BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0376200 Os05g0376200|Os05g0376200
(391 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0376200 Similar to Cell division control protein 48 ho... 745 0.0
Os04g0498800 Similar to Cell division control protein 48 ho... 713 0.0
AK119311 282 2e-76
Os03g0151800 Similar to Cell division control protein 48 ho... 282 3e-76
Os08g0413000 Similar to Valosin-containing protein (Fragment) 276 2e-74
AK109969 261 7e-70
Os06g0109400 AAA ATPase domain containing protein 223 1e-58
Os02g0205300 Similar to TAT-binding protein homolog (Fragment) 178 5e-45
Os06g0600100 Similar to TAT-binding protein homolog (Fragment) 178 6e-45
Os04g0617600 Similar to Cdc48 cell division control protein... 167 1e-41
Os06g0192600 26S proteasome regulatory particle triple-A AT... 166 3e-41
Os02g0803700 Similar to 26S protease regulatory subunit 6A ... 161 6e-40
Os06g0173100 Similar to 26S protease regulatory subunit 6A ... 160 1e-39
Os06g0725900 Similar to Cell division protein ftsH homolog,... 160 2e-39
Os07g0691800 Similar to 26S proteasome subunit 4-like prote... 159 4e-39
Os02g0325100 Similar to 26S protease regulatory subunit 6B ... 158 6e-39
Os03g0298400 Similar to 26S proteasome subunit 4-like prote... 158 7e-39
AK110388 155 3e-38
Os02g0649700 Peptidase M41, FtsH extracellular domain conta... 154 1e-37
Os06g0669400 Similar to FtsH protease (VAR2) (Zinc dependen... 150 2e-36
Os04g0284600 Similar to TAT-binding protein 1 (Fragment) 146 2e-35
Os09g0515100 Similar to Cdc48 cell division control protein... 146 3e-35
Os05g0458400 Similar to AAA-metalloprotease FtsH 144 1e-34
AK119842 143 3e-34
Os06g0607800 Similar to 26S proteasome regulatory complex s... 142 3e-34
Os02g0199900 Similar to 26S proteasome regulatory complex s... 142 4e-34
Os01g0842600 Similar to AAA-metalloprotease FtsH 140 1e-33
Os01g0574500 Peptidase M41, FtsH domain containing protein 140 1e-33
AK110513 138 9e-33
Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.... 137 2e-32
Os09g0560200 Similar to 26S protease regulatory subunit 6B ... 136 3e-32
Os02g0784700 Similar to 26S protease regulatory subunit 7 (... 135 6e-32
Os01g0683100 Similar to Katanin p60 ATPase-containing subun... 130 2e-30
Os01g0141300 129 4e-30
AK110158 128 8e-30
Os01g0757400 Similar to Katanin p60 ATPase-containing subun... 127 2e-29
Os06g0229066 Twin-arginine translocation pathway signal dom... 126 3e-29
Os01g0673500 Similar to Katanin p60 ATPase-containing subun... 124 1e-28
Os05g0519400 Similar to N-ethylmaleimide sensitive factor N... 117 2e-26
Os03g0344700 AAA ATPase domain containing protein 117 2e-26
Os07g0672500 SMAD/FHA domain containing protein 114 9e-26
Os05g0584600 AAA ATPase domain containing protein 114 2e-25
Os06g0130000 Similar to Tobacco mosaic virus helicase domai... 112 4e-25
Os01g0226400 AAA ATPase domain containing protein 112 7e-25
Os01g0623500 AAA ATPase domain containing protein 105 5e-23
Os06g0714500 AAA ATPase domain containing protein 97 2e-20
Os10g0442600 Similar to Cell division control protein 48 ho... 96 4e-20
Os06g0225900 AAA ATPase domain containing protein 89 4e-18
Os02g0740300 AAA ATPase domain containing protein 82 5e-16
Os11g0661400 AAA ATPase, central region domain containing p... 82 5e-16
Os04g0466100 Similar to Cell division protein FtsH-like pro... 82 7e-16
Os01g0618800 AAA ATPase, central region domain containing p... 74 3e-13
>Os05g0376200 Similar to Cell division control protein 48 homolog B (AtCDC48b)
Length = 391
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/391 (94%), Positives = 370/391 (94%)
Query: 1 MDGKSSKLLPHLVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHL 60
MDGKSSKLLPHLVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHL
Sbjct: 1 MDGKSSKLLPHLVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHL 60
Query: 61 GECVDLQSVAASCNGYLGADLQALCREAARRAYGRLSSSSESENVLTLIMEDWESAKSVA 120
GECVDLQSVAASCNGYLGADLQALCREAARRAYGRLSSSSESENVLTLIMEDWESAKSVA
Sbjct: 61 GECVDLQSVAASCNGYLGADLQALCREAARRAYGRLSSSSESENVLTLIMEDWESAKSVA 120
Query: 121 KNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGP 180
KNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGP
Sbjct: 121 KNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGP 180
Query: 181 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEA 240
PGC GAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEA
Sbjct: 181 PGCSKTTLAKAAAHAAQASFFSLSGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEA 240
Query: 241 DAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRP 300
DAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRP
Sbjct: 241 DAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRP 300
Query: 301 GRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEA 360
GRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEA
Sbjct: 301 GRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEA 360
Query: 361 ALRSLRPSLTQSVVDEYSNAAIHGPLTRRKH 391
ALRSLRPSLTQSVVDEYSNAAIHGPLTRRKH
Sbjct: 361 ALRSLRPSLTQSVVDEYSNAAIHGPLTRRKH 391
>Os04g0498800 Similar to Cell division control protein 48 homolog B (AtCDC48b)
Length = 578
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/413 (87%), Positives = 367/413 (88%), Gaps = 22/413 (5%)
Query: 1 MDGKSSKLLPHLVV-ASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLH 59
MDGKSSKLLPHLVV ASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLH
Sbjct: 166 MDGKSSKLLPHLVVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLH 225
Query: 60 LGECVDLQSVAASCNGYLGADLQALCREAARRAYGRLSSSSESENVLTLIMEDWESAKSV 119
LGECVDLQSVAASCNGY+GADLQALCREAARRAYGRLSSSSESENVLTLIMEDWESAKSV
Sbjct: 226 LGECVDLQSVAASCNGYVGADLQALCREAARRAYGRLSSSSESENVLTLIMEDWESAKSV 285
Query: 120 AKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHG 179
AKNSVTRGV KEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHG
Sbjct: 286 AKNSVTRGVTKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHG 345
Query: 180 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDE 239
PPGC GAELYSKYVGEGEALLRRTFQMARLASPSIIFFDE
Sbjct: 346 PPGCSKTTLAKAAAHAAQASFFSLSGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDE 405
Query: 240 ADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLR 299
ADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLR
Sbjct: 406 ADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLR 465
Query: 300 PGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKS- 358
PGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGL ++
Sbjct: 466 PGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLCREAG 525
Query: 359 --------------------EAALRSLRPSLTQSVVDEYSNAAIHGPLTRRKH 391
+AALRSLRPSLTQSVVDEYSNAAIHGPLTRRKH
Sbjct: 526 MAALRESLRSERFVCDDIHFQAALRSLRPSLTQSVVDEYSNAAIHGPLTRRKH 578
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 115/221 (52%), Gaps = 13/221 (5%)
Query: 140 IGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXXXXXXX 199
I G +AV + L++ V +P+ +A LG++ RG+LLHGP G
Sbjct: 37 IAGNRAVLEALRELVMYPVLYAREARVLGLNFPRGLLLHGPSGTGKKSMVRAVVRECNAH 96
Query: 200 XXXXXGAELYSKYVGEGEALLRRTF----QMARLASPSIIFFDEADAIAPKRTGPSGNSS 255
++ + GEGE +R F A P++IF DE D I P P G+
Sbjct: 97 LTVIDSISVHKPHAGEGEKFMREAFTEAYSQASQGRPAVIFIDELDDICP----PRGSRR 152
Query: 256 GNATVGERLLSTLLTEMDGL--ELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPD 313
G R++ LLT MDG +L ++V+A+ R +AI++AL RPGRFD + V P
Sbjct: 153 EQ---GSRIVGQLLTLMDGKSSKLLPHLVVVASATRVDAIESALRRPGRFDSEIEVTVPT 209
Query: 314 AEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGL 354
AE R+EIL+++T+ + LG+ VDL VA + GADL+ L
Sbjct: 210 AEERFEILKLYTKNLHLGECVDLQSVAASCNGYVGADLQAL 250
>AK119311
Length = 805
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 227/383 (59%), Gaps = 21/383 (5%)
Query: 1 MDGKSSKLLPHLVVASAT-RVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLH 59
MDG K H++V +AT R ++I+ ALRR GRFD EI++ +P A R EIL+++TKN+
Sbjct: 330 MDG--LKQSSHVIVMAATNRPNSIDGALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK 387
Query: 60 LGECVDLQSVAASCNGYLGADLQALCREAARRAYGRLSS---------SSESENVLTLIM 110
L + VDL+ +AA +G++GADL +LC E+A + +E N L + M
Sbjct: 388 LADDVDLEQIAAETHGHVGADLASLCSESALQQIREKMDLIDLEDDQIDAEVLNSLAVTM 447
Query: 111 EDWESAKSVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGIS 170
