BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0232500 Os01g0232500|AK067926
(485 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G53025.1 | chr1:19757072-19759474 REVERSE LENGTH=544 322 3e-88
AT3G15355.1 | chr3:5183858-5186669 FORWARD LENGTH=610 305 5e-83
AT2G16920.1 | chr2:7334559-7338827 REVERSE LENGTH=1103 290 1e-78
AT2G33770.1 | chr2:14277785-14281482 REVERSE LENGTH=908 278 7e-75
AT1G53023.1 | chr1:19754214-19755843 REVERSE LENGTH=317 275 4e-74
AT2G02760.1 | chr2:774271-775149 FORWARD LENGTH=153 75 6e-14
AT1G14400.1 | chr1:4927294-4928136 REVERSE LENGTH=153 75 8e-14
AT5G53300.1 | chr5:21632802-21633989 REVERSE LENGTH=149 70 3e-12
AT5G41700.4 | chr5:16676072-16677223 FORWARD LENGTH=150 69 4e-12
AT5G56150.1 | chr5:22729756-22730964 FORWARD LENGTH=149 69 4e-12
AT4G27960.2 | chr4:13916065-13917293 REVERSE LENGTH=179 69 5e-12
AT3G08690.1 | chr3:2641487-2642489 FORWARD LENGTH=149 68 1e-11
AT2G16740.1 | chr2:7267880-7268737 FORWARD LENGTH=149 67 2e-11
AT5G05080.1 | chr5:1498727-1499972 REVERSE LENGTH=252 66 4e-11
AT5G62540.1 | chr5:25104679-25105465 FORWARD LENGTH=151 66 5e-11
AT3G08700.1 | chr3:2643482-2644545 FORWARD LENGTH=150 65 8e-11
AT3G13550.1 | chr3:4423569-4424797 REVERSE LENGTH=183 64 1e-10
AT1G64230.4 | chr1:23833792-23835220 FORWARD LENGTH=191 62 8e-10
AT5G50870.2 | chr5:20699626-20700998 REVERSE LENGTH=204 59 5e-09
AT3G12775.1 | chr3:4059772-4060944 FORWARD LENGTH=363 59 9e-09
AT3G57870.1 | chr3:21428831-21430110 REVERSE LENGTH=161 54 2e-07
AT3G46460.1 | chr3:17096120-17097315 REVERSE LENGTH=167 50 3e-06
AT3G55380.2 | chr3:20531520-20532895 FORWARD LENGTH=202 49 7e-06
>AT1G53025.1 | chr1:19757072-19759474 REVERSE LENGTH=544
Length = 543
Score = 322 bits (825), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 151/248 (60%), Positives = 188/248 (75%), Gaps = 4/248 (1%)
Query: 142 TVEDESANKSANKSQL--FKQFDTVKNFSDHHYAAT--SGDVTKRDWVKRIQHDWKLLEK 197
+V+D S + + L FK+FDTV++FSDHHYA+ S ++WVK++Q DWK+LE
Sbjct: 226 SVQDSSNARKLKEEFLRDFKRFDTVEDFSDHHYASKGKSSKQHSKNWVKKVQADWKILEN 285
Query: 198 DLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLR 257
DLP +I VR E RMDLLRA IIG +GTPYHDGLFFFDIQF ++YP+ PP+V+YHSGGLR
Sbjct: 286 DLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLR 345
Query: 258 INPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGYASY 317
INPNLYN GKVCLSLLGTWAGS E W P++STMLQ+LVSIQALILNEKPYFNEPGY
Sbjct: 346 INPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQS 405
Query: 318 ANSVSGERIAMEYNDNTFLHSCRTMLYSLRRPPEHFADLVTSHFRERGHTILAACRYYME 377
A + SGE + Y++N FL S +TM+YS+RRPP+HF + V +H+ R H I+ AC Y
Sbjct: 406 AGTASGESKSKVYSENVFLLSLKTMVYSIRRPPQHFEEYVQNHYFVRSHDIVKACNAYKA 465
Query: 378 GHKVGSVV 385
G +GS+V
Sbjct: 466 GAPLGSMV 473
>AT3G15355.1 | chr3:5183858-5186669 FORWARD LENGTH=610
Length = 609
Score = 305 bits (780), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 140/231 (60%), Positives = 171/231 (74%), Gaps = 2/231 (0%)
Query: 157 LFKQFDTVKNFSDHHYAA--TSGDVTKRDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDL 214
FK+FD V++FSDHHYA+ T+ +DW KRIQ +W++LEKDLP I+VR E RMDL
Sbjct: 304 FFKRFDIVEDFSDHHYASKGTTSKQHSKDWAKRIQDEWRILEKDLPEMIFVRAYESRMDL 363
Query: 215 LRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLG 274
LRA IIG +GTPYHDGLFFFDI F ++YP+ PP V+YHSGGLRINPNLYN GKVCLSLLG
Sbjct: 364 LRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLG 423
Query: 275 TWAGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGYASYANSVSGERIAMEYNDNT 334
TW+G+ E W P+ STMLQVLVSIQ LILN+KPYFNEPGY A S GE + Y++NT
Sbjct: 424 TWSGNQREKWIPNTSTMLQVLVSIQGLILNQKPYFNEPGYERSAGSAHGESTSKAYSENT 483
Query: 335 FLHSCRTMLYSLRRPPEHFADLVTSHFRERGHTILAACRYYMEGHKVGSVV 385
F+ S +TM+Y++RRPP++F D HF H +L AC Y G G +V
Sbjct: 484 FILSLKTMVYTMRRPPKYFEDFAYGHFFSCAHDVLKACNAYRNGATPGYLV 534
>AT2G16920.1 | chr2:7334559-7338827 REVERSE LENGTH=1103
Length = 1102
Score = 290 bits (741), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 131/250 (52%), Positives = 174/250 (69%), Gaps = 2/250 (0%)
Query: 136 QSSSKLTVEDESANKSANKSQLFKQFDTVKNFSDHHYAATSGDVTK-RDWVKRIQHDWKL 194
++S+ L ED+ S S F++FD ++ DHH+ G TK R W K++ DWK+
Sbjct: 803 ETSTFLEDEDKPV-PSEGDSCSFRRFDISQDPLDHHFLGVDGQKTKERQWFKKVDQDWKI 861
Query: 195 LEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSG 254
L+ +LP I+VR EDRMDLLRA I+G GTPY DGLFFFD + YP+ PPS YYHSG
Sbjct: 862 LQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSG 921
Query: 255 GLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGY 314
G R+NPNLY GKVCLSLL TW G G E W+P S++LQVLVS+Q L+LN KPYFNE GY
Sbjct: 922 GWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGY 981
Query: 315 ASYANSVSGERIAMEYNDNTFLHSCRTMLYSLRRPPEHFADLVTSHFRERGHTILAACRY 374
+ GE+ ++ YN+NTFL +C+TM+Y +R+PP+ F +L+ HFR+RG+ IL AC
Sbjct: 982 DKQVGTAEGEKNSLGYNENTFLLNCKTMMYLMRKPPKDFEELIKDHFRKRGYYILKACDA 1041
Query: 375 YMEGHKVGSV 384
YM+G+ +GS+
Sbjct: 1042 YMKGYLIGSL 1051
>AT2G33770.1 | chr2:14277785-14281482 REVERSE LENGTH=908
Length = 907
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 131/255 (51%), Positives = 176/255 (69%), Gaps = 12/255 (4%)
Query: 141 LTVEDESANKSANKSQL--------FKQFDTVKNFSDHHYAATSGDVTK----RDWVKRI 188
+ +E + NK+ + + L F+QFD V + SDHH+ ++ + + + WVK++
Sbjct: 608 IPIEGKGINKTLDSTLLENSRNQVRFRQFDMVNDCSDHHFLSSDKGLAQSQVTKSWVKKV 667
Query: 189 QHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPS 248
Q +W LE +LP +IYVRV E+RMDLLRAA++G GTPYHDGLFFFDI YP PP
Sbjct: 668 QQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHEPPM 727
Query: 249 VYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNEKPY 308
V+YHSGG+R+NPNLY +G+VCLSLL TW+GSG E WN S++LQ+L+S QAL+LNEKPY
Sbjct: 728 VHYHSGGMRLNPNLYESGRVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQALVLNEKPY 787
Query: 309 FNEPGYASYANSVSGERIAMEYNDNTFLHSCRTMLYSLRRPPEHFADLVTSHFRERGHTI 368
FNE GY GE+ ++ YN+N FL +C++M+ LR+PP+HF LV HF R +
Sbjct: 788 FNEAGYDKQLGRAEGEKNSVSYNENAFLITCKSMISMLRKPPKHFEMLVKDHFTHRAQHV 847
Query: 369 LAACRYYMEGHKVGS 383
LAAC+ YMEG VGS
Sbjct: 848 LAACKAYMEGVPVGS 862
>AT1G53023.1 | chr1:19754214-19755843 REVERSE LENGTH=317
Length = 316
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/239 (56%), Positives = 166/239 (69%), Gaps = 22/239 (9%)
Query: 158 FKQFDTVKNFSDHHYAATSGDVTK------------RDWVKRIQHDWKLLEKDLPASIYV 205
FK+FDTV++FSDHHYAA G K ++WVK IQ +WK+L+K+LP +I+V
Sbjct: 21 FKRFDTVEDFSDHHYAA-EGSPAKLSLWHLKFKGRPKNWVKDIQKEWKILDKNLPETIFV 79
Query: 206 RVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNN 265
R E R+DLLRA IIG +GTPYHDGLFFFDIQF ++YP+ PP V+YHSGGLRINPNLY
Sbjct: 80 RACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKC 139
Query: 266 GKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGYASYANSVSGER 325
GKVCLSL+ TW G E W P +STMLQ+LVSIQALILNEKPY+NEPGY + GE
Sbjct: 140 GKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNEKPYYNEPGYEKSMGTPLGES 199
Query: 326 IAMEYNDNTFLHSCRTMLYSLRRPPEHFADLVTSHFRERGHTILAACRYYMEGHKVGSV 384
+ +Y++N F+ S +TM HF + V SHF R H I+ AC Y +G VGS+
Sbjct: 200 YSKDYSENVFVFSLKTM---------HFEEFVRSHFFVRSHDIVKACNAYKDGAPVGSI 249
>AT2G02760.1 | chr2:774271-775149 FORWARD LENGTH=153
Length = 152
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KR+ D+K L++D PA I ++ + L A I GP TP+ G F +QFS YP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP+V + S +PN+Y +G +CL +L W+P + +L SIQ+L+ +
Sbjct: 67 PPTVRFVSRMF--HPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
Query: 306 KPYFNEPGYASYANSVSGERIAMEYN 331
P N P + A S + EYN
Sbjct: 117 NP--NSPANSEAARMFSESK--REYN 138
>AT1G14400.1 | chr1:4927294-4928136 REVERSE LENGTH=153
Length = 152
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KR+ D+K L++D PA I ++ + L A I GP TP+ G F +QFS YP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP+V + S +PN+Y +G +CL +L W+P + +L SIQ+L+ +
Sbjct: 67 PPTVRFVSRMF--HPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
Query: 306 KPYFNEPGYASYANSVSGERIAMEYN 331
P N P + A S + EYN
Sbjct: 117 NP--NSPANSEAARMYSESK--REYN 138
>AT5G53300.1 | chr5:21632802-21633989 REVERSE LENGTH=149
Length = 148
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KRI + K L+KD P S + M +A I+GP +PY G+F I F YP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + + +PN+ +NG +CL +L E W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVAFRTKVF--HPNINSNGSICLDILK-------EQWSPAL-TISKVLLSICSLLTDP 113
Query: 306 KP 307
P
Sbjct: 114 NP 115
>AT5G41700.4 | chr5:16676072-16677223 FORWARD LENGTH=150
Length = 149
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 13/124 (10%)
Query: 186 KRIQHDWKLLEKDLPASIYVR--VAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYP 243
KRI + K L+KD P S VAED M +A I+GP +PY G+F I F YP
Sbjct: 4 KRILKELKDLQKDPPTSCIFAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 62
Query: 244 ANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALIL 303
PP V + + +PN+ +NG +CL +L E W+P+ T+ +VL+SI +L+
Sbjct: 63 FKPPKVAFRTKVF--HPNINSNGSICLDILK-------EQWSPAL-TISKVLLSICSLLT 112
Query: 304 NEKP 307
+ P
Sbjct: 113 DPNP 116
>AT5G56150.1 | chr5:22729756-22730964 FORWARD LENGTH=149
Length = 148
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KRI + + L++D P S D M +A I+GP +P+ G+F I F YP
Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + + +PN+ +NG +CL +L E W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVAFRTK--VYHPNINSNGSICLDILK-------EQWSPAL-TVSKVLLSICSLLTDP 113
Query: 306 KPYFNEPGYASYANSVSGERIAME 329
P ++P A+ +R+ E
Sbjct: 114 NP--DDPLVPEIAHIYKTDRVKYE 135
>AT4G27960.2 | chr4:13916065-13917293 REVERSE LENGTH=179
Length = 178
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KRI + K L+KD P S + M +A I+GP +PY G+F I F YP
Sbjct: 34 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 93
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + + +PN+ +NG +CL +L E W+P+ T+ +VL+SI +L+ +
Sbjct: 94 PPKVAFRTKVF--HPNINSNGSICLDILK-------EQWSPAL-TISKVLLSICSLLTDP 143
Query: 306 KP 307
P
Sbjct: 144 NP 145
>AT3G08690.1 | chr3:2641487-2642489 FORWARD LENGTH=149
Length = 148
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KRI + K L+KD P++ + M +A I+GP +PY G+F I F YP
Sbjct: 4 KRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFK 63
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + + +PN+ +NG +CL +L E W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVSFKTK--VYHPNINSNGSICLDILK-------EQWSPAL-TISKVLLSICSLLTDP 113
Query: 306 KP 307
P
Sbjct: 114 NP 115
>AT2G16740.1 | chr2:7267880-7268737 FORWARD LENGTH=149
Length = 148
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
+RI + K L++D P S + M +A I+GP +PY G+F +I F YP
Sbjct: 4 RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFK 63
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + + +PN+ +NG +CL +L + W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVVFRTKVF--HPNINSNGNICLDILK-------DQWSPAL-TISKVLLSICSLLTDP 113
Query: 306 KP 307
P
Sbjct: 114 NP 115
>AT5G05080.1 | chr5:1498727-1499972 REVERSE LENGTH=252
Length = 251
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 17/150 (11%)
Query: 183 DWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSY 242
+ +K++ + K L++ P I V V ++ + A I GP GTPY +GLF + S+ +
Sbjct: 10 NVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDF 69
Query: 243 PANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALI 302
P +PP Y+ + +PN+ +NG++C++ L + WNPS + VL ++ L+
Sbjct: 70 PHSPPKGYFMTKIF--HPNVASNGEICVNTLK-------KDWNPSLG-LRHVLSVVRCLL 119
Query: 303 LNEKPYFNEPGYASYANSVSGERIAMEYND 332
+ EP S N +G+ + Y++
Sbjct: 120 I-------EPFPESALNEQAGKMLLENYDE 142
>AT5G62540.1 | chr5:25104679-25105465 FORWARD LENGTH=151
Length = 150
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KR+ D+K L+KD P I ++ + A I GP+ TP+ G F + F+ YP
Sbjct: 7 KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNK 66
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + S +PN+Y +G +CL +L W+P + VL SIQ+L+ +
Sbjct: 67 PPIVRFVSR--MFHPNIYADGSICLDILQN-------QWSPIYD-VAAVLTSIQSLLCDP 116
Query: 306 KPYFNEPGYASYANSVSGERIAMEYN 331
P + P A A S + EYN
Sbjct: 117 NP--DSPANAEAARLFSENK--REYN 138
>AT3G08700.1 | chr3:2643482-2644545 FORWARD LENGTH=150
Length = 149
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 13/128 (10%)
Query: 186 KRIQHDWKLLEKDLPASIYV-RVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPA 244
KRI + + +++ PA+ VAE+ + +A I+GP +PY G+F I FS+ YP
Sbjct: 4 KRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPF 63
Query: 245 NPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILN 304
PP V + + +PN+ + G +CL +L E W+P+ +T +VL+SI +L+ +
Sbjct: 64 KPPKVNFKTKVY--HPNIDSKGSICLDILK-------EQWSPAPTTS-KVLLSICSLLTD 113
Query: 305 EKPYFNEP 312
P N+P
Sbjct: 114 PNP--NDP 119
>AT3G13550.1 | chr3:4423569-4424797 REVERSE LENGTH=183
Length = 182
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 23/147 (15%)
Query: 172 YAATSGDVTKRDWV---------KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGP 222
YA SG T WV KRIQ + L D P D + A IIGP
Sbjct: 18 YAGYSG--TASSWVAKTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGP 75
Query: 223 KGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRI-NPNLYNNGKVCLSLLGTWAGSGC 281
GTPY G+FF DI F + YP PP + + + RI + N+ G + +++L
Sbjct: 76 SGTPYEGGIFFLDIIFPSDYPFKPPKLVFKT---RIYHCNVDTAGDLSVNILR------- 125
Query: 282 ETWNPSQSTMLQVLVSIQALILNEKPY 308
++W+P+ T+ +VL +I+++ L +PY
Sbjct: 126 DSWSPAL-TITKVLQAIRSIFLKPEPY 151
>AT1G64230.4 | chr1:23833792-23835220 FORWARD LENGTH=191
Length = 190
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 203 IYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNL 262
+ VAED M +A I+GP +PY G+F I F YP PP V + + +PN+
Sbjct: 64 LLCPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVF--HPNV 120
Query: 263 YNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGYASYANSVS 322
+NG +CL +L E W+P+ T+ +VL+SI +L+ + P ++P A+
Sbjct: 121 NSNGSICLDILK-------EQWSPAL-TISKVLLSICSLLTDPNP--DDPLVPEIAHMYK 170
Query: 323 GERIAME 329
+R E
Sbjct: 171 TDRAKYE 177
>AT5G50870.2 | chr5:20699626-20700998 REVERSE LENGTH=204
Length = 203
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 187 RIQHDWKLLEKDLPAS-IYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
RIQ + + E++ +S I V D + L I GP GTPY G F DI + YP
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 246 PPSVYYHSGGLRINPNLYN-NGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILN 304
PP + + + +PN+ + +G +CL +L + W+P+ T+ LVSIQAL+
Sbjct: 66 PPKMQFSTKVW--HPNISSQSGAICLDILK-------DQWSPAL-TLKTALVSIQALLSA 115
Query: 305 EKPYFNEPGYASYANSV 321
+P +P A A V
Sbjct: 116 PEP--KDPQDAVVAEQV 130
>AT3G12775.1 | chr3:4059772-4060944 FORWARD LENGTH=363
Length = 362
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 90/229 (39%), Gaps = 69/229 (30%)
Query: 158 FKQFDTVKNFS--DHHYA------ATSGDVTKRDWVKRIQHDWKLLEKDLPA------SI 203
FK+F+ V + DHH+ ++ V V R+ W +LE+ L + S
Sbjct: 93 FKKFEAVDGGAPRDHHFYNYRCCYSSYLCVCASSTVDRL---WGILERGLASREKEGVSF 149
Query: 204 YVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINP--- 260
+VR ++R +L+R A+ H+ L+FFD++F YP PS YYH LR++
Sbjct: 150 FVRTYKERKELMRVAVTVTDCYQNHN-LYFFDLKFPKEYPYQAPSFYYHPYDLRLSTPED 208
Query: 261 NLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGYASYANS 320
K C ++ + V + IQ ++L
Sbjct: 209 QKSLRDKHCYNI-------------------VDVFLHIQEIVL----------------- 232
Query: 321 VSGERIAMEYNDNTFLHSCRTMLYSLRRPPEHFADLVTSHFRERGHTIL 369
N N SC ML L RP F D V +FR++G IL
Sbjct: 233 ---------MNTNK---SCNQMLDILERPLAGFQDFVIGYFRKKGPLIL 269
>AT3G57870.1 | chr3:21428831-21430110 REVERSE LENGTH=161
Length = 160
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 214 LLRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLL 273
+ I G GT + G F + FS YP+ PP + G +PN+Y +G VCLS+L
Sbjct: 41 VWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQG--FFHPNVYPSGTVCLSIL 98
Query: 274 GTWAGSGCETWNPSQSTMLQVLVSIQALILNEKP 307
G W P+ T+ Q+LV IQ L+ P
Sbjct: 99 NEDYG-----WRPA-ITVKQILVGIQDLLDTPNP 126
>AT3G46460.1 | chr3:17096120-17097315 REVERSE LENGTH=167
Length = 166
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 217 AAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTW 276
IIGP T Y G F+ + F +YP +PP+V + S +PN+Y +G+VC+S+L
Sbjct: 39 VTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIW--HPNVYPDGRVCISILHPP 96
Query: 277 AGS------GCETWNPSQSTMLQVLVSIQALI 302
E W P T+ +++SI +++
Sbjct: 97 GDDPSGYELASERWTPVH-TVESIMLSIISML 127
>AT3G55380.2 | chr3:20531520-20532895 FORWARD LENGTH=202
Length = 201
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 217 AAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLL 273
+I+GP T Y G F + F +YP +PP+V + S +PN+Y++GKVC+S+L
Sbjct: 40 VSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSE--MWHPNVYSDGKVCISIL 94
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,231,671
Number of extensions: 363028
Number of successful extensions: 898
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 888
Number of HSP's successfully gapped: 25
Length of query: 485
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 383
Effective length of database: 8,310,137
Effective search space: 3182782471
Effective search space used: 3182782471
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)