BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0519400 Os05g0519400|AK072976
(743 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0519400 Similar to N-ethylmaleimide sensitive factor N... 1439 0.0
Os03g0151800 Similar to Cell division control protein 48 ho... 177 3e-44
AK109969 175 1e-43
AK119311 163 5e-40
Os08g0413000 Similar to Valosin-containing protein (Fragment) 160 4e-39
Os04g0617600 Similar to Cdc48 cell division control protein... 150 3e-36
Os02g0205300 Similar to TAT-binding protein homolog (Fragment) 149 7e-36
Os06g0600100 Similar to TAT-binding protein homolog (Fragment) 147 2e-35
Os09g0515100 Similar to Cdc48 cell division control protein... 147 3e-35
Os02g0803700 Similar to 26S protease regulatory subunit 6A ... 143 4e-34
Os06g0173100 Similar to 26S protease regulatory subunit 6A ... 143 5e-34
AK119842 142 1e-33
Os04g0284600 Similar to TAT-binding protein 1 (Fragment) 140 3e-33
Os02g0199900 Similar to 26S proteasome regulatory complex s... 139 5e-33
Os06g0607800 Similar to 26S proteasome regulatory complex s... 139 6e-33
Os02g0784700 Similar to 26S protease regulatory subunit 7 (... 136 7e-32
Os06g0669400 Similar to FtsH protease (VAR2) (Zinc dependen... 135 2e-31
Os06g0192600 26S proteasome regulatory particle triple-A AT... 134 3e-31
AK110388 132 8e-31
Os06g0725900 Similar to Cell division protein ftsH homolog,... 132 8e-31
Os07g0691800 Similar to 26S proteasome subunit 4-like prote... 132 1e-30
Os06g0109400 AAA ATPase domain containing protein 131 2e-30
Os03g0298400 Similar to 26S proteasome subunit 4-like prote... 131 2e-30
Os01g0842600 Similar to AAA-metalloprotease FtsH 130 4e-30
Os05g0458400 Similar to AAA-metalloprotease FtsH 129 7e-30
Os04g0498800 Similar to Cell division control protein 48 ho... 127 4e-29
AK110158 126 6e-29
AK110513 126 7e-29
Os02g0325100 Similar to 26S protease regulatory subunit 6B ... 125 1e-28
Os05g0376200 Similar to Cell division control protein 48 ho... 123 6e-28
Os02g0649700 Peptidase M41, FtsH extracellular domain conta... 119 6e-27
Os01g0574500 Peptidase M41, FtsH domain containing protein 119 8e-27
Os06g0229066 Twin-arginine translocation pathway signal dom... 117 3e-26
Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.... 115 1e-25
Os01g0683100 Similar to Katanin p60 ATPase-containing subun... 102 1e-21
Os06g0225900 AAA ATPase domain containing protein 101 3e-21
Os06g0130000 Similar to Tobacco mosaic virus helicase domai... 100 5e-21
Os09g0560200 Similar to 26S protease regulatory subunit 6B ... 99 1e-20
Os10g0442600 Similar to Cell division control protein 48 ho... 97 4e-20
Os01g0673500 Similar to Katanin p60 ATPase-containing subun... 95 2e-19
Os05g0584600 AAA ATPase domain containing protein 94 4e-19
Os01g0226400 AAA ATPase domain containing protein 93 6e-19
Os01g0141300 92 2e-18
Os01g0757400 Similar to Katanin p60 ATPase-containing subun... 91 2e-18
Os07g0672500 SMAD/FHA domain containing protein 91 3e-18
Os03g0344700 AAA ATPase domain containing protein 86 1e-16
Os06g0714500 AAA ATPase domain containing protein 84 4e-16
Os02g0740300 AAA ATPase domain containing protein 78 2e-14
Os01g0623500 AAA ATPase domain containing protein 74 4e-13
Os11g0661400 AAA ATPase, central region domain containing p... 71 3e-12
>Os05g0519400 Similar to N-ethylmaleimide sensitive factor NSF (Fragment)
Length = 743
Score = 1439 bits (3724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/743 (95%), Positives = 708/743 (95%)
Query: 1 MAGRNYHXXXXXXXXXMSMVVASTPGQELALTNCAYVSSADIRRFPNALALVGDAFVFTL 60
MAGRNYH MSMVVASTPGQELALTNCAYVSSADIRRFPNALALVGDAFVFTL
Sbjct: 1 MAGRNYHGYGGGGGGGMSMVVASTPGQELALTNCAYVSSADIRRFPNALALVGDAFVFTL 60
Query: 61 RAHDAVSAGSIALNAIQRRQTKVSAGDSITVSSFAPPDDFKLALLTLELEYTKARTNRNE 120
RAHDAVSAGSIALNAIQRRQTKVSAGDSITVSSFAPPDDFKLALLTLELEYTKARTNRNE
Sbjct: 61 RAHDAVSAGSIALNAIQRRQTKVSAGDSITVSSFAPPDDFKLALLTLELEYTKARTNRNE 120
Query: 121 ELDAVVLAQQLRRRFLDQVMTSGQRVPFEFCGTNYIFTVNQALLDGQENSTPLDRGFLSS 180
ELDAVVLAQQLRRRFLDQVMTSGQRVPFEFCGTNYIFTVNQALLDGQENSTPLDRGFLSS
Sbjct: 121 ELDAVVLAQQLRRRFLDQVMTSGQRVPFEFCGTNYIFTVNQALLDGQENSTPLDRGFLSS 180
Query: 181 DTYIIFEAAPNSGIKVVNQKEAASSKLFKHKEFNLEKLGIGGLSAEFTDIFRRAFASRVF 240
DTYIIFEAAPNSGIKVVNQKEAASSKLFKHKEFNLEKLGIGGLSAEFTDIFRRAFASRVF
Sbjct: 181 DTYIIFEAAPNSGIKVVNQKEAASSKLFKHKEFNLEKLGIGGLSAEFTDIFRRAFASRVF 240
Query: 241 PPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEK 300
PPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEK
Sbjct: 241 PPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEK 300
Query: 301 NVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG 360
NVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG
Sbjct: 301 NVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDG 360
Query: 361 VEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFL 420
VEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFL
Sbjct: 361 VEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFL 420
Query: 421 SPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVTMDDFVN 480
SPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVTMDDFVN
Sbjct: 421 SPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVTMDDFVN 480
Query: 481 ALHEITPAFGASTDDLERCRLRGMVDCGKAHRHLYERGMLLVEQVKVSKGSPLVTCLLEG 540
ALHEITPAFGASTDDLERCRLRGMVDCGKAHRHLYERGMLLVEQVKVSKGSPLVTCLLEG
Sbjct: 481 ALHEITPAFGASTDDLERCRLRGMVDCGKAHRHLYERGMLLVEQVKVSKGSPLVTCLLEG 540
Query: 541 PAGSGKSALAATVGIDSDFAYVKIISAETMIGFSESSKCAQICKVFEDAYKSQFGXXXXX 600
PAGSGKSALAATVGIDSDFAYVKIISAETMIGFSESSKCAQICKVFEDAYKSQFG
Sbjct: 541 PAGSGKSALAATVGIDSDFAYVKIISAETMIGFSESSKCAQICKVFEDAYKSQFGIIILD 600
Query: 601 XXXXXXXYVAIGPRFSNIISQTLLVLLKRVPPKGKNLLVIGTTSEVGFLESIGMCDVFSV 660
YVAIGPRFSNIISQTLLVLLKRVPPKGKNLLVIGTTSEVGFLESIGMCDVFSV
Sbjct: 601 DIERLLEYVAIGPRFSNIISQTLLVLLKRVPPKGKNLLVIGTTSEVGFLESIGMCDVFSV 660
Query: 661 TYHVPKLKKEDATKVLRHLNVFXXXXXXXXXXXXXXMPIKKLYTLVEMAAQGPSGGSAEA 720
TYHVPKLKKEDATKVLRHLNVF MPIKKLYTLVEMAAQGPSGGSAEA
Sbjct: 661 TYHVPKLKKEDATKVLRHLNVFDEADIDAAAEALDDMPIKKLYTLVEMAAQGPSGGSAEA 720
Query: 721 VYGGEEKIDINHFFSILSDIIRY 743
VYGGEEKIDINHFFSILSDIIRY
Sbjct: 721 VYGGEEKIDINHFFSILSDIIRY 743
>Os03g0151800 Similar to Cell division control protein 48 homolog A (AtCDC48a)
Length = 809
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 217/434 (50%), Gaps = 32/434 (7%)
Query: 173 LDRGFLSSDTYIIFEAAPNSGIKVVNQKE--AASSKLFKHKEFNLEKLG---IGGLSAEF 227
L RG + S + + E P V E + + E L+++G +GG+ +
Sbjct: 160 LVRGGMRSVEFKVIETDPAEYCIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQM 219
Query: 228 TDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNG 287
I R + P + +G+K KGILLYGPPG+GKTL+AR + G ++NG
Sbjct: 220 AQI-RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE-TGAFFFLING 277
Query: 288 PEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVH 347
PE++SK GE+E N+R F +AE + + +I DEID+I R T V
Sbjct: 278 PEIMSKLAGESESNLRKAFEEAEKNAPS--------IIFIDEIDSIAPKREKTH--GEVE 327
Query: 348 DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQIL 407
IV+QLLT +DG++A ++V+++G TNR + +D AL R GR + I+I +PDE GRL++L
Sbjct: 328 RRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVL 387
Query: 408 QIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLT-KPL 466
+IHT MK L+ +V+L+ +A T Y GA+L + A + ++ + DL + +
Sbjct: 388 RIHTKNMK----LAEDVDLEHIAKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETI 443
Query: 467 DEE---SIKVTMDDFVNALHEITP-AFGASTDDLERCRLRGMVDCGKAHRHLYERGMLLV 522
D E S+ VT D F AL P A + ++ + R L E V
Sbjct: 444 DAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPV 503
Query: 523 EQVKVSKG---SPLVTCLLEGPAGSGKSALAATVGIDSDFAYVKIISAETM-IGFSESSK 578
E + + SP L GP G GK+ LA + + ++ + E + + F ES
Sbjct: 504 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE- 562
Query: 579 CAQICKVFEDAYKS 592
A + ++F+ A +S
Sbjct: 563 -ANVREIFDKARQS 575
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 154/279 (55%), Gaps = 21/279 (7%)
Query: 214 NLEKLGIGGLSAEFTDIFRRAFASRVFP---PHVVNKLGIKHVKGILLYGPPGTGKTLMA 270
N+ IGGL ++ R + +P P K G+ KG+L YGPPG GKTL+A
Sbjct: 479 NVSWEDIGGLE----NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 534
Query: 271 RQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEI 330