E++ A + S R + E+P +W D+GGL+ VK++LQ+ V++P++H F + G+
Sbjct: 448 ENFRYAMGKSSPSALRETVVEVPNATWADVGGLENVKRELQELVQYPVEHPDKFLKFGMQ 507
Query: 171 PIRGVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLA 230
P RGVL +GPPGC G EL + + GE EA +R F AR A
Sbjct: 508 PSRGVLFYGPPGCGKMLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDKARSA 567
Query: 231 SPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRP 290
+P ++FFDE D+IA R G G++ G A +R+++ +LTEMDG+ + ++ ATNRP
Sbjct: 568 APCVLFFDELDSIAKSRGGNVGDAGGAA---DRVINQILTEMDGMGAKKNVFIIGATNRP 624
Query: 291 NAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGAD 350
+ ID A+LRPGR D ++Y+P PD + R I R + RK P+ DDVDL +A+ T F+GAD
Sbjct: 625 DIIDPAILRPGRLDQLIYIPLPDEKSREAIFRANMRKSPVADDVDLAYIAKVTHGFSGAD 684
Query: 351 LEGLEGKSEAALRSLRPSLTQSV 373
L +E R+ + ++ QS+
Sbjct: 685 L------TEVCQRACKLAIRQSI 701
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 142/236 (60%), Gaps = 8/236 (3%)
Query: 134 AVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXX 193
AV +DDIGG + ++++ VE P++H + F +G+ P RG+LL+GPPG
Sbjct: 198 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 257
Query: 194 XXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGN 253
G E+ SK GE E+ LR+ F+ A SPSIIF DE DAIAPKR G
Sbjct: 258 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKREKTHGE 317
Query: 254 SSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPD 313
V R++S LLT MDGL+ ++ +IV+AATNRPN+ID AL R GRFD + + PD
Sbjct: 318 ------VERRIVSQLLTLMDGLKQSSHVIVMAATNRPNSIDGALRRFGRFDREIDIGIPD 371
Query: 314 AEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAALRSLRPSL 369
A GR EILRIHT+ M L DDVDL ++A T GADL L SE+AL+ +R +
Sbjct: 372 ATGRLEILRIHTKNMKLADDVDLEQIAAETHGHVGADLASL--CSESALQQIREKM 425
>Os03g0151800 Similar to Cell division control protein 48 homolog A (AtCDC48a)
Length = 809
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 220/361 (60%), Gaps = 15/361 (4%)
Query: 1 MDGKSSKLLPHLVVASAT-RVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLH 59
MDG ++ H++V AT R ++I+ ALRR GRFD EI++ VP R E+L+++TKN+
Sbjct: 338 MDGLKAR--SHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMK 395
Query: 60 LGECVDLQSVAASCNGYLGADLQALCREAARRAYGRL---------SSSSESENVLTLIM 110
L E VDL+ +A +GY+GADL ALC EAA + + +E N + +
Sbjct: 396 LAEDVDLEHIAKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTN 455
Query: 111 EDWESAKSVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGIS 170
+ +++A + S R + E+P VSW+DIGGL+ VK++LQ+ V++P++H F++ G+S
Sbjct: 456 DHFKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 515
Query: 171 PIRGVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLA 230
P +GVL +GPPGC G EL + + GE EA +R F AR +
Sbjct: 516 PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS 575
Query: 231 SPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRP 290
+P ++FFDE D+IA +R G++ G A +R+L+ LLTEMDG+ + ++ ATNRP
Sbjct: 576 APCVLFFDELDSIATQRGSSVGDAGGAA---DRVLNQLLTEMDGMNAKKTVFIIGATNRP 632
Query: 291 NAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGAD 350
+ ID ALLRPGR D ++Y+P PD + R +I + RK P+ DVDL +A+ T+ F+GAD
Sbjct: 633 DIIDPALLRPGRLDQLIYIPLPDDQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGAD 692
Query: 351 L 351
+
Sbjct: 693 I 693
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 139/235 (59%), Gaps = 8/235 (3%)
Query: 135 VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXX 194
V +DD+GG++ ++++ VE P++H F +G+ P +G+LL+GPPG
Sbjct: 207 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 266
Query: 195 XXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNS 254
G E+ SK GE E+ LR+ F+ A +PSIIF DE D+IAPKR G
Sbjct: 267 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE- 325
Query: 255 SGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDA 314
V R++S LLT MDGL+ + +IV+ ATNRPN+ID AL R GRFD + + PD
Sbjct: 326 -----VERRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDE 380
Query: 315 EGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAALRSLRPSL 369
GR E+LRIHT+ M L +DVDL +A+ T + GADL L +EAAL+ +R +
Sbjct: 381 VGRLEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAAL--CTEAALQCIREKM 433
>Os08g0413000 Similar to Valosin-containing protein (Fragment)
Length = 848
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 210/352 (59%), Gaps = 15/352 (4%)
Query: 12 LVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHLGECVDLQSVAA 71
+V+ + R ++++ ALRR GRFD E+++ VP R EIL+++TKN+ L + VDL+ V
Sbjct: 353 IVIGATNRPNSLDPALRRFGRFDRELDIGVPDELGRLEILRIHTKNMPLSDDVDLERVGK 412
Query: 72 SCNGYLGADLQALCREAARRAYGRLSSSSESEN---------VLTLIMEDWESAKSVAKN 122
+G++G+DL +LC EAA + + EN LT+ M+ + A V K
Sbjct: 413 DTHGFVGSDLASLCSEAAMQCIREKLDIIDIENDTIDVEILNSLTVTMDHLKFAMEVTKP 472
Query: 123 SVTRGV-IKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPP 181
S R I E+P VSWDDIGGL VK++LQ+ V++P++H FD G+SP RGVL +GPP
Sbjct: 473 SALRETGIVEVPKVSWDDIGGLGEVKRELQETVQYPVEHPEMFDLFGMSPSRGVLFYGPP 532
Query: 182 GCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEAD 241
GC G EL + + GE E +R F AR ++P I+FFDE D
Sbjct: 533 GCGKTMMAKAIAKECKANFISIKGPELLTMWFGESEGNVRNLFDKARQSAPCILFFDELD 592
Query: 242 AIAPKRTGPSGNSSGNAT-VGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRP 300
+IA KR GNS G+A +R+L+ LLTEMDG+ + V+ ATNRP+ ID A+LRP
Sbjct: 593 SIAVKR----GNSVGDAGGTPDRVLNQLLTEMDGINAKKTVFVIGATNRPDIIDPAMLRP 648
Query: 301 GRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLE 352
GR D ++Y+P PDA R EI R + RK P+ VDL +A T+ F+GAD++
Sbjct: 649 GRLDQLIYIPLPDASSRLEIFRANLRKAPMSRHVDLPAMAASTDGFSGADIK 700
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 134/233 (57%), Gaps = 8/233 (3%)
Query: 137 WDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXXXX 196
+DD+GG++ ++++ VE P++H F LG+ P +G+LL+GPPG
Sbjct: 214 YDDVGGVRKQLAQIRELVELPLRHPKLFQTLGVRPPKGILLYGPPGTGKTLLARAIAAES 273
Query: 197 XXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNSSG 256
G E+ S GE EA LR F A A+PSI+F DE D+IAP R G
Sbjct: 274 GAHFVVVNGPEIMSGMPGESEANLRAVFAEADAAAPSIVFMDEIDSIAPSREKAHGE--- 330
Query: 257 NATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEG 316
V R++S LLT MDGL +IV+ ATNRPN++D AL R GRFD L + PD G
Sbjct: 331 ---VERRVVSQLLTLMDGLRPRAQVIVIGATNRPNSLDPALRRFGRFDRELDIGVPDELG 387
Query: 317 RYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAALRSLRPSL 369
R EILRIHT+ MPL DDVDL +V + T F G+DL L SEAA++ +R L
Sbjct: 388 RLEILRIHTKNMPLSDDVDLERVGKDTHGFVGSDLASL--CSEAAMQCIREKL 438
>AK109969
Length = 882
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 215/361 (59%), Gaps = 15/361 (4%)
Query: 1 MDGKSSKLLPHLVVASAT-RVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLH 59
MDG ++ ++VV +AT R ++I+ ALRR GRFD E+++ +P R EIL+++TKN+
Sbjct: 389 MDGLKAR--SNIVVMAATNRPNSIDPALRRFGRFDREVDIAIPDPTGRLEILRIHTKNMK 446
Query: 60 LGECVDLQSVAASCNGYLGADLQALCREAARRAY---------GRLSSSSESENVLTLIM 110
L E VDL+ +AA +GY+G+D+ ALC EAA + + +E + L + M
Sbjct: 447 LAEDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTM 506
Query: 111 EDWESAKSVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGIS 170
E++ A V+ S R + E+P +W+DIGGL+ VK++LQ+ V +P++H F + G++
Sbjct: 507 ENFRFALGVSNPSALRETVVEVPTTTWNDIGGLEKVKQELQETVSYPVEHPEKFLKYGMA 566
Query: 171 PIRGVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLA 230
P +GVL +GPPG G EL + + GE EA +R F AR A
Sbjct: 567 PSKGVLFYGPPGTGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAA 626
Query: 231 SPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRP 290
+P ++FFDE DAIA R +S + G+R+++ +LTEMDG+ + ++ ATNRP
Sbjct: 627 APCVMFFDELDAIAKAR---GSSSGDSGGAGDRVINQILTEMDGVSSRKNVFIIGATNRP 683
Query: 291 NAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGAD 350
+ ID A+LRPGR D ++Y+P PD R IL+ +K P+ DVDL +A+ T F+GAD
Sbjct: 684 DQIDPAILRPGRLDQLIYIPLPDEPSRLSILKATLKKSPIAADVDLTFLAKHTHGFSGAD 743
Query: 351 L 351
L
Sbjct: 744 L 744
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 142/242 (58%), Gaps = 8/242 (3%)
Query: 135 VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXX 194
V +DDIGG + ++++ VE P++H F +GI P RGVL++GPPG
Sbjct: 258 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLMYGPPGTGKTLMARAVAN 317
Query: 195 XXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNS 254
G E+ SK GE E+ LR+ F+ A SP+II+ DE D+IAPKR
