BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0167200 Os06g0167200|AK100240
(363 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0167200 Similar to RING-H2 finger protein ATL1R (RING-... 374 e-104
Os02g0743100 Zinc finger, RING-type domain containing protein 188 5e-48
Os06g0233200 Similar to RING-H2 finger protein ATL1R (RING-... 178 6e-45
Os09g0376700 Zinc finger, RING-type domain containing protein 161 9e-40
Os02g0790600 Similar to RING-H2 finger protein ATL1R (RING-... 131 1e-30
Os06g0187300 119 5e-27
Os08g0445000 Similar to RING-H2 finger protein ATL5A 117 1e-26
Os03g0149800 Similar to RING-H2 finger protein ATL1D 92 8e-19
Os02g0820200 Zinc finger, RING-type domain containing protein 82 6e-16
Os09g0468300 Zinc finger, RING-type domain containing protein 81 1e-15
Os02g0832150 Zinc finger, RING-type domain containing protein 79 4e-15
Os03g0188200 Zinc finger, RING-type domain containing protein 79 5e-15
Os08g0484200 Zinc finger, RING-type domain containing protein 78 8e-15
Os06g0695900 Zinc finger, RING-type domain containing protein 78 1e-14
Os03g0391100 76 5e-14
Os02g0572300 75 5e-14
Os02g0557300 Similar to RING-H2 finger protein ATL1G 75 6e-14
Os02g0759400 Zinc finger, RING-type domain containing protein 75 8e-14
Os03g0149700 Zinc finger, RING-type domain containing protein 75 9e-14
Os04g0590900 Similar to RING-H2 finger protein ATL1B 75 1e-13
Os12g0596200 Similar to RING-H2 protein 74 1e-13
Os05g0596500 Similar to RING-H2 finger protein ATL3I (YGHL1... 74 1e-13
Os02g0692000 Similar to RING finger family protein 74 1e-13
Os01g0311100 74 2e-13
Os01g0213400 Zinc finger, RING-type domain containing protein 73 3e-13
Os04g0450400 Zinc finger, RING-type domain containing protein 73 3e-13
Os02g0572200 Similar to RING-H2 finger protein ATL3I (YGHL1... 72 5e-13
Os03g0398600 Zinc finger, RING-type domain containing protein 72 8e-13
Os02g0572350 Zinc finger, RING-type domain containing protein 71 1e-12
Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-... 71 1e-12
Os05g0360400 Zinc finger, RING-type domain containing protein 71 1e-12
AK109940 70 2e-12
Os11g0610600 Similar to RING-H2 finger protein ATL2N 70 3e-12
Os04g0586700 Zinc finger, RING-type domain containing protein 70 3e-12
Os07g0146300 70 3e-12
Os01g0822800 Similar to RING-H2 finger protein ATL3C 69 5e-12
Os02g0559800 E3 ubiquitin ligase EL5 (EC 6.3.2.-) 69 6e-12
Os02g0561400 68 8e-12
Os02g0561000 68 8e-12
Os02g0560600 68 8e-12
Os02g0560200 68 8e-12
Os02g0688800 Zinc finger, RING-type domain containing protein 68 9e-12
Os05g0360300 68 1e-11
Os06g0666500 Zinc finger, RING-type domain containing protein 68 1e-11
Os07g0159400 68 1e-11
Os09g0554200 Zinc finger, RING-type domain containing protein 67 1e-11
Os12g0432600 Zinc finger, RING-type domain containing protein 67 1e-11
Os09g0535500 Similar to RING-H2 finger protein ATL1R (RING-... 67 2e-11
Os01g0212700 Zinc finger, RING-type domain containing protein 67 2e-11
Os10g0574400 Similar to RING finger family protein 67 2e-11
Os01g0830900 67 3e-11
Os12g0620300 65 5e-11
Os01g0866000 Similar to E3 ubiquitin ligase EL5 (EC 6.3.2.-) 65 6e-11
Os08g0563500 65 8e-11
Os05g0164200 Zinc finger, RING-type domain containing protein 65 8e-11
>Os06g0167200 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 363
Score = 374 bits (959), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/363 (60%), Positives = 220/363 (60%)
Query: 1 MMVAGVIRSNQDXXXXXXTVSGAARISPXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXX 60
MMVAGVIRSNQD TVSGAARISP S
Sbjct: 1 MMVAGVIRSNQDGGGGGGTVSGAARISPAVVFVLVILAVVLFVSGLLHLLVRFLLRRGRG 60
Query: 61 XXXXXXXDAEAAEGVEESAXXXXXXXXXXXXDAGLDQDVIDALPVFMYREXXXXXXXXXX 120
DAEAAEGVEESA DAGLDQDVIDALPVFMYRE
Sbjct: 61 RDGGGGGDAEAAEGVEESALQRQLQQLFHLHDAGLDQDVIDALPVFMYREVVVGVGGGGG 120
Query: 121 XXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCRXXXXXXX 180
KEPFDCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCR
Sbjct: 121 AGGGAKEPFDCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCRAALGADA 180
Query: 181 XXXXXXXXXXXXXXXXRKQQEDAVFPVRLGKFKNLSRAVGPVHDRDDXXXXXXXXXXXXX 240
RKQQEDAVFPVRLGKFKNLSRAVGPVHDRDD
Sbjct: 181 AALFDAAFDEMADEEDRKQQEDAVFPVRLGKFKNLSRAVGPVHDRDDAAAAAAGVGVGGG 240
Query: 241 IITREEGESSSSSLDARRCFSMGSYQYVLAEASLQVSVHRRHGDXXXXXXXXXXXXXXXX 300
IITREEGESSSSSLDARRCFSMGSYQYVLAEASLQVSVHRRHGD
Sbjct: 241 IITREEGESSSSSLDARRCFSMGSYQYVLAEASLQVSVHRRHGDGNGRARLRGLAGANPA 300
Query: 301 XXXXXXXXXXXXXXXXXXXXSFSVSKIWQWPRQGKGKLPVLASDDSPAVDGRLPWPRRSP 360
SFSVSKIWQWPRQGKGKLPVLASDDSPAVDGRLPWPRRSP
Sbjct: 301 GNDAAAAADGKKIGAGSKGDSFSVSKIWQWPRQGKGKLPVLASDDSPAVDGRLPWPRRSP 360
Query: 361 GAS 363
GAS
Sbjct: 361 GAS 363
>Os02g0743100 Zinc finger, RING-type domain containing protein
Length = 396
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 141/291 (48%), Gaps = 50/291 (17%)
Query: 92 DAGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCG 151
D+GLDQ IDALPVF YR+ KEPFDCAVCLCEF G+DRLRLLPVCG
Sbjct: 123 DSGLDQAFIDALPVFAYRDIVGGD----------KEPFDCAVCLCEFDGEDRLRLLPVCG 172
Query: 152 HAFHIDCIDTWLLSNSTCPLCRXXXXXXXXXXXXXXXXXXXXXXXRKQQEDA-------- 203
HAFH+ CIDTWLLSNSTCPLCR + E+
Sbjct: 173 HAFHLHCIDTWLLSNSTCPLCRGTLYVPGLTIESLMFDFDERLEEGRLSEECEDGFQSSR 232
Query: 204 ---------------VFPVRLGKFKNL-SRAVGPVHDRDDXXXXXXXXXXXXXIITREEG 247
VFPVRLGKFKN+ + VG V + + I++RE G
Sbjct: 233 QKKPMDEEQTVTEKRVFPVRLGKFKNVGNTGVGGVDNGN-----------AAGIVSREPG 281
Query: 248 ESSSSSLDARRCFSMGSYQYVLAEASLQVSVHRRHGDXXXXXXXXXXXXXXXXXXXXXXX 307
ESSSSSLD RRCFSMG+YQYVL + L+V++ + G
Sbjct: 282 ESSSSSLDTRRCFSMGTYQYVLGASELRVAL--QPGRNKNGVGSRLKGRATGISSVNAEI 339
Query: 308 XXXXXXXXXXXXXSFSVSKIWQWPRQGKGKLPVLASDDSPAVDGRLPWPRR 358
SFS+SKIWQW KGKLP A D+ + PW +R
Sbjct: 340 MEGKRICAKSKGESFSMSKIWQWSNV-KGKLP--AGSDNCSETASFPWMKR 387
>Os06g0233200 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 436
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 140/294 (47%), Gaps = 47/294 (15%)
Query: 92 DAGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCG 151
D+GLDQ IDALPVF YRE KEPFDCAVCLCEF +DRLRLLP+CG
Sbjct: 156 DSGLDQAFIDALPVFAYREIVVGGGGDGD-----KEPFDCAVCLCEFDAEDRLRLLPLCG 210
Query: 152 HAFHIDCIDTWLLSNSTCPLCRXXXXXXXXXXXXXXXXXXXXXXXRKQQEDA-------- 203
HAFH+ CIDTWLLSNSTCPLCR + ED
Sbjct: 211 HAFHLHCIDTWLLSNSTCPLCRGVLFVPGLTENNPMFDFDEGLEEGRLSEDCDNGFGYPG 270
Query: 204 ---------------VFPVRLGKFKNLSRAVGPVHDRDDXXXXXXXXXXXXXIITREEGE 248
VFPVRLGKFKN+ G V ++ REEGE
Sbjct: 271 HKATEGMQTPGTEKRVFPVRLGKFKNVG-TQGAVEG-------GGIGNANGAVLRREEGE 322
Query: 249 SSSSSLDARRCFSMGSYQYVLAEASLQVSVH---RRHGDXXXXXXXXXXXXXXXXXXXXX 305
SSSSSLDARRCFSMG+YQYVL + L+VS+ R+G
Sbjct: 323 SSSSSLDARRCFSMGTYQYVLGTSELRVSLQPDRIRNGG-----GGVTRARPTGLSSVNA 377
Query: 306 XXXXXXXXXXXXXXXSFSVSKIWQWPRQGKGKLPVLASDDSPAVDGRLPWPRRS 359
SFSVSKIWQW KGKLP + + S A G LPW +R
