BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0108900 Os07g0108900|AF345911
(267 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0108900 MADS15 protein 389 e-108
Os03g0752800 MADS14 protein 276 9e-75
AK069331 256 1e-68
Os07g0605200 MADS box transcription factor 18 (OsMADS18) (M... 199 2e-51
Os09g0507200 MADS box protein 163 1e-40
Os03g0753100 Transcription factor, MADS-box domain containi... 162 4e-40
Os02g0682200 Similar to MADS box protein 160 1e-39
Os06g0162800 MADS box protein 150 7e-37
AF109153 150 8e-37
Os04g0580700 MADS box transcription factor MADS17 150 9e-37
Os03g0215400 Box protein (MADS box protein MADS1) 149 2e-36
Os08g0531700 Similar to Developmental protein SEPALLATA2 (A... 144 9e-35
Os12g0501700 Transcription factor, MADS-box domain containi... 134 1e-31
Os01g0886200 Similar to AGAMOUS homolog 129 3e-30
Os12g0207000 Transcription factor 125 3e-29
Os02g0579600 Transcription factor MADS27 124 6e-29
Os05g0203800 Similar to MADS box protein 122 3e-28
Os02g0731200 Transcription factor MADS57 120 1e-27
Os03g0122600 Transcription factor, MADS-box domain containi... 117 9e-27
Os04g0304400 Similar to MADS-box protein AGL16-II 116 1e-26
Os08g0431900 Transcription factor MADS23 116 1e-26
Os10g0536100 Transcription factor MADS56 115 3e-26
AF141965 115 4e-26
Os01g0201700 Similar to MADS box protein 112 3e-25
Os08g0112700 Similar to TAGL12 transcription factor 108 6e-24
Os01g0883100 Similar to PISTILLATA-like MADS box protein 107 1e-23
Os12g0206800 Transcription factor, MADS-box domain containi... 105 3e-23
Os02g0170300 Similar to MADS box protein ZMM17 101 7e-22
Os05g0423400 Similar to PISTILLATA-like MADS box protein 98 6e-21
Os06g0712700 MADS-box protein SPW1 98 7e-21
Os04g0461300 Transcription factor, MADS-box domain containi... 97 9e-21
Os04g0614100 Transcription factor, MADS-box domain containi... 96 3e-20
Os06g0223300 Similar to TDR8 protein 95 4e-20
Os01g0922800 Similar to MADS-box protein PTM5 95 6e-20
Os06g0667200 MADS30 94 1e-19
Os02g0761000 Similar to Transcription factor MADS55 92 3e-19
Os03g0186600 Transcription factor, MADS-box domain containi... 91 7e-19
Os08g0494100 90 2e-18
Os02g0104100 85 6e-17
Os06g0217300 Similar to Transcription factor MADS55 82 6e-16
Os01g0975800 81 9e-16
Os06g0347700 80 1e-15
Os09g0116800 80 1e-15
Os06g0108100 80 2e-15
Os08g0531900 Similar to MADS box transcription factor-like ... 79 5e-15
Os01g0726400 Transcription factor, MADS-box domain containi... 77 1e-14
Os06g0503500 77 1e-14
Os05g0203600 Transcription factor, MADS-box domain containi... 76 3e-14
Os12g0407000 74 1e-13
Os05g0303400 70 2e-12
Os11g0658700 Transcription factor, MADS-box domain containi... 68 6e-12
Os02g0164450 68 7e-12
>Os07g0108900 MADS15 protein
Length = 267
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/267 (75%), Positives = 201/267 (75%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGED
Sbjct: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESL 120
Query: 121 XXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNVR 180
KHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNVR
Sbjct: 121 NLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNVR 180
Query: 181 GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPPQNICYPPVMMGERNDXXX 240
G LLPPQNICYPPVMMGERND
Sbjct: 181 GQQQVGQWDQTQVQAQAQAQPQAQTSSSSSSMLRDQQALLPPQNICYPPVMMGERNDAAA 240
Query: 241 XXXXXXQGQVQLRIGGLPPWMLSHLNA 267
QGQVQLRIGGLPPWMLSHLNA
Sbjct: 241 AAAVAAQGQVQLRIGGLPPWMLSHLNA 267
>Os03g0752800 MADS14 protein
Length = 246
Score = 276 bits (707), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 161/268 (60%), Positives = 176/268 (65%), Gaps = 23/268 (8%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA I+FS KGKLYEYATD
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
S MDKILERYERYSYAEK LISAES+++GNWCHEYRKLKAK+ETIQKC KHLMGED
Sbjct: 61 SCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESL 120