+ I N V GPE+L+ + GE+E NVR++F A QS V+ FDE+
Sbjct: 535 KAIANECQANFIS-VKGPELLTMWFGESEANVREIFDKAR--------QSAPCVLFFDEL 585
Query: 331 DAICKSRGST-RDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRL 389
D+I RGS+ D G D ++NQLLT++DG+ A V +IG TNR D++D ALLRPGRL
Sbjct: 586 DSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRL 645
Query: 390 EVHIEINLPDENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAV 449
+ I I LPD+ RLQI + K S ++ +V+L LA T+ +SGA++ + + A
Sbjct: 646 DQLIYIPLPDDQSRLQIFKACLRK----SPVAKDVDLNALAKYTQGFSGADITEICQRAC 701
Query: 450 SYALNRQISMDDLTKPLDEESIKVTMDDFVNALHEITPA 488
YA+ I D + +++ + +D V+ + EI A
Sbjct: 702 KYAIRENIEKDIEMEKRRKDNPEAMEEDEVDDIAEIKAA 740
>AK109969
Length = 882
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 206/395 (52%), Gaps = 38/395 (9%)
Query: 211 KEFNLEKLG---IGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKT 267
+E NL +G IGG + I R + P + +GIK +G+L+YGPPGTGKT
Sbjct: 251 EEANLADVGYDDIGGCRKQMAQI-REMVELPLRHPQLFKSIGIKPPRGVLMYGPPGTGKT 309
Query: 268 LMARQIGKLLNGNEPK----IVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLH 323
LMAR + NE + ++NGPE++SK GE+E N+R F +AE +
Sbjct: 310 LMARAVA-----NETRAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPA-------- 356
Query: 324 VIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEAL 383
+I DEID+I R T V +V+QLLT +DG++A +N++++ TNR + +D AL
Sbjct: 357 IIYIDEIDSIAPKREKT--NGEVERRVVSQLLTLMDGLKARSNIVVMAATNRPNSIDPAL 414
Query: 384 LRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEG 443
R GR + ++I +PD GRL+IL+IHT MK L+ +V+L+++AA T Y G+++
Sbjct: 415 RRFGRFDREVDIAIPDPTGRLEILRIHTKNMK----LAEDVDLEQIAAETHGYVGSDVAA 470
Query: 444 VVKSAVSYALNRQISMDDLTK-PLDEE---SIKVTMDDFVNALHEITP-AFGASTDDLER 498
+ A + ++ + DL + +D E S+ VTM++F AL P A + ++
Sbjct: 471 LCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSALRETVVEVPT 530
Query: 499 CRLRGMVDCGKAHRHLYERGMLLVEQVK--VSKG-SPLVTCLLEGPAGSGKSALAATVGI 555
+ K + L E VE + + G +P L GP G+GK+ LA +
Sbjct: 531 TTWNDIGGLEKVKQELQETVSYPVEHPEKFLKYGMAPSKGVLFYGPPGTGKTLLAKAIAN 590
Query: 556 DSDFAYVKIISAETM-IGFSESSKCAQICKVFEDA 589
+ ++ I E + + F ES A + VF+ A
Sbjct: 591 ECQANFISIKGPELLTMWFGESE--ANVRDVFDKA 623
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 127/220 (57%), Gaps = 14/220 (6%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKN 301
P K G+ KG+L YGPPGTGKTL+A+ I N I GPE+L+ + GE+E N
Sbjct: 557 PEKFLKYGMAPSKGVLFYGPPGTGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 615
Query: 302 VRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS-IVNQLLTKIDG 360
VRD+F A V+ FDE+DAI K+RGS+ +G ++NQ+LT++DG
Sbjct: 616 VRDVFDKARAAAPC--------VMFFDELDAIAKARGSSSGDSGGAGDRVINQILTEMDG 667
Query: 361 VEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFL 420
V + NV +IG TNR D +D A+LRPGRL+ I I LPDE RL IL+ K S +
Sbjct: 668 VSSRKNVFIIGATNRPDQIDPAILRPGRLDQLIYIPLPDEPSRLSILKATLKK----SPI 723
Query: 421 SPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMD 460
+ +V+L LA T +SGA+L + + A A+ I D
Sbjct: 724 AADVDLTFLAKHTHGFSGADLAEICQRAAKLAIRESIEAD 763
>AK119311
Length = 805
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 189/362 (52%), Gaps = 36/362 (9%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKN 301
P + +G+K +GILLYGPPGTGKTL+AR + G ++NGPE++SK GE+E N
Sbjct: 225 PSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANE-TGAFFFLINGPEIMSKLAGESESN 283
Query: 302 VRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 361
+R F +A D++ +I DE+DAI R T V IV+QLLT +DG+
Sbjct: 284 LRKAFEEA--------DKNSPSIIFIDELDAIAPKREKTH--GEVERRIVSQLLTLMDGL 333
Query: 362 EALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLS 421
+ ++V+++ TNR + +D AL R GR + I+I +PD GRL+IL+IHT MK L+
Sbjct: 334 KQSSHVIVMAATNRPNSIDGALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK----LA 389
Query: 422 PNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLT-KPLDEE---SIKVTMDD 477
+V+L+++AA T + GA+L + + + ++ + DL +D E S+ VTM++
Sbjct: 390 DDVDLEQIAAETHGHVGADLASLCSESALQQIREKMDLIDLEDDQIDAEVLNSLAVTMEN 449
Query: 478 FVNALHEITP-AFGASTDDLERCRLRGMVDCGKAHRHLYERGMLLVEQ--------VKVS 528
F A+ + +P A + ++ + R L E VE ++ S
Sbjct: 450 FRYAMGKSSPSALRETVVEVPNATWADVGGLENVKRELQELVQYPVEHPDKFLKFGMQPS 509
Query: 529 KGSPLVTCLLEGPAGSGKSALAATVGIDSDFAYVKIISAETM-IGFSESSKCAQICKVFE 587
+G L GP G GK LA + + ++ + E + + F ES A + VF+
Sbjct: 510 RG-----VLFYGPPGCGKMLLAKAIANECQANFISVKGPELLTMWFGESE--ANVRDVFD 562
Query: 588 DA 589
A
Sbjct: 563 KA 564
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 143/246 (58%), Gaps = 18/246 (7%)
Query: 247 KLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLF 306
K G++ +G+L YGPPG GK L+A+ I N V GPE+L+ + GE+E NVRD+F
Sbjct: 503 KFGMQPSRGVLFYGPPGCGKMLLAKAIANECQANFIS-VKGPELLTMWFGESEANVRDVF 561
Query: 307 ADAENDQKTRGDQSDLHVIIFDEIDAICKSRG-STRDGTGVHDSIVNQLLTKIDGVEALN 365
A + V+ FDE+D+I KSRG + D G D ++NQ+LT++DG+ A
Sbjct: 562 DKARSAAPC--------VLFFDELDSIAKSRGGNVGDAGGAADRVINQILTEMDGMGAKK 613
Query: 366 NVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPNVN 425
NV +IG TNR D++D A+LRPGRL+ I I LPDE R I + + K S ++ +V+
Sbjct: 614 NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIFRANMRK----SPVADDVD 669
Query: 426 LQELAARTKNYSGAELEGVVKSAVSYALNRQISMD---DLTKPLDEESIKVTMDDFVNAL 482
L +A T +SGA+L V + A A+ + I + + + ++ + K+ MD+ + +
Sbjct: 670 LAYIAKVTHGFSGADLTEVCQRACKLAIRQSIDAEIRRERERATNQNAAKMEMDE-EDPV 728
Query: 483 HEITPA 488
EIT A
Sbjct: 729 PEITRA 734
>Os08g0413000 Similar to Valosin-containing protein (Fragment)
Length = 848
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 16/265 (6%)
Query: 220 IGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNG 279
IGGL E + V P + + G+ +G+L YGPPG GKT+MA+ I K
Sbjct: 491 IGGL-GEVKRELQETVQYPVEHPEMFDLFGMSPSRGVLFYGPPGCGKTMMAKAIAKECKA 549
Query: 280 NEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRG- 338
N I GPE+L+ + GE+E NVR+LF A QS ++ FDE+D+I RG
Sbjct: 550 NFISI-KGPELLTMWFGESEGNVRNLFDKAR--------QSAPCILFFDELDSIAVKRGN 600
Query: 339 STRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLP 398
S D G D ++NQLLT++DG+ A V +IG TNR D++D A+LRPGRL+ I I LP
Sbjct: 601 SVGDAGGTPDRVLNQLLTEMDGINAKKTVFVIGATNRPDIIDPAMLRPGRLDQLIYIPLP 660
Query: 399 DENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQIS 458
D + RL+I + + K + +S +V+L +AA T +SGA+++ + + A A+ +
Sbjct: 661 DASSRLEIFRANLRK----APMSRHVDLPAMAASTDGFSGADIKEICQRACKLAVREVVQ 716
Query: 459 MDDLT-KPLDEESIKVTMDDFVNAL 482
L K L ++T+D F +A+
Sbjct: 717 KSTLVGKALAMAGAELTVDHFKSAM 741
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 216/441 (48%), Gaps = 43/441 (9%)
Query: 173 LDRGFLSSDTYIIFEAAPNSGIKVVNQKEAASSKLF--------KHKEFNLEKLG---IG 221
L RG + + + + + PN+ +V A +++F + E L+ G +G
Sbjct: 163 LVRGHMHAVEFKVMDTEPNNEPVIV----AGDTEIFCDEGDPVKREDEERLDGPGYDDVG 218
Query: 222 GLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNE 281
G+ + I R + P + LG++ KGILLYGPPGTGKTL+AR I +G
Sbjct: 219 GVRKQLAQI-RELVELPLRHPKLFQTLGVRPPKGILLYGPPGTGKTLLARAIAAE-SGAH 276
Query: 282 PKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTR 341
+VNGPE++S GE+E N+R +FA+A+ + ++ DEID+I SR
Sbjct: 277 FVVVNGPEIMSGMPGESEANLRAVFAEADAAAPS--------IVFMDEIDSIAPSREKAH 328
Query: 342 DGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDEN 401
V +V+QLLT +DG+ V++IG TNR + LD AL R GR + ++I +PDE
Sbjct: 329 --GEVERRVVSQLLTLMDGLRPRAQVIVIGATNRPNSLDPALRRFGRFDRELDIGVPDEL 386
Query: 402 GRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDD 461
GRL+IL+IHT M LS +V+L+ + T + G++L + A + ++ + D
Sbjct: 387 GRLEILRIHTKNMP----LSDDVDLERVGKDTHGFVGSDLASLCSEAAMQCIREKLDIID 442
Query: 462 L-TKPLDEE---SIKVTMDDFVNALHEITPAFGASTDDLE--RCRLRGMVDCGKAHRHLY 515
+ +D E S+ VTMD A+ P+ T +E + + G+ R L
Sbjct: 443 IENDTIDVEILNSLTVTMDHLKFAMEVTKPSALRETGIVEVPKVSWDDIGGLGEVKRELQ 502
Query: 516 ERGMLLVEQVKVSK---GSPLVTCLLEGPAGSGKSALAATVGIDSDFAYVKIISAETM-I 571
E VE ++ SP L GP G GK+ +A + + ++ I E + +
Sbjct: 503 ETVQYPVEHPEMFDLFGMSPSRGVLFYGPPGCGKTMMAKAIAKECKANFISIKGPELLTM 562
Query: 572 GFSESSKCAQICKVFEDAYKS 592
F ES + +F+ A +S
Sbjct: 563 WFGESE--GNVRNLFDKARQS 581
>Os04g0617600 Similar to Cdc48 cell division control protein 48, AAA family
Length = 940
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 151/252 (59%), Gaps = 24/252 (9%)