Sbjct: 378 EIMEGKKICARNKGESFSVSKIWQWSNL-KGKLPTGSDECSEA--GSLPWMKRG 428
>Os09g0376700 Zinc finger, RING-type domain containing protein
Length = 392
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 122/285 (42%), Gaps = 46/285 (16%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLDQ IDALP F Y E K FDCAVCLCEF G DRLRLLP+CGHA
Sbjct: 115 GLDQAAIDALPAFTYAELLAGAAAPNGGGGNGKRQFDCAVCLCEFDGGDRLRLLPLCGHA 174
Query: 154 FHIDCIDTWLLSNSTCPLCRXXXXXXXXXXXXXXXXXXXXXXXRKQQE------------ 201
FH CIDTWL S+STCPLCR +Q +
Sbjct: 175 FHAACIDTWLRSSSTCPLCRAALSARALAALAAAAADTPAAAQHRQPDVEDQKLDHHHPP 234
Query: 202 --------DAVFPVRLGKFKNLSRAVGPVHDRDDXXXXXXXXXXXXXIITREEGESSSSS 253
V VRLG+FKN R+ G + S
Sbjct: 235 PPSDEPATSFVLSVRLGRFKNTQRSDGDA----------------------DASGGGSRC 272
Query: 254 LDARRCFSMGSYQYVLAEASLQVSVHRRHGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
+DARRC+SMGSYQYVLA+ +L +SVH R GD
Sbjct: 273 IDARRCYSMGSYQYVLADDNLLISVHWRPGDGISAATAAAAAGANVATARTGIKQGGGGG 332
Query: 314 XXXXXXX---SFSVSKIWQWPRQGKGKLPVLASDDSPAVDGRLPW 355
SFS+SKIWQW R G +LPVL SD SP D LPW
Sbjct: 333 GGKKVFGRGDSFSMSKIWQW-RGGDRRLPVLHSDASPPADDGLPW 376
>Os02g0790600 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 428
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 101/209 (48%), Gaps = 36/209 (17%)
Query: 92 DAGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCG 151
DAG+DQ IDALPVF+YR K+PFDCAVCLCEFA DD+LRLLP C
Sbjct: 90 DAGVDQAFIDALPVFLYRNVVGVGGEDG------KDPFDCAVCLCEFAADDQLRLLPKCS 143
Query: 152 HAFHIDCIDTWLLSNSTCPLCRXXXXXXXXXXXXXXXXXXXXXXXRKQ------------ 199
HAFH++CIDTWLLS+STCPLCR R
Sbjct: 144 HAFHLECIDTWLLSHSTCPLCRRSLLAELSPTCTPVVMVLESESSRDMVHAADDEPADVG 203
Query: 200 QEDA-----VFPVRLGKFK----NLSRAVGPVHDRDDXXXXXXXXXXXXXIITREEGESS 250
EDA V V+LGKF N+ V + D + +
Sbjct: 204 GEDAPGAEEVVEVKLGKFMCVEGNVFFNVNAIAGEGDRAGTSSNGNG--------DANAK 255
Query: 251 SSSLDARRCFSMGSYQYVL-AEASLQVSV 278
+ L RRC SMGSY+YV+ A ASL+VS+
Sbjct: 256 AGGLGQRRCHSMGSYEYVMDAHASLRVSI 284
>Os06g0187300
Length = 444
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 7/82 (8%)
Query: 92 DAGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCG 151
DAG+DQ IDALPVF+YR +PFDCAVCLCEFAGDD+LRLLP CG
Sbjct: 91 DAGVDQTFIDALPVFVYR-------AVVGAGLRKDDPFDCAVCLCEFAGDDKLRLLPTCG 143
Query: 152 HAFHIDCIDTWLLSNSTCPLCR 173
HAFH+ CID WLLS+STCP+CR
Sbjct: 144 HAFHVPCIDAWLLSHSTCPICR 165
>Os08g0445000 Similar to RING-H2 finger protein ATL5A
Length = 501
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 59/82 (71%), Gaps = 9/82 (10%)
Query: 92 DAGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCG 151
DAG+DQ ID LPVF+Y K+PFDCAVCLCEFA DDRLRLLP C
Sbjct: 123 DAGVDQSFIDTLPVFLY---------GAVVGAGRKDPFDCAVCLCEFADDDRLRLLPKCS 173
Query: 152 HAFHIDCIDTWLLSNSTCPLCR 173
HAFH+DCIDTWLLS+STCPLCR
Sbjct: 174 HAFHVDCIDTWLLSHSTCPLCR 195
>Os03g0149800 Similar to RING-H2 finger protein ATL1D
Length = 300
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 93 AGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGH 152
GLD DV+ ALPV YR P +CAVCL EF D+RL+LLP C H
Sbjct: 93 GGLDPDVVAALPVVKYRRAASGKS---------ASPQECAVCLSEFVRDERLKLLPSCSH 143
Query: 153 AFHIDCIDTWLLSNSTCPLCR 173
AFHIDCIDTWL N +CPLCR
Sbjct: 144 AFHIDCIDTWLHHNVSCPLCR 164
>Os02g0820200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GL++ I +LP F YR+ + +CAVC+ EF ++R+RLLP C H
Sbjct: 114 GLEEAAIQSLPAFRYRKAIKDTTA---------DSSECAVCISEFQEEERVRLLPSCLHV 164
