BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0442600 Os10g0442600|AK058908
(203 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0442600 Similar to Cell division control protein 48 ho... 367 e-102
Os03g0151800 Similar to Cell division control protein 48 ho... 350 3e-97
AK119311 265 2e-71
AK109969 242 1e-64
Os08g0413000 Similar to Valosin-containing protein (Fragment) 197 3e-51
Os04g0498800 Similar to Cell division control protein 48 ho... 108 3e-24
Os06g0109400 AAA ATPase domain containing protein 105 3e-23
AK110388 104 6e-23
Os06g0607800 Similar to 26S proteasome regulatory complex s... 99 2e-21
Os02g0199900 Similar to 26S proteasome regulatory complex s... 98 4e-21
Os02g0649700 Peptidase M41, FtsH extracellular domain conta... 98 5e-21
Os06g0725900 Similar to Cell division protein ftsH homolog,... 98 5e-21
Os05g0519400 Similar to N-ethylmaleimide sensitive factor N... 97 9e-21
AK110513 96 1e-20
Os05g0376200 Similar to Cell division control protein 48 ho... 96 1e-20
Os02g0325100 Similar to 26S protease regulatory subunit 6B ... 96 2e-20
Os01g0842600 Similar to AAA-metalloprotease FtsH 94 5e-20
Os05g0458400 Similar to AAA-metalloprotease FtsH 92 2e-19
Os01g0683100 Similar to Katanin p60 ATPase-containing subun... 92 3e-19
Os06g0669400 Similar to FtsH protease (VAR2) (Zinc dependen... 91 6e-19
Os02g0784700 Similar to 26S protease regulatory subunit 7 (... 89 2e-18
AK110158 89 2e-18
Os06g0192600 26S proteasome regulatory particle triple-A AT... 89 2e-18
Os01g0574500 Peptidase M41, FtsH domain containing protein 89 2e-18
Os06g0600100 Similar to TAT-binding protein homolog (Fragment) 87 7e-18
Os02g0205300 Similar to TAT-binding protein homolog (Fragment) 87 8e-18
Os04g0617600 Similar to Cdc48 cell division control protein... 87 9e-18
Os07g0691800 Similar to 26S proteasome subunit 4-like prote... 87 1e-17
Os03g0298400 Similar to 26S proteasome subunit 4-like prote... 87 1e-17
Os01g0618800 AAA ATPase, central region domain containing p... 85 3e-17
Os04g0466100 Similar to Cell division protein FtsH-like pro... 85 3e-17
Os06g0173100 Similar to 26S protease regulatory subunit 6A ... 84 7e-17
Os02g0803700 Similar to 26S protease regulatory subunit 6A ... 84 7e-17
Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.... 84 1e-16
Os04g0284600 Similar to TAT-binding protein 1 (Fragment) 83 1e-16
AK119842 82 2e-16
Os09g0560200 Similar to 26S protease regulatory subunit 6B ... 81 5e-16
Os01g0673500 Similar to Katanin p60 ATPase-containing subun... 80 1e-15
Os07g0672500 SMAD/FHA domain containing protein 78 5e-15
Os11g0661400 AAA ATPase, central region domain containing p... 77 1e-14
Os09g0515100 Similar to Cdc48 cell division control protein... 76 2e-14
Os06g0225900 AAA ATPase domain containing protein 75 2e-14
Os03g0344700 AAA ATPase domain containing protein 75 2e-14
Os06g0229066 Twin-arginine translocation pathway signal dom... 70 1e-12
Os05g0584600 AAA ATPase domain containing protein 70 1e-12
Os06g0130000 Similar to Tobacco mosaic virus helicase domai... 69 3e-12
Os01g0623500 AAA ATPase domain containing protein 69 3e-12
Os01g0757400 Similar to Katanin p60 ATPase-containing subun... 69 3e-12
Os06g0714500 AAA ATPase domain containing protein 68 3e-12
Os01g0226400 AAA ATPase domain containing protein 67 1e-11
>Os10g0442600 Similar to Cell division control protein 48 homolog A (AtCDC48a)
Length = 203
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA
Sbjct: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEA 120
CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEA
Sbjct: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEA 120
Query: 121 MEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFERTE 179
MEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFERTE
Sbjct: 121 MEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFERTE 179
>Os03g0151800 Similar to Cell division control protein 48 homolog A (AtCDC48a)
Length = 809
Score = 350 bits (898), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/175 (96%), Positives = 173/175 (98%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD+QSRLQIFKA
Sbjct: 606 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDDQSRLQIFKA 665
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEA 120
CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIE E+R K+NPEA
Sbjct: 666 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIEMEKRRKDNPEA 725
Query: 121 MEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 175
MEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFG+EFRF
Sbjct: 726 MEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRF 780
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 70/105 (66%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
+++QLLT MDG+ A+ V ++GATNRP+ IDPAL R GR D+ I I +PDE RL++ +
Sbjct: 330 IVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI 389
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIE 105
+ +A+DVDL +AK T G+ GAD+ +C A IRE ++
Sbjct: 390 HTKNMKLAEDVDLEHIAKDTHGYVGADLAALCTEAALQCIREKMD 434
>AK119311
Length = 805
Score = 265 bits (676), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/177 (71%), Positives = 149/177 (84%), Gaps = 2/177 (1%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
V+NQ+LTEMDGM AKK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLPDE+SR IF+A
Sbjct: 598 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIFRA 657
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDI--ERERRSKENP 118
+RKSPVA DVDL +AK T GFSGAD+TE+CQRACK AIR++I+ +I ERER + +N
Sbjct: 658 NMRKSPVADDVDLAYIAKVTHGFSGADLTEVCQRACKLAIRQSIDAEIRRERERATNQNA 717
Query: 119 EAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 175
ME DE D + EI AHFEE+M++ARRSVSD DIRKY+ F+QTLQQSRGFG+ FRF
Sbjct: 718 AKMEMDEEDPVPEITRAHFEEAMRFARRSVSDNDIRKYEMFSQTLQQSRGFGTNFRF 774
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
+++QLLT MDG+ V ++ ATNRP+ ID AL R GR D+ I I +PD RL+I +
Sbjct: 322 IVSQLLTLMDGLKQSSHVIVMAATNRPNSIDGALRRFGRFDREIDIGIPDATGRLEILRI 381
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIE 105
+ +A DVDL +A T G GAD+ +C + IRE ++
Sbjct: 382 HTKNMKLADDVDLEQIAAETHGHVGADLASLCSESALQQIREKMD 426
>AK109969
Length = 882
Score = 242 bits (617), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/189 (63%), Positives = 141/189 (74%), Gaps = 14/189 (7%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
V+NQ+LTEMDG++++K VFIIGATNRPD IDPA+LRPGRLDQLIYIPLPDE SRL I KA
Sbjct: 657 VINQILTEMDGVSSRKNVFIIGATNRPDQIDPAILRPGRLDQLIYIPLPDEPSRLSILKA 716
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEA 120
L+KSP+A DVDL LAK+T GFSGAD+ EICQRA K AIRE+IE DI+RER EA
Sbjct: 717 TLKKSPIAADVDLTFLAKHTHGFSGADLAEICQRAAKLAIRESIEADIKRERERMATKEA 776
Query: 121 MEEDEVD--------------DIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQS 166
E EV + EI AHFEE+M++ARRSVSD DIR+Y+ FAQ LQ +
Sbjct: 777 NAEGEVKMEEDATAAAEEEEDPVPEITRAHFEEAMRFARRSVSDGDIRRYELFAQNLQSA 836
Query: 167 RGFGSEFRF 175
R FG+ FRF
Sbjct: 837 RSFGTSFRF 845
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
V++QLLT MDG+ A+ + ++ ATNRP+ IDPAL R GR D+ + I +PD RL+I +