Sbjct: 318 ETRAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIYIDEIDSIAPKR------E 371
Query: 255 SGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDA 314
N V R++S LLT MDGL+ + I+V+AATNRPN+ID AL R GRFD + + PD
Sbjct: 372 KTNGEVERRVVSQLLTLMDGLKARSNIVVMAATNRPNSIDPALRRFGRFDREVDIAIPDP 431
Query: 315 EGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAALRSLRPSLTQSVV 374
GR EILRIHT+ M L +DVDL ++A T + G+D+ L SEAA++ +R + +
Sbjct: 432 TGRLEILRIHTKNMKLAEDVDLEQIAAETHGYVGSDVAAL--CSEAAMQQIREKMDLIDL 489
Query: 375 DE 376
DE
Sbjct: 490 DE 491
>Os06g0109400 AAA ATPase domain containing protein
Length = 770
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 197/383 (51%), Gaps = 33/383 (8%)
Query: 12 LVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHLGECVDLQSVAA 71
+V+ + R DA++ ALRRPGRFD EI + VP R +IL + T+NL L +DL +A
Sbjct: 346 IVIGATNRPDAVDQALRRPGRFDREISLGVPDEYARKKILMMLTRNLRLEGQLDLLKIAR 405
Query: 72 SCNGYLGADLQALCREAARRAYGRL-------SSSSESENV----------------LTL 108
+ + ++GADL+AL +A A R+ EN L++
Sbjct: 406 ATSSFVGADLKALVDKAGNLAMKRIIDRRRAQFCQEHDENSKHDWWRQPWDANEIEGLSI 465
Query: 109 IMEDWESAKSVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLG 168
M+D+E A + + S+ R IP V+WDD+GGL +++K+ + + IK + G
Sbjct: 466 TMDDFEEATKMVQPSLRREGFSSIPDVTWDDVGGLDSLRKEFDRYIIRCIKQPEEYKTFG 525
Query: 169 ISPIRGVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMAR 228
++ G LL GPPGC G EL +KYVGE E+ +R+ F A+
Sbjct: 526 LNMQAGFLLFGPPGCGKTLIAKAVAHEAGANFIHIKGPELLNKYVGESESEVRKIFIRAQ 585
Query: 229 LASPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATN 288
+P I+FFDE DA+ KR G V ERLL+ LL E+DG G+ V+ ATN
Sbjct: 586 TNTPCILFFDEVDALTTKRGKEGG------WVVERLLNQLLIELDGAGERKGVFVIGATN 639
Query: 289 RPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTEL--F 346
R + ID A LRPGRF YVP P A+ R ILR R P+ VDL +A R E
Sbjct: 640 RIDVIDDAALRPGRFGKKHYVPLPGADERVSILRALARNKPISSSVDLGALARREECKNL 699
Query: 347 TGADLEGLEGKSEAALRSLRPSL 369
TGADL + +EAA+ +L L
Sbjct: 700 TGADLASM--VNEAAMAALEERL 720
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 118/240 (49%), Gaps = 23/240 (9%)
Query: 136 SWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXXX 195
++ D+GG+++V ++L V P+ H LG+ P+ G+LLHGPPGC
Sbjct: 189 TFSDLGGMESVIEQLMMEVVVPLCHPEVPRWLGVKPVAGLLLHGPPGCGKTTLAHAIANE 248
Query: 196 XXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNSS 255
E+ S G E +R F+ A +PSI+F DE DAIA KR +
Sbjct: 249 TGVPFYKISAPEVVSGVSGASEENIRSLFKKAYRTAPSIVFIDEIDAIASKR------EN 302
Query: 256 GNATVGERLLSTLLTEMDGLELATG-----------------IIVLAATNRPNAIDAALL 298
+ R+++ L+T MD G +IV+ ATNRP+A+D AL
Sbjct: 303 LQREMERRIVTQLMTCMDEYHQQIGSGSGDVGSESAEKKPGYVIVIGATNRPDAVDQALR 362
Query: 299 RPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKS 358
RPGRFD + + PD R +IL + TR + L +DL K+A T F GADL+ L K+
Sbjct: 363 RPGRFDREISLGVPDEYARKKILMMLTRNLRLEGQLDLLKIARATSSFVGADLKALVDKA 422
>Os02g0205300 Similar to TAT-binding protein homolog (Fragment)
Length = 424
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 146/244 (59%), Gaps = 3/244 (1%)
Query: 129 IKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXX 188
++++P ++D IGGL K++++ +E PIKH F+ LGI+ +GVLL+GPPG
Sbjct: 157 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 216
Query: 189 XXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRT 248
G+EL KY+GEG ++R F MAR +PSIIF DE D+I R
Sbjct: 217 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 276
Query: 249 GPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLY 308
SG +G++ V +R + LL ++DG E + I VL ATNR + +D ALLRPGR D +
Sbjct: 277 -ESGTGNGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 334
Query: 309 VPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEA-ALRSLRP 367
P P+ + R++IL+IH+RKM L +DL K+AE+ +GA+L+ + ++ ALR R
Sbjct: 335 FPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRV 394
Query: 368 SLTQ 371
+TQ
Sbjct: 395 HVTQ 398
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 13 VVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHLGECVDLQSVAAS 72
V+ + R+D ++ AL RPGR D +IE P + RF+ILK++++ ++L +DL+ +A
Sbjct: 309 VLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEK 368
Query: 73 CNGYLGADLQALCREAARRAYGRLSSSSESENVLTLIMEDWESA 116
NG GA+L+A+C EA A E + + ED+E A
Sbjct: 369 MNGASGAELKAVCTEAGMFAL--------RERRVHVTQEDFEMA 404
>Os06g0600100 Similar to TAT-binding protein homolog (Fragment)
Length = 423
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 144/238 (60%), Gaps = 4/238 (1%)
Query: 129 IKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXX 188
++++P ++D IGGL K++++ +E PIKH F+ LGI+ +GVLL+GPPG
Sbjct: 156 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 215
Query: 189 XXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRT 248
G+EL KY+GEG ++R F MAR +PSIIF DE D+I R
Sbjct: 216 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 275
Query: 249 GPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLY 308
SG+ G++ V +R + LL ++DG E + I VL ATNR + +D ALLRPGR D +
Sbjct: 276 -QSGSGGGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRMDILDQALLRPGRIDRKIE 333
Query: 309 VPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAALRSLR 366
P P+ + R++IL+IH+RKM L +DL K+AE+ +GA+L+ + +EA + +LR
Sbjct: 334 FPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAV--CTEAGMFALR 389
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 13 VVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHLGECVDLQSVAAS 72
V+ + R+D ++ AL RPGR D +IE P + RF+ILK++++ ++L +DL+ +A
Sbjct: 308 VLMATNRMDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEK 367
Query: 73 CNGYLGADLQALCREAA 89
NG GA+L+A+C EA
Sbjct: 368 MNGASGAELKAVCTEAG 384
>Os04g0617600 Similar to Cdc48 cell division control protein 48, AAA family
Length = 940
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 193/374 (51%), Gaps = 42/374 (11%)
Query: 12 LVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILK--LYTKNLHLGECVD---L 66
++VA+A R + + ++RR F EI + E+R ++ L+ + E ++ +
Sbjct: 509 ILVATADRAEGMPQSIRR--CFRHEINMKSINEEQRRNLISETLHCVSTSADESINDKFV 566
Query: 67 QSVAASCNGYLGADLQALCREAARRAYGRL-----------------SSSSESEN----- 104
+ +A +G++ D+ AL +A ++ +SSS S+N
Sbjct: 567 KDLAVQTSGFMPRDILALVADAGISFAHKVETDKNNSEGDKLKGILPTSSSSSQNEEKTF 626
Query: 105 VLTLIMEDWESAKSVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASF 164
I+ E AK +N G K +P V W+D+GGL+ VKK + ++ P+ + F
Sbjct: 627 CKEYILSSLERAKK--RNRAALGTPK-VPNVKWEDVGGLEEVKKVILDTIQLPLLYKHLF 683
Query: 165 D-RLGISPIRGVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRT 223
+LG GVLL+GPPG G EL + YVGE E +R
Sbjct: 684 SSKLGKR--SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYVGESEKNVRDI 741
Query: 224 FQMARLASPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGL-ELATGII 282
F+ AR A P +IFFDE D++AP R G+SS +A V +R++S LL E+DGL + + +
Sbjct: 742 FEKARSARPCVIFFDELDSLAPAR----GSSSDSAGVMDRVVSQLLVEIDGLSDNSQDLF 797
Query: 283 VLAATNRPNAIDAALLRPGRFDMVLYV-PPPDAEGRYEILRIHTRKMPLGDDVDLWKVAE 341
++ ATNRP+ +D+ALLRPGRFD +LYV DA R IL+ TRK L ++V L +A+
Sbjct: 798 IIGATNRPDLLDSALLRPGRFDKLLYVGVNSDASYRERILKAQTRKYKLHENVSLLSIAQ 857
Query: 342 RT-ELFTGADLEGL 354
+ FTGAD+ L
Sbjct: 858 QCPPNFTGADIYAL 871
>Os06g0192600 26S proteasome regulatory particle triple-A ATPase subunit1 (26S
protease regulatory subunit 7)
Length = 426
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 140/265 (52%), Gaps = 8/265 (3%)
Query: 123 SVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPG 182
SVT ++E P V+++D+GG K +K+++ VE P+ H F +LGI P +GVL +GPPG
Sbjct: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
Query: 183 CXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADA 242
G+EL KYVGEG ++R FQMAR I+FFDE DA
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
Query: 243 IAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGR 302
I R + G +R + ++ ++DG + I VL ATNRP+ +D ALLRPGR
Sbjct: 273 IGGARFD---DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
Query: 303 FDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEA-- 360
D + PD EGR +I +IHTR M D+ +A TGAD+ + +EA
Sbjct: 330 LDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSV--CTEAGM 387
Query: 361 -ALRSLRPSLTQSVVDEYSNAAIHG 384
A+R+ R ++T+ + N I G
Sbjct: 388 YAIRARRKTVTEKDFLDAVNKVIKG 412