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH+DCIDTWL N+ CPLCR
Sbjct: 165 FHVDCIDTWLQGNANCPLCR 184
>Os09g0468300 Zinc finger, RING-type domain containing protein
Length = 392
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLDQ V+ P Y + K +CAVC+ EF D+ LRLLP C H
Sbjct: 96 GLDQSVLATFPTMAYADVKAHKSV--------KGALECAVCISEFDDDETLRLLPKCSHV 147
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH DCIDTWL S++TCP+CR
Sbjct: 148 FHQDCIDTWLASHATCPVCR 167
>Os02g0832150 Zinc finger, RING-type domain containing protein
Length = 217
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GL + IDALP + ++ +CA+CL EFAG + LRLLP CGHA
Sbjct: 107 GLKKKAIDALPTVSF------------ALKQQQQQAECAICLAEFAGGEELRLLPHCGHA 154
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH+ CIDTWL +++TCP CR
Sbjct: 155 FHVSCIDTWLGTHATCPSCR 174
>Os03g0188200 Zinc finger, RING-type domain containing protein
Length = 353
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 95 LDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAF 154
LD++V++A P +Y + P +CAVCL EFA D LR+LP C H F
Sbjct: 104 LDKEVVEAFPTAVYGDVKARMAAKSG-------PLECAVCLAEFADSDELRVLPACCHVF 156
Query: 155 HIDCIDTWLLSNSTCPLCR 173
H DCID WL + TCPLCR
Sbjct: 157 HPDCIDPWLAAAVTCPLCR 175
>Os08g0484200 Zinc finger, RING-type domain containing protein
Length = 413
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD V+ A P Y + K +CAVCL EF D+ LRLLP C HA
Sbjct: 116 GLDPAVLGAFPTMAYADVKAHKAG--------KGALECAVCLSEFDDDETLRLLPRCSHA 167
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH DCID WL S+ TCP+CR
Sbjct: 168 FHADCIDAWLASHVTCPVCR 187
>Os06g0695900 Zinc finger, RING-type domain containing protein
Length = 398
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 11/82 (13%)
Query: 92 DAGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCG 151
++G+D+ V+++LPVF + K +CAVCL F + LRLLP C
Sbjct: 89 NSGVDRAVVESLPVFRF-----------GALRGQKAGLECAVCLGRFEPTEALRLLPKCR 137
Query: 152 HAFHIDCIDTWLLSNSTCPLCR 173
H FH++C+DTWL ++STCPLCR
Sbjct: 138 HGFHVECVDTWLDAHSTCPLCR 159
>Os03g0391100
Length = 417
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 93 AGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFA-GDDRLRLLPVCG 151
AGLD ++ALPV Y + +CAVCL EFA G ++LRLLP C
Sbjct: 122 AGLDVAAMEALPVLTY--------ATARAVKAGRGALECAVCLAEFADGGEKLRLLPGCC 173
Query: 152 HAFHIDCIDTWLLSNSTCPLCR 173
H FH CID WL ++ TCP+CR
Sbjct: 174 HVFHAACIDVWLAAHVTCPVCR 195
>Os02g0572300
Length = 348
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 95 LDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAF 154
LD I ALP+ YR+ +P +CAVCL EF DD LRLLP C HAF
Sbjct: 98 LDAAEIAALPLVSYRDARRHRIGDAR-----GDPLECAVCLLEFEDDDALRLLPACPHAF 152
Query: 155 HIDCIDTWLLSNSTCPLCR 173
H +CI WL + TCPLCR
Sbjct: 153 HPECIGLWLEKHVTCPLCR 171
>Os02g0557300 Similar to RING-H2 finger protein ATL1G
Length = 233
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 12/82 (14%)
Query: 92 DAGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCG 151
+ G+ +++ + LPV +++E C+VCL ++ D+RL+ +P CG
Sbjct: 72 ECGIKKEMREMLPVVVFKESFLIRET------------QCSVCLADYQPDERLQRIPPCG 119
Query: 152 HAFHIDCIDTWLLSNSTCPLCR 173
H FHIDCID WL +N+TCPLCR
Sbjct: 120 HTFHIDCIDHWLSTNTTCPLCR 141
>Os02g0759400 Zinc finger, RING-type domain containing protein
Length = 437
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD V+ P Y E +CAVCL EF D+ LR LP C HA
Sbjct: 118 GLDSSVVRMFPTMKYAEAKALRVGKVAGAA-----LECAVCLSEFEDDEMLRFLPKCSHA 172