Sbjct: 381 VVSQLLTLMDGLKARSNIVVMAATNRPNSIDPALRRFGRFDREVDIAIPDPTGRLEILRI 440
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIE 105
+ +A+DVDL +A T G+ G+D+ +C A IRE ++
Sbjct: 441 HTKNMKLAEDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMD 485
>Os08g0413000 Similar to Valosin-containing protein (Fragment)
Length = 848
Score = 197 bits (502), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/161 (61%), Positives = 121/161 (75%), Gaps = 11/161 (6%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
VLNQLLTEMDG+NAKKTVF+IGATNRPDIIDPA+LRPGRLDQLIYIPLPD SRL+IF+A
Sbjct: 612 VLNQLLTEMDGINAKKTVFVIGATNRPDIIDPAMLRPGRLDQLIYIPLPDASSRLEIFRA 671
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEA 120
LRK+P+++ VDL A+A T GFSGADI EICQRACK A+RE ++K + A
Sbjct: 672 NLRKAPMSRHVDLPAMAASTDGFSGADIKEICQRACKLAVREVVQKSTLVGKAL-----A 726
Query: 121 MEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQ 161
M AE+ HF+ +MK+AR+SVS+ D+ KY+ F
Sbjct: 727 MAG------AELTVDHFKSAMKHARKSVSELDVIKYEYFKH 761
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
V++QLLT MDG+ + V +IGATNRP+ +DPAL R GR D+ + I +PDE RL+I +
Sbjct: 335 VVSQLLTLMDGLRPRAQVIVIGATNRPNSLDPALRRFGRFDRELDIGVPDELGRLEILRI 394
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIE-KDIERE 111
+ P++ DVDL + K T GF G+D+ +C A IRE ++ DIE +
Sbjct: 395 HTKNMPLSDDVDLERVGKDTHGFVGSDLASLCSEAAMQCIREKLDIIDIEND 446
>Os04g0498800 Similar to Cell division control protein 48 homolog B (AtCDC48b)
Length = 578
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 89/157 (56%), Gaps = 21/157 (13%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
+L+ LLTEMDG+ + ++ ATNRP+ ID ALLRPGR D ++Y+P PD + R +I +
Sbjct: 430 LLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRI 489
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEA 120
RK P+ DVDL +A+ T+ F+GAD+ +C+ A A+RE++
Sbjct: 490 HTRKMPLGDDVDLWKVAERTELFTGADLEGLCREAGMAALRESLRS-------------- 535
Query: 121 MEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQ 157
E DDI HF+ +++ R S++ + + +Y
Sbjct: 536 -ERFVCDDI------HFQAALRSLRPSLTQSVVDEYS 565
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 1 VLNQLLTEMDGMNAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIF 58
++ QLLT MDG ++K + ++ + R D I+ AL RPGR D I + +P + R +I
Sbjct: 158 IVGQLLTLMDGKSSKLLPHLVVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEIL 217
Query: 59 KACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYA 99
K + + + VDL ++A G+ GAD+ +C+ A + A
Sbjct: 218 KLYTKNLHLGECVDLQSVAASCNGYVGADLQALCREAARRA 258
>Os06g0109400 AAA ATPase domain containing protein
Length = 770
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
+LNQLL E+DG +K VF+IGATNR D+ID A LRPGR + Y+PLP R+ I +A
Sbjct: 615 LLNQLLIELDGAGERKGVFVIGATNRIDVIDDAALRPGRFGKKHYVPLPGADERVSILRA 674
Query: 61 CLRKSPVAKDVDLNALAKY--TQGFSGADITEICQRACKYAIRENIEKDIERERRSKENP 118
R P++ VDL ALA+ + +GAD+ + A A+ E +E EN
Sbjct: 675 LARNKPISSSVDLGALARREECKNLTGADLASMVNEAAMAALEERLE--------FLENG 726
Query: 119 EAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQS 166
E+ + I+ HFE ++ + SVS+ R Y+A + S
Sbjct: 727 ESSMSSS----SAIELPHFERALAKMQPSVSEQQRRHYEALCKKYSAS 770
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 18 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLNALA 77
V +IGATNRPD +D AL RPGR D+ I + +PDE +R +I R + +DL +A
Sbjct: 345 VIVIGATNRPDAVDQALRRPGRFDREISLGVPDEYARKKILMMLTRNLRLEGQLDLLKIA 404
Query: 78 KYTQGFSGADITEICQRACKYAIRENIEK 106
+ T F GAD+ + +A A++ I++
Sbjct: 405 RATSSFVGADLKALVDKAGNLAMKRIIDR 433
>AK110388
Length = 957
Score = 104 bits (259), Expect = 6e-23, Method: Composition-based stats.
Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 13/171 (7%)
Query: 1 VLNQLLTEMDGMNAKKT-------VFIIGATNRPDIIDPALLRPGRLDQLIYI-PLPDEQ 52
++ QLL E+DG+ K+ VFIIGATNRPD++DP+LLRPGR D+L Y+ P +++
Sbjct: 778 IVAQLLAEVDGVGGTKSDGSASAQVFIIGATNRPDLLDPSLLRPGRFDRLCYLGPPQNKK 837
Query: 53 SRLQIFKACLRKSPVAKDVDLNALAKYTQG-FSGADITEICQRACKYAIRENIEK----D 107
++ KA RK +A DVDL A+ + + +SGAD +C A A+ E +E+
Sbjct: 838 EQVAAVKALTRKFKLAPDVDLAAVVEPLEPVYSGADYFALCSDAMMLAVNEAVERLKAQA 897
Query: 108 IERERRSKENPEAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQA 158
++ KE P A + I+ HFE + + SVS AD+++Y+
Sbjct: 898 FAKDGTVKEAPAAATVPAKQEPLLIEMRHFEAARAALKPSVSPADLKRYEG 948
>Os06g0607800 Similar to 26S proteasome regulatory complex subunit p42D
Length = 401
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 71/102 (69%), Gaps = 4/102 (3%)
Query: 2 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKAC 61
L +LL ++DG + V +I ATNRPD++DPALLRPGRLD+ I IPLP+EQSR+++ K
Sbjct: 265 LMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEVLK-- 322
Query: 62 LRKSPVAK--DVDLNALAKYTQGFSGADITEICQRACKYAIR 101
+ + +AK ++D A+ K +GF+GAD+ +C A AIR
Sbjct: 323 IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIR 364
>Os02g0199900 Similar to 26S proteasome regulatory complex subunit p42D
Length = 400
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 4/102 (3%)
Query: 2 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKAC 61
L +LL ++DG + V +I ATNRPD++DPALLRPGRLD+ I IPLP+EQ+R+++ K
Sbjct: 264 LMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLK-- 321
Query: 62 LRKSPVAK--DVDLNALAKYTQGFSGADITEICQRACKYAIR 101
+ + +AK ++D A+ K +GF+GAD+ +C A AIR
Sbjct: 322 IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIR 363
>Os02g0649700 Peptidase M41, FtsH extracellular domain containing protein
Length = 822
Score = 97.8 bits (242), Expect = 5e-21, Method: Composition-based stats.
Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 2 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKAC 61
LNQLLTEMDG + V ++GATNR D++DPAL RPGR D+++ + PD R I K
Sbjct: 470 LNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVH 529
Query: 62 LRKS--PVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIE 105
+ + P+ KDVDL+ +A T GF+GAD+ + A A R N E
Sbjct: 530 VSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAALLAGRSNKE 575
>Os06g0725900 Similar to Cell division protein ftsH homolog, chloroplast
precursor (EC 3.4.24.-) (DS9)
Length = 686
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Query: 2 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKAC 61
+NQLLTEMDG V ++ ATNRPD++D ALLRPGR D+ + + PD R++I +
Sbjct: 355 INQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVH 414
Query: 62 LRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRS 114
R +AKDVD +A+ T GF+GAD+ + A A R ++ K+I ++ S
Sbjct: 415 SRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDL-KEISKDEIS 466
>Os05g0519400 Similar to N-ethylmaleimide sensitive factor NSF (Fragment)
Length = 743
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 4/139 (2%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
++NQLLT++DG+ A V +IG TNR D++D ALLRPGRL+ I I LPDE RLQI +
Sbjct: 350 IVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQI 409
Query: 61 CLRK----SPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKE 116
K S ++ +V+L LA T+ +SGA++ + + A YA+ I D + +E
Sbjct: 410 HTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEE 469
Query: 117 NPEAMEEDEVDDIAEIKAA 135
+ + +D V+ + EI A
Sbjct: 470 SIKVTMDDFVNALHEITPA 488
>AK110513
Length = 885
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
LNQLL EMDG N V ++ TNRPDI+D AL+RPGR D+ I + PD + R QIF+
Sbjct: 495 TLNQLLVEMDGFNTTSGVVVLAGTNRPDILDKALMRPGRFDRTISVDTPDIKGREQIFRV 554
Query: 61 CLRKSPVAKDVDLNA--LAKYTQGFSGADITEICQRACKYAIR 101
L K + K ++ + LA T GFSGADI +C A A R
Sbjct: 555 HLAKLRLEKALEHYSERLAALTPGFSGADIANVCNEAALVAAR 597
>Os05g0376200 Similar to Cell division control protein 48 homolog B (AtCDC48b)
Length = 391
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
+L+ LLTEMDG+ + ++ ATNRP+ ID ALLRPGR D ++Y+P PD + R +I +
Sbjct: 264 LLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRI 323
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADI 88
RK P+ DVDL +A+ T+ F+GAD+
Sbjct: 324 HTRKMPLGDDVDLWKVAERTELFTGADL 351
>Os02g0325100 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7)
Length = 419
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
+L +LL +MDG + V +I ATNR D +DPALLRPGRLD+ I PLPD + + +F+
Sbjct: 289 ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV 348
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIREN----IEKDIERERRSK- 115
C K ++ +VDL S ADI ICQ A +A+R+N + KD E+ R+
Sbjct: 349 CTAKMNLSDEVDLEDYVSRPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 408
Query: 116 ENPEA 120
+ PE
Sbjct: 409 KKPET 413
>Os01g0842600 Similar to AAA-metalloprotease FtsH
Length = 802
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
LNQLL EMDG V ++ TNRPDI+D ALLRPGR D+ I I PD + R QIF+
Sbjct: 443 TLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRI 502
Query: 61 CLRKSPVAKDVDLNA--LAKYTQGFSGADITEICQRACKYAIR 101
L+K + K+ + LA T GF+GADI +C A A R
Sbjct: 503 YLKKLKLDKEPSFYSQRLAALTPGFAGADIANVCNEAALIAAR 545
>Os05g0458400 Similar to AAA-metalloprotease FtsH
Length = 822
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
LNQLL EMDG V ++ TNRPDI+D ALLRPGR D+ I I PD + R QIF+
Sbjct: 458 TLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRI 517
Query: 61 CLRKSPVAKDVDLNA--LAKYTQGFSGADITEICQRACKYAIR 101
L+K + + + LA T GF+GADI +C A A R
Sbjct: 518 YLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAAR 560
>Os01g0683100 Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3)
(Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
(Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
(AtAAA1)
Length = 519
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 95/167 (56%), Gaps = 17/167 (10%)
Query: 1 VLNQLLTEMDGMNAKKT--------VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQ 52
V ++LL ++DG+N T V ++ ATN P ID AL R RL++ IYIPLP+ +
Sbjct: 355 VKSELLVQIDGVNNSSTTEDGQPKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPNFE 412