Query: 246 NKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDL 305
+KLG + G+LLYGPPGTGKTL+A+ + + N V GPE+++ +VGE+EKNVRD+
Sbjct: 685 SKLGKR--SGVLLYGPPGTGKTLLAKAVATECSLNFLS-VKGPELINMYVGESEKNVRDI 741
Query: 306 FADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV-EAL 364
F A + + VI FDE+D++ +RGS+ D GV D +V+QLL +IDG+ +
Sbjct: 742 FEKARSARPC--------VIFFDELDSLAPARGSSSDSAGVMDRVVSQLLVEIDGLSDNS 793
Query: 365 NNVLLIGMTNRKDLLDEALLRPGRLE--VHIEINLPDENGRLQILQIHTNKMKESSFLSP 422
++ +IG TNR DLLD ALLRPGR + +++ +N D + R +IL+ T K K L
Sbjct: 794 QDLFIIGATNRPDLLDSALLRPGRFDKLLYVGVN-SDASYRERILKAQTRKYK----LHE 848
Query: 423 NVNLQELAART-KNYSGAELEGVVKSAVSYA---LNRQISMD-DLTKPLDEESIKVTMDD 477
NV+L +A + N++GA++ + A +A L + + D T + + V ++D
Sbjct: 849 NVSLLSIAQQCPPNFTGADIYALCADAWYHAAKNLAKTLEADPSRTSEASADDVIVEIND 908
Query: 478 FVNALHEITPAF 489
F+ L +ITP+
Sbjct: 909 FMTVLGDITPSL 920
>Os02g0205300 Similar to TAT-binding protein homolog (Fragment)
Length = 424
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 166/319 (52%), Gaps = 40/319 (12%)
Query: 171 TPLDRGFLSSDTYIIFEAAPNSGIKVVNQKEAASSKLFKHKEFNLEKLGIGGLSAEFTDI 230
TP R L +D+Y++ P+ +VN + +++ IGGL + +I
Sbjct: 126 TPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEK---VPDSTYDM----IGGLDQQIKEI 178
Query: 231 FRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEV 290
+ + P + LGI KG+LLYGPPGTGKTL+AR + + + V+G E+
Sbjct: 179 -KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSEL 236
Query: 291 LSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSI 350
+ K++GE + VR+LF A + +I DEID+I +R + GTG DS
Sbjct: 237 VQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSARMES--GTGNGDSE 286
Query: 351 VN----QLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQI 406
V +LL ++DG EA N + ++ TNR D+LD+ALLRPGR++ IE P+E+ R I
Sbjct: 287 VQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDI 346
Query: 407 LQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPL 466
L+IH+ KM L ++L+++A + SGAEL+ V A +AL
Sbjct: 347 LKIHSRKMN----LMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR------------ 390
Query: 467 DEESIKVTMDDFVNALHEI 485
E + VT +DF A+ ++
Sbjct: 391 -ERRVHVTQEDFEMAVAKV 408
>Os06g0600100 Similar to TAT-binding protein homolog (Fragment)
Length = 423
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 166/319 (52%), Gaps = 40/319 (12%)
Query: 171 TPLDRGFLSSDTYIIFEAAPNSGIKVVNQKEAASSKLFKHKEFNLEKLGIGGLSAEFTDI 230
+P R L +D+Y++ P+ +VN + +++ IGGL + +I
Sbjct: 125 SPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEK---VPDSTYDM----IGGLDQQIKEI 177
Query: 231 FRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEV 290
+ + P + LGI KG+LLYGPPGTGKTL+AR + + + V+G E+
Sbjct: 178 -KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSEL 235
Query: 291 LSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSI 350
+ K++GE + VR+LF A + +I DEID+I +R + G+G DS
Sbjct: 236 VQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSAR--MQSGSGGGDSE 285
Query: 351 VN----QLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQI 406
V +LL ++DG EA N + ++ TNR D+LD+ALLRPGR++ IE P+E+ R I
Sbjct: 286 VQRTMLELLNQLDGFEASNKIKVLMATNRMDILDQALLRPGRIDRKIEFPNPNEDSRFDI 345
Query: 407 LQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPL 466
L+IH+ KM L ++L+++A + SGAEL+ V A +AL
Sbjct: 346 LKIHSRKMN----LMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR------------ 389
Query: 467 DEESIKVTMDDFVNALHEI 485
E + V +DF+ A+ ++
Sbjct: 390 -ERRVHVNQEDFLMAVAKV 407
>Os09g0515100 Similar to Cdc48 cell division control protein 48, AAA family
Length = 1198
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 144/276 (52%), Gaps = 21/276 (7%)
Query: 220 IGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNG 279
IGGLS + F ++P N I +G+LL GPPGTGKTL+AR + +
Sbjct: 366 IGGLSDYIDALKEMVFFPLLYPDFFAN-YHITPPRGVLLCGPPGTGKTLIARALACAASK 424
Query: 280 NEPKIV----NGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICK 335
K+ G +VLSK+VGE E+ ++ LF +A+ +Q + +I FDEID +
Sbjct: 425 AGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPS--------IIFFDEIDGLAP 476
Query: 336 SRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEI 395
R S ++ +H+SIV+ LL +DG+++ V+LIG TNR D +D AL RPGR +
Sbjct: 477 VRSSKQEQ--IHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFFF 534
Query: 396 NLPDENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNR 455
LP R +IL IHT K K+ P ELAA Y GA+L+ + A A
Sbjct: 535 PLPGYEARAEILDIHTRKWKDP---PPKELKTELAASCVGYCGADLKALCTEAAIRAFRE 591
Query: 456 ---QISMDDLTKPLDEESIKVTMDDFVNALHEITPA 488
Q+ D +D +S++V F+ A+ ITPA
Sbjct: 592 KYPQVYTSDDKFVIDVDSVRVEKYHFLEAMSTITPA 627
>Os02g0803700 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1)
Length = 429
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 150/292 (51%), Gaps = 28/292 (9%)
Query: 168 ENSTPLDRGFLSSDTYIIFEAAP---NSGIKVVNQKEAASSKLFKHKEFNLEKLGIGGLS 224
E P D ++ D+Y+I + P +S +K + E + +++N IGGL
Sbjct: 133 EKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT------EDYN----DIGGLE 182
Query: 225 AEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKI 284
+ ++ A + KLGI+ KG+LLYGPPGTGKTLMAR N K+
Sbjct: 183 KQIQELVE-AIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKL 241
Query: 285 VNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSR-GSTRDG 343
GP+++ F+G+ K VRD F A+ +I DEIDAI R S G
Sbjct: 242 A-GPQLVQMFIGDGAKLVRDAFQLAKEKSPC--------IIFIDEIDAIGTKRFDSEVSG 292
Query: 344 TGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGR 403
+ +LL ++DG + + +I TNR D+LD AL+R GRL+ IE P E R
Sbjct: 293 DREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEAR 352
Query: 404 LQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNR 455
+ILQIH+ KM ++P+VN +ELA T +++GA+L+ V A AL R
Sbjct: 353 ARILQIHSRKMN----VNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 400
>Os06g0173100 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
(LEMA-1)
Length = 429
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 149/288 (51%), Gaps = 28/288 (9%)
Query: 172 PLDRGFLSSDTYIIFEAAP---NSGIKVVNQKEAASSKLFKHKEFNLEKLGIGGLSAEFT 228
P D ++ D+Y+I + P +S +K + E + +++N IGGL +
Sbjct: 137 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT------EDYN----DIGGLEKQIQ 186
Query: 229 DIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGP 288
++ A + KLGI+ KG+LLYGPPGTGKTLMAR N K+ GP
Sbjct: 187 ELVE-AIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA-GP 244
Query: 289 EVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSR-GSTRDGTGVH 347
+++ F+G+ K VRD F A+ +I DEIDAI R S G
Sbjct: 245 QLVQMFIGDGAKLVRDAFQLAKEKAPC--------IIFIDEIDAIGTKRFDSEVSGDREV 296
Query: 348 DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQIL 407
+ +LL ++DG + + +I TNR D+LD AL+R GRL+ IE P E R +IL
Sbjct: 297 QRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARIL 356
Query: 408 QIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNR 455
QIH+ KM ++P+VN +ELA T +++GA+L+ V A AL R
Sbjct: 357 QIHSRKMN----VNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 400
>AK119842
Length = 769
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 167/357 (46%), Gaps = 46/357 (12%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKN 301
P NKLG + KG+LL GPPGTGKTL+AR + G V+G E +VG K
Sbjct: 313 PERYNKLGGRLPKGVLLIGPPGTGKTLLARAVAGEA-GVPFFYVSGSEFDEVYVGVGAKR 371
Query: 302 VRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 361
VR+LF A ++ DE+DA+ R S RD H +NQLL +DG
Sbjct: 372 VRELFTAARAKSPA--------IVFIDELDAVGGKRVS-RDAN-YHRQTLNQLLNDLDGF 421
Query: 362 EALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLS 421
+ V+ I TN +LLD AL RPGR + H+++ LPD +GRL IL+ HT K++ L+
Sbjct: 422 DQSTGVIFIAATNHPELLDSALTRPGRFDRHVQVELPDVSGRLAILKYHTKKIR----LN 477
Query: 422 PNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQ---ISMDDLTKPLD-------EESI 471
P ++L +A T +SGAELE + SA A Q +S+ DL D + S
Sbjct: 478 PEIDLSTIARGTPGFSGAELENLANSAAIRASKLQSKFVSLVDLEWAKDKIMMGAEKRSR 537
Query: 472 KVTMDDFVN-ALHEITPAF-GASTDDLERCRLRGMVDCGKA-----------HRHLYERG 518
V + D ++ A HE A G T ++ G A H H +
Sbjct: 538 PVPLQDKIHTAYHEAGHALVGLYTKGFNELHKATILPRGHAAGITFYLPNEEHHHTRRQ- 596
Query: 519 MLLVEQVKVSKGSPLVTCLLEGPAGSGKSALAATVGIDSDFAYVKIISAETMIGFSE 575
+ Q++V G + L+ GP G A + + + AY + S GFS+