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH DCI WL S+ TCP+CR
Sbjct: 173 FHPDCIGQWLASHVTCPVCR 192
>Os03g0149700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 34/44 (77%)
Query: 130 DCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCR 173
+CAVCL EF +R+RLLP C HAFHIDCIDTWL N+ CP CR
Sbjct: 127 ECAVCLSEFVERERVRLLPNCSHAFHIDCIDTWLQGNARCPFCR 170
>Os04g0590900 Similar to RING-H2 finger protein ATL1B
Length = 383
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 93 AGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGH 152
+GLD+ +I+ + V YR DC+VCL EF+ + LRLLP C H
Sbjct: 130 SGLDETLINKITVCKYRRGDGFVHTT-----------DCSVCLGEFSDGESLRLLPRCSH 178
Query: 153 AFHIDCIDTWLLSNSTCPLCR 173
AFH CIDTWL S+S CPLCR
Sbjct: 179 AFHQQCIDTWLKSHSNCPLCR 199
>Os12g0596200 Similar to RING-H2 protein
Length = 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 94 GLDQDVIDALPVFMY-REXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGH 152
GLD I +LP Y + DCAVCL EFA D LR LP+C H
Sbjct: 66 GLDDAAIKSLPSAQYLKSSAMAARGGGGGGGADTAARDCAVCLLEFADGDELRALPLCAH 125
Query: 153 AFHIDCIDTWLLSNSTCPLCR 173
AFH DCID WL ++++CPLCR
Sbjct: 126 AFHADCIDVWLRAHASCPLCR 146
>Os05g0596500 Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion
protein)
Length = 385
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 92 DAGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCG 151
D G+ + VI++LP F + ++ +CAVCL F D LRLLP C
Sbjct: 96 DDGVAKPVIESLPFFRF-----------AALRGARQGLECAVCLARFDDADLLRLLPRCR 144
Query: 152 HAFHIDCIDTWLLSNSTCPLCR 173
HAFH+DC+D WL S ++CPLCR
Sbjct: 145 HAFHLDCVDRWLESKASCPLCR 166
>Os02g0692000 Similar to RING finger family protein
Length = 389
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
G+D+ +I+ + V YR + DC+VCL EF + LRLLP C HA
Sbjct: 138 GMDETLINKITVCKYRRGDGFV-----------DSTDCSVCLGEFREGESLRLLPKCSHA 186
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH+ CIDTWL S+S CPLCR
Sbjct: 187 FHVPCIDTWLKSHSNCPLCR 206
>Os01g0311100
Length = 249
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 32/44 (72%)
Query: 130 DCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCR 173
DCAVCL EF D+ R LP CGH FH++CID W NSTCPLCR
Sbjct: 146 DCAVCLAEFEAGDKARALPRCGHRFHVECIDAWFRENSTCPLCR 189
>Os01g0213400 Zinc finger, RING-type domain containing protein
Length = 237
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXX--KEPFDCAVCLCEFAGDDRLRLLPVCG 151
GLD + ALPV YR+ DCAVCL E A +++R LP C
Sbjct: 90 GLDASALAALPVTAYRKNGGGGGGGEGSNRGGPGATAADCAVCLSELADGEKVRELPNCR 149
Query: 152 HAFHIDCIDTWLLSNSTCPLCR 173
H FH++C+D WL S +TCPLCR
Sbjct: 150 HVFHVECVDAWLRSRTTCPLCR 171
>Os04g0450400 Zinc finger, RING-type domain containing protein
Length = 415
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD+ ID++ YR DC+VCL EF + +RLLP CGHA
Sbjct: 176 GLDEAAIDSIAATRYRAGAGLLGAA-----------DCSVCLGEFQDGELVRLLPKCGHA 224
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH+ CIDTWL ++ CPLCR
Sbjct: 225 FHVPCIDTWLRAHVNCPLCR 244
>Os02g0572200 Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion
protein)
Length = 349
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD + A+PV Y E +CAVCL F D LRLLP C HA
Sbjct: 93 GLDPAAVAAIPVVPYAEVRKHRSGGGGA-------LECAVCLTVFDDGDDLRLLPQCSHA 145
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH DCID WL + TCPLCR
Sbjct: 146 FHPDCIDPWLEGHVTCPLCR 165
>Os03g0398600 Zinc finger, RING-type domain containing protein
Length = 267