Query: 121 XXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNVR 180
KHI SRKS LMLESI+ELQ+KE+SLQEENK LQKELVE+QK +
Sbjct: 121 NLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQK 180
Query: 181 GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPPQNICYPPVMMGERNDXXX 240
LP NI P GER +
Sbjct: 181 QQVQWDQTQPQTSSSSSSFMMREA---------------LPTTNISNYPAAAGERIEDVA 225
Query: 241 XXXXXXQGQVQ-LRIGGLPPWMLSHLNA 267
GQ Q +RI GLPPWMLSH+N
Sbjct: 226 A------GQPQHVRI-GLPPWMLSHING 246
>AK069331
Length = 284
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/168 (77%), Positives = 140/168 (83%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA I+FS KGKLYEYATD
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
S MDKILERYERYSYAEK LISAES+++GNWCHEYRKLKAK+ETIQKC KHLMGED
Sbjct: 61 SCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESL 120
Query: 121 XXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKAL 168
KHI SRKS LMLESI+ELQ+KE+SLQEENK L
Sbjct: 121 NLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVL 168
>Os07g0605200 MADS box transcription factor 18 (OsMADS18) (MADS box protein 2)
(MADS box protein 28) (FDRMADS7)
Length = 249
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 129/179 (72%), Gaps = 1/179 (0%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRG VQL+RIENKINRQVTFSKRRNGLLKKAHEISVLCDA+VA IVFS KGKLYE+++
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
S M+ ILERY+RYS+ E+A++ +E + NW EY LK+K++ +QK + L+GE
Sbjct: 61 SSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTL 120
Query: 121 XXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKEL-VERQKN 178
KHI S+K+ L+ ESISELQKKE+SL+ +N LQK + E++KN
Sbjct: 121 TIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKN 179
>Os09g0507200 MADS box protein
Length = 248
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 123/176 (69%), Gaps = 2/176 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
Query: 61 SRMDKILERYERYSYA--EKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXX 118
M + LERY+++SY + A+ + E+E + +EY KLKA++E +Q+ ++L+GED
Sbjct: 61 QSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLG 120
Query: 119 XXXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174
+HI S ++ ML+ +++LQ++E+ L E NK L+++L E
Sbjct: 121 TLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEE 176
>Os03g0753100 Transcription factor, MADS-box domain containing protein
Length = 239
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 118/174 (67%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA ++FS G+LY++++
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
S M K LERY+RY YA + + S+ N EY LKA +E +Q+ ++L+GED
Sbjct: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
Query: 121 XXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174
K I SRK+ ++L+ + +L++KE+ LQ+ N+ L+++L E
Sbjct: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
>Os02g0682200 Similar to MADS box protein
Length = 250
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 115/172 (66%), Gaps = 2/172 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS- 59
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
+ + K LERY+ Y + +A SE++ +W HE KLKAK E +Q+ +HL+GED
Sbjct: 60 AGITKTLERYQHCCYNAQDSNNALSETQ-SWYHEMSKLKAKFEALQRTQRHLLGEDLGPL 118
Query: 121 XXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 172
RK+ LM+E + EL++KER L E N+ L+ +L
Sbjct: 119 SVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170
>Os06g0162800 MADS box protein
Length = 225
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGKV+LKRIENKI+RQVTF+KRRNGLLKKA+E+SVLCDAEVA I+FS +G+L+E++T
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 SRMDKILERYERYSYAEKAL-ISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXX 119
S M K LERY +Y + SA E+E + EY KLK ++E +Q ++L+GED
Sbjct: 61 SCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVP 120
Query: 120 XXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174
+I S K+ +L+ + EL++KE+ LQ+ NK L++++ E