>Os02g0803700 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1)
Length = 429
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 137/255 (53%), Gaps = 5/255 (1%)
Query: 129 IKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXX 188
+ E P ++DIGGL+ ++L +A+ P+ H F +LGI P +GVLL+GPPG
Sbjct: 167 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLM 226
Query: 189 XXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRT 248
G +L ++G+G L+R FQ+A+ SP IIF DE DAI KR
Sbjct: 227 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 286
Query: 249 GPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLY 308
SG+ V +R + LL ++DG I V+AATNR + +D AL+R GR D +
Sbjct: 287 --DSEVSGDREV-QRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIE 343
Query: 309 VPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAALRSLRPS 368
P P E R IL+IH+RKM + DV+ ++A T+ F GA L+ + EA + +LR
Sbjct: 344 FPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAV--CVEAGMLALRRD 401
Query: 369 LTQSVVDEYSNAAIH 383
T+ ++++ I
Sbjct: 402 ATEVTHEDFNEGIIQ 416
>Os06g0173100 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
(LEMA-1)
Length = 429
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 137/255 (53%), Gaps = 5/255 (1%)
Query: 129 IKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXX 188
+ E P ++DIGGL+ ++L +A+ P+ H F +LGI P +GVLL+GPPG
Sbjct: 167 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLM 226
Query: 189 XXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRT 248
G +L ++G+G L+R FQ+A+ +P IIF DE DAI KR
Sbjct: 227 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRF 286
Query: 249 GPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLY 308
SG+ V +R + LL ++DG I V+AATNR + +D AL+R GR D +
Sbjct: 287 --DSEVSGDREV-QRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIE 343
Query: 309 VPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAALRSLRPS 368
P P E R IL+IH+RKM + DV+ ++A T+ F GA L+ + EA + +LR
Sbjct: 344 FPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAV--CVEAGMLALRRD 401
Query: 369 LTQSVVDEYSNAAIH 383
T+ ++++ I
Sbjct: 402 ATEVTHEDFNEGIIQ 416
>Os06g0725900 Similar to Cell division protein ftsH homolog, chloroplast
precursor (EC 3.4.24.-) (DS9)
Length = 686
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 146/266 (54%), Gaps = 11/266 (4%)
Query: 125 TRGVIKEIP--AVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPG 182
++ +E+P V++ D+ G K +LQ+ V++ +K+ + LG +G LL GPPG
Sbjct: 217 SKSKFQEVPETGVTFVDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPG 275
Query: 183 CXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADA 242
+E +VG G + +R F+ A+ +P I+F DE DA
Sbjct: 276 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEIDA 335
Query: 243 IAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGR 302
+ +R +G GN E+ ++ LLTEMDG +G+IVLAATNRP+ +DAALLRPGR
Sbjct: 336 VGRQRG--AGLGGGNDER-EQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGR 392
Query: 303 FDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAAL 362
FD + V PD GR +IL +H+R L DVD K+A RT FTGADL+ L +EAA+
Sbjct: 393 FDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNL--MNEAAI 450
Query: 363 RSLRPSLTQSVVDEYSNA---AIHGP 385
+ R L + DE S+A I GP
Sbjct: 451 LAARRDLKEISKDEISDALERIIAGP 476
>Os07g0691800 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 448
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 147/263 (55%), Gaps = 12/263 (4%)
Query: 104 NVLTLIMEDWESAKSVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAAS 163
+V+ ++ ++ + SV K +++ P S+ DIGGL A +++++AVE P+ H
Sbjct: 166 SVVGILQDEVDPMVSVMK-------VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPEL 218
Query: 164 FDRLGISPIRGVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRT 223
++ +GI P +GV+L+G PG G+EL KY+G+G L+R
Sbjct: 219 YEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVREL 278
Query: 224 FQMARLASPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIV 283
F++A SPSI+F DE DA+ KR +S G + +R + LL ++DG + + V
Sbjct: 279 FRVADELSPSIVFIDEIDAVGTKRY--DAHSGGEREI-QRTMLELLNQLDGFDSRGDVKV 335
Query: 284 LAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERT 343
+ ATNR ++D ALLRPGR D + P PD + R I +IHT KM L DDV+L +
Sbjct: 336 ILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTK 395
Query: 344 ELFTGADLEGLEGKSEAALRSLR 366
+ F+GAD++ + +EA L +LR
Sbjct: 396 DEFSGADIKAI--CTEAGLLALR 416
>Os02g0325100 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7)
Length = 419
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 5/236 (2%)
Query: 131 EIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXX 190
E P V++ DIGG K+++++AVE P+ H + ++GI P RGVLL+GPPG
Sbjct: 159 EKPNVTYTDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAK 218
Query: 191 XXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGP 250
G+E KY+GEG ++R F++A+ +P+IIF DE DAIA R
Sbjct: 219 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDA 278
Query: 251 SGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVP 310
+G +R+L LL +MDG + + V+ ATNR + +D ALLRPGR D + P
Sbjct: 279 Q---TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 335
Query: 311 PPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAALRSLR 366
PD + + ++ T KM L D+VDL R + + AD+ + EA + ++R
Sbjct: 336 LPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADIAAI--CQEAGMHAVR 389
>Os03g0298400 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 450
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 147/263 (55%), Gaps = 12/263 (4%)
Query: 104 NVLTLIMEDWESAKSVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAAS 163
+V+ ++ ++ + SV K +++ P S+ DIGGL A +++++AVE P+ H
Sbjct: 168 SVVGILQDEVDPMVSVMK-------VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPEL 220
Query: 164 FDRLGISPIRGVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRT 223
++ +GI P +GV+L+G PG G+EL KY+G+G L+R
Sbjct: 221 YEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVREL 280
Query: 224 FQMARLASPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIV 283
F++A SPSI+F DE DA+ KR +S G + +R + LL ++DG + + V
Sbjct: 281 FRVADDLSPSIVFIDEIDAVGTKRY--DAHSGGEREI-QRTMLELLNQLDGFDSRGDVKV 337
Query: 284 LAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERT 343
+ ATNR ++D ALLRPGR D + P PD + R I +IHT KM L DDV+L +
Sbjct: 338 ILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTK 397
Query: 344 ELFTGADLEGLEGKSEAALRSLR 366
+ F+GAD++ + +EA L +LR
Sbjct: 398 DEFSGADIKAI--CTEAGLLALR 418
>AK110388
Length = 957
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 128/229 (55%), Gaps = 14/229 (6%)
Query: 135 VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXX 194
V WDD+GGL+ KK++ + +E P+KH F G GVL++GPPGC
Sbjct: 654 VKWDDVGGLEEAKKEILETIELPLKHPELFSG-GAKQRAGVLMYGPPGCGKTLLAKAIAT 712
Query: 195 XXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNS 254
G EL + YVGE E +R FQ AR SP I FFDE DA+APKR G G+S
Sbjct: 713 EMGLNFISVKGPELINMYVGESEKNIRLLFQRARDNSPCICFFDELDALAPKR-GAKGDS 771
Query: 255 SGNATVGERLLSTLLTEMDGL-------ELATGIIVLAATNRPNAIDAALLRPGRFDMVL 307
G V +R+++ LL E+DG+ + + ++ ATNRP+ +D +LLRPGRFD +
Sbjct: 772 GG---VMDRIVAQLLAEVDGVGGTKSDGSASAQVFIIGATNRPDLLDPSLLRPGRFDRLC 828
Query: 308 YV-PPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTE-LFTGADLEGL 354
Y+ PP + + + ++ TRK L DVDL V E E +++GAD L
Sbjct: 829 YLGPPQNKKEQVAAVKALTRKFKLAPDVDLAAVVEPLEPVYSGADYFAL 877
>Os02g0649700 Peptidase M41, FtsH extracellular domain containing protein
Length = 822
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 136/246 (55%), Gaps = 9/246 (3%)
Query: 121 KNSVTRG--VIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLH 178
KNS + G V + V++ D+ G+ K++L++ VE+ +++ + RLG P RGVLL
Sbjct: 327 KNSNSGGAKVSESTDIVTFADVAGVDEAKEELEEIVEF-LRNPERYIRLGARPPRGVLLV 385
Query: 179 GPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFD 238
G PG +E YVG G A +R F A+ SPSIIF D
Sbjct: 386 GLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGAARVRDLFARAKKESPSIIFID 445
Query: 239 EADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALL 298
E DA+A R G S + E+ L+ LLTEMDG + + +IVL ATNR + +D AL
Sbjct: 446 EIDAVAKSRDGRYRIVSNDER--EQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALR 503
Query: 299 RPGRFDMVLYVPPPDAEGRYEILRIHT--RKMPLGDDVDLWKVAERTELFTGADLEGLEG 356
RPGRFD V+ V PD GR IL++H +++PLG DVDL +A T FTGADL L