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 130 DCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCR 173
DCAVC+ E A + R+LP CGH FH++C+D WL SNSTCPLCR
Sbjct: 90 DCAVCITELAAGESARVLPRCGHGFHVECVDMWLRSNSTCPLCR 133
>Os02g0572350 Zinc finger, RING-type domain containing protein
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 11/80 (13%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD+ I+++ + YR DC VCL EF + LRLLP CGHA
Sbjct: 83 GLDEAAIESIALARYRAGAGMLGAT-----------DCPVCLGEFRDGELLRLLPKCGHA 131
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH+ CID WL ++ CPLCR
Sbjct: 132 FHVPCIDAWLRAHVNCPLCR 151
>Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GL + ALPV +Y + +E +CAVCL E A +++R+LP C H
Sbjct: 84 GLPAAALRALPVTVYAKPAAARG---------EEALECAVCLSEVADGEKVRMLPKCDHG 134
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH++CID W S+ TCPLCR
Sbjct: 135 FHVECIDMWFHSHDTCPLCR 154
>Os05g0360400 Zinc finger, RING-type domain containing protein
Length = 200
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 97 QDVIDALPVFMYREXXXXX-XXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAFH 155
+D+ +LPVF+Y +CAVC+ EF DR RLLP CGH FH
Sbjct: 98 EDIASSLPVFVYSSSAAAPDVGDAGGNGKAAAAAECAVCIVEFRDGDRARLLPRCGHRFH 157
Query: 156 IDCIDTWLLSNSTCPLCR 173
DCI WL +STCPLCR
Sbjct: 158 ADCIGAWLQLHSTCPLCR 175
>AK109940
Length = 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 11/80 (13%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD+ I+++ + YR DC VCL EF + LRLLP CGHA
Sbjct: 131 GLDEAAIESIALARYRAGAGMLGAT-----------DCPVCLGEFRDGELLRLLPKCGHA 179
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH+ CID WL ++ CPLCR
Sbjct: 180 FHVPCIDAWLRAHVNCPLCR 199
>Os11g0610600 Similar to RING-H2 finger protein ATL2N
Length = 405
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 40/80 (50%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD+ I A+ +Y CAVCL EF + LRLLP C HA
Sbjct: 185 GLDERAIAAITALVYDAKKTGGGIGLAGGGGGGGGGSCAVCLTEFRDGETLRLLPRCRHA 244
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH CIDTWL ++ CPLCR
Sbjct: 245 FHRGCIDTWLRAHVNCPLCR 264
>Os04g0586700 Zinc finger, RING-type domain containing protein
Length = 359
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 97 QDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAFHI 156
Q +I++LP+F K DCAVCL F D LRLLP C HAFH
Sbjct: 103 QRLIESLPLFTM---------ASSLAALPKSSPDCAVCLSPFTLDAELRLLPACRHAFHA 153
Query: 157 DCIDTWLLSNSTCPLCR 173
C+D WL + +CPLCR
Sbjct: 154 ACVDAWLRTTPSCPLCR 170
>Os07g0146300
Length = 209
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 95 LDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAF 154
+D DV+ +LPV +Y + +C VCL E D R LP CGH F
Sbjct: 76 VDPDVLRSLPVTVYSRSTTAAAAKEEE----DDGVECVVCLAELEEGDEARFLPRCGHGF 131
Query: 155 HIDCIDTWLLSNSTCPLCR 173
H +C+D W+ S+STCPLCR
Sbjct: 132 HAECVDMWVGSHSTCPLCR 150
>Os01g0822800 Similar to RING-H2 finger protein ATL3C
Length = 208
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 131 CAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCR 173
CA+CL EFA +++R+LP CGH FH+ C+DTWL+S+ +CP CR
Sbjct: 124 CAICLGEFADGEKVRVLPRCGHGFHVRCVDTWLVSHDSCPTCR 166
>Os02g0559800 E3 ubiquitin ligase EL5 (EC 6.3.2.-)
Length = 325
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 95 LDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAF 154
+D +V+ +LPV +Y +CAVCL E + R LP CGH F