Sbjct: 121 LSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQE 175
>AF109153
Length = 249
Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 112/173 (64%), Gaps = 2/173 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS- 59
Query: 61 SRMDKILERYERYSYAEKALISAESESE-GNWCHEYRKLKAKIETIQKCHKHLMGEDXXX 119
+ ++K LE+Y Y + SA + E +W E +LK K+E +Q+ +H++GED
Sbjct: 60 AGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 119
Query: 120 XXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 172
RK+ +M+E + +L++KER L E NK L+ +L
Sbjct: 120 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 172
>Os04g0580700 MADS box transcription factor MADS17
Length = 254
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 112/173 (64%), Gaps = 2/173 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +
Sbjct: 6 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS- 64
Query: 61 SRMDKILERYERYSYAEKALISAESESE-GNWCHEYRKLKAKIETIQKCHKHLMGEDXXX 119
+ ++K LE+Y Y + SA + E +W E +LK K+E +Q+ +H++GED
Sbjct: 65 AGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 124
Query: 120 XXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 172
RK+ +M+E + +L++KER L E NK L+ +L
Sbjct: 125 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 177
>Os03g0215400 Box protein (MADS box protein MADS1)
Length = 257
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 118/174 (67%), Gaps = 3/174 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGKV+LKRIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA I+FS +G+L+E+++
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
S M K LERY +Y + +A E+E N+ EY KLK ++E +Q ++++GED
Sbjct: 61 SCMYKTLERYRSCNYNSQD--AAAPENEINY-QEYLKLKTRVEFLQTTQRNILGEDLGPL 117
Query: 121 XXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174
K I SRK+ +L+ + +L+ KE+ LQ+ NK L+K+L E
Sbjct: 118 SMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQE 171
>Os08g0531700 Similar to Developmental protein SEPALLATA2 (Agamous-like MADS box
protein AGL4)
Length = 310
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 126/218 (57%), Gaps = 38/218 (17%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +
Sbjct: 27 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 86
Query: 61 SRMDKILERYERYSYA--EKALISAESESEGNWCHEYRKLKAKIETIQKCH--------- 109
M K LE+Y++ SYA E A+ + ESE +EY KLKA++E +Q+
Sbjct: 87 QSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRQYYKSKHR 146
Query: 110 --------------------------KHLMGEDXXXXXXXXXXXXXXXXXXXXKHIISRK 143
++L+GED KH+ + +
Sbjct: 147 LCLVRSKVWNLVKIRDDVTEKLCMYERNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTR 206
Query: 144 SHLMLESISELQKKERSLQEENKALQKELVERQKNVRG 181
+ +++ ++ELQ+KE+ + E N+ L+++L E +VRG
Sbjct: 207 TKHLVDQLTELQRKEQMVSEANRCLRRKL-EESNHVRG 243
>Os12g0501700 Transcription factor, MADS-box domain containing protein
Length = 233
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 108/165 (65%), Gaps = 3/165 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGKVQ++RIEN+++RQVTFSKRR GLLKKAHEI+VLCD +VAAIVFS KG L+ YA+
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 61 -SRMDKILERYERYSYAEKA--LISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDX 117
+ M++ILE+Y+R+ + +I E EG+ +++ KL+ +IE ++K ++LMG++
Sbjct: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
Query: 118 XXXXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQ 162
+I SRK L++E + L+KK L+
Sbjct: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELE 165
>Os01g0886200 Similar to AGAMOUS homolog
Length = 265
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 106/178 (59%), Gaps = 1/178 (0%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGK+++KRIENK +RQVTF KRRNGLLKKA+E+++LCDAE+A IVFS +G+LYE++
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 60
Query: 61 SRMDKILERYERYSYAEKALISA-ESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXX 119
+ +ERY++ S + + S + E K++ +I+T+Q ++HL+GE
Sbjct: 61 NSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGN 120
Query: 120 XXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQK 177
I S+K L+ I +QK+E LQ EN L+ ++ E ++
Sbjct: 121 MTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAER 178
>Os12g0207000 Transcription factor
Length = 270
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 113/184 (61%), Gaps = 6/184 (3%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRG++++KRIEN +RQVTF KRRNGLLKKA+E+SVLCDAEVA IVFS +G+LYEY+ +
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
Query: 61 SRMDKILERYERY----SYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGED 116
+ + ++RY++ S + LI E ++ + E KL+ +I+ +Q +KHL+G++
Sbjct: 61 NNVKATIDRYKKAHACGSTSGAPLI--EVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDN 118
Query: 117 XXXXXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQ 176
I +RK+ L+ I+ + K+E LQ +N L+ ++ E +
Sbjct: 119 VSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEE 178
Query: 177 KNVR 180
+ ++
Sbjct: 179 QQLQ 182
>Os02g0579600 Transcription factor MADS27
Length = 240
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGK+ ++RI+N +RQVTFSKRRNG+ KKA E+++LCDAEV ++FS G+LYEY++
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
S M +++RY + ++A+ + SE + W E L+ ++ +Q+ H+ LMGED
Sbjct: 61 S-MKSVIDRYGKSKDEQQAVANPNSELKF-WQREAASLRQQLHNLQENHRQLMGEDLSGL 118
Query: 121 XXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKEL-VERQKNV 179
+ + ++K H++++ I EL +K + +EN L K++ + RQ+N
Sbjct: 119 NVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENA 178
>Os05g0203800 Similar to MADS box protein
Length = 233
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 7/181 (3%)
Query: 3 RGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSR 62
RGK+++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVA +VFS +G+LYEY+ +S
Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS- 103
Query: 63 MDKILERYERYSYAEKALISAESESEGNWCH---EYRKLKAKIETIQKCHKHLMGEDXXX 119
+ E ERY A +A + +E N H E KLK +I +Q ++ L+G++
Sbjct: 104 ---VKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITT 160
Query: 120 XXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNV 179
I +RK+ L+ I +Q++E LQ +N L+ ++ E ++ +
Sbjct: 161 MNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGL 220
Query: 180 R 180
+
Sbjct: 221 Q 221
>Os02g0731200 Transcription factor MADS57
Length = 241
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 102/173 (58%), Gaps = 5/173 (2%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGK+ ++RI+N +RQVTFSKRRNGLLKKA E+S+LCDAEV +VFS G+LYE+++
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSS- 59
Query: 61 SRMDKILERYERYSYAEKALISAESESEGN-WCHEYRKLKAKIETIQKCHKHLMGEDXXX 119
+ M ++ +RY+ A++ L+ + SE W E L+ ++ +Q+ HK LMGE+
Sbjct: 60 TNMKTVI---DRYTNAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSG 116
Query: 120 XXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 172
++I RK +L+ I EL K + +EN L + L
Sbjct: 117 LGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSL 169
>Os03g0122600 Transcription factor, MADS-box domain containing protein
Length = 230
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 16/176 (9%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
M RGK Q+KRIEN +RQVTFSKRRNGLLKKA E+SVLCDAEVA IVFSP+GKLYE+A+
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 SRMDKILERYERYS-------YAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLM 113
S K +ERY Y+ ++ + +++++G L K+E ++ + L+
Sbjct: 61 S-TQKTIERYRTYTKENIGNKTVQQDIEQVKADADG--------LAKKLEALETYKRKLL 111
Query: 114 GEDXXXXXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQ 169
GE I RK+ L+ E +++L++KE L+++N+ L+
Sbjct: 112 GEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELR 167
>Os04g0304400 Similar to MADS-box protein AGL16-II
Length = 227
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 107/180 (59%), Gaps = 3/180 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGK+ +KRI+N +NRQVTFSKRR GL+KKA E+++LCDA+V IVFS G+LY++++
