BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0501700 Os12g0501700|AY250075
(233 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0501700 Transcription factor, MADS-box domain containi... 447 e-126
Os07g0605200 MADS box transcription factor 18 (OsMADS18) (M... 167 5e-42
Os09g0507200 MADS box protein 147 5e-36
Os03g0215400 Box protein (MADS box protein MADS1) 145 3e-35
Os06g0162800 MADS box protein 144 4e-35
Os03g0752800 MADS14 protein 144 6e-35
Os07g0108900 MADS15 protein 143 9e-35
AK069331 143 1e-34
Os02g0682200 Similar to MADS box protein 138 4e-33
AF109153 135 3e-32
Os04g0580700 MADS box transcription factor MADS17 135 3e-32
Os03g0753100 Transcription factor, MADS-box domain containi... 134 5e-32
Os08g0531700 Similar to Developmental protein SEPALLATA2 (A... 126 1e-29
Os02g0731200 Transcription factor MADS57 126 1e-29
Os01g0886200 Similar to AGAMOUS homolog 125 3e-29
Os03g0122600 Transcription factor, MADS-box domain containi... 124 5e-29
Os04g0304400 Similar to MADS-box protein AGL16-II 124 7e-29
Os08g0431900 Transcription factor MADS23 122 3e-28
Os02g0579600 Transcription factor MADS27 121 5e-28
Os02g0170300 Similar to MADS box protein ZMM17 120 1e-27
Os12g0207000 Transcription factor 119 2e-27
Os05g0203800 Similar to MADS box protein 115 2e-26
AF141965 115 3e-26
Os10g0536100 Transcription factor MADS56 114 6e-26
Os02g0761000 Similar to Transcription factor MADS55 113 1e-25
Os04g0614100 Transcription factor, MADS-box domain containi... 111 5e-25
Os06g0667200 MADS30 110 6e-25
Os01g0883100 Similar to PISTILLATA-like MADS box protein 109 1e-24
Os06g0712700 MADS-box protein SPW1 108 2e-24
Os03g0186600 Transcription factor, MADS-box domain containi... 103 1e-22
Os08g0112700 Similar to TAGL12 transcription factor 100 1e-21
Os05g0423400 Similar to PISTILLATA-like MADS box protein 99 3e-21
Os12g0206800 Transcription factor, MADS-box domain containi... 97 1e-20
Os06g0217300 Similar to Transcription factor MADS55 95 5e-20
Os01g0201700 Similar to MADS box protein 93 1e-19
Os04g0461300 Transcription factor, MADS-box domain containi... 93 2e-19
Os01g0922800 Similar to MADS-box protein PTM5 87 1e-17
Os01g0726400 Transcription factor, MADS-box domain containi... 85 5e-17
Os06g0223300 Similar to TDR8 protein 85 5e-17
Os08g0494100 82 3e-16
Os01g0975800 80 2e-15
Os09g0116800 79 2e-15
Os06g0108100 79 3e-15
Os06g0347700 78 5e-15
Os06g0503500 75 5e-14
Os02g0104100 74 8e-14
Os08g0531900 Similar to MADS box transcription factor-like ... 72 4e-13
Os12g0407000 69 2e-12
Os11g0658700 Transcription factor, MADS-box domain containi... 67 8e-12
Os05g0203600 Transcription factor, MADS-box domain containi... 64 1e-10
>Os12g0501700 Transcription factor, MADS-box domain containing protein
Length = 233
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/233 (93%), Positives = 218/233 (93%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL
Sbjct: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELETLHTCIRASXXXXXX 180
DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELETLHTCIRAS
Sbjct: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELETLHTCIRASPTKAAA 180
Query: 181 XXXXXXXXXFVPNLNICCGDSGEPETVTAPLGWTSSNNGLPWWMLQSSSNGKS 233
FVPNLNICCGDSGEPETVTAPLGWTSSNNGLPWWMLQSSSNGKS
Sbjct: 181 PPACNTADAFVPNLNICCGDSGEPETVTAPLGWTSSNNGLPWWMLQSSSNGKS 233
>Os07g0605200 MADS box transcription factor 18 (OsMADS18) (MADS box protein 2)
(MADS box protein 28) (FDRMADS7)
Length = 249
Score = 167 bits (423), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 152/252 (60%), Gaps = 29/252 (11%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRG VQ+RRIEN+++RQVTFSKRR GLLKKAHEI+VLCD DVA IVFS KG L+ + SS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEF-SS 59
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
H++ME ILE+Y R+ + V+E E + + ++ L+ +++AL+KSQR L+G++L
Sbjct: 60 HSSMEGILERYQRYSF--DERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQL 117
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLME--------------KNTILEKKI-TELE 165