Sbjct: 597 --YIRQIQVCLGGKVAEELVLGPDNVGTGA-SGDIQSATQMAYDMVTSC----GFSD 646
>Os04g0284600 Similar to TAT-binding protein 1 (Fragment)
Length = 357
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 143/272 (52%), Gaps = 29/272 (10%)
Query: 214 NLEKLGIGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQI 273
N GIGGL + ++ A + + +LGI KG+LLYGPPGTGKTL+A
Sbjct: 110 NEHYCGIGGLEKQIEELVE-AVVLPIIHKNCFQRLGIHPPKGVLLYGPPGTGKTLVAHAF 168
Query: 274 GKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAI 333
N K+ GP++ K +GE + VRD F A+ +I DEIDAI
Sbjct: 169 ASQTNATFLKL-TGPQLAVKLIGEGARLVRDAFQLAKEKAPC--------IIFIDEIDAI 219
Query: 334 CKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHI 393
+ D V +IV +LL ++DGV + ++ +I TNR ++LD A LR GRL+ I
Sbjct: 220 GSKHFDSGDRE-VQQTIV-ELLNQLDGVGSYESIKVIAATNRPEVLDPAFLRSGRLDQKI 277
Query: 394 EINLPDENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYAL 453
E P E R++IL+IH+ KM + +P+VN +ELA T +++GA+L+ V A A
Sbjct: 278 EFPHPSEQARVRILEIHSRKMDK----NPDVNFEELACCTDDFNGAQLKAVCFEASMLAF 333
Query: 454 NRQISMDDLTKPLDEESIKVTMDDFVNALHEI 485
+R ++ +V +DFV A+ ++
Sbjct: 334 HR-------------DATEVRHEDFVRAIAQV 352
>Os02g0199900 Similar to 26S proteasome regulatory complex subunit p42D
Length = 400
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 136/238 (57%), Gaps = 19/238 (7%)
Query: 214 NLEKLGIGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQI 273
N+ +GGLS + ++ R + + P + ++GIK KG+LLYGPPGTGKTL+AR I
Sbjct: 136 NVSYSAVGGLSDQIREL-RESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 194
Query: 274 GKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAI 333
++ N KIV+ ++ K++GE+ + +R++F A + Q +I DEIDAI
Sbjct: 195 ASNIDANFLKIVSSA-IIDKYIGESARLIREMFGYARDHQPC--------IIFMDEIDAI 245
Query: 334 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLE 390
R S +GT I + +LL ++DG + L V +I TNR D+LD ALLRPGRL+
Sbjct: 246 GGRRFS--EGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLD 303
Query: 391 VHIEINLPDENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSA 448
IEI LP+E R+++L+IH + + ++ + + + ++GA+L V A
Sbjct: 304 RKIEIPLPNEQARMEVLKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEA 357
>Os06g0607800 Similar to 26S proteasome regulatory complex subunit p42D
Length = 401
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 136/238 (57%), Gaps = 19/238 (7%)
Query: 214 NLEKLGIGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQI 273
N+ +GGLS + ++ R + + P + ++GIK KG+LLYGPPGTGKTL+AR I
Sbjct: 137 NVSYSAVGGLSDQIREL-RESIELPLMNPKLFLRVGIKPPKGVLLYGPPGTGKTLLARAI 195
Query: 274 GKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAI 333
++ N KIV+ ++ K++GE+ + +R++F+ A Q +I DEIDAI
Sbjct: 196 ASNIDANFLKIVSSA-IIDKYIGESARLIREMFSYAREHQPC--------IIFMDEIDAI 246
Query: 334 CKSRGSTRDGTGVHDSI---VNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLE 390
R S +GT I + +LL ++DG + L V +I TNR D+LD ALLRPGRL+
Sbjct: 247 GGRRFS--EGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLD 304
Query: 391 VHIEINLPDENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSA 448
IEI LP+E R+++L+IH + + ++ + + + ++GA+L V A
Sbjct: 305 RKIEIPLPNEQSRMEVLKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEA 358
>Os02g0784700 Similar to 26S protease regulatory subunit 7 (26S proteasome
subunit 7) (26S proteasome AAA-ATPase subunit RPT1)
(Regulatory particle triple-A ATPase subunit 1)
Length = 235
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 130/246 (52%), Gaps = 31/246 (12%)
Query: 247 KLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLF 306
KLGI KG+L YGPPGTGKTL+AR + + +++ G E++ K+VGE + VR+LF
Sbjct: 5 KLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI-GSELVQKYVGEGARMVRELF 63
Query: 307 ADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLL---TKIDGVEA 363
A + + ++ FDE+DAI +R DG G + + +L ++DG +A
Sbjct: 64 QMARSKKAC--------IVFFDEVDAIGGARFD--DGVGGDNEVQRTMLEIVNQLDGFDA 113
Query: 364 LNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPN 423
N+ ++ TNR D LD ALLRPGRL+ +E LPD GR QI +IHT M +
Sbjct: 114 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMN----CERD 169
Query: 424 VNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVTMDDFVNALH 483
+ + LA N +GA++ V A YA+ + VT DF++A++
Sbjct: 170 IRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKT-------------VTEKDFLDAVN 216
Query: 484 EITPAF 489
++ +
Sbjct: 217 KVIKGY 222
>Os06g0669400 Similar to FtsH protease (VAR2) (Zinc dependent protease)
Length = 609
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 120/219 (54%), Gaps = 22/219 (10%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKI----VNGPEVLSKFVGE 297
P +G + KG+LL GPPGTGKTL+A+ I E + ++G E + FVG
Sbjct: 169 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA-----GEAGVPFFSISGSEFVEMFVGV 223
Query: 298 TEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGS-TRDGTGVHDSIVNQLLT 356
VRDLF A+ + ++ DEIDA+ + RG+ G + +NQLLT
Sbjct: 224 GASRVRDLFKKAKENAPC--------IVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLT 275
Query: 357 KIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKE 416
++DG E +++I TNR D+LD ALLRPGR + + +++PD GR +IL++H + K
Sbjct: 276 EMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKK- 334
Query: 417 SSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNR 455
+V+L+ +A RT +SGA+L ++ A A R
Sbjct: 335 ---FDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRR 370
>Os06g0192600 26S proteasome regulatory particle triple-A ATPase subunit1 (26S
protease regulatory subunit 7)
Length = 426
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 138/273 (50%), Gaps = 32/273 (11%)
Query: 220 IGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNG 279
+GG + + R + P KLGI KG+L YGPPGTGKTL+AR + +
Sbjct: 170 VGGCKEQIEKM-REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDA 228
Query: 280 NEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGS 339
+++ G E++ K+VGE + VR+LF A + + ++ FDE+DAI +R
Sbjct: 229 CFIRVI-GSELVQKYVGEGARMVRELFQMARSKKAC--------IVFFDEVDAIGGARFD 279
Query: 340 TRDGTGVHDSIVNQLL---TKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEIN 396
DG G + + +L ++DG +A N+ ++ TNR D LD ALLRPGRL+ +E
Sbjct: 280 --DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
Query: 397 LPDENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQ 456
LPD GR QI +IHT M ++ + LA N +GA++ V A YA+ +
Sbjct: 338 LPDLEGRTQIFKIHTRTMN----CERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRAR 393
Query: 457 ISMDDLTKPLDEESIKVTMDDFVNALHEITPAF 489
VT DF++A++++ +
Sbjct: 394 RKT-------------VTEKDFLDAVNKVIKGY 413
>AK110388
Length = 957
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 139/276 (50%), Gaps = 42/276 (15%)
Query: 249 GIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFAD 308
G K G+L+YGPPG GKTL+A+ I + N V GPE+++ +VGE+EKN+R LF
Sbjct: 686 GAKQRAGVLMYGPPGCGKTLLAKAIATEMGLNFIS-VKGPELINMYVGESEKNIRLLFQR 744
Query: 309 AENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV------- 361
A ++ + FDE+DA+ RG+ D GV D IV QLL ++DGV
Sbjct: 745 ARDNSPC--------ICFFDELDALAPKRGAKGDSGGVMDRIVAQLLAEVDGVGGTKSDG 796
Query: 362 EALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIH--TNKMKESSF 419
A V +IG TNR DLLD +LLRPGR + + P +N + Q+ + T K K
Sbjct: 797 SASAQVFIIGATNRPDLLDPSLLRPGRFDRLCYLG-PPQNKKEQVAAVKALTRKFK---- 851
Query: 420 LSPNVNLQELAARTKN-YSGAELEGVVKSAVSYALNRQI--------SMDDLTK------ 464
L+P+V+L + + YSGA+ + A+ A+N + + D K
Sbjct: 852 LAPDVDLAAVVEPLEPVYSGADYFALCSDAMMLAVNEAVERLKAQAFAKDGTVKEAPAAA 911
Query: 465 --PLDEESIKVTMDDFVNALHEITPAFGASTDDLER 498
P +E + + M F A + P+ S DL+R
Sbjct: 912 TVPAKQEPLLIEMRHFEAARAALKPSV--SPADLKR 945
>Os06g0725900 Similar to Cell division protein ftsH homolog, chloroplast
precursor (EC 3.4.24.-) (DS9)
Length = 686
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 125/231 (54%), Gaps = 19/231 (8%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKI-VNGPEVLSKFVGETEK 300
P LG K KG LL GPPGTGKTL+AR + P E + FVG
Sbjct: 254 PDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG--EAGVPFFSCAASEFVELFVGVGAS 311
Query: 301 NVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGS-TRDGTGVHDSIVNQLLTKID 359
VRDLF A+ ++ DEIDA+ + RG+ G + +NQLLT++D
Sbjct: 312 RVRDLFEKAKAKAPC--------IVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMD 363