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
S M I+ERY+ L++ SE++ W E L+ +++ + ++ L+GE+
Sbjct: 61 S-MKSIIERYQEAGEEHCRLLNPMSEAKF-WQREVTTLRQQVQNLHHNNRQLLGEEISNF 118
Query: 121 XXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKEL-VERQKNV 179
I ++K L+ E I +L +K +Q+EN L+K+ + Q+N+
Sbjct: 119 TVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFNIAHQRNI 178
>Os08g0431900 Transcription factor MADS23
Length = 159
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 94/157 (59%), Gaps = 2/157 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGK+++KRI+N +RQVTFSKRR+GL KKA E+S+LCDAEV +VFS +LY++A+
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
S M I+ERY ++A SE++ W E L+ ++ +Q+ H+ L+G+
Sbjct: 61 S-MKSIIERYNETKEDPHQTMNASSEAKL-WQQEAASLRQQLHNLQEYHRQLLGQQLSGL 118
Query: 121 XXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKK 157
K+I RK ++M++ I EL +K
Sbjct: 119 DVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
>Os10g0536100 Transcription factor MADS56
Length = 230
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 104/171 (60%), Gaps = 5/171 (2%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
M RG+ +LKRIEN +RQVTFSKRRNGLLKKA E+SVLCDAEVA IVFSP+G+LYE+A+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 SRMDKILERYERYS--YAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXX 118
+ K ++RY+ Y+ + I + + + + L K+E + + + ++GE+
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKD---DTLGLAKKLEALDESRRKILGENLE 117
Query: 119 XXXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQ 169
I +K+ L+ + I++L++KER+L ++N+ L+
Sbjct: 118 GFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLR 168
>AF141965
Length = 233
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 104/171 (60%), Gaps = 5/171 (2%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
M RG+ +LKRIEN +RQVTFSKRRNGLLKKA E+SVLCDAEVA IVFSP+G+LYE+A+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 SRMDKILERYERYS--YAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXX 118
+ K ++RY+ Y+ + I + + + + L K+E + + + ++GE+
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKD---DTLGLAKKLEALDESRRKILGENLE 117
Query: 119 XXXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQ 169
+I +K+ L+ I++L++KER+L ++N+ L+
Sbjct: 118 GCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLR 168
>Os01g0201700 Similar to MADS box protein
Length = 154
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 77/112 (68%), Gaps = 7/112 (6%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA IVFS +G+LYEYA +
Sbjct: 41 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 100
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCH---EYRKLKAKIETIQKCH 109
S + ERY A ++ + +E N H E KL+ +I ++Q +
Sbjct: 101 S----VKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNAN 148
>Os08g0112700 Similar to TAGL12 transcription factor
Length = 222
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
M RGKVQL+RIEN ++RQVTF KRR GLLKKA E+S+LC+A++ I+FS GKLY+ AT
Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
Query: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXX 120
M++++ERY+ S E+A +A + + E LK +I +QK +++ G
Sbjct: 61 GTMEELIERYKSAS-GEQA--NACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEH 117
Query: 121 XXXXXXXXXXXXXXXXKHII-SRKSHLMLESISELQKKERSLQEENKALQKELVER 175
+ I S K +M++ I L+ KE L+ N+ LQ+++VE+
Sbjct: 118 MTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQ 173
>Os01g0883100 Similar to PISTILLATA-like MADS box protein
Length = 209
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 83/124 (66%), Gaps = 20/124 (16%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYAT- 59
MGRGK+++KRIEN NRQVTFSKRR+G+LKKA EISVLCDAEV ++FS GKLY+Y +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 60 DSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCH-------KHL 112
+ + +ILE+Y+ + + K L W +++ L A+I+ I+K + +HL
Sbjct: 61 KTSLSRILEKYQ--TNSGKIL----------WDEKHKSLSAEIDRIKKENDNMQIELRHL 108
Query: 113 MGED 116
GED
Sbjct: 109 KGED 112
>Os12g0206800 Transcription factor, MADS-box domain containing protein
Length = 202
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 100/181 (55%), Gaps = 9/181 (4%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
M RGKVQ++RIEN ++RQVTF KRR GLLKKA E+SVLCDA+V I+FS +GKL+E AT+
Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60
Query: 61 SRMDKILERYERYSYAEK----ALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGED 116
M ++ERY+ + AL + +G + L+ +I+ +Q+ + G
Sbjct: 61 GNMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFL-----LREEIDLLQRGLRSTYGGG 115
Query: 117 XXXXXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQ 176
I + K +M + I L+ KE L+E N+ LQ+++ E+Q
Sbjct: 116 AGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKEQQ 175
Query: 177 K 177
K
Sbjct: 176 K 176
>Os02g0170300 Similar to MADS box protein ZMM17
Length = 260
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGK+++KRIEN NRQVTFSKRR GLLKKA+E++VLCDA V ++FS GK++EY +
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 S-RMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXX 119
+ + +++E Y+ + I+ + + E +++ ++E + + G+D
Sbjct: 61 TCSLRELIEHYQTVTNTHFEEINHDQQ----IFVEMTRMRNEMEKLDGGIRRFTGDDLSN 116
Query: 120 XXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKAL 168
+ +RK L+ + + L++KE L+++N L
Sbjct: 117 LTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFL 165
>Os05g0423400 Similar to PISTILLATA-like MADS box protein
Length = 215
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 79/129 (61%), Gaps = 25/129 (19%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGK+++KRIEN NRQVTFSKRR G+LKKA EI VLCDAEV ++FS GKL +Y T
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTP 60
Query: 61 SR------MDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCH----- 109
+ +ILE+Y+ + + K L W +++ L A+I+ ++K +
Sbjct: 61 KTTSVFPPLSRILEKYQ--TNSGKIL----------WDEKHKSLSAEIDRVKKENDNMQI 108
Query: 110 --KHLMGED 116
+H+ GED
Sbjct: 109 ELRHMKGED 117
>Os06g0712700 MADS-box protein SPW1
Length = 224
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 20/189 (10%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGK+++KRIEN NRQVT+SKRR G++KKA E++VLCDA+VA I+FS GK +E+ +
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 61 SR-MDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHL------- 112
S + I +RY+ ++ W +Y ++ + ++ +++L
Sbjct: 61 STDIKGIFDRYQ------------QAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQR 108
Query: 113 MGEDXXXXXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 172
MGED K + RK H++ +KK + E + LQ+EL
Sbjct: 109 MGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKKVKHSYEAYETLQQEL 168
Query: 173 VERQKNVRG 181
R++ G
Sbjct: 169 GLREEPAFG 177
>Os04g0461300 Transcription factor, MADS-box domain containing protein
Length = 94
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRGK+ ++RI+N +RQVTFSKRRNG+ KKA E+++LCDAEV ++FS G+LYEYA+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAST 60
Query: 61 SRMDKILERYER 72
S M +++RY R
Sbjct: 61 S-MKSVIDRYGR 71
>Os04g0614100 Transcription factor, MADS-box domain containing protein
Length = 178
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRG+V+LK+IEN NRQVTFSKRR GLLKKA+E+++LCDA++ IVFS GK+YEY++
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 61 S-RMDKILERY 70
R+ I +RY
Sbjct: 61 PWRIANIFDRY 71
>Os06g0223300 Similar to TDR8 protein
Length = 360
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 57/70 (81%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGR K+Q+KRIEN NRQVTFSKRRNGL+KKA+E+SVLCD ++A ++FSP G+L ++
Sbjct: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
Query: 61 SRMDKILERY 70
R++ +L RY
Sbjct: 61 RRIEDVLTRY 70
>Os01g0922800 Similar to MADS-box protein PTM5
Length = 164
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Query: 3 RGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSR 62
RG+VQL+RIE+K +RQV FSKRR GL KKA E+++LCD EVA +VFSP GKLYEY++ S
Sbjct: 4 RGRVQLRRIEDKASRQVRFSKRRAGLFKKAFELALLCDVEVALLVFSPVGKLYEYSSSS- 62
Query: 63 MDKILERYERYSYAEKAL 80
++ +RY++++ A + L
Sbjct: 63 IEGTYDRYQQFAGARRDL 80
>Os06g0667200 MADS30
Length = 221
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 93/170 (54%), Gaps = 4/170 (2%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MG+GK+++KRIE+ RQVTFSKRR G LKKA+E++VLCDA+V +VFS KGKL+++ +
Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSP 60
Query: 61 SRMDKILERYERYSYAEK-ALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXX 119
+ ++E + RY + + + + E +L+ +I+ ++ + GED
Sbjct: 61 PVI--LMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSS 118
Query: 120 XXXXX-XXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKAL 168
+ +RK LM + + ++++ +++ E+N L
Sbjct: 119 VSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFL 168
>Os02g0761000 Similar to Transcription factor MADS55
Length = 228
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 6/174 (3%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
M R + ++KRIE+ RQVTFSKRR GL KKA E+SVLCDA+VA IVFS GKL +A+
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
Query: 61 SRMDKILERYERYSYAEKALISAESES-EGNWCH-EYRKLKAKIETIQKCHKHLMGEDXX 118
S M++I+++Y +S L AE S + N H +Y L ++ + + GE+
Sbjct: 61 S-MNEIIDKYNTHS---NNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELE 116
Query: 119 XXXXXXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 172
++ K +E ISELQ+K L EEN L+ ++
Sbjct: 117 GLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQV 170
>Os03g0186600 Transcription factor, MADS-box domain containing protein
Length = 248
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 3 RGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSR 62
R ++ ++RI+N RQVTFSKRR GL KKA E+S+LCDAEV +VFS GKL+++A+ S
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTS- 80
Query: 63 MDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDXXXXXX 122
M++I++RY +S + ++ + +G +LK ++ + + GE+
Sbjct: 81 MEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNV 140
Query: 123 XXXXXXXXXXXXXXKHIISRKSHLMLESISELQKKERSLQEENKALQKELVER 175
++ KS +L+ I L++K L EEN L KE V R
Sbjct: 141 EQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRL-KEQVSR 192
>Os08g0494100
Length = 337
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 56/74 (75%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGR K+ +KRIEN NRQVTFSKRRNGL+KKA+E+SVLCD +VA ++FSP G+L ++
Sbjct: 1 MGRVKLPIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDVALLMFSPSGRLSHFSGR 60
Query: 61 SRMDKILERYERYS 74
++ ++ RY S
Sbjct: 61 RGVEDVILRYMNLS 74
>Os02g0104100
Length = 103
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 46/51 (90%)
Query: 11 IENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDS 61
IE+ +RQVTFSKRR+GLLKKA E+SVLCDAEVA IVFSP+G+LY++A+ S
Sbjct: 51 IEDATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPRGRLYQFASAS 101
>Os06g0217300 Similar to Transcription factor MADS55
Length = 223
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 17 RQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYA 76
RQVTFSKRR GL KKA E++VLCDA+VA +VFS GKL ++A+ S M++I+++Y +S
Sbjct: 17 RQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS-SNMNEIIDKYTTHS-- 73
Query: 77 EKALISAESESEGNWCHEYRKLKAKIETIQKCH---KHLMGEDXXXXXXXXXXXXXXXXX 133
K L + + + E+ K + E + + + + GE+
Sbjct: 74 -KNLGKTDKQPSIDLNLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLE 132
Query: 134 XXXKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 172
+ ++ K ++ ISELQ+K L EEN L+ ++
Sbjct: 133 AGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQM 171
>Os01g0975800
Length = 208
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
+GR K++++RIE++ RQV FSKRR G KKA E+S+LC A+VAA+VFSP GK Y +
Sbjct: 15 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHP 74
Query: 61 SRMDKILERY 70
S ++ +LER+
Sbjct: 75 S-VECLLERF 83
>Os06g0347700
Length = 74
Score = 80.5 bits (197), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 47/61 (77%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
M RGK + RIEN +RQVTFSKRR+GL KKA E+++LCDA+V +VFS G+LY+Y+
Sbjct: 1 MVRGKTVISRIENTTSRQVTFSKRRSGLFKKAKELAILCDAQVGVLVFSSTGRLYDYSNS 60
Query: 61 S 61
S
Sbjct: 61 S 61
>Os09g0116800
Length = 208
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
+GR K++++RIE++ RQV FSKRR G KKA E+S+LC A+VAA+VFSP GK Y +
Sbjct: 13 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHP 72
Query: 61 SRMDKILERY 70
S ++ +L+R+
Sbjct: 73 S-VEFLLDRF 81
>Os06g0108100
Length = 767
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 44/52 (84%)
Query: 8 LKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYAT 59
++RIE+ RQVTFSKRR GLLKKA E+SVLCDAEVA +VFSP+G+ + +A+
Sbjct: 1 MRRIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPRGRFFHFAS 52
>Os08g0531900 Similar to MADS box transcription factor-like protein (MADS-box
protein AGL72)
Length = 69
Score = 78.6 bits (192), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 50/56 (89%)
Query: 6 VQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDS 61
V+L+RIE++ +RQV FSKRR+GL KKA+E+SVLCDA+VA +VFSP G+LYE+A+ +
Sbjct: 13 VELRRIEDRTSRQVRFSKRRSGLFKKAYELSVLCDAQVALLVFSPAGRLYEFASST 68
>Os01g0726400 Transcription factor, MADS-box domain containing protein
Length = 196
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGRG+ ++KRIEN RQ TF KRR+GL KKA E++VLCDA++ ++FS GKLY + +
Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSP 60
Query: 61 S--RMDKILERYERYSYA 76
+ + + +ERYE ++
Sbjct: 61 TVPSVREFVERYEATTHT 78
>Os06g0503500
Length = 210
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
+GR +++++RI+N RQVTFSKRRNGL KKA E+S LC A VA + FS G ++ +
Sbjct: 10 LGRQRIEIRRIDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFAFGQP 69
Query: 61 SRMDKILERYE 71
+ +D ++ R++
Sbjct: 70 T-VDAVVRRFD 79
>Os05g0203600 Transcription factor, MADS-box domain containing protein
Length = 100
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 11 IENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
IE+ +RQVTF KR NGLLKKA+E+S+LCDAEVA IVFS +G+LYEY+ +
Sbjct: 36 IEDTADRQVTFCKRCNGLLKKAYELSMLCDAEVALIVFSSRGRLYEYSNN 85
>Os12g0407000
Length = 194
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGR +++++RI+NK RQVTF+KRR GL KKA E+++L A VA +VFSP +Y +
Sbjct: 10 MGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHVYAFGHP 69
Query: 61 SRMDKILERY 70
S +D +L Y
Sbjct: 70 S-VDAVLRSY 78
>Os05g0303400
Length = 218
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 2 GRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDS 61
GR KV++KRIE K R V FSKRR L KA E+S+LC+A +AA+V SP G+ + +A S
Sbjct: 9 GRKKVEIKRIEKKDARDVCFSKRRQTLFNKAGELSLLCNANIAAVVISPAGRGFSFAHPS 68
Query: 62 RMDKILER 69
+D + +R
Sbjct: 69 -VDDVADR 75
>Os11g0658700 Transcription factor, MADS-box domain containing protein
Length = 385
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
MGR K+++K++EN R VT+SKRR+G+LKKA E+S+LCD + ++FSP K D
Sbjct: 1 MGRVKLKIKKLENSSGRHVTYSKRRSGILKKAKELSILCDIPLILLMFSPNDKPTICVGD 60
Query: 61 -SRMDKILERYERYSYAEKA 79
S ++ ++ +Y + + E+A
Sbjct: 61 HSSIEDVITKYAQQTPQERA 80
>Os02g0164450
Length = 286
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 2 GRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDS 61
GR ++++K IENK RQV FSKRR G+ KKA E+SVLC A VA + FSP G+ + + S
Sbjct: 23 GRQRIEMKLIENKEARQVCFSKRREGVFKKASELSVLCGARVAVVFFSPAGRPHCFGHPS 82
Query: 62 RMDKILERY 70
+ + +R+
Sbjct: 83 -VSAVADRF 90
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,126,282
Number of extensions: 177376
Number of successful extensions: 730
Number of sequences better than 1.0e-10: 52
Number of HSP's gapped: 696
Number of HSP's successfully gapped: 52
Length of query: 267
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 168
Effective length of database: 11,866,615
Effective search space: 1993591320
Effective search space used: 1993591320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)