D+LT++++QQLE+Q++ SL +IRS+K +LL E +N +L+K + TE E
Sbjct: 118 DTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKE 177
Query: 166 TLHTCIRASXXXXXXXXXXXXXXXFV------PNLNICCGD---SGEPETVTAPLGWTSS 216
+ I + V P N SGE E +P +
Sbjct: 178 KNNAIINTNREEQNGATPSTSSPTPVTAPDPIPTTNNSQSQPRGSGESEAQPSPA--QAG 235
Query: 217 NNGLPWWMLQSS 228
N+ LP WML++S
Sbjct: 236 NSKLPPWMLRTS 247
>Os09g0507200 MADS box protein
Length = 248
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 15/182 (8%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRG+V+++RIEN+++RQVTF+KRR GLLKKA+E++VLCD +VA I+FS +G L+ + S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
+M R LE+Y + + + EL S +++KL+ R+E L+++QRNL+G++L
Sbjct: 61 Q-SMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDL 119
Query: 121 DSLTLQDIQQLENQIDTSLNNIRS--------------RKEKLLMEKNTILEKKITELET 166
+L +++++QLE Q+D+SL +IRS R+E++L E N L +K+ E
Sbjct: 120 GTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQ 179
Query: 167 LH 168
LH
Sbjct: 180 LH 181
>Os03g0215400 Box protein (MADS box protein MADS1)
Length = 257
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 125/173 (72%), Gaps = 8/173 (4%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGKV+++RIEN++SRQVTF+KRR GLLKKA+E+++LCD +VA I+FS +G LF ++SS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSY-DHIKLRGRIEALKKSQRNLMGQE 119
+ M + LE+Y N ++ E ++Y +++KL+ R+E L+ +QRN++G++
Sbjct: 61 -SCMYKTLERY------RSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGED 113
Query: 120 LDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELETLHTCIR 172
L L++++++QLENQI+ SL IRSRK + L+++ L+ K +L+ L+ +R
Sbjct: 114 LGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLR 166
>Os06g0162800 MADS box protein
Length = 225
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 122/167 (73%), Gaps = 6/167 (3%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGKV+++RIEN++SRQVTF+KRR GLLKKA+E++VLCD +VA I+FS +G LF +++S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMS--YDHIKLRGRIEALKKSQRNLMGQ 118
+ M + LE+Y + N E LE +S +++KL+ R+E L+ +QRNL+G+
Sbjct: 61 -SCMYKTLERYRS---CNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGE 116
Query: 119 ELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELE 165
+L L+L++++QLENQI+ SL NIRS K + L+++ L++K +L+
Sbjct: 117 DLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQ 163
>Os03g0752800 MADS14 protein
Length = 246
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 126/165 (76%), Gaps = 3/165 (1%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGKVQ++RIEN+++RQVTFSKRR GLLKKA+EI+VLCD +VA I+FS KG L+ YA+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
+ M++ILE+Y+R+ + +I + +G+ +++ KL+ ++E ++K Q++LMG++L
Sbjct: 61 -SCMDKILERYERYSYAEKV--LISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDL 117
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELE 165
+SL L+++QQLE Q++ SL +IRSRK +L++E L++K L+
Sbjct: 118 ESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQ 162
>Os07g0108900 MADS15 protein
Length = 267
Score = 143 bits (361), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 126/165 (76%), Gaps = 3/165 (1%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGKVQ++RIEN+++RQVTFSKRR GLLKKAHEI+VLCD +VAAIVFS KG L+ YA+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
+ M++ILE+Y+R+ + +I E EG+ +++ KL+ +IE ++K ++LMG++L
Sbjct: 61 -SRMDKILERYERYSYAEKA--LISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDL 117
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELE 165
+SL L+++QQLE Q+++SL +I SRK L++E + L+KK L+
Sbjct: 118 ESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQ 162
>AK069331
Length = 284
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 126/165 (76%), Gaps = 3/165 (1%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGKVQ++RIEN+++RQVTFSKRR GLLKKA+EI+VLCD +VA I+FS KG L+ YA+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
+ M++ILE+Y+R+ + +I + +G+ +++ KL+ ++E ++K Q++LMG++L