Query: 360 GVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSF 419
G + V+++ TNR D+LD ALLRPGR + + ++ PD GR++IL++H+
Sbjct: 364 GFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSR----GKA 419
Query: 420 LSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNR---QISMDDLTKPLD 467
L+ +V+ +++A RT ++GA+L+ ++ A A R +IS D+++ L+
Sbjct: 420 LAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 470
>Os07g0691800 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 448
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 220 IGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNG 279
IGGL A+ +I + A + P + +GI+ KG++LYG PGTGKTL+A+ + +
Sbjct: 195 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSA 253
Query: 280 NEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGS 339
++V G E++ K++G+ K VR+LF A D+ ++ DEIDA+ R
Sbjct: 254 TFLRVV-GSELIQKYLGDGPKLVRELFRVA--------DELSPSIVFIDEIDAVGTKRYD 304
Query: 340 TRDGTGVH-DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLP 398
G + +LL ++DG ++ +V +I TNR + LD ALLRPGR++ IE LP
Sbjct: 305 AHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 364
Query: 399 DENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQIS 458
D R +I QIHT+KM L+ +VNL+E +SGA+++ + A AL
Sbjct: 365 DIKTRRRIFQIHTSKMT----LADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR---- 416
Query: 459 MDDLTKPLDEESIKVTMDDFVNALHEI 485
E +KVT DF A ++
Sbjct: 417 ---------ERRMKVTHADFKKAKEKV 434
>Os06g0109400 AAA ATPase domain containing protein
Length = 770
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 180/391 (46%), Gaps = 69/391 (17%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKI----VNGPEVLSKFVGE 297
P V LG+K V G+LL+GPPG GKT +A I NE + ++ PEV+S G
Sbjct: 214 PEVPRWLGVKPVAGLLLHGPPGCGKTTLAHAIA-----NETGVPFYKISAPEVVSGVSGA 268
Query: 298 TEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTK 357
+E+N+R LF A + ++ DEIDAI R + + + IV QL+T
Sbjct: 269 SEENIRSLFKKAYRTAPS--------IVFIDEIDAIASKRENLQ--REMERRIVTQLMTC 318
Query: 358 ID-------------GVEALNN----VLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDE 400
+D G E+ V++IG TNR D +D+AL RPGR + I + +PDE
Sbjct: 319 MDEYHQQIGSGSGDVGSESAEKKPGYVIVIGATNRPDAVDQALRRPGRFDREISLGVPDE 378
Query: 401 NGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISM- 459
R +IL + T ++ L ++L ++A T ++ GA+L+ +V A + A+ R I
Sbjct: 379 YARKKILMMLTRNLR----LEGQLDLLKIARATSSFVGADLKALVDKAGNLAMKRIIDRR 434
Query: 460 --------------DDLTKPLDE---ESIKVTMDDFVNALHEITPAFG----ASTDDLER 498
D +P D E + +TMDDF A + P+ +S D+
Sbjct: 435 RAQFCQEHDENSKHDWWRQPWDANEIEGLSITMDDFEEATKMVQPSLRREGFSSIPDVTW 494
Query: 499 CRLRGMVDCGKAHRHLYERGMLLVEQVKVSKGSPLVTCLLEGPAGSGKSALAATVGIDSD 558
+ G+ K R + E+ K + LL GP G GK+ +A V ++
Sbjct: 495 DDVGGLDSLRKEFDRYIIRCIKQPEEYKTFGLNMQAGFLLFGPPGCGKTLIAKAVAHEAG 554
Query: 559 FAYVKIISAETM---IGFSESSKCAQICKVF 586
++ I E + +G SES ++ K+F
Sbjct: 555 ANFIHIKGPELLNKYVGESES----EVRKIF 581
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 139/271 (51%), Gaps = 18/271 (6%)
Query: 220 IGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNG 279
+GGL + F R + P G+ G LL+GPPG GKTL+A+ +
Sbjct: 497 VGGLDS-LRKEFDRYIIRCIKQPEEYKTFGLNMQAGFLLFGPPGCGKTLIAKAVAHEAGA 555
Query: 280 NEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGS 339
N I GPE+L+K+VGE+E VR +F A+ + ++ FDE+DA+ RG
Sbjct: 556 NFIHI-KGPELLNKYVGESESEVRKIFIRAQTNTPC--------ILFFDEVDALTTKRG- 605
Query: 340 TRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPD 399
++G V + ++NQLL ++DG V +IG TNR D++D+A LRPGR + LP
Sbjct: 606 -KEGGWVVERLLNQLLIELDGAGERKGVFVIGATNRIDVIDDAALRPGRFGKKHYVPLPG 664
Query: 400 ENGRLQILQIHTNKMKESSFLSPNVNLQELAAR--TKNYSGAELEGVVKSAVSYALNRQI 457
+ R+ IL+ + + +S +V+L LA R KN +GA+L +V A AL ++
Sbjct: 665 ADERVSILRA----LARNKPISSSVDLGALARREECKNLTGADLASMVNEAAMAALEERL 720
Query: 458 SMDDLTKPLDEESIKVTMDDFVNALHEITPA 488
+ + S + + F AL ++ P+
Sbjct: 721 EFLENGESSMSSSSAIELPHFERALAKMQPS 751
>Os03g0298400 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 450
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 139/267 (52%), Gaps = 28/267 (10%)
Query: 220 IGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNG 279
IGGL A+ +I + A + P + +GI+ KG++LYG PGTGKTL+A+ + +
Sbjct: 197 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSA 255
Query: 280 NEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGS 339
++V G E++ K++G+ K VR+LF A D ++ DEIDA+ R
Sbjct: 256 TFLRVV-GSELIQKYLGDGPKLVRELFRVA--------DDLSPSIVFIDEIDAVGTKRYD 306
Query: 340 TRDGTGVH-DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLP 398
G + +LL ++DG ++ +V +I TNR + LD ALLRPGR++ IE LP
Sbjct: 307 AHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 366
Query: 399 DENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQIS 458
D R +I QIHT+KM L+ +VNL+E +SGA+++ + A AL
Sbjct: 367 DIKTRRRIFQIHTSKMT----LADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR---- 418
Query: 459 MDDLTKPLDEESIKVTMDDFVNALHEI 485
E +KVT DF A ++
Sbjct: 419 ---------ERRMKVTHADFKKAKEKV 436
>Os01g0842600 Similar to AAA-metalloprotease FtsH
Length = 802
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 127/236 (53%), Gaps = 26/236 (11%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKN 301
P +LG K KG LL GPPGTGKTL+A+ +G ++G + + FVG
Sbjct: 342 PKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE-SGVPFLSISGSDFMEMFVGVGPSR 400
Query: 302 VRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDG-TGVHD---SIVNQLLTK 357
VR+LF +A Q ++ DEIDAI ++RG R G +G HD S +NQLL +
Sbjct: 401 VRNLFQEAR--------QCSPSIVFIDEIDAIGRARG--RGGFSGGHDERESTLNQLLVE 450
Query: 358 IDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKM--- 414
+DG + V+++ TNR D+LD+ALLRPGR + I I+ PD GR QI +I+ K+
Sbjct: 451 MDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLKLD 510
Query: 415 KESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQ---ISMDDLTKPLD 467
KE SF S Q LAA T ++GA++ V A A + I+M +D
Sbjct: 511 KEPSFYS-----QRLAALTPGFAGADIANVCNEAALIAARSEGTLITMQHFESAID 561
>Os05g0458400 Similar to AAA-metalloprotease FtsH
Length = 822
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 131/251 (52%), Gaps = 36/251 (14%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKN 301
P +LG K KG LL GPPGTGKTL+A+ +G ++G + + FVG
Sbjct: 357 PKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE-SGVPFLSISGSDFMEMFVGVGPSR 415
Query: 302 VRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDG-TGVHD---SIVNQLLTK 357
VR+LF +A Q +I DEIDAI ++RG R G +G +D S +NQLL +
Sbjct: 416 VRNLFQEAR--------QCAPSIIFIDEIDAIGRARG--RGGFSGSNDERESTLNQLLVE 465
Query: 358 IDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMK-- 415
+DG + V+++ TNR D+LD+ALLRPGR + I I+ PD GR QI +I+ K+K
Sbjct: 466 MDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLD 525
Query: 416 -ESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVT 474
E SF S Q LAA T ++GA++ V A A E ++T
Sbjct: 526 NEPSFYS-----QRLAALTPGFAGADIANVCNEAALIAAR-------------SEETQIT 567
Query: 475 MDDFVNALHEI 485
M F +A+ I
Sbjct: 568 MQHFESAIDRI 578
>Os04g0498800 Similar to Cell division control protein 48 homolog B (AtCDC48b)
Length = 578
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 136/256 (53%), Gaps = 30/256 (11%)
Query: 246 NKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDL 305
++LGI ++G+LL+GPPG KT +A+ + + +G E+ SK+VGE E +R
Sbjct: 331 DRLGISPIRGVLLHGPPGCSKTTLAKAAAHAAQASFFSL-SGAELYSKYVGEGEALLRRT 389
Query: 306 FADAENDQKTRGDQSDLHVIIFDEIDAICKSR----GSTRDGTGVHDSIVNQLLTKIDGV 361
F A + +I FDE DAI R G++ V + +++ LLT++DG+
Sbjct: 390 FQMARLASPS--------IIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGL 441
Query: 362 EALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLS 421
E ++++ TNR + +D ALLRPGR ++ + + PD GR +IL+IHT KM L
Sbjct: 442 ELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMP----LG 497
Query: 422 PNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVTMDD--FV 479
+V+L ++A RT+ ++GA+LEG+ + A AL + S + DD F
Sbjct: 498 DDVDLWKVAERTELFTGADLEGLCREAGMAALRESL-----------RSERFVCDDIHFQ 546
Query: 480 NALHEITPAFGASTDD 495
AL + P+ S D
Sbjct: 547 AALRSLRPSLTQSVVD 562
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 157/334 (47%), Gaps = 37/334 (11%)