Sbjct: 99 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDG-VECAVCLAELEDGEEARFLPRCGHGF 157
Query: 155 HIDCIDTWLLSNSTCPLCR 173
H +C+D WL S+STCPLCR
Sbjct: 158 HAECVDMWLGSHSTCPLCR 176
>Os02g0561400
Length = 314
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 95 LDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAF 154
+D +V+ +LPV +Y +CAVCL E + R LP CGH F
Sbjct: 88 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDG-VECAVCLAELEDGEEARFLPRCGHGF 146
Query: 155 HIDCIDTWLLSNSTCPLCR 173
H +C+D WL S+STCPLCR
Sbjct: 147 HAECVDMWLGSHSTCPLCR 165
>Os02g0561000
Length = 314
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 95 LDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAF 154
+D +V+ +LPV +Y +CAVCL E + R LP CGH F
Sbjct: 88 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDG-VECAVCLAELEDGEEARFLPRCGHGF 146
Query: 155 HIDCIDTWLLSNSTCPLCR 173
H +C+D WL S+STCPLCR
Sbjct: 147 HAECVDMWLGSHSTCPLCR 165
>Os02g0560600
Length = 314
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 95 LDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAF 154
+D +V+ +LPV +Y +CAVCL E + R LP CGH F
Sbjct: 88 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDG-VECAVCLAELEDGEEARFLPRCGHGF 146
Query: 155 HIDCIDTWLLSNSTCPLCR 173
H +C+D WL S+STCPLCR
Sbjct: 147 HAECVDMWLGSHSTCPLCR 165
>Os02g0560200
Length = 314
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 95 LDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAF 154
+D +V+ +LPV +Y +CAVCL E + R LP CGH F
Sbjct: 88 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDG-VECAVCLAELEDGEEARFLPRCGHGF 146
Query: 155 HIDCIDTWLLSNSTCPLCR 173
H +C+D WL S+STCPLCR
Sbjct: 147 HAECVDMWLGSHSTCPLCR 165
>Os02g0688800 Zinc finger, RING-type domain containing protein
Length = 373
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 130 DCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCR 173
DCAVCL FA + LRLLP C HAFH C+D WL + +CPLCR
Sbjct: 148 DCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSCPLCR 191
>Os05g0360300
Length = 199
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 96 DQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHAFH 155
++D+ +LPV +Y K +CAVC+ EF D RLLP CGH FH
Sbjct: 99 EEDIASSLPVSVYSSADVGNG---------KAAAECAVCIVEFRDGDLARLLPRCGHRFH 149
Query: 156 IDCIDTWLLSNSTCPLCR 173
DC+ WL +STCPLCR
Sbjct: 150 ADCVGAWLRLHSTCPLCR 167
>Os06g0666500 Zinc finger, RING-type domain containing protein
Length = 181
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 93 AGLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGH 152
AGL ++ + ALPV Y CA+CL +FA +R+RLLP CGH
Sbjct: 85 AGLKREDVVALPVATY------------VASPAPSVAGCAICLSDFADGERVRLLPACGH 132
Query: 153 AFHIDCIDTWLLSNSTCPLCR 173
FH+ CID WLL++ +CP CR
Sbjct: 133 RFHVVCIDRWLLAHCSCPTCR 153
>Os07g0159400
Length = 177
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
G+D+ + ALP+ +Y E CAVCL + G D LR LP CGH
Sbjct: 80 GIDEATLQALPLVLYGEARTAQT-------------SCAVCLESYGGGDVLRALPECGHL 126
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH DCI TWL TCP+CR
Sbjct: 127 FHRDCIFTWLRRRPTCPVCR 146
>Os09g0554200 Zinc finger, RING-type domain containing protein
Length = 201
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 130 DCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCR 173
+CA+CL EFA D +R+LP CGH FH C+D WL+S STCP CR
Sbjct: 105 ECAICLAEFARGDEVRVLPPCGHGFHAACVDVWLVSTSTCPSCR 148
>Os12g0432600 Zinc finger, RING-type domain containing protein