Query: 53 SRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERER 112
SR + L+ VA DVD++ +A+ T+G+SG D+T +C+ A +R I
Sbjct: 413 SRKALININLKTVEVATDVDIDEVARRTEGYSGDDLTNVCRDASMNGMRRKIAG------ 466
Query: 113 RSKENPEAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAF 159
++++ + M +DE+ + FEE++ ++SVS ADI K++ +
Sbjct: 467 KTRDEIKNMSKDEISK-DPVAMCDFEEALAKVQKSVSPADIEKHEKW 512
>Os06g0669400 Similar to FtsH protease (VAR2) (Zinc dependent protease)
Length = 609
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 57/100 (57%)
Query: 2 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKAC 61
LNQLLTEMDG + +I ATNR DI+D ALLRPGR D+ + + +PD + R +I K
Sbjct: 270 LNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 329
Query: 62 LRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIR 101
DV L +A T GFSGAD+ + A A R
Sbjct: 330 GSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGR 369
>Os02g0784700 Similar to 26S protease regulatory subunit 7 (26S proteasome
subunit 7) (26S proteasome AAA-ATPase subunit RPT1)
(Regulatory particle triple-A ATPase subunit 1)
Length = 235
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%)
Query: 4 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLR 63
+++ ++DG +A+ + ++ ATNRPD +DPALLRPGRLD+ + LPD + R QIFK R
Sbjct: 103 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTR 162
Query: 64 KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIR 101
+D+ LA+ +GADI +C A YAIR
Sbjct: 163 TMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 200
>AK110158
Length = 856
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 21/153 (13%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
LN+LL +MDG ++ V ++ TNRPD++D AL+RPGR D+ I I PD R IF
Sbjct: 491 TLNELLVQMDGFGTEEHVVVLAGTNRPDVLDAALMRPGRFDRHIAIDRPDISGRKDIFLV 550
Query: 61 CLR----KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIR--------ENIEKDI 108
L+ S +D+ L+ T GFSGAD+ +C A A R + E+ I
Sbjct: 551 HLKPLTLHSSTDRDLLAEKLSTLTPGFSGADVANVCNEAALIAARGGAESIEEHHFEQAI 610
Query: 109 ER-----ERRSKENPEAMEEDEVDDIAEIKAAH 136
ER ER+S+ + +E +A +A H
Sbjct: 611 ERVIAGLERKSR----VLSPEEKKTVAYHEAGH 639
>Os06g0192600 26S proteasome regulatory particle triple-A ATPase subunit1 (26S
protease regulatory subunit 7)
Length = 426
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%)
Query: 4 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLR 63
+++ ++DG +A+ + ++ ATNRPD +DPALLRPGRLD+ + LPD + R QIFK R
Sbjct: 294 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTR 353
Query: 64 KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIR 101
+D+ LA+ +GADI +C A YAIR
Sbjct: 354 TMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 391
>Os01g0574500 Peptidase M41, FtsH domain containing protein
Length = 715
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 60/96 (62%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
LNQLL E+DG + + +I ATN P+ +D AL+RPGR D+ I +P PD + R QI ++
Sbjct: 349 TLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILES 408
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRAC 96
+ K + DVDL +A+ T GFSGAD+ + A
Sbjct: 409 HMSKVLKSDDVDLMIIARGTPGFSGADLANLVNVAA 444
>Os06g0600100 Similar to TAT-binding protein homolog (Fragment)
Length = 423
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 4 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLR 63
+LL ++DG A + ++ ATNR DI+D ALLRPGR+D+ I P P+E SR I K R
Sbjct: 292 ELLNQLDGFEASNKIKVLMATNRMDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSR 351
Query: 64 KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 102
K + + +DL +A+ G SGA++ +C A +A+RE
Sbjct: 352 KMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 390
>Os02g0205300 Similar to TAT-binding protein homolog (Fragment)
Length = 424
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 4 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLR 63
+LL ++DG A + ++ ATNR DI+D ALLRPGR+D+ I P P+E SR I K R
Sbjct: 293 ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSR 352
Query: 64 KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 102
K + + +DL +A+ G SGA++ +C A +A+RE
Sbjct: 353 KMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 391
>Os04g0617600 Similar to Cdc48 cell division control protein 48, AAA family
Length = 940
Score = 87.0 bits (214), Expect = 9e-18, Method: Composition-based stats.