Query: 248 LGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFA 307
LG+ +G+LL+GP GTGK M R + + N + +++ V GE EK +R+ F
Sbjct: 64 LGLNFPRGLLLHGPSGTGKKSMVRAVVRECNAHL-TVIDSISVHKPHAGEGEKFMREAFT 122
Query: 308 DAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEA--LN 365
+A ++ Q VI DE+D IC RGS R+ IV QLLT +DG + L
Sbjct: 123 EA----YSQASQGRPAVIFIDELDDICPPRGSRREQG---SRIVGQLLTLMDGKSSKLLP 175
Query: 366 NVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPNVN 425
+++++ R D ++ AL RPGR + IE+ +P R +IL+++T + L V+
Sbjct: 176 HLVVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNL----HLGECVD 231
Query: 426 LQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPL-----DEESIK-VTMDDFV 479
LQ +AA Y GA+L+ + + A A R S + L D ES K V +
Sbjct: 232 LQSVAASCNGYVGADLQALCREAARRAYGRLSSSSESENVLTLIMEDWESAKSVAKNSVT 291
Query: 480 NALHEITPAFGASTDDLE-----RCRLRGMVDCGKAHRHLYERGMLLVEQVKVSKGSPLV 534
+ + PA S DD+ + +L+ V+ H ++R + SP+
Sbjct: 292 RGVTKEIPAV--SWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGI----------SPIR 339
Query: 535 TCLLEGPAGSGKSALAATVGIDSDFAYVKIISAE 568
LL GP G K+ LA + ++ + AE
Sbjct: 340 GVLLHGPPGCSKTTLAKAAAHAAQASFFSLSGAE 373
>AK110158
Length = 856
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 114/211 (54%), Gaps = 13/211 (6%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKI-VNGPEVLSKFVGETEK 300
P KLG K +G +L GPPGTGKTL+A+ P + V+G E + FVG
Sbjct: 390 PEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAG--EAKAPFLSVSGSEFVEMFVGVGPS 447
Query: 301 NVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRD--GTGVHDSIVNQLLTKI 358
VRD+FA+A+ +I DEIDAI KSRG + G +S +N+LL ++
Sbjct: 448 RVRDMFANAKKHAPC--------IIFIDEIDAIGKSRGKGGNFGGNDERESTLNELLVQM 499
Query: 359 DGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESS 418
DG +V+++ TNR D+LD AL+RPGR + HI I+ PD +GR I +H + S
Sbjct: 500 DGFGTEEHVVVLAGTNRPDVLDAALMRPGRFDRHIAIDRPDISGRKDIFLVHLKPLTLHS 559
Query: 419 FLSPNVNLQELAARTKNYSGAELEGVVKSAV 449
++ ++L+ T +SGA++ V A
Sbjct: 560 STDRDLLAEKLSTLTPGFSGADVANVCNEAA 590
>AK110513
Length = 885
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 119/226 (52%), Gaps = 23/226 (10%)
Query: 226 EFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKI- 284
EF D ++ P +LG K KG LL GPPGTGKTL+A+ P +
Sbjct: 386 EFVDFLKK--------PEKYKELGAKIPKGALLVGPPGTGKTLLAKATAG--EAGVPFLS 435
Query: 285 VNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAI--CKSRGSTRD 342
++G + + FVG VRDLF+ A + + +I DEIDAI + RG+
Sbjct: 436 ISGSDFMEMFVGVGPARVRDLFSQARSQAPS--------IIFIDEIDAIGRARGRGAMAG 487
Query: 343 GTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENG 402
G ++ +NQLL ++DG + V+++ TNR D+LD+AL+RPGR + I ++ PD G
Sbjct: 488 GHDERENTLNQLLVEMDGFNTTSGVVVLAGTNRPDILDKALMRPGRFDRTISVDTPDIKG 547
Query: 403 RLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSA 448
R QI ++H K++ L + LAA T +SGA++ V A
Sbjct: 548 REQIFRVHLAKLRLEKALEHYS--ERLAALTPGFSGADIANVCNEA 591
>Os02g0325100 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7)
Length = 419
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 16/285 (5%)
Query: 173 LDRGFLSSDTYIIFEAAPNSGIKVVNQKEAASSKLFKHKEF-NLEKLGIGGLSAEFTDIF 231
++R L + N+ + V+ + +S L E N+ IGG + +I
Sbjct: 120 INRELLKPSASVALHRHSNALVDVLPPEADSSISLLGSSEKPNVTYTDIGGCDIQKQEI- 178
Query: 232 RRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVL 291
R A + + ++GI +G+LLYGPPGTGKT++A+ + ++V G E +
Sbjct: 179 REAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVV-GSEFV 237
Query: 292 SKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVH-DSI 350
K++GE + VRD+F A+ + +I DE+DAI +R + G I
Sbjct: 238 QKYLGEGPRMVRDVFRLAKENAPA--------IIFIDEVDAIATARFDAQTGADREVQRI 289
Query: 351 VNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIH 410
+ +LL ++DG + NV +I TNR D LD ALLRPGRL+ IE LPD + + Q+
Sbjct: 290 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC 349
Query: 411 TNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNR 455
T KM LS V+L++ +R S A++ + + A +A+ +
Sbjct: 350 TAKMN----LSDEVDLEDYVSRPDKISAADIAAICQEAGMHAVRK 390
>Os05g0376200 Similar to Cell division control protein 48 homolog B (AtCDC48b)
Length = 391
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 119/203 (58%), Gaps = 17/203 (8%)
Query: 246 NKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDL 305
++LGI ++G+LL+GPPG KT +A+ + + +G E+ SK+VGE E +R
Sbjct: 165 DRLGISPIRGVLLHGPPGCSKTTLAKAAAHAAQASFFSL-SGAELYSKYVGEGEALLRRT 223
Query: 306 FADAENDQKTRGDQSDLHVIIFDEIDAICKSR----GSTRDGTGVHDSIVNQLLTKIDGV 361
F A + +I FDE DAI R G++ V + +++ LLT++DG+
Sbjct: 224 FQMARLASPS--------IIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGL 275
Query: 362 EALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLS 421
E ++++ TNR + +D ALLRPGR ++ + + PD GR +IL+IHT KM L
Sbjct: 276 ELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMP----LG 331
Query: 422 PNVNLQELAARTKNYSGAELEGV 444
+V+L ++A RT+ ++GA+LEG+
Sbjct: 332 DDVDLWKVAERTELFTGADLEGL 354
>Os02g0649700 Peptidase M41, FtsH extracellular domain containing protein
Length = 822
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 120/214 (56%), Gaps = 15/214 (7%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKI-VNGPEVLSKFVGETEK 300
P +LG + +G+LL G PGTGKTL+A+ + P I + E + +VG
Sbjct: 368 PERYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG--EAEVPFISCSASEFVELYVGMGAA 425
Query: 301 NVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSR-GSTRD-GTGVHDSIVNQLLTKI 358
VRDLFA A+ + + +I DEIDA+ KSR G R + +NQLLT++
Sbjct: 426 RVRDLFARAKKESPS--------IIFIDEIDAVAKSRDGRYRIVSNDEREQTLNQLLTEM 477
Query: 359 DGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESS 418
DG + + V+++G TNR D+LD AL RPGR + + + PD GR IL++H ++ KE
Sbjct: 478 DGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVSR-KELP 536
Query: 419 FLSPNVNLQELAARTKNYSGAELEGVVKSAVSYA 452
L +V+L ++AA T ++GA+L +V A A
Sbjct: 537 -LGKDVDLSDIAAMTTGFTGADLANLVNEAALLA 569
>Os01g0574500 Peptidase M41, FtsH domain containing protein
Length = 715
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 128/228 (56%), Gaps = 26/228 (11%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKI----VNGPEVLSKFVGE 297
P +LG K KG+LL GPPGTGKT++AR I E + +G E FVG
Sbjct: 252 PKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIA-----GEAGVPFFSCSGSEFEEMFVGV 306
Query: 298 TEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTK 357
+ VRDLFA A+ +I DEIDAI SR + +D + ++ NQLL +
Sbjct: 307 GARRVRDLFAAAKKRSPC--------IIFMDEIDAIGGSR-NPKDQQYMKMTL-NQLLVE 356
Query: 358 IDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKES 417
+DG + +++I TN + LD+AL+RPGR + HI + PD GR QIL+ H +K+ +S
Sbjct: 357 LDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKS 416
Query: 418 SFLSPNVNLQELAARTKNYSGAELEGVVK-SAVSYALN--RQISMDDL 462
+V+L +A T +SGA+L +V +A+ A++ + ++M+DL
Sbjct: 417 D----DVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDL 460
>Os06g0229066 Twin-arginine translocation pathway signal domain containing
protein
Length = 486
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 127/257 (49%), Gaps = 27/257 (10%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKI-VNGPEVLSKFVGETEK 300
P +G + KG+LL GPPGTGKTL+A+ I P ++G E + FVG
Sbjct: 238 PEKFTAVGARTPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSLSGSEFIEMFVGVGAS 295
Query: 301 NVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGS-TRDGTGVHDSIVNQLLTKID 359
VRDLF R S ++ DEIDA+ + RG+ G + +NQLLT++D
Sbjct: 296 RVRDLF--------DRAKASAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMD 347
Query: 360 GVEALNNVLL-IGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESS 418
G + ++ I TNR ++LD ALLRPGR + + + LPD GR +IL +H +
Sbjct: 348 GFGGGDGGVVVIAATNRPEILDAALLRPGRFDRRVSVGLPDVRGREEILLVHGANKR--- 404
Query: 419 FLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNR----------QISMDDLTKPLDE 468
L P V+L +A RT +SGA+L ++ A A R S+D + L+
Sbjct: 405 -LDPGVSLAVVAMRTPGFSGADLANLMNEAAILAGRRGKDRITVSEIDDSIDRIVAGLEG 463
Query: 469 ESIKVTMDDFVNALHEI 485
S+ + A HEI
Sbjct: 464 TSMTDGKSKMLVAYHEI 480
>Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.24.-)
Length = 709
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 125/228 (54%), Gaps = 26/228 (11%)
Query: 242 PHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKI----VNGPEVLSKFVGE 297