Sbjct: 61 -SCMDKILERYERYSYAEK--VLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDL 117
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELE 165
+SL L+++QQLE Q++ SL +IRSRK +L++E L++K L+
Sbjct: 118 ESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQ 162
>Os02g0682200 Similar to MADS box protein
Length = 250
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 116/165 (70%), Gaps = 7/165 (4%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRG+V+++RIEN+++RQVTFSKRR GLLKKA+E++VLCD +VA I+FS++G L+ + S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 HTTMERILEKYDRHEL-LSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQE 119
T + LE+Y + NN + E MS KL+ + EAL+++QR+L+G++
Sbjct: 61 GIT--KTLERYQHCCYNAQDSNNALSETQSWYHEMS----KLKAKFEALQRTQRHLLGED 114
Query: 120 LDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITEL 164
L L+++++QQLE Q++ +L+ R RK +L+ME+ L +K +L
Sbjct: 115 LGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQL 159
>AF109153
Length = 249
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 121/168 (72%), Gaps = 3/168 (1%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRG+V+++RIEN+++RQVTFSKRR GLLKKA+E++VLCD +VA I+FS++G L+ + S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
+ + LEKY+ ++G+N E + S + +L+ ++E L++SQR+++G++L
Sbjct: 61 --GINKTLEKYNSCCYNAQGSNSALAGGEHQ-SWYQEMSRLKTKLECLQRSQRHMLGEDL 117
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELETLH 168
L+++++QQLE Q++ SL+ R RK +++ME+ L +K +L L+
Sbjct: 118 GPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELN 165
>Os04g0580700 MADS box transcription factor MADS17
Length = 254
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 121/168 (72%), Gaps = 3/168 (1%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRG+V+++RIEN+++RQVTFSKRR GLLKKA+E++VLCD +VA I+FS++G L+ + S+
Sbjct: 6 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 65
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
+ + LEKY+ ++G+N E + S + +L+ ++E L++SQR+++G++L
Sbjct: 66 --GINKTLEKYNSCCYNAQGSNSALAGGEHQ-SWYQEMSRLKTKLECLQRSQRHMLGEDL 122
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELETLH 168
L+++++QQLE Q++ SL+ R RK +++ME+ L +K +L L+
Sbjct: 123 GPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELN 170
>Os03g0753100 Transcription factor, MADS-box domain containing protein
Length = 239
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 120/180 (66%), Gaps = 17/180 (9%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGKV ++RIEN++SRQVTF+KRR GLLKKA+E+++LCD +VA ++FS G L+ ++SS
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
+ M + LE+Y R+ + + + E++ + +++ L+ +E L++SQRNL+G++L
Sbjct: 61 -SNMLKTLERYQRY-IYASQDAAAPTSDEMQNNYQ-EYVNLKAHVEILQQSQRNLLGEDL 117
Query: 121 DSLTLQDIQQLENQIDTSLNNIRS--------------RKEKLLMEKNTILEKKITELET 166
L +++QLE+Q+ +L IRS RKE++L + N +L++K+ E++
Sbjct: 118 APLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDV 177
>Os08g0531700 Similar to Developmental protein SEPALLATA2 (Agamous-like MADS box
protein AGL4)
Length = 310
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 122/207 (58%), Gaps = 36/207 (17%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRG+V+++RIEN+++RQVTF+KRR GLLKKA+E++VLCD +VA I+FS +G L+ + S+
Sbjct: 27 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 86
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQR------- 113
+ M + LEKY + V E + +++KL+ R+E L+++QR
Sbjct: 87 QS-MTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRQYYKSKH 145
Query: 114 ----------------------------NLMGQELDSLTLQDIQQLENQIDTSLNNIRSR 145
NL+G++LDSL +++++ LE Q+D+SL ++R+
Sbjct: 146 RLCLVRSKVWNLVKIRDDVTEKLCMYERNLLGEDLDSLGIKELESLEKQLDSSLKHVRTT 205
Query: 146 KEKLLMEKNTILEKKITELETLHTCIR 172
+ K L+++ T L++K + + C+R
Sbjct: 206 RTKHLVDQLTELQRKEQMVSEANRCLR 232
>Os02g0731200 Transcription factor MADS57
Length = 241
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 108/171 (63%), Gaps = 20/171 (11%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGK+ +RRI+N SRQVTFSKRR GLLKKA E+++LCD +V +VFS+ G L+ ++S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSS- 59
Query: 61 HTTMERILEKYD--RHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQ 118
T M+ ++++Y + ELL G N E + + LR ++ L++S + LMG+
Sbjct: 60 -TNMKTVIDRYTNAKEELL--GGNATSEIKIWQ----REAASLRQQLHNLQESHKQLMGE 112
Query: 119 ELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELETLHT 169
EL L ++D+Q LEN+++ SL NIR RK+ LL +E+E LH
Sbjct: 113 ELSGLGVRDLQGLENRLEISLRNIRMRKDNLLK----------SEIEELHV 153
>Os01g0886200 Similar to AGAMOUS homolog
Length = 265
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 118/173 (68%), Gaps = 2/173 (1%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGK++++RIEN+ SRQVTF KRR GLLKKA+E+A+LCD ++A IVFS++G L+ +++
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
++T I E+Y + + G+ + + + + K+R +I+ L+ + R+L+G+ +
Sbjct: 61 NSTRSTI-ERYKKASASTSGSAPVIDVNSHQ-YFQQEAAKMRHQIQTLQNANRHLIGESI 118
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELETLHTCIRA 173
++T ++++ LEN+++ ++ IRS+K +LL + ++K+ +L+ + +RA
Sbjct: 119 GNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRA 171
>Os03g0122600 Transcription factor, MADS-box domain containing protein
Length = 230
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 107/160 (66%), Gaps = 5/160 (3%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
M RGK Q++RIEN SRQVTFSKRR GLLKKA E++VLCD +VA IVFS +G L+ +AS+
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
T ++ +E+Y + + GN +++ E + D L ++EAL+ +R L+G++L
Sbjct: 61 ST--QKTIERYRTYTKENIGNKTVQQDIE---QVKADADGLAKKLEALETYKRKLLGEKL 115
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKK 160
D +++++ LE +++ SL +IR RK KLL E+ L +K
Sbjct: 116 DECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREK 155
>Os04g0304400 Similar to MADS-box protein AGL16-II
Length = 227
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 114/177 (64%), Gaps = 24/177 (13%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGK+ ++RI+N ++RQVTFSKRR GL+KKA E+A+LCD DV IVFS G L+ ++SS
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMS------YDHIKLRGRIEALKKSQRN 114
+M+ I+E+Y EE L MS + LR +++ L + R
Sbjct: 61 --SMKSIIERY---------QEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQ 109
Query: 115 LMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLM-------EKNTILEKKITEL 164
L+G+E+ + T++D+Q L+NQ++ SL++IR++K++LL EK ++++K+ +EL
Sbjct: 110 LLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSEL 166
>Os08g0431900 Transcription factor MADS23
Length = 159
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 109/167 (65%), Gaps = 15/167 (8%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGK++++RI+N SRQVTFSKRR GL KKA E+++LCD +V +VFS+ L+ +ASS
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
Query: 61 HTTMERILEKY-----DRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNL 115
+M+ I+E+Y D H+ ++ + + + E + LR ++ L++ R L
Sbjct: 61 --SMKSIIERYNETKEDPHQTMNASSEA--KLWQQEAA------SLRQQLHNLQEYHRQL 110
Query: 116 MGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKIT 162
+GQ+L L ++D+Q LE++++ SL NIR RK+ ++M++ L +K+
Sbjct: 111 LGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKVV 157
>Os02g0579600 Transcription factor MADS27
Length = 240
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 109/157 (69%), Gaps = 13/157 (8%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGK+ +RRI+N SRQVTFSKRR G+ KKA E+A+LCD +V ++FS+ G L+ Y+S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSS- 59
Query: 61 HTTMERILEKY----DRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLM 116
T+M+ ++++Y D + ++ N+ + +F + E + LR ++ L+++ R LM
Sbjct: 60 -TSMKSVIDRYGKSKDEQQAVANPNSEL-KFWQREAA------SLRQQLHNLQENHRQLM 111
Query: 117 GQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEK 153
G++L L ++++Q LENQ++ SL ++R++K+ +L+++
Sbjct: 112 GEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDE 148
>Os02g0170300 Similar to MADS box protein ZMM17
Length = 260
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 97/160 (60%), Gaps = 6/160 (3%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGK++++RIEN +RQVTFSKRR GLLKKA+E+AVLCD V ++FS+ G +F Y S
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
++ ++E Y + N EE + + + ++R +E L R G +L
Sbjct: 61 TCSLRELIEHYQ-----TVTNTHFEEINH-DQQIFVEMTRMRNEMEKLDGGIRRFTGDDL 114
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKK 160
+LTL DI LE Q++ S+ +R+RK +LL ++ L +K
Sbjct: 115 SNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRK 154
>Os12g0207000 Transcription factor
Length = 270
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 113/167 (67%), Gaps = 5/167 (2%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRG+++++RIEN SRQVTF KRR GLLKKA+E++VLCD +VA IVFS++G L+ Y S+
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SN 59
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSY--DHIKLRGRIEALKKSQRNLMGQ 118
+ ++ +++Y + + G+ E+ Y + KLR +I+ L+ + ++L+G
Sbjct: 60 NNNVKATIDRYKKAH--ACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGD 117
Query: 119 ELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELE 165
+ +L+L++++QLE++++ ++ IR+RK +LL + + K+ EL+
Sbjct: 118 NVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQ 164
>Os05g0203800 Similar to MADS box protein
Length = 233
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 106/165 (64%), Gaps = 8/165 (4%)
Query: 3 RGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHT 62
RGK++++RIEN +RQVTF KRR GLLKKA+E++VLCD +VA +VFS++G L+ Y S+
Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEY--SNN 102
Query: 63 TMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDH--IKLRGRIEALKKSQRNLMGQEL 120
+++ +E+Y + + + + E + Y KL+ +I L+ S R L+G +
Sbjct: 103 SVKETIERYKKANSDTSNASTVAEI----NAQHYQQEAAKLKQQITNLQNSNRTLVGDNI 158
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELE 165
++ ++++QLE ++D L IR+RK +LL + ++++ TEL+
Sbjct: 159 TTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQ 203
>AF141965
Length = 233
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 104/150 (69%), Gaps = 4/150 (2%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
M RG+ +++RIEN SRQVTFSKRR GLLKKA E++VLCD +VA IVFS +G L+ +AS+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
++++ +++Y + N I++ + + D + L ++EAL +S+R ++G+ L
Sbjct: 61 -PSLQKTIDRYKAYTKDHVNNKTIQQDIQ---QVKDDTLGLAKKLEALDESRRKILGENL 116
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLL 150
+ ++++++ LE +++ SL+NIR +K +LL
Sbjct: 117 EGCSIEELRGLEMKLEKSLHNIRLKKTELL 146
>Os10g0536100 Transcription factor MADS56
Length = 230
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 109/160 (68%), Gaps = 4/160 (2%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
M RG+ +++RIEN SRQVTFSKRR GLLKKA E++VLCD +VA IVFS +G L+ +AS+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
++++ +++Y + N I++ + + D + L ++EAL +S+R ++G+ L
Sbjct: 61 -PSLQKTIDRYKAYTKDHVNNKTIQQDIQ---QVKDDTLGLAKKLEALDESRRKILGENL 116
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKK 160
+ ++++++ LE +++ SL+ IR +K +LL ++ L++K
Sbjct: 117 EGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEK 156
>Os02g0761000 Similar to Transcription factor MADS55
Length = 228
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 108/168 (64%), Gaps = 13/168 (7%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
M R + +++RIE+ +RQVTFSKRR GL KKA E++VLCD DVA IVFS+ G L H+ASS
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIE-EFPELEGSMSYDHIKLRGRIEALKKSQ---RNLM 116
+M I++KY+ H NN+ + E P L+ ++ +H K E L ++ R +
Sbjct: 61 --SMNEIIDKYNTH-----SNNLGKAEQPSLD--LNLEHSKYAHLNEQLAEASLRLRQMR 111
Query: 117 GQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITEL 164
G+EL+ L++ ++QQLE ++ L+ + K++ ME+ + L++K ++L
Sbjct: 112 GEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQL 159
>Os04g0614100 Transcription factor, MADS-box domain containing protein
Length = 178
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 90/146 (61%), Gaps = 6/146 (4%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRG+V++++IEN +RQVTFSKRR GLLKKA+E+A+LCD + IVFS G ++ Y+S
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
+ I ++Y L + EE +++ + + +++ L+ R MG +L
Sbjct: 61 PWRIANIFDRY-----LKAPSTRFEEM-DVQQRIIQEMTRMKDENNRLRIIMRQYMGDDL 114
Query: 121 DSLTLQDIQQLENQIDTSLNNIRSRK 146
SLTLQD+ LE QI+ SL +R RK
Sbjct: 115 ASLTLQDVSNLEQQIEFSLYKVRLRK 140
>Os06g0667200 MADS30
Length = 221
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 97/151 (64%), Gaps = 5/151 (3%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MG+GK++++RIE+ RQVTFSKRR G LKKA+E+AVLCD V +VFS KG LF + S
Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSP 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
+ + +Y+ ++ N ++E + M + +LR I+ L+ S R G++L
Sbjct: 61 PVILMELFHRYE----ITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDL 116
Query: 121 DSL-TLQDIQQLENQIDTSLNNIRSRKEKLL 150
S+ T+ ++ QL+ Q+++SL+ + +RK++L+
Sbjct: 117 SSVSTVDELSQLQLQLESSLSKVHARKDELM 147
>Os01g0883100 Similar to PISTILLATA-like MADS box protein
Length = 209
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 104/171 (60%), Gaps = 17/171 (9%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGK++++RIEN +RQVTFSKRR G+LKKA EI+VLCD +V ++FS+ G L+ Y S
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
T++ RILEKY + N+ + E S+S + +++ + ++ R+L G++L
Sbjct: 61 KTSLSRILEKY-------QTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDL 113
Query: 121 DSLTLQDIQQLENQIDTSLNNIRS----------RKEKLLMEKNTILEKKI 161
+SL +++ +E +D + N+ R +K+L ++N +L K+
Sbjct: 114 NSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKL 164
>Os06g0712700 MADS-box protein SPW1
Length = 224
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 100/162 (61%), Gaps = 9/162 (5%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGK++++RIEN +RQVT+SKRR G++KKA E+ VLCD VA I+FS+ G + S
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 61 HTTMERILEKYDRHELLSEGNNV-IEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQE 119
T ++ I ++Y + + G ++ IE++ ++ ++S H+K R L+ R MG++
Sbjct: 61 STDIKGIFDRYQQ----AIGTSLWIEQYENMQRTLS--HLKDINR--NLRTEIRQRMGED 112
Query: 120 LDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKI 161
LD L +++ LE +D +L +R RK ++ + +KK+
Sbjct: 113 LDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKKV 154
>Os03g0186600 Transcription factor, MADS-box domain containing protein
Length = 248
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 99/165 (60%), Gaps = 10/165 (6%)
Query: 3 RGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHT 62
R ++ +RRI+N +RQVTFSKRR GL KKA E+++LCD +V +VFSA G LF +AS T
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAS--T 79
Query: 63 TMERILEKYDRHELLSEGNNVIEEFP---ELEGSMSYDHIKLRGRIEALKKSQRNLMGQE 119
+ME+I+++Y+ H + P +L+G S +L+ + R + G+E
Sbjct: 80 SMEQIIDRYNSH-----SKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEE 134
Query: 120 LDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITEL 164
L L ++ +Q+LE +++ L ++ K K ++++ LE+K +L
Sbjct: 135 LHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQL 179
>Os08g0112700 Similar to TAGL12 transcription factor
Length = 222
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 102/181 (56%), Gaps = 27/181 (14%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
M RGKVQ+RRIEN V RQVTF KRR GLLKKA E+++LC+ D+ I+FSA G L+ A++
Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
Query: 61 HTTMERILEKYDR---HELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMG 117
TME ++E+Y + + G+ ++ P+ E + L+ I L+K R + G
Sbjct: 61 -GTMEELIERYKSASGEQANACGDQRMD--PKQEAMV------LKQEINLLQKGLRYIYG 111
Query: 118 QELDS-LTLQDIQQLENQIDTSLNNIRS--------------RKEKLLMEKNTILEKKIT 162
+ +T++++ LE ++ + NIRS KE +L N IL++KI
Sbjct: 112 NRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIV 171
Query: 163 E 163
E
Sbjct: 172 E 172
>Os05g0423400 Similar to PISTILLATA-like MADS box protein
Length = 215
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 104/181 (57%), Gaps = 22/181 (12%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGK++++RIEN +RQVTFSKRR G+LKKA EI VLCD +V ++FS+ G L Y +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTP 60
Query: 61 HTT-----MERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNL 115
TT + RILEKY + N+ + E S+S + +++ + ++ R++
Sbjct: 61 KTTSVFPPLSRILEKY-------QTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHM 113
Query: 116 MGQELDSLTLQDIQQLENQIDTSLNNIRS----------RKEKLLMEKNTILEKKITELE 165
G++L+SL +++ +E ++ N+R R EK+L +++ +L ++ + E
Sbjct: 114 KGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLEDEHKMLAFRVHQQE 173
Query: 166 T 166
Sbjct: 174 V 174
>Os12g0206800 Transcription factor, MADS-box domain containing protein
Length = 202
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 101/191 (52%), Gaps = 30/191 (15%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
M RGKVQ+RRIEN V RQVTF KRR GLLKKA E++VLCD DV I+FS++G L H ++
Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKL-HELAT 59
Query: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIK------LRGRIEALKKSQRN 114
+ M ++E+Y +NV E G++ + LR I+ L++ R+
Sbjct: 60 NGNMHNLVERYQ--------SNVAGGQME-PGALQRQQVAEQGIFLLREEIDLLQRGLRS 110
Query: 115 LMGQELDSLTLQDIQQLENQIDTSLNNIRS--------------RKEKLLMEKNTILEKK 160
G +TL + LE ++ + IR+ KE +L E N +L++K
Sbjct: 111 TYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEK 170
Query: 161 ITELETLHTCI 171
+ E + L+ +
Sbjct: 171 VKEQQKLYMSL 181
>Os06g0217300 Similar to Transcription factor MADS55
Length = 223
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 94/153 (61%), Gaps = 10/153 (6%)
Query: 15 VSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRH 74
+RQVTFSKRR GL KKA E+AVLCD DVA +VFS+ G L +ASS+ M I++KY H
Sbjct: 15 AARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSN--MNEIIDKYTTH 72
Query: 75 ELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQ---RNLMGQELDSLTLQDIQQL 131
S+ ++ P ++ ++ +H K E L ++ R + G+EL+ L+++++QQ+
Sbjct: 73 ---SKNLGKTDKQPSID--LNLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQM 127
Query: 132 ENQIDTSLNNIRSRKEKLLMEKNTILEKKITEL 164
E ++ L + K++ M++ + L++K +L
Sbjct: 128 EKNLEAGLQRVLCTKDQQFMQEISELQRKGIQL 160
>Os01g0201700 Similar to MADS box protein
Length = 154
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYA-- 58
MGRGK++++RIEN +RQVTF KRR GLLKKA+E++VLCD +VA IVFS++G L+ YA
Sbjct: 41 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 100
Query: 59 SSHTTMER 66
S +T+ER
Sbjct: 101 SVKSTVER 108
>Os04g0461300 Transcription factor, MADS-box domain containing protein
Length = 94
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRGK+ +RRI+N SRQVTFSKRR G+ KKA E+A+LCD +V ++FS+ G L+ YAS
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAS- 59
Query: 61 HTTMERILEKYDR 73
T+M+ ++++Y R
Sbjct: 60 -TSMKSVIDRYGR 71
>Os01g0922800 Similar to MADS-box protein PTM5
Length = 164
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
Query: 3 RGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHT 62
RG+VQ+RRIE++ SRQV FSKRR GL KKA E+A+LCDV+VA +VFS G L+ Y+SS
Sbjct: 4 RGRVQLRRIEDKASRQVRFSKRRAGLFKKAFELALLCDVEVALLVFSPVGKLYEYSSSS- 62
Query: 63 TMERILEKYDRHELLS 78
I YDR++ +
Sbjct: 63 ----IEGTYDRYQQFA 74
>Os01g0726400 Transcription factor, MADS-box domain containing protein
Length = 196
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 86/154 (55%), Gaps = 18/154 (11%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGRG+ +++RIEN RQ TF KRR GL KKA E+AVLCD D+ ++FSA G L+H+ S
Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSP 60
Query: 61 HTTMERILEKYDRHELLSE----GNNVIEEFPELE--GSMSYDHIKLRGRIEALKKSQRN 114
T+ + E +R+E + + E ELE GSM + L+K R
Sbjct: 61 --TVPSVREFVERYEATTHTKVWADIRQERRAELEKVGSM----------CDLLEKQLRF 108
Query: 115 LMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEK 148
+ + + T+ ++ LE+ ++ ++ +RS K++
Sbjct: 109 MTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDR 142
>Os06g0223300 Similar to TDR8 protein
Length = 360
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGR K+Q++RIEN +RQVTFSKRR GL+KKA+E++VLCD+D+A ++FS G L H+ S
Sbjct: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHF-SG 59