Sbjct: 504 RPGRFDRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANL-- 561
Query: 357 KSEAAL 362
+EAAL
Sbjct: 562 VNEAAL 567
>Os06g0669400 Similar to FtsH protease (VAR2) (Zinc dependent protease)
Length = 609
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 136/255 (53%), Gaps = 11/255 (4%)
Query: 134 AVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXX 193
V++DD+ G+ K+ + VE+ +K F +G +GVLL GPPG
Sbjct: 143 GVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 201
Query: 194 XXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKR-TGPSG 252
G+E +VG G + +R F+ A+ +P I+F DE DA+ +R TG G
Sbjct: 202 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGG 261
Query: 253 NSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPP 312
+ E+ L+ LLTEMDG E TGIIV+AATNR + +D+ALLRPGRFD + V P
Sbjct: 262 GNDER----EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVP 317
Query: 313 DAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAAL---RSLRPSL 369
D GR EIL++H DV L +A RT F+GADL L +EAA+ R R ++
Sbjct: 318 DVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANL--LNEAAILAGRRGRTAI 375
Query: 370 TQSVVDEYSNAAIHG 384
+ +D+ + + G
Sbjct: 376 SSKEIDDSIDRIVAG 390
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 12 LVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHLGECVDLQSVAA 71
+V+A+ R D ++SAL RPGRFD ++ V VP R EILK++ N V L+ +A
Sbjct: 287 IVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAM 346
Query: 72 SCNGYLGADLQALCREAA----RRAYGRLSSSSESENVLTL-------IMEDWESAKSVA 120
G+ GADL L EAA RR +SS +++ + +M D +S VA
Sbjct: 347 RTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVA 406
Query: 121 KNSVTRGV 128
+ V +
Sbjct: 407 YHEVGHAI 414
>Os04g0284600 Similar to TAT-binding protein 1 (Fragment)
Length = 357
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 114/215 (53%), Gaps = 6/215 (2%)
Query: 140 IGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXXXXXXX 199
IGGL+ ++L +AV PI H F RLGI P +GVLL+GPPG
Sbjct: 116 IGGLEKQIEELVEAVVLPIIHKNCFQRLGIHPPKGVLLYGPPGTGKTLVAHAFASQTNAT 175
Query: 200 XXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNSSGNAT 259
G +L K +GEG L+R FQ+A+ +P IIF DE DAI K SG+ T
Sbjct: 176 FLKLTGPQLAVKLIGEGARLVRDAFQLAKEKAPCIIFIDEIDAIGSKHFD-SGDREVQQT 234
Query: 260 VGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYE 319
+ E LL ++DG+ I V+AATNRP +D A LR GR D + P P + R
Sbjct: 235 IVE-----LLNQLDGVGSYESIKVIAATNRPEVLDPAFLRSGRLDQKIEFPHPSEQARVR 289
Query: 320 ILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGL 354
IL IH+RKM DV+ ++A T+ F GA L+ +
Sbjct: 290 ILEIHSRKMDKNPDVNFEELACCTDDFNGAQLKAV 324
>Os09g0515100 Similar to Cdc48 cell division control protein 48, AAA family
Length = 1198
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 128/253 (50%), Gaps = 32/253 (12%)
Query: 134 AVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGC-----XXXXX 188
+VS++DIGGL L++ V +P+ + F I+P RGVLL GPPG
Sbjct: 360 SVSFNDIGGLSDYIDALKEMVFFPLLYPDFFANYHITPPRGVLLCGPPGTGKTLIARALA 419
Query: 189 XXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRT 248
GA++ SK+VGE E L+ F+ A+ PSIIFFDE D +AP R
Sbjct: 420 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVR- 478
Query: 249 GPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLY 308
SS + ++STLL MDGL+ ++++ ATNR +AID AL RPGRFD +
Sbjct: 479 -----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFF 533
Query: 309 VPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTEL----------FTGADLEGLEGKS 358
P P E R EIL IHTRK WK EL + GADL+ L +
Sbjct: 534 FPLPGYEARAEILDIHTRK---------WKDPPPKELKTELAASCVGYCGADLKAL--CT 582
Query: 359 EAALRSLRPSLTQ 371
EAA+R+ R Q
Sbjct: 583 EAAIRAFREKYPQ 595
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 12 LVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHLGECVDLQS-VA 70
+++ + R+DAI+ ALRRPGRFD E +P E R EIL ++T+ +L++ +A
Sbjct: 507 VLIGATNRIDAIDGALRRPGRFDREFFFPLPGYEARAEILDIHTRKWKDPPPKELKTELA 566
Query: 71 ASCNGYLGADLQALCREAARRAY 93
ASC GY GADL+ALC EAA RA+
Sbjct: 567 ASCVGYCGADLKALCTEAAIRAF 589
>Os05g0458400 Similar to AAA-metalloprotease FtsH
Length = 822
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 137/265 (51%), Gaps = 7/265 (2%)
Query: 118 SVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLL 177
++ K VT+ V + D+ G K+++ + V + +K+ ++ LG +G LL
Sbjct: 315 NIGKAQVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALL 373
Query: 178 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFF 237
GPPG G++ +VG G + +R FQ AR +PSIIF
Sbjct: 374 VGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFI 433
Query: 238 DEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAAL 297
DE DAI R G SG+ E L+ LL EMDG +G++VLA TNRP+ +D AL
Sbjct: 434 DEIDAIG--RARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKAL 491
Query: 298 LRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLW--KVAERTELFTGADLEGLE 355
LRPGRFD + + PD +GR +I RI+ +K+ L ++ + ++A T F GAD+ +
Sbjct: 492 LRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANV- 550
Query: 356 GKSEAALRSLRPSLTQSVVDEYSNA 380
+EAAL + R TQ + + +A
Sbjct: 551 -CNEAALIAARSEETQITMQHFESA 574
>AK119842
Length = 769
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 10/260 (3%)
Query: 105 VLTLIMEDWESAKSVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASF 164
++TL +E K V + T V E + D+ G K++ V++ +KH +
Sbjct: 259 LITLFVETSGVLKKVGAGT-TAEVRAEHQNTRFTDVHGCDEAKEEPLDVVDF-LKHPERY 316
Query: 165 DRLGISPIRGVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTF 224
++LG +GVLL GPPG G+E YVG G +R F
Sbjct: 317 NKLGGRLPKGVLLIGPPGTGKTLLARAVAGEAGVPFFYVSGSEFDEVYVGVGAKRVRELF 376
Query: 225 QMARLASPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVL 284
AR SP+I+F DE DA+ KR S +A + L+ LL ++DG + +TG+I +
Sbjct: 377 TAARAKSPAIVFIDELDAVGGKRV------SRDANYHRQTLNQLLNDLDGFDQSTGVIFI 430
Query: 285 AATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTE 344
AATN P +D+AL RPGRFD + V PD GR IL+ HT+K+ L ++DL +A T
Sbjct: 431 AATNHPELLDSALTRPGRFDRHVQVELPDVSGRLAILKYHTKKIRLNPEIDLSTIARGTP 490
Query: 345 LFTGADLEGLEGKSEAALRS 364
F+GA+LE L + AA+R+
Sbjct: 491 GFSGAELENL--ANSAAIRA 508
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 12 LVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHLGECVDLQSVAA 71
+ +A+ + ++SAL RPGRFD ++V +P R ILK +TK + L +DL ++A
Sbjct: 428 IFIAATNHPELLDSALTRPGRFDRHVQVELPDVSGRLAILKYHTKKIRLNPEIDLSTIAR 487
Query: 72 SCNGYLGADLQALCREAARRAYGRLSSSSESENVLTLIMEDWESAKSVAKNSVTRGVIKE 131
G+ GA+L+ L AA RA S ++L+ +W AK+ + G K
Sbjct: 488 GTPGFSGAELENLANSAAIRA------SKLQSKFVSLVDLEW------AKDKIMMGAEKR 535
Query: 132 IPAVSWDD 139
V D
Sbjct: 536 SRPVPLQD 543
>Os06g0607800 Similar to 26S proteasome regulatory complex subunit p42D
Length = 401
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 136/260 (52%), Gaps = 6/260 (2%)
Query: 122 NSVTRGVIKEIPA-VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGP 180
+ V ++ E P VS+ +GGL ++L++++E P+ + F R+GI P +GVLL+GP
Sbjct: 124 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPKLFLRVGIKPPKGVLLYGP 183
Query: 181 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEA 240
PG + + KY+GE L+R F AR P IIF DE
Sbjct: 184 PGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFSYAREHQPCIIFMDEI 243
Query: 241 DAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRP 300
DAI +R S +S + + +R L LL ++DG + + ++ ATNRP+ +D ALLRP
Sbjct: 244 DAIGGRRF--SEGTSADREI-QRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRP 300
Query: 301 GRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEA 360
GR D + +P P+ + R E+L+IH + ++D V + E F GADL + +EA
Sbjct: 301 GRLDRKIEIPLPNEQSRMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV--CTEA 358
Query: 361 ALRSLRPSLTQSVVDEYSNA 380
+ ++R + +++ A
Sbjct: 359 GMAAIRAERDYVIHEDFMKA 378
>Os02g0199900 Similar to 26S proteasome regulatory complex subunit p42D
Length = 400
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 136/261 (52%), Gaps = 6/261 (2%)
Query: 122 NSVTRGVIKEIPA-VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGP 180
+ V ++ E P VS+ +GGL ++L++++E P+ + F R+GI P +GVLL+GP
Sbjct: 123 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 182
Query: 181 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEA 240
PG + + KY+GE L+R F AR P IIF DE