Identities = 57/167 (34%), Positives = 96/167 (57%), Gaps = 11/167 (6%)
Query: 1 VLNQLLTEMDGM-NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL-PDEQSRLQIF 58
V++QLL E+DG+ + + +FIIGATNRPD++D ALLRPGR D+L+Y+ + D R +I
Sbjct: 778 VVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYVGVNSDASYRERIL 837
Query: 59 KACLRKSPVAKDVDLNALAKYT-QGFSGADITEICQRACKYAIRENIEKDIERERRSKEN 117
KA RK + ++V L ++A+ F+GADI +C A +A + N+ K +E +
Sbjct: 838 KAQTRKYKLHENVSLLSIAQQCPPNFTGADIYALCADAWYHAAK-NLAKTLE------AD 890
Query: 118 PEAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQ 164
P E DD+ ++ F + S+S +++ Y+ + ++
Sbjct: 891 PSRTSEASADDVI-VEINDFMTVLGDITPSLSIEELQNYEQLRKKIE 936
>Os07g0691800 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 448
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 63/99 (63%)
Query: 4 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLR 63
+LL ++DG +++ V +I ATNR + +DPALLRPGR+D+ I PLPD ++R +IF+
Sbjct: 319 ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTS 378
Query: 64 KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 102
K +A DV+L FSGADI IC A A+RE
Sbjct: 379 KMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 417
>Os03g0298400 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 450
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 63/99 (63%)
Query: 4 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLR 63
+LL ++DG +++ V +I ATNR + +DPALLRPGR+D+ I PLPD ++R +IF+
Sbjct: 321 ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTS 380
Query: 64 KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 102
K +A DV+L FSGADI IC A A+RE
Sbjct: 381 KMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 419
>Os01g0618800 AAA ATPase, central region domain containing protein
Length = 304
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 56/86 (65%)
Query: 21 IGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLNALAKYT 80
+ ATN PDI+DPAL RPGR D+ I +P PD + R +I + L+ PV+ DVD+NA+A+ T
Sbjct: 1 MAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPVSSDVDVNAIARST 60
Query: 81 QGFSGADITEICQRACKYAIRENIEK 106
GF+GAD+ + A A E +K
Sbjct: 61 PGFNGADLANLVNIAAIKAAVEGADK 86
>Os04g0466100 Similar to Cell division protein FtsH-like protein
Length = 174
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
LNQLLTEMDG ++ V ++ ATNRP +DPAL RPGR + + + +PD + R I
Sbjct: 6 TLNQLLTEMDGFDSDMKVIVMAATNRPKALDPALCRPGRFSRKVLVGVPDLEGRRNILAV 65
Query: 61 CLRKSPVAKDVDL--NALAKYTQGFSGADITEICQRACKYA--------IRENIEKDIER 110
LR P+ +D ++ + +A T G GAD+ I A A RE+I IER
Sbjct: 66 HLRDVPLEEDPEIICDLVASLTPGLVGADLANIVNEAALLAARRGGNTVAREDIMDAIER 125
Query: 111 ER 112
E+
Sbjct: 126 EK 127
>Os06g0173100 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
(LEMA-1)
Length = 429
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%)
Query: 4 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLR 63
+LL ++DG ++ + + +I ATNR DI+DPAL+R GRLD+ I P P E++R +I + R
Sbjct: 302 ELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSR 361
Query: 64 KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIR 101
K V DV+ LA+ T F+GA