P LG K KG+LL GPPGTGKT++AR + E + +G E FVG
Sbjct: 245 PKRFTHLGGKLPKGVLLVGPPGTGKTMLARAVA-----GEAGVPFFSCSGSEFEEMFVGV 299
Query: 298 TEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTK 357
+ VRDLFA A+ +I DEIDAI SR + +D + ++ NQLL +
Sbjct: 300 GARRVRDLFAAAKKRSPC--------IIFMDEIDAIGGSR-NPKDQQYMRMTL-NQLLVE 349
Query: 358 IDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKES 417
+DG + +++I TN LD+AL+RPGR + HI + PD GR QIL+ H K+ +S
Sbjct: 350 LDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMLKVLKS 409
Query: 418 SFLSPNVNLQELAARTKNYSGAELEGVVK-SAVSYALN--RQISMDDL 462
+V+L +A T +SGA+L +V +A+ A++ + ++M+DL
Sbjct: 410 D----DVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDL 453
>Os01g0683100 Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3)
(Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
(Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
(AtAAA1)
Length = 519
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 134/254 (52%), Gaps = 36/254 (14%)
Query: 249 GIKH-VKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFA 307
GI+ KG+L++GPPGTGKTL+A+ + G V+ + SK+ GE+E+ VR LF
Sbjct: 263 GIRRPWKGVLMFGPPGTGKTLLAKAVATEC-GTTFFNVSSATLASKWRGESERMVRCLFD 321
Query: 308 DAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS---IVNQLLTKIDGVEAL 364
A + I DEID++C SRG+ +G H+S + ++LL +IDGV
Sbjct: 322 LARFYAPS--------TIFIDEIDSLCTSRGA----SGEHESSRRVKSELLVQIDGVNNS 369
Query: 365 NN--------VLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKE 416
+ V+++ TN +DEAL R RLE I I LP+ R ++ I+ ++
Sbjct: 370 STTEDGQPKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPNFESRKALININLKTVE- 426
Query: 417 SSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQIS--MDDLTKPLDEESIK-- 472
++ +V++ E+A RT+ YSG +L V + A + R+I+ D K + ++ I
Sbjct: 427 ---VATDVDIDEVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDEISKD 483
Query: 473 -VTMDDFVNALHEI 485
V M DF AL ++
Sbjct: 484 PVAMCDFEEALAKV 497
>Os06g0225900 AAA ATPase domain containing protein
Length = 271
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 135/253 (53%), Gaps = 29/253 (11%)
Query: 250 IKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFADA 309
++ KGILL+GPPGTGKTL+A+ + N I G + SK+ G+ EK + LF+ A
Sbjct: 13 LRPCKGILLFGPPGTGKTLLAKALATEAGANFISIT-GSNLTSKWFGDAEKLTKALFSFA 71
Query: 310 ENDQKTRGDQSDLHVIIF-DEIDAICKSRGSTRDGTGVHDS---IVNQLLTKIDGVEALN 365
VIIF DE+D++ +RG G H++ + N+ + DG+ +
Sbjct: 72 SRLAP---------VIIFVDEVDSLLGARG----GAFEHEATRRMRNEFMAAWDGLRSKE 118
Query: 366 N--VLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPN 423
N +L++G TNR LD+A++R RL I ++LPD R++IL+I K L +
Sbjct: 119 NQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDSQNRMKILKILLAKEN----LESD 172
Query: 424 VNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIK-VTMDDFVNAL 482
ELA T+ YSG++L+ + +A ++ + + + S++ + ++DFV A
Sbjct: 173 FRFDELANATEGYSGSDLKNLCIAAAYRPVHELLEEEKGGVSGTKISLRPLKLEDFVQAK 232
Query: 483 HEITP--AFGAST 493
+++P AF A++
Sbjct: 233 AKVSPSVAFDATS 245
>Os06g0130000 Similar to Tobacco mosaic virus helicase domain-binding protein
(Fragment)
Length = 487
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 134/254 (52%), Gaps = 24/254 (9%)
Query: 251 KHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVN--GPEVLSKFVGETEKNVRDLFAD 308
+ +G+LL+GPPG GKT++A+ + + +E N + SK+VGE EK VR LF
Sbjct: 246 RPARGLLLFGPPGNGKTMLAKAVA---SESEATFFNVSASSLTSKWVGEAEKLVRTLFMV 302
Query: 309 AENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNN-- 366
A + Q + VI DEID++ +R + + + ++ L + DGV + +
Sbjct: 303 AVDRQPS--------VIFMDEIDSVMSARLANENDASRR--LKSEFLIQFDGVTSNPDDL 352
Query: 367 VLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPNVNL 426
V++IG TN+ LD+A+LR RL I + LPD N R +L+ ++K SF + +L
Sbjct: 353 VIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRLLLK---TQLKGQSFKLSSHDL 407
Query: 427 QELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVTMDDFVNALHEIT 486
+ LAA T+ YSG++L + + A + R++ ++ + + +DF A+ I
Sbjct: 408 ERLAADTEGYSGSDLRALCEEAAMMPI-RELGPQNILTIKANQLRPLKYEDFKKAMTVIR 466
Query: 487 PAFGAS-TDDLERC 499
P+ S D+LE+
Sbjct: 467 PSLQKSKWDELEKW 480
>Os09g0560200 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7).
Splice isoform 2
Length = 448
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 41/261 (15%)
Query: 220 IGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGK---- 275
IGG A+ ++ R A + P + G+ +G+LL+GP GTGKT++A+ + +
Sbjct: 192 IGGCEAQKREV-REAVELPLTHPELFAAAGVDPPRGVLLHGPLGTGKTMLAKAVARETSA 250
Query: 276 ---LLNGNEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDA 332
+N E +GP V VRDLF A + ++ DE+DA
Sbjct: 251 AFFRVNAAELARHDGPRV-----------VRDLFRLARDMAPA--------IVFIDEVDA 291
Query: 333 ICKSRGSTRDGTGVH----DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGR 388
I +R D G ++ +LLT++DG + NV +I TNR D LD ALLRPGR
Sbjct: 292 IAAARQGGDDDDGGARRHVQRVLIELLTQMDGFDESTNVRVIMATNRADDLDPALLRPGR 351
Query: 389 LEVHIEINLPD--ENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVK 446
L+ +E P+ E RL +LQ T M L +V+L LAAR S AE+ V +
Sbjct: 352 LDRKVEFTAPESPEEKRL-VLQTCTAGMS----LDGDVDLDALAARRDKLSAAEIAAVCR 406
Query: 447 SAVSYALNRQ---ISMDDLTK 464
A A+ + ++ DD K
Sbjct: 407 KAGMQAVRDRRGAVTADDFDK 427
>Os10g0442600 Similar to Cell division control protein 48 homolog A (AtCDC48a)
Length = 203
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 4/139 (2%)
Query: 350 IVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQI 409
++NQLLT++DG+ A V +IG TNR D++D ALLRPGRL+ I I LPDE RLQI +
Sbjct: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
Query: 410 HTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEE 469
K S ++ +V+L LA T+ +SGA++ + + A YA+ I D + +E
Sbjct: 61 CLRK----SPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKE 116
Query: 470 SIKVTMDDFVNALHEITPA 488
+ + +D V+ + EI A
Sbjct: 117 NPEAMEEDEVDDIAEIKAA 135
>Os01g0673500 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 370
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 38/269 (14%)
Query: 254 KGILLYGPPGTGKTLMARQIGKLLNGNEPKI----VNGPEVLSKFVGETEKNVRDLFADA 309
KGILL+GPPGTGKT++A+ + E K ++ ++SK+ G++EK V+ LF A
Sbjct: 124 KGILLFGPPGTGKTMLAKAV-----ATECKTTFFNISASSIVSKWRGDSEKLVKVLFELA 178
Query: 310 ENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNN-VL 368
+ + I DEIDAI RG R + +LL ++DG+ ++ V
Sbjct: 179 RHHAPS--------TIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTDDLVF 230
Query: 369 LIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPNVNLQE 428
++ TN LD A+LR RLE I + LP++ R + + ++ S + N+
Sbjct: 231 VLAATNLPWELDAAMLR--RLEKRILVPLPEQEARHAMFE----ELLPSVPGTMNIPYDV 284
Query: 429 LAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVTMDDFVNALHEITPA 488
L +T+ YSG+++ V K A L R +S+ L+ +V D+ L E+ P
Sbjct: 285 LVEKTEGYSGSDIRLVCKEAAMQPLRRLMSV------LEGRQEEVPEDE----LPEVGP- 333
Query: 489 FGASTDDLERCRLRGMVDCGKAHRHLYER 517
+T+D+E LR H H YE+
Sbjct: 334 --VTTEDIELA-LRNTRPSAHLHVHRYEK 359
>Os05g0584600 AAA ATPase domain containing protein
Length = 855
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 28/207 (13%)
Query: 250 IKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVN--GPEVLSKFVGETEKNVRDLFA 307
+K +GILL+GPPGTGKT++A+ I N +N + SK+ GE EKNVR LF+
Sbjct: 532 LKPCRGILLFGPPGTGKTMLAKAIA---NDAGASFINVSMSTITSKWFGEDEKNVRALFS 588
Query: 308 DAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS---IVNQLLTKIDGV--E 362
A T +I DE+D++ R G H++ I N+ ++ DG+ +
Sbjct: 589 LAAKVAPT--------IIFVDEVDSMLGQRAR----CGEHEAMRKIKNEFMSHWDGLLSK 636
Query: 363 ALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSP 422
+ +L++ TNR LDEA++R R E I + LP + R IL+ +K K ++
Sbjct: 637 SGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTLDSRELILRTLLSKEK----VAE 690
Query: 423 NVNLQELAARTKNYSGAELEGVVKSAV 449
+++ +ELA T+ YSG++L+ + +A
Sbjct: 691 DIDYKELATMTEGYSGSDLKNLCVTAA 717
>Os01g0226400 AAA ATPase domain containing protein
Length = 840
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 28/207 (13%)
Query: 250 IKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVN--GPEVLSKFVGETEKNVRDLFA 307
+K +GILL+GPPGTGKT++A+ I N + +N + SK+ GE EKNVR LF
Sbjct: 563 LKPCRGILLFGPPGTGKTMLAKAIA---NEAQASFINVSMSTITSKWFGEDEKNVRALFT 619