Sbjct: 183 PGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 242
Query: 241 DAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRP 300
DAI +R S +S + + +R L LL ++DG + + ++ ATNRP+ +D ALLRP
Sbjct: 243 DAIGGRRF--SEGTSADREI-QRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRP 299
Query: 301 GRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEA 360
GR D + +P P+ + R E+L+IH + ++D V + E F GADL + +EA
Sbjct: 300 GRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNV--CTEA 357
Query: 361 ALRSLRPSLTQSVVDEYSNAA 381
+ ++R V +++ A
Sbjct: 358 GMAAIRAERDYVVHEDFMKAV 378
>Os01g0842600 Similar to AAA-metalloprotease FtsH
Length = 802
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 134/265 (50%), Gaps = 7/265 (2%)
Query: 118 SVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLL 177
S+ K VT+ V + D+ G K+++ + V + +K+ ++ LG +G LL
Sbjct: 300 SIGKVQVTKLDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALL 358
Query: 178 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFF 237
GPPG G++ +VG G + +R FQ AR SPSI+F
Sbjct: 359 VGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCSPSIVFI 418
Query: 238 DEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAAL 297
DE DAI R G SG E L+ LL EMDG +G++VLA TNRP+ +D AL
Sbjct: 419 DEIDAIG--RARGRGGFSGGHDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKAL 476
Query: 298 LRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLW--KVAERTELFTGADLEGLE 355
LRPGRFD + + PD +GR +I RI+ +K+ L + + ++A T F GAD+ +
Sbjct: 477 LRPGRFDRQISIDKPDIKGRDQIFRIYLKKLKLDKEPSFYSQRLAALTPGFAGADIANV- 535
Query: 356 GKSEAALRSLRPSLTQSVVDEYSNA 380
+EAAL + R T + + +A
Sbjct: 536 -CNEAALIAARSEGTLITMQHFESA 559
>Os01g0574500 Peptidase M41, FtsH domain containing protein
Length = 715
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 112/218 (51%), Gaps = 7/218 (3%)
Query: 137 WDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXXXX 196
+ D+ G+ K +L++ V + ++ F RLG +GVLL GPPG
Sbjct: 229 FSDVKGVDEAKAELEEIVHY-LRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEA 287
Query: 197 XXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNSSG 256
G+E +VG G +R F A+ SP IIF DE DAI R P
Sbjct: 288 GVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAIGGSRN-PKDQQYM 346
Query: 257 NATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEG 316
T L+ LL E+DG + GIIV+AATN P ++D AL+RPGRFD + VP PD EG
Sbjct: 347 KMT-----LNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEG 401
Query: 317 RYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGL 354
R +IL H K+ DDVDL +A T F+GADL L
Sbjct: 402 RRQILESHMSKVLKSDDVDLMIIARGTPGFSGADLANL 439
>AK110513
Length = 885
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 132/254 (51%), Gaps = 7/254 (2%)
Query: 119 VAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLH 178
+AK +VT V+++D+ G K+++ + V++ +K + LG +G LL
Sbjct: 353 MAKANVTSVDKNAKDKVTFNDVAGCDEAKQEIMEFVDF-LKKPEKYKELGAKIPKGALLV 411
Query: 179 GPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFD 238
GPPG G++ +VG G A +R F AR +PSIIF D
Sbjct: 412 GPPGTGKTLLAKATAGEAGVPFLSISGSDFMEMFVGVGPARVRDLFSQARSQAPSIIFID 471
Query: 239 EADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALL 298
E DAI R G +G E L+ LL EMDG +G++VLA TNRP+ +D AL+
Sbjct: 472 EIDAIGRARG--RGAMAGGHDERENTLNQLLVEMDGFNTTSGVVVLAGTNRPDILDKALM 529
Query: 299 RPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLW--KVAERTELFTGADLEGLEG 356
RPGRFD + V PD +GR +I R+H K+ L ++ + ++A T F+GAD+ +
Sbjct: 530 RPGRFDRTISVDTPDIKGREQIFRVHLAKLRLEKALEHYSERLAALTPGFSGADIANV-- 587
Query: 357 KSEAALRSLRPSLT 370
+EAAL + R S T
Sbjct: 588 CNEAALVAARASDT 601
>Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.24.-)
Length = 709
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 111/218 (50%), Gaps = 7/218 (3%)
Query: 137 WDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXXXX 196
+ D+ G+ K +L++ V + ++ F LG +GVLL GPPG
Sbjct: 222 FSDVKGVDEAKAELEEIVHY-LRDPKRFTHLGGKLPKGVLLVGPPGTGKTMLARAVAGEA 280
Query: 197 XXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNSSG 256
G+E +VG G +R F A+ SP IIF DE DAI R P
Sbjct: 281 GVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAIGGSRN-PKDQQYM 339
Query: 257 NATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEG 316
T L+ LL E+DG + GIIV+AATN P ++D AL+RPGRFD + VP PD EG
Sbjct: 340 RMT-----LNQLLVELDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEG 394
Query: 317 RYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGL 354
R +IL H K+ DDVDL +A T F+GADL L
Sbjct: 395 RRQILESHMLKVLKSDDVDLMIIARGTPGFSGADLANL 432
>Os09g0560200 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7).
Splice isoform 2
Length = 448
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 139/263 (52%), Gaps = 7/263 (2%)
Query: 118 SVAKNSVTRGVIKEI--PAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGV 175
VA S R ++ + P V++DDIGG +A K+++++AVE P+ H F G+ P RGV
Sbjct: 168 DVAACSAARFLVADADKPGVAYDDIGGCEAQKREVREAVELPLTHPELFAAAGVDPPRGV 227
Query: 176 LLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSII 235
LLHGP G AEL +G ++R F++AR +P+I+
Sbjct: 228 LLHGPLGTGKTMLAKAVARETSAAFFRVNAAELARH---DGPRVVRDLFRLARDMAPAIV 284
Query: 236 FFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDA 295
F DE DAIA R G + G +R+L LLT+MDG + +T + V+ ATNR + +D
Sbjct: 285 FIDEVDAIAAARQGGDDDDGGARRHVQRVLIELLTQMDGFDESTNVRVIMATNRADDLDP 344
Query: 296 ALLRPGRFD-MVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGL 354
ALLRPGR D V + P E + +L+ T M L DVDL +A R + + A++ +
Sbjct: 345 ALLRPGRLDRKVEFTAPESPEEKRLVLQTCTAGMSLDGDVDLDALAARRDKLSAAEIAAV 404
Query: 355 EGKS-EAALRSLRPSLTQSVVDE 376
K+ A+R R ++T D+
Sbjct: 405 CRKAGMQAVRDRRGAVTADDFDK 427
>Os02g0784700 Similar to 26S protease regulatory subunit 7 (26S proteasome
subunit 7) (26S proteasome AAA-ATPase subunit RPT1)
(Regulatory particle triple-A ATPase subunit 1)
Length = 235
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 113/223 (50%), Gaps = 4/223 (1%)
Query: 163 SFDRLGISPIRGVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRR 222
F +LGI P +GVL +GPPG G+EL KYVGEG ++R
Sbjct: 2 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 61
Query: 223 TFQMARLASPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGII 282
FQMAR I+FFDE DAI R + G +R + ++ ++DG + I
Sbjct: 62 LFQMARSKKACIVFFDEVDAIGGAR---FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIK 118
Query: 283 VLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAER 342
VL ATNRP+ +D ALLRPGR D + PD EGR +I +IHTR M D+ +A
Sbjct: 119 VLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARL 178
Query: 343 TELFTGADLEGLEGKSEA-ALRSLRPSLTQSVVDEYSNAAIHG 384
TGAD+ + ++ A+R+ R ++T+ + N I G
Sbjct: 179 CPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKG 221
>Os01g0683100 Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3)
(Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
(Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
(AtAAA1)
Length = 519
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 131/263 (49%), Gaps = 20/263 (7%)
Query: 126 RGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGIS-PIRGVLLHGPPGCX 184
R V+ P V WDD+ GL K+ L++AV P+ F GI P +GVL+ GPPG
Sbjct: 223 RDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTG 280
Query: 185 XXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIA 244
A L SK+ GE E ++R F +AR +PS IF DE D++
Sbjct: 281 KTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARFYAPSTIFIDEIDSLC 340
Query: 245 PKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATG--------IIVLAATNRPNAIDAA 296
R +SG R+ S LL ++DG+ ++ ++VLAATN P ID A
Sbjct: 341 TSR-----GASGEHESSRRVKSELLVQIDGVNNSSTTEDGQPKIVMVLAATNFPWDIDEA 395
Query: 297 LLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEG 356
L R R + +Y+P P+ E R ++ I+ + + + DVD+ +VA RTE ++G DL +
Sbjct: 396 LRR--RLEKRIYIPLPNFESRKALININLKTVEVATDVDIDEVARRTEGYSGDDLTNV-- 451
Query: 357 KSEAALRSLRPSLTQSVVDEYSN 379
+A++ +R + DE N
Sbjct: 452 CRDASMNGMRRKIAGKTRDEIKN 474
>Os01g0141300
Length = 448
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 10/240 (4%)
Query: 114 ESAKSVAKNSVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIR 173
+S ++ + + ++ P+V W D+ GL++ K+ LQ+A PIK F SP +
Sbjct: 85 DSEQAKPRGMLRSAIVAAKPSVKWSDVAGLESAKEALQEAAILPIKFPHFFTG-KRSPWK 143
