (EC 2.7.1.-) (ASK-dzeta).
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Os01g0229900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Shaggy-related protein kinase dzeta (EC 2.7.1.-) (ASK-dzeta).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.9 | 0.407 | 8.18 | 1.45 | 0.76 | 0.482 | 0.568 | 3.92 | 0.269 | 15.2 | 18.58 | 2757 | -- | -- |
| 86.55 | 0.433 | 8.28 | 0.499 | 0.684 | 0.802 | 0.36 | -- | 0.213 | 15 | 30.7 | 1790 | -- | -- |
| 75.51 | 0.405 | 8.18 | 1.41 | 0.732 | 0.519 | -- | 3.95 | 0.265 | 15.2 | 17.98 | 3018 | -- | -- |
| 85.95 | 0.432 | 8.28 | 0.422 | 0.713 | 0.658 | -- | -- | 0.184 | 15.2 | 29.4 | 1700 | -- | -- |
| 97.29 | 0.462 | 8.29 | 0.805 | -- | 0.903 | -- | 2.91 | 0.0504 | -- | 17.98 | 3018 | -- | -- |
| 99.68 | 0.468 | 8.31 | 0.557 | 0.692 | -- | 0.27 | -- | 0.0899 | 15.3 | -- | -- | -- | -- |
| 99.91 | 0.468 | 8.31 | 0.562 | 0.694 | -- | -- | -- | 0.0915 | 15.3 | -- | -- | -- | -- |
| 103.6 | 0.476 | 8.32 | 0.401 | -- | 0.989 | -- | -- | 0.00814 | -- | 25.1 | 1820 | -- | -- |
| 89.75 | 0.441 | 8.31 | -- | 0.67 | 0.734 | -- | -- | 0.0629 | 15 | 27.19 | 1715 | -- | -- |
| 127.11 | 0.527 | 8.31 | 0.533 | -- | -- | -- | -- | 0.0732 | -- | -- | -- | -- | -- |
| 108.24 | 0.487 | 8.32 | -- | 0.683 | -- | -- | -- | 0.0289 | 15.3 | -- | -- | -- | -- |
| 107.65 | 0.485 | 8.34 | -- | -- | 1.04 | -- | -- | -0.0569 | -- | 24.7 | 1807 | -- | -- |
| 134.6 | 0.542 | 8.32 | -- | -- | -- | -- | -- | 0.0141 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.10 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 2 | 74.15 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 37 | 74.64 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 42 | 74.66 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 81 | 74.84 | temperature | 10 | 4320 | > th | dose dependent | sin | 13 | NA |
| 102 | 74.92 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 249 | 75.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 17 |
| 319 | 75.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 679 | 75.89 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 695 | 75.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 857 | 76.06 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 998 | 76.19 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |