Os06g0193000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin conjugating enzyme 2.
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Os06g0193000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin conjugating enzyme 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.73 | 0.161 | 13.3 | 0.0659 | 0.357 | 0.521 | 0.12 | 0.0573 | 0.221 | 5.13 | 20.7 | 862 | -- | -- |
| 11.39 | 0.157 | 13.3 | 0.0221 | 0.306 | 0.485 | 0.158 | -- | 0.213 | 4.35 | 20.6 | 2346 | -- | -- |
| 11.71 | 0.159 | 13.3 | 0.0503 | 0.324 | 0.503 | -- | -0.00342 | 0.222 | 5.04 | 20.83 | 956 | -- | -- |
| 11.43 | 0.157 | 13.3 | 0.0254 | 0.301 | 0.481 | -- | -- | 0.209 | 4.42 | 20.9 | 2376 | -- | -- |
| 15.7 | 0.185 | 13.3 | 0.048 | -- | 0.505 | -- | 0.127 | 0.221 | -- | 20.75 | 2608 | -- | -- |
| 17.93 | 0.199 | 13.2 | 0.206 | 0.327 | -- | 0.224 | -- | 0.317 | 3.5 | -- | -- | -- | -- |
| 18.08 | 0.199 | 13.2 | 0.203 | 0.33 | -- | -- | -- | 0.315 | 3.62 | -- | -- | -- | -- |
| 15.7 | 0.185 | 13.3 | 0.0171 | -- | 0.508 | -- | -- | 0.208 | -- | 20.99 | 2607 | -- | -- |
| 11.44 | 0.158 | 13.3 | -- | 0.3 | 0.491 | -- | -- | 0.204 | 4.42 | 20.71 | 2377 | -- | -- |
| 24.13 | 0.23 | 13.2 | 0.216 | -- | -- | -- | -- | 0.324 | -- | -- | -- | -- | -- |
| 19.17 | 0.205 | 13.2 | -- | 0.334 | -- | -- | -- | 0.293 | 3.62 | -- | -- | -- | -- |
| 15.71 | 0.185 | 13.3 | -- | -- | 0.514 | -- | -- | 0.205 | -- | 20.84 | 2607 | -- | -- |
| 25.37 | 0.235 | 13.2 | -- | -- | -- | -- | -- | 0.3 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.85 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 3 | 10.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 6 | 10.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 13 |
| 12 | 10.94 | temperature | 15 | 270 | > th | dose dependent | sin | 13 | NA |
| 16 | 10.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 26 | 10.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 18 |
| 56 | 11.11 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 92 | 11.18 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 178 | 11.29 | temperature | 30 | 270 | < th | dose dependent | sin | 13 | NA |
| 204 | 11.32 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |
| 222 | 11.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 421 | 11.45 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 481 | 11.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 14 |
| 532 | 11.50 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 679 | 11.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 749 | 11.60 | temperature | 30 | 4320 | < th | dose dependent | sin | 13 | NA |
| 751 | 11.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 873 | 11.64 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 3 |
| 901 | 11.65 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |