Os07g0108900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MADS15 protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0108900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : MADS15 protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 561.95 | 1.11 | 7.61 | 13.9 | 1 | -2.08 | -0.106 | 29.4 | -0.366 | 6.04 | 24.44 | 4107 | -- | -- |
| 607.88 | 1.15 | 8.84 | 3.66 | 0.839 | 3.25 | 1.79 | -- | -3.32 | 3.34 | 31.9 | 47520 | -- | -- |
| 561.89 | 1.1 | 7.6 | 13.9 | 1.01 | -2.06 | -- | 29.4 | -0.36 | 6.04 | 24.38 | 4092 | -- | -- |
| 580.12 | 1.12 | 8.8 | 3.47 | 1.1 | 3.45 | -- | -- | -3.25 | 6.34 | 32.09 | 47520 | -- | -- |
| 613.43 | 1.15 | 7.61 | 14 | -- | -2.13 | -- | 30.3 | -0.324 | -- | 24.5 | 4073 | -- | -- |
| 881.48 | 1.39 | 8.52 | 6.84 | 1.09 | -- | 0.306 | -- | -2 | 5.95 | -- | -- | -- | -- |
| 881.62 | 1.39 | 8.52 | 6.85 | 1.1 | -- | -- | -- | -2 | 6.08 | -- | -- | -- | -- |
| 642.73 | 1.18 | 8.83 | 3.51 | -- | 3.44 | -- | -- | -3.24 | -- | 32.03 | 47520 | -- | -- |
| 734.1 | 1.26 | 8.95 | -- | 1.14 | 5.18 | -- | -- | -3.89 | 6.33 | 32.54 | 47520 | -- | -- |
| 943.83 | 1.44 | 8.54 | 6.88 | -- | -- | -- | -- | -1.97 | -- | -- | -- | -- | -- |
| 2116.62 | 2.15 | 8.69 | -- | 1.2 | -- | -- | -- | -2.76 | 5.79 | -- | -- | -- | -- |
| 800.65 | 1.32 | 8.98 | -- | -- | 5.21 | -- | -- | -3.92 | -- | 32.41 | 47520 | -- | -- |
| 2191.2 | 2.18 | 8.71 | -- | -- | -- | -- | -- | -2.74 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 430.11 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 4 | 436.68 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 7 |
| 37 | 441.27 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 55 | 444.41 | radiation | 10.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 69 | 445.52 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 71 | 445.96 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 112 | 452.89 | wind | 5.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 119 | 455.86 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 8 | 6 |
| 120 | 455.91 | wind | 5.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 122 | 456.52 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 123 | 456.67 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 149 | 459.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 153 | 459.84 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 160 | 461.58 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 162 | 462.49 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 166 | 462.73 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 169 | 462.84 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 170 | 462.86 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 171 | 462.94 | radiation | 10.0 | 43200 | > th | dose independent | no | NA | NA |
| 257 | 463.55 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 283 | 466.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 9 |
| 287 | 466.64 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 290 | 466.93 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 298 | 467.93 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 9 |
| 299 | 467.93 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 9 |
| 301 | 468.02 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 302 | 468.52 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 308 | 469.12 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 8 |
| 312 | 469.19 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 313 | 469.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 315 | 469.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 6 |
| 318 | 469.67 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 321 | 469.90 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 322 | 469.90 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 325 | 470.24 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 328 | 470.97 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 333 | 471.15 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 354 | 472.38 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 381 | 473.81 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 9 | 14 |
| 397 | 473.99 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 2 | 17 |
| 407 | 474.43 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 9 | 15 |
| 419 | 474.78 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 421 | 474.82 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 426 | 474.98 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 434 | 475.18 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 436 | 475.23 | wind | 7.0 | 43200 | > th | dose independent | rect. | 21 | 8 |
| 438 | 475.24 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 24 | 19 |
| 441 | 475.39 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 442 | 475.42 | humidity | 70.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 445 | 475.49 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 7 | 8 |
| 469 | 476.07 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 511 | 476.91 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 532 | 477.28 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 536 | 477.39 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 538 | 477.40 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 547 | 477.65 | humidity | 70.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 552 | 477.78 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 636 | 479.06 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 644 | 479.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 645 | 479.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 674 | 479.40 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 675 | 479.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 692 | 479.62 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 697 | 479.73 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 4 | 20 |
| 707 | 479.88 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 798 | 480.73 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 12 |
| 799 | 480.75 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 828 | 481.04 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 874 | 481.70 | humidity | 70.0 | 43200 | < th | dose independent | no | NA | NA |
| 932 | 482.36 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 944 | 482.47 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 957 | 482.59 | wind | 5.0 | 43200 | > th | dose independent | rect. | 22 | 11 |