Length = 185
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GL Q+ I+A+P F YR CAVC+ D +R LP CGHA
Sbjct: 97 GLSQEDIEAIPAFEYRRGSSGSGVA-----------QCAVCIAAVKDGDTVRRLPACGHA 145
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH C+D WL ++TCP+CR
Sbjct: 146 FHAPCVDGWLRDHATCPMCR 165
>Os09g0535500 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 217
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 130 DCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNS-TCPLCR 173
DCAVCL E+A D +R+LP CGH FH +C+D WLL+ + TCP+CR
Sbjct: 123 DCAVCLAEYAAGDEVRVLPACGHGFHRECVDRWLLTRAPTCPVCR 167
>Os01g0212700 Zinc finger, RING-type domain containing protein
Length = 185
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
G+ I ALP F Y DCAVCL + +++R LP CGH
Sbjct: 73 GMSAAAIAALPTFGYEASAAA-----------AAALDCAVCLGQVDAGEKVRQLPKCGHL 121
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH +C+D WL ++STCP+CR
Sbjct: 122 FHAECVDAWLRAHSTCPMCR 141
>Os10g0574400 Similar to RING finger family protein
Length = 197
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 14/80 (17%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD ++ + P ++ +CAVCL +FA D LRLL VC HA
Sbjct: 100 GLDPAILASFPTLRFKASAAAP--------------ECAVCLSDFAAGDALRLLTVCRHA 145
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH CID+WL +++TCP+CR
Sbjct: 146 FHTPCIDSWLRAHTTCPVCR 165
>Os01g0830900
Length = 189
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD I ++PV +YR C++CL EF ++++ LP+CGH
Sbjct: 95 GLDDATIASMPVALYRAVASAAGDGDDGGAA-----QCSICLGEFEEGEKVKALPLCGHG 149
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH +C+D WL S +CPLCR
Sbjct: 150 FHPECVDAWLRSRPSCPLCR 169
>Os12g0620300
Length = 121
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD+ I ALP +Y CAVCL E+ G D LR+L C H+
Sbjct: 45 GLDEAAIKALPKVVYGTAAAAES-------------SCAVCLGEYGGGDELRVLSWCAHS 91
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH C+D WL N TCP+CR
Sbjct: 92 FHRHCVDPWLRLNPTCPVCR 111
>Os01g0866000 Similar to E3 ubiquitin ligase EL5 (EC 6.3.2.-)
Length = 213
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 130 DCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCR 173
+CA+CL EFA R+R+LP CGH FH CID WL + TCP CR
Sbjct: 144 ECAICLSEFAQGHRVRVLPRCGHGFHARCIDRWLAARQTCPTCR 187
>Os08g0563500
Length = 241
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 131 CAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCR 173
C VCL EF +RLR LP C H+FHIDCID WL + TCPLCR
Sbjct: 96 CGVCLGEFREGERLRRLPPCLHSFHIDCIDAWLATALTCPLCR 138
>Os05g0164200 Zinc finger, RING-type domain containing protein
Length = 178
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 94 GLDQDVIDALPVFMYREXXXXXXXXXXXXXXXKEPFDCAVCLCEFAGDDRLRLLPVCGHA 153
GLD + ALPVF + CAVCL E + RLLP C H
Sbjct: 83 GLDAKQLGALPVFTWGSSSPATAAA-------DAAVQCAVCLGEMEDGELGRLLPACRHV 135
Query: 154 FHIDCIDTWLLSNSTCPLCR 173
FH +CIDTWL +STCP+CR
Sbjct: 136 FHAECIDTWLAVSSTCPVCR 155
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,513,674
Number of extensions: 202403
Number of successful extensions: 879
Number of sequences better than 1.0e-10: 75
Number of HSP's gapped: 882
Number of HSP's successfully gapped: 77
Length of query: 363
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 261
Effective length of database: 11,709,973
Effective search space: 3056302953
Effective search space used: 3056302953
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)