Query: 308 DAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS---IVNQLLTKIDGVEAL 364
A T +I DE+D++ R+ G H++ I N+ +T DG+ +
Sbjct: 620 LAAKVSPT--------IIFVDEVDSML----GQRNRAGEHEAMRKIKNEFMTHWDGLLSR 667
Query: 365 --NNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSP 422
+L++ TNR LDEA++R R E I + LP R IL+ +K K +
Sbjct: 668 PDQKILVLAATNRPFDLDEAIIR--RFERRIMVGLPSLESRELILRSLLSKEK----VDG 721
Query: 423 NVNLQELAARTKNYSGAELEGVVKSAV 449
++ +ELA T+ YSG++L+ + +A
Sbjct: 722 GLDYKELATMTEGYSGSDLKNLCTTAA 748
>Os01g0141300
Length = 448
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 120/242 (49%), Gaps = 34/242 (14%)
Query: 254 KGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQ 313
K LLYGPPGTGK+ +A + ++ I + +++SK++GE+EK V +LF A +
Sbjct: 143 KAFLLYGPPGTGKSYLAEAVATEVDSTFFSISSS-DLVSKWMGESEKLVANLFQMARENA 201
Query: 314 KTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNN-VLLIGM 372
+ +I DEID++C RG + I +LL ++ G + N+ VL++
Sbjct: 202 PS--------IIFIDEIDSLCGQRGECNENEASR-RIKTELLVQMQGFDNSNDKVLVLAA 252
Query: 373 TNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIH----TNKMKESSFLSPNVNLQE 428
TN +LD+A+ R R + I I LPD R +IH + + E F+S
Sbjct: 253 TNMPHVLDQAMRR--RFDKCIYIPLPDLKARKDTFKIHIGDTPHSLTEGDFVS------- 303
Query: 429 LAARTKNYSGAELEGVVKSAVSYALNRQ------ISMDDLTKPLDEE----SIKVTMDDF 478
LA +T+ +SG+++ VK A+ + + I DD T E+ SI+ TM +
Sbjct: 304 LAYQTEGFSGSDIAVCVKDALFQPVRKTQDAKFFIKADDDTWTPSEQSQPGSIQTTMQEL 363
Query: 479 VN 480
+
Sbjct: 364 AS 365
>Os01g0757400 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 386
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 24/211 (11%)
Query: 254 KGILLYGPPGTGKTLMARQIGKLLNGNEPKI----VNGPEVLSKFVGETEKNVRDLFADA 309
KGILL+GPPGTGKT++A+ + E K ++ ++SK+ G++EK V+ LF A
Sbjct: 136 KGILLFGPPGTGKTMLAKAV-----ATECKTTFFNISASSIVSKWRGDSEKLVKVLFELA 190
Query: 310 ENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNN-VL 368
+ + I DEIDAI RG R + +LL ++DG+ N+ V
Sbjct: 191 RHHAPS--------TIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTNDLVF 242
Query: 369 LIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPNVNLQE 428
++ TN LD A+LR RLE I + LP+ R + + ++ S+ V
Sbjct: 243 VLAATNLPWELDAAMLR--RLEKRILVPLPEAEARHAMFE----ELLPSTTSKLEVPYDT 296
Query: 429 LAARTKNYSGAELEGVVKSAVSYALNRQISM 459
L +T+ YSG+++ V K A L R +S+
Sbjct: 297 LVEKTEGYSGSDIRLVCKEAAMQPLRRLMSV 327
>Os07g0672500 SMAD/FHA domain containing protein
Length = 1081
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 24/204 (11%)
Query: 250 IKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFADA 309
+K KGILL+GPPGTGKT++A+ + N I + + SK+ GE EK V+ +F+ A
Sbjct: 811 MKPCKGILLFGPPGTGKTMLAKAVATEAGANFINI-SMSSIASKWFGEGEKYVKAVFSLA 869
Query: 310 ENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS---IVNQLLTKIDGVEALNN 366
+ VI DE+D + R+ G H++ + N+ + DG+ +
Sbjct: 870 SKIAPS--------VIFVDEVDGML----GRRENPGEHEAMRKMKNEFMVNWDGLRTKDK 917
Query: 367 --VLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPNV 424
VL++ TNR LDEA++R RL + +NLPD + R +IL + K L+ +V
Sbjct: 918 ERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDASNRKKILSVILAKED----LADDV 971
Query: 425 NLQELAARTKNYSGAELEGVVKSA 448
+L+ LA T YSG++++ + +A
Sbjct: 972 DLEALANLTDGYSGSDMKNLCVTA 995
>Os03g0344700 AAA ATPase domain containing protein
Length = 666
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 117/224 (52%), Gaps = 24/224 (10%)
Query: 250 IKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFADA 309
+K KGILL+GPPGTGKT++A+ + N ++ + SK+ GE EK V+ +F+ A
Sbjct: 396 MKPCKGILLFGPPGTGKTMLAKAVATEAGANF-INISMSSISSKWFGEGEKFVKAVFSLA 454
Query: 310 ENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS---IVNQLLTKIDGVEALNN 366
+ VI DE+D + R+ G H++ + N+ + DG+ +
Sbjct: 455 SKIAPS--------VIFVDEVDGML----GRRENPGEHEAMRKMKNEFMVNWDGLRTKDK 502
Query: 367 --VLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPNV 424
VL++ TNR LDEA++R RL + +NLPD + R +IL + K L+ +V
Sbjct: 503 ERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDASNRRKILSVILAKED----LADDV 556
Query: 425 NLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDE 468
+L+ +A+ T+ YSG++L+ + +A + + + K L E
Sbjct: 557 DLEAVASLTEGYSGSDLKNLCITAAHLPIKDILEKEKKEKALAE 600
>Os06g0714500 AAA ATPase domain containing protein
Length = 393
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 60/299 (20%)
Query: 192 SGIKVVNQKEAASSKLFKHKEFNLEKLGIGGLSAEFTDIFRRAFASRVF-PPHVVNKL-- 248
+G++ ++ AAS K +HK+ ++LG +S T + A V P H+ +
Sbjct: 29 AGLRQLDPNRAASQKALQHKKEIAKRLGRPLVS---TTPYEDVIACDVINPDHIDVEFDS 85
Query: 249 --GIKHVK---------------------------GILLYGPPGTGKTLMARQIGKLLNG 279
G+ HVK G+LLYGPPGTGKT++A+ I K +G
Sbjct: 86 IGGLDHVKQALYELVILPLRRPELFTFGKLLSPQKGVLLYGPPGTGKTMLAKAIAK-ESG 144
Query: 280 NEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGS 339
V ++SK+ G+ +K V +F+ A Q +I DE+D+ R +
Sbjct: 145 AVFINVRISNLMSKWFGDAQKLVSAVFSLAHKLQPA--------IIFIDEVDSFLGQRRT 196
Query: 340 TRDGTGVHDSIVN---QLLTKIDGVEALNN--VLLIGMTNRKDLLDEALLRPGRLEVHIE 394
T H+++ N + ++ DG N V+++ TNR LDEA+LR R E
Sbjct: 197 TD-----HEAMTNMKTEFMSLWDGFTTDQNARVMVLAATNRPSELDEAILR--RFTQIFE 249
Query: 395 INLPDENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYAL 453
I +P ++ R +IL++ + + + PN+N +A + ++G+++ + K A Y +
Sbjct: 250 IGIPVQSERSKILRV----VLKGENVEPNINYDYIAGLCEGFTGSDILELCKQAAFYPI 304
>Os02g0740300 AAA ATPase domain containing protein
Length = 611
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 20/190 (10%)
Query: 247 KLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEV-LSKFVGETEKNVRDL 305
K + +L GPPGTGKT AR I K P + E+ +SK+ GE+E+ + +
Sbjct: 373 KFETNRPRAVLFEGPPGTGKTSSARVIAK--QAGVPLLYVPLEIIMSKYYGESERLLGSV 430
Query: 306 FADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS---IVNQLLTKIDGVE 362
F+ A D D +I DE+D+ +R S +H++ I++ +L +IDG E
Sbjct: 431 FSLA-------NDLPDGGIIFLDEVDSFASARDSE-----MHEATRRILSVILRQIDGFE 478
Query: 363 ALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSP 422
V++I TNRK+ LD AL+ R + I +LPD+ R +I + + +S
Sbjct: 479 QDRRVVVIAATNRKEDLDPALI--SRFDSIICFDLPDQQTRAEISAQYAKHLTKSELFQF 536
Query: 423 NVNLQELAAR 432
++ +E++ R
Sbjct: 537 SLATEEMSGR 546
>Os01g0623500 AAA ATPase domain containing protein
Length = 812
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 29/211 (13%)
Query: 250 IKHVKGILLYGPPGTGKTLM-----ARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRD 304
+K KG+LL+GPPGTGKT++ LN ++ + SK+ GE+EK ++
Sbjct: 500 LKPCKGVLLFGPPGTGKTMLAKALANAAGASFLN------ISMASMTSKWYGESEKCIQA 553
Query: 305 LFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEAL 364
LF+ A +I DE+D++ R + + + N+ + DG+ +
Sbjct: 554 LFSLAAKLAPA--------IIFIDEVDSMLGKRDNHSENEASR-RVKNEFMAHWDGLLSK 604
Query: 365 NN--VLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSP 422
+N +L++ TNR LD+A++R R E I + LP R IL+ +K
Sbjct: 605 SNERILVLAATNRPFDLDDAVIR--RFEHRIMVGLPTLESRELILKTLLSKETVE----- 657
Query: 423 NVNLQELAARTKNYSGAELEGVVKSAVSYAL 453
N++ +ELA T+ Y+ ++L+ + +A + +
Sbjct: 658 NIDFKELAKMTEGYTSSDLKNICVTAAYHPV 688
>Os11g0661400 AAA ATPase, central region domain containing protein
Length = 241
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 24/173 (13%)
Query: 290 VLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS 349
+ SK+ GE EK V+ +F+ A + VI DE+D++ R+ G H++
Sbjct: 10 ITSKWFGEGEKYVKAVFSLASKIAPS--------VIFIDEVDSML----GRRENPGEHEA 57
Query: 350 I---VNQLLTKIDGVEALNN--VLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRL 404
+ N+ + DG+ + VL++G TNR LDEA++R R + +NLPD + R
Sbjct: 58 MRKMKNEFMVNWDGLRTKDKERVLVLGATNRPFDLDEAVIR--RFPRRLMVNLPDASNRE 115
Query: 405 QILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQI 457
+IL++ K + L+P +++ LA T YSG++L+ + +A Y + R+I
Sbjct: 116 KILKVILAKEE----LAPGIDMDSLATMTDGYSGSDLKNLCVTAAHYPI-REI 163
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,477,828
Number of extensions: 880681
Number of successful extensions: 2626
Number of sequences better than 1.0e-10: 51
Number of HSP's gapped: 2476
Number of HSP's successfully gapped: 57
Length of query: 743
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 635
Effective length of database: 11,396,689
Effective search space: 7236897515
Effective search space used: 7236897515
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)