Query: 174 GVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPS 233
LL+GPPG ++L SK++GE E L+ FQMAR +PS
Sbjct: 144 AFLLYGPPGTGKSYLAEAVATEVDSTFFSISSSDLVSKWMGESEKLVANLFQMARENAPS 203
Query: 234 IIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATG-IIVLAATNRPNA 292
IIF DE D++ +R + N + R+ + LL +M G + + ++VLAATN P+
Sbjct: 204 IIFIDEIDSLCGQRGECNENEA-----SRRIKTELLVQMQGFDNSNDKVLVLAATNMPHV 258
Query: 293 IDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLG-DDVDLWKVAERTELFTGADL 351
+D A+ R RFD +Y+P PD + R + +IH P + D +A +TE F+G+D+
Sbjct: 259 LDQAMRR--RFDKCIYIPLPDLKARKDTFKIHIGDTPHSLTEGDFVSLAYQTEGFSGSDI 316
>AK110158
Length = 856
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 9/234 (3%)
Query: 137 WDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXXXX 196
+ ++ G+ K+++ + V + +K+ +++LG RG +L GPPG
Sbjct: 367 FKNVAGMDEAKEEIMEFVNF-LKNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 425
Query: 197 XXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNSSG 256
G+E +VG G + +R F A+ +P IIF DE DAI R G GN G
Sbjct: 426 KAPFLSVSGSEFVEMFVGVGPSRVRDMFANAKKHAPCIIFIDEIDAIGKSR-GKGGNFGG 484
Query: 257 NATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEG 316
N E L+ LL +MDG ++VLA TNRP+ +DAAL+RPGRFD + + PD G
Sbjct: 485 NDER-ESTLNELLVQMDGFGTEEHVVVLAGTNRPDVLDAALMRPGRFDRHIAIDRPDISG 543
Query: 317 RYEILRIHTRKMPLGDDVDLWKVAER----TELFTGADLEGLEGKSEAALRSLR 366
R +I +H + + L D +AE+ T F+GAD+ + +EAAL + R
Sbjct: 544 RKDIFLVHLKPLTLHSSTDRDLLAEKLSTLTPGFSGADVANV--CNEAALIAAR 595
>Os01g0757400 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 386
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 133/249 (53%), Gaps = 18/249 (7%)
Query: 123 SVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPG 182
++ R +I+ P V W+ I GL+ K+ L++AV PIK+ F L +SP +G+LL GPPG
Sbjct: 87 TLLRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPG 145
Query: 183 CXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADA 242
+ + SK+ G+ E L++ F++AR +PS IF DE DA
Sbjct: 146 TGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDA 205
Query: 243 IAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGII-VLAATNRPNAIDAALLRPG 301
I +R G + RL + LL +MDGL ++ VLAATN P +DAA+LR
Sbjct: 206 IISQR----GEARSEHEASRRLKTELLIQMDGLTKTNDLVFVLAATNLPWELDAAMLR-- 259
Query: 302 RFDMVLYVPPPDAEGRY----EILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGK 357
R + + VP P+AE R+ E+L T K+ + D + E+TE ++G+D+ +
Sbjct: 260 RLEKRILVPLPEAEARHAMFEELLPSTTSKLEVPYDT----LVEKTEGYSGSDIRLV--C 313
Query: 358 SEAALRSLR 366
EAA++ LR
Sbjct: 314 KEAAMQPLR 322
>Os06g0229066 Twin-arginine translocation pathway signal domain containing
protein
Length = 486
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 133/255 (52%), Gaps = 10/255 (3%)
Query: 134 AVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXX 193
V++DD+ G+ K+ Q+ V++ +K F +G +GVLL GPPG
Sbjct: 212 GVTFDDVAGVDEAKQDFQEIVQF-LKFPEKFTAVGARTPKGVLLVGPPGTGKTLLAKAIA 270
Query: 194 XXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGN 253
G+E +VG G + +R F A+ ++P ++F DE DA+ +R +G
Sbjct: 271 GEAGVPFFSLSGSEFIEMFVGVGASRVRDLFDRAKASAPCLVFIDEIDAVGRQRG--AGI 328
Query: 254 SSGNATVGERLLSTLLTEMDGLELATGIIV-LAATNRPNAIDAALLRPGRFDMVLYVPPP 312
GN E+ L+ LLTEMDG G +V +AATNRP +DAALLRPGRFD + V P
Sbjct: 329 GGGNDER-EQTLNQLLTEMDGFGGGDGGVVVIAATNRPEILDAALLRPGRFDRRVSVGLP 387
Query: 313 DAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAAL---RSLRPSL 369
D GR EIL +H L V L VA RT F+GADL L +EAA+ R + +
Sbjct: 388 DVRGREEILLVHGANKRLDPGVSLAVVAMRTPGFSGADLANL--MNEAAILAGRRGKDRI 445
Query: 370 TQSVVDEYSNAAIHG 384
T S +D+ + + G
Sbjct: 446 TVSEIDDSIDRIVAG 460
>Os01g0673500 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 370
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 129/245 (52%), Gaps = 10/245 (4%)
Query: 123 SVTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPG 182
++ R +I+ P V W+ I GL+ K+ L++AV PIK+ F L +SP +G+LL GPPG
Sbjct: 75 TLLRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFKGL-LSPWKGILLFGPPG 133
Query: 183 CXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADA 242
+ + SK+ G+ E L++ F++AR +PS IF DE DA
Sbjct: 134 TGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDA 193
Query: 243 IAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGII-VLAATNRPNAIDAALLRPG 301
I +R G + RL + LL +MDGL ++ VLAATN P +DAA+LR
Sbjct: 194 IISQR----GEARSEHEASRRLKTELLIQMDGLTKTDDLVFVLAATNLPWELDAAMLR-- 247
Query: 302 RFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAA 361
R + + VP P+ E R+ + +P ++ + E+TE ++G+D+ + EAA
Sbjct: 248 RLEKRILVPLPEQEARHAMFEELLPSVPGTMNIPYDVLVEKTEGYSGSDIRLV--CKEAA 305
Query: 362 LRSLR 366
++ LR
Sbjct: 306 MQPLR 310
>Os05g0519400 Similar to N-ethylmaleimide sensitive factor NSF (Fragment)
Length = 743
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 120/229 (52%), Gaps = 18/229 (7%)
Query: 140 IGGLKA-VKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXXXXXXXXXXXXX 198
IGGL A ++A + ++LGI ++G+LL+GPPG
Sbjct: 220 IGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNG 279
Query: 199 XX-XXXXGAELYSKYVGEGEALLRRTFQMARLASPS--------IIFFDEADAIAPKRTG 249
G E+ SK+VGE E +R F A + +I FDE DAI R
Sbjct: 280 NEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSR-- 337
Query: 250 PSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYV 309
G++ V + +++ LLT++DG+E ++++ TNR + +D ALLRPGR ++ + +
Sbjct: 338 --GSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEI 395
Query: 310 PPPDAEGRYEILRIHTRKMP----LGDDVDLWKVAERTELFTGADLEGL 354
PD GR +IL+IHT KM L +V+L ++A RT+ ++GA+LEG+
Sbjct: 396 NLPDENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGV 444
>Os03g0344700 AAA ATPase domain containing protein
Length = 666
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 114/224 (50%), Gaps = 10/224 (4%)
Query: 134 AVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGI-SPIRGVLLHGPPGCXXXXXXXXX 192
V+++DIG L++VK+ L++ V P++ F R + P +G+LL GPPG
Sbjct: 360 GVTFEDIGALESVKETLKELVMLPLQRPELFSRGQLMKPCKGILLFGPPGTGKTMLAKAV 419
Query: 193 XXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSG 252
+ + SK+ GEGE ++ F +A +PS+IF DE D + +R P
Sbjct: 420 ATEAGANFINISMSSISSKWFGEGEKFVKAVFSLASKIAPSVIFVDEVDGMLGRRENP-- 477
Query: 253 NSSGNATVGERLLSTLLTEMDGLELATG--IIVLAATNRPNAIDAALLRPGRFDMVLYVP 310
G ++ + + DGL ++VLAATNRP +D A++R R L V
Sbjct: 478 ---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVN 532
Query: 311 PPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGL 354
PDA R +IL + K L DDVDL VA TE ++G+DL+ L
Sbjct: 533 LPDASNRRKILSVILAKEDLADDVDLEAVASLTEGYSGSDLKNL 576
>Os07g0672500 SMAD/FHA domain containing protein
Length = 1081
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 10/224 (4%)
Query: 134 AVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGI-SPIRGVLLHGPPGCXXXXXXXXX 192
V+++DIG L+ VK+ L++ V P++ F + + P +G+LL GPPG
Sbjct: 775 GVTFEDIGALENVKETLKELVMLPLQRPELFSKGQLMKPCKGILLFGPPGTGKTMLAKAV 834
Query: 193 XXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSG 252
+ + SK+ GEGE ++ F +A +PS+IF DE D + +R P
Sbjct: 835 ATEAGANFINISMSSIASKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDGMLGRRENP-- 892
Query: 253 NSSGNATVGERLLSTLLTEMDGLELATG--IIVLAATNRPNAIDAALLRPGRFDMVLYVP 310
G ++ + + DGL ++VLAATNRP +D A++R R L V
Sbjct: 893 ---GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVN 947
Query: 311 PPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGL 354
PDA R +IL + K L DDVDL +A T+ ++G+D++ L
Sbjct: 948 LPDASNRKKILSVILAKEDLADDVDLEALANLTDGYSGSDMKNL 991
>Os05g0584600 AAA ATPase domain containing protein
Length = 855
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 132 IPA----VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXX 187
IPA V++DDIG L +K+ LQ+ V P++ F + P RG+LL GPPG
Sbjct: 491 IPASEIGVTFDDIGALADIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTM 550
Query: 188 XXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKR 247
+ + SK+ GE E +R F +A +P+IIF DE D++ +R
Sbjct: 551 LAKAIANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR 610
Query: 248 TGPSGNSSGNATVGERLLSTLLTEMDGLELATG--IIVLAATNRPNAIDAALLRPGRFDM 305
G ++ + ++ DGL +G I+VLAATNRP +D A++R RF+
Sbjct: 611 A-----RCGEHEAMRKIKNEFMSHWDGLLSKSGERILVLAATNRPFDLDEAIIR--RFER 663
Query: 306 VLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGL 354