Query: 61 HTTMERILEKY 71
+E +L +Y
Sbjct: 60 RRRIEDVLTRY 70
>Os08g0494100
Length = 337
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGR K+ ++RIEN +RQVTFSKRR GL+KKA+E++VLCD+DVA ++FS G L H++
Sbjct: 1 MGRVKLPIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDVALLMFSPSGRLSHFSGR 60
Query: 61 HTTMERI-----LEKYDRHELL 77
+ I L ++DR E +
Sbjct: 61 RGVEDVILRYMNLSEHDRGEAI 82
>Os01g0975800
Length = 208
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
+GR K+++RRIE+E +RQV FSKRR G KKA E+++LC DVAA+VFS G + +
Sbjct: 15 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSF--G 72
Query: 61 HTTMERILEKY 71
H ++E +LE++
Sbjct: 73 HPSVECLLERF 83
>Os09g0116800
Length = 208
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
+GR K+++RRIE+E +RQV FSKRR G KKA E+++LC DVAA+VFS G + +
Sbjct: 13 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSF--G 70
Query: 61 HTTMERILEKY 71
H ++E +L+++
Sbjct: 71 HPSVEFLLDRF 81
>Os06g0108100
Length = 767
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 8 VRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMER 66
+RRIE+ RQVTFSKRR GLLKKA E++VLCD +VA +VFS +G FH+AS+ + R
Sbjct: 1 MRRIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPRGRFFHFASAPSPFYR 59
>Os06g0347700
Length = 74
Score = 78.2 bits (191), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
M RGK + RIEN SRQVTFSKRR GL KKA E+A+LCD V +VFS+ G L+ Y++S
Sbjct: 1 MVRGKTVISRIENTTSRQVTFSKRRSGLFKKAKELAILCDAQVGVLVFSSTGRLYDYSNS 60
Query: 61 HTTME 65
+E
Sbjct: 61 SVVVE 65
>Os06g0503500
Length = 210
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
+GR ++++RRI+N RQVTFSKRR GL KKA E++ LC VA + FS+ GN+F +
Sbjct: 10 LGRQRIEIRRIDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFAFG-- 67
Query: 61 HTTMERILEKYD 72
T++ ++ ++D
Sbjct: 68 QPTVDAVVRRFD 79
>Os02g0104100
Length = 103
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 11/72 (15%)
Query: 2 GRGKVQVR-----------RIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSA 50
R KV+VR RIE+ SRQVTFSKRR GLLKKA E++VLCD +VA IVFS
Sbjct: 31 SRKKVEVRSAGRRGRREMRRIEDATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSP 90
Query: 51 KGNLFHYASSHT 62
+G L+ +AS+ +
Sbjct: 91 RGRLYQFASASS 102
>Os08g0531900 Similar to MADS box transcription factor-like protein (MADS-box
protein AGL72)
Length = 69
Score = 72.0 bits (175), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 6 VQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
V++RRIE+ SRQV FSKRR GL KKA+E++VLCD VA +VFS G L+ +ASS
Sbjct: 13 VELRRIEDRTSRQVRFSKRRSGLFKKAYELSVLCDAQVALLVFSPAGRLYEFASS 67
>Os12g0407000
Length = 194
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGR ++++RRI+N+ RQVTF+KRR GL KKA E+A+L VA +VFS ++ YA
Sbjct: 10 MGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHV--YAFG 67
Query: 61 HTTMERILEKY 71
H +++ +L Y
Sbjct: 68 HPSVDAVLRSY 78
>Os11g0658700 Transcription factor, MADS-box domain containing protein
Length = 385
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
MGR K++++++EN R VT+SKRR G+LKKA E+++LCD+ + ++FS
Sbjct: 1 MGRVKLKIKKLENSSGRHVTYSKRRSGILKKAKELSILCDIPLILLMFSPNDKPTICVGD 60
Query: 61 HTTMERILEKY 71
H+++E ++ KY
Sbjct: 61 HSSIEDVITKY 71
>Os05g0203600 Transcription factor, MADS-box domain containing protein
Length = 100
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 11 IENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTM 64
IE+ RQVTF KR GLLKKA+E+++LCD +VA IVFS++G L+ Y+++ +
Sbjct: 36 IEDTADRQVTFCKRCNGLLKKAYELSMLCDAEVALIVFSSRGRLYEYSNNRYCI 89
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,798,557
Number of extensions: 239159
Number of successful extensions: 1075
Number of sequences better than 1.0e-10: 50
Number of HSP's gapped: 1042
Number of HSP's successfully gapped: 50
Length of query: 233
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 135
Effective length of database: 11,918,829
Effective search space: 1609041915
Effective search space used: 1609041915
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 154 (63.9 bits)