+ V P + R ILR K + +D+D ++A TE ++G+DL+ L
Sbjct: 664 RIMVGLPTLDSRELILRTLLSKEKVAEDIDYKELATMTEGYSGSDLKNL 712
>Os06g0130000 Similar to Tobacco mosaic virus helicase domain-binding protein
(Fragment)
Length = 487
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 121/259 (46%), Gaps = 14/259 (5%)
Query: 124 VTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGC 183
+ ++ PAV W+D+ GL K+ L + V P K F L P RG+LL GPPG
Sbjct: 201 INTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGN 259
Query: 184 XXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAI 243
+ L SK+VGE E L+R F +A PS+IF DE D++
Sbjct: 260 GKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSV 319
Query: 244 APKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATG--IIVLAATNRPNAIDAALLRPG 301
R ++S RL S L + DG+ +IV+ ATN+P +D A+LR
Sbjct: 320 MSARLANENDAS------RRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR-- 371
Query: 302 RFDMVLYVPPPDAEGRYEILRIHTRKMPLG-DDVDLWKVAERTELFTGADLEGLEGKSEA 360
R +YVP PD R +L+ + DL ++A TE ++G+DL L EA
Sbjct: 372 RLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRAL--CEEA 429
Query: 361 ALRSLRPSLTQSVVDEYSN 379
A+ +R Q+++ +N
Sbjct: 430 AMMPIRELGPQNILTIKAN 448
>Os01g0226400 AAA ATPase domain containing protein
Length = 840
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 120/241 (49%), Gaps = 15/241 (6%)
Query: 132 IPA----VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXX 187
IPA V++DDIG L +K+ LQ+ V P++ F + P RG+LL GPPG
Sbjct: 522 IPANEIGVTFDDIGALSDIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTM 581
Query: 188 XXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKR 247
+ + SK+ GE E +R F +A SP+IIF DE D++ +R
Sbjct: 582 LAKAIANEAQASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQR 641
Query: 248 TGPSGNSSGNATVGERLLSTLLTEMDGL--ELATGIIVLAATNRPNAIDAALLRPGRFDM 305
N +G ++ + +T DGL I+VLAATNRP +D A++R RF+
Sbjct: 642 -----NRAGEHEAMRKIKNEFMTHWDGLLSRPDQKILVLAATNRPFDLDEAIIR--RFER 694
Query: 306 VLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAALRSL 365
+ V P E R ILR K + +D ++A TE ++G+DL+ L + AA R +
Sbjct: 695 RIMVGLPSLESRELILRSLLSKEKVDGGLDYKELATMTEGYSGSDLKNL--CTTAAYRPV 752
Query: 366 R 366
R
Sbjct: 753 R 753
>Os01g0623500 AAA ATPase domain containing protein
Length = 812
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 115/229 (50%), Gaps = 14/229 (6%)
Query: 132 IPA----VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCXXXX 187
IPA V++DDIG L +K+ L + V P++ F + P +GVLL GPPG
Sbjct: 459 IPANEIGVTFDDIGALADIKECLHELVMLPLQRPDFFKGGLLKPCKGVLLFGPPGTGKTM 518
Query: 188 XXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKR 247
A + SK+ GE E ++ F +A +P+IIF DE D++ KR
Sbjct: 519 LAKALANAAGASFLNISMASMTSKWYGESEKCIQALFSLAAKLAPAIIFIDEVDSMLGKR 578
Query: 248 TGPSGNSSGNATVGERLLSTLLTEMDGLELATG--IIVLAATNRPNAIDAALLRPGRFDM 305
S N + R+ + + DGL + I+VLAATNRP +D A++R RF+
Sbjct: 579 DNHSENEA-----SRRVKNEFMAHWDGLLSKSNERILVLAATNRPFDLDDAVIR--RFEH 631
Query: 306 VLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGL 354
+ V P E R IL+ K + +++D ++A+ TE +T +DL+ +
Sbjct: 632 RIMVGLPTLESRELILKTLLSKETV-ENIDFKELAKMTEGYTSSDLKNI 679
>Os06g0714500 AAA ATPase domain containing protein
Length = 393
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 15/236 (6%)
Query: 135 VSWDDIGGLKAVKKKLQQAVEWPIKHAA--SFDRLGISPIRGVLLHGPPGCXXXXXXXXX 192
V +D IGGL VK+ L + V P++ +F +L +SP +GVLL+GPPG
Sbjct: 81 VEFDSIGGLDHVKQALYELVILPLRRPELFTFGKL-LSPQKGVLLYGPPGTGKTMLAKAI 139
Query: 193 XXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSG 252
+ L SK+ G+ + L+ F +A P+IIF DE D+ +R
Sbjct: 140 AKESGAVFINVRISNLMSKWFGDAQKLVSAVFSLAHKLQPAIIFIDEVDSFLGQRRTTDH 199
Query: 253 NSSGNATVGERLLSTLLTEMDGLELATG--IIVLAATNRPNAIDAALLRPGRFDMVLYVP 310
+ N + + ++ DG ++VLAATNRP+ +D A+LR RF + +
Sbjct: 200 EAMTN------MKTEFMSLWDGFTTDQNARVMVLAATNRPSELDEAILR--RFTQIFEIG 251
Query: 311 PPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSEAALRSLR 366
P R +ILR+ + + +++ +A E FTG+D+ LE +AA +R
Sbjct: 252 IPVQSERSKILRVVLKGENVEPNINYDYIAGLCEGFTGSDI--LELCKQAAFYPIR 305
>Os10g0442600 Similar to Cell division control protein 48 homolog A (AtCDC48a)
Length = 203
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 264 LLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRI 323
+L+ LLTEMDG+ + ++ ATNRP+ ID ALLRPGR D ++Y+P PD + R +I +
Sbjct: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
Query: 324 HTRKMPLGDDVDLWKVAERTELFTGADL 351
RK P+ DVDL +A+ T+ F+GAD+
Sbjct: 61 CLRKSPVAKDVDLNALAKYTQGFSGADI 88
>Os06g0225900 AAA ATPase domain containing protein
Length = 271
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 169 ISPIRGVLLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMAR 228
+ P +G+LL GPPG G+ L SK+ G+ E L + F A
Sbjct: 13 LRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSNLTSKWFGDAEKLTKALFSFAS 72
Query: 229 LASPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATG--IIVLAA 286
+P IIF DE D++ R G + + R+ + + DGL I++L A
Sbjct: 73 RLAPVIIFVDEVDSLLGARGGAFEHEA-----TRRMRNEFMAAWDGLRSKENQRILILGA 127
Query: 287 TNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELF 346
TNRP +D A++R R +YV PD++ R +IL+I K L D ++A TE +
Sbjct: 128 TNRPFDLDDAVIR--RLPRRIYVDLPDSQNRMKILKILLAKENLESDFRFDELANATEGY 185
Query: 347 TGADLEGL 354
+G+DL+ L
Sbjct: 186 SGSDLKNL 193
>Os02g0740300 AAA ATPase domain containing protein
Length = 611
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 135 VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLG--------ISPIRGVLLHGPPGCXXX 186
V W++I G + K++++ + ++ +D + + R VL GPPG
Sbjct: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
Query: 187 XXXXXXXXXXXXXXXXXXGAELYSKYVGEGEALLRRTFQMAR-LASPSIIFFDEADAIAP 245
+ SKY GE E LL F +A L IIF DE D+ A
Sbjct: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
Query: 246 KRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDM 305
R ++ R+LS +L ++DG E ++V+AATNR +D AL+ RFD
Sbjct: 454 ARDSEMHEAT------RRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDS 505
Query: 306 VLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSE 359
++ PD + R EI + + + +L++ + TE +G D+ + ++E
Sbjct: 506 IICFDLPDQQTRAEISAQYAKHL---TKSELFQFSLATEEMSGRDIRDICQQAE 556
>Os11g0661400 AAA ATPase, central region domain containing protein
Length = 241
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 206 AELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNSSGNATVGERLL 265
+ + SK+ GEGE ++ F +A +PS+IF DE D++ +R P G ++
Sbjct: 8 SSITSKWFGEGEKYVKAVFSLASKIAPSVIFIDEVDSMLGRRENP-----GEHEAMRKMK 62
Query: 266 STLLTEMDGLELATG--IIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRI 323
+ + DGL ++VL ATNRP +D A++R RF L V PDA R +IL++
Sbjct: 63 NEFMVNWDGLRTKDKERVLVLGATNRPFDLDEAVIR--RFPRRLMVNLPDASNREKILKV 120
Query: 324 HTRKMPLGDDVDLWKVAERTELFTGADLEGL 354
K L +D+ +A T+ ++G+DL+ L
Sbjct: 121 ILAKEELAPGIDMDSLATMTDGYSGSDLKNL 151
>Os04g0466100 Similar to Cell division protein FtsH-like protein
Length = 174
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 262 ERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEIL 321
++ L+ LLTEMDG + +IV+AATNRP A+D AL RPGRF + V PD EGR IL
Sbjct: 4 DQTLNQLLTEMDGFDSDMKVIVMAATNRPKALDPALCRPGRFSRKVLVGVPDLEGRRNIL 63
Query: 322 RIHTRKMPLGDDVDLWK--VAERTELFTGADLEGLEGKSEAALRSLR 366
+H R +PL +D ++ VA T GADL + +EAAL + R
Sbjct: 64 AVHLRDVPLEEDPEIICDLVASLTPGLVGADLANI--VNEAALLAAR 108
>Os01g0618800 AAA ATPase, central region domain containing protein
Length = 304
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 284 LAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERT 343
+AATN P+ +D AL RPGRFD + VP PD GR EIL ++ + P+ DVD+ +A T
Sbjct: 1 MAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPVSSDVDVNAIARST 60
Query: 344 ELFTGADLEGL 354
F GADL L
Sbjct: 61 PGFNGADLANL 71
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,477,927
Number of extensions: 481188
Number of successful extensions: 1543
Number of sequences better than 1.0e-10: 52
Number of HSP's gapped: 1408
Number of HSP's successfully gapped: 63
Length of query: 391
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 288
Effective length of database: 11,657,759
Effective search space: 3357434592
Effective search space used: 3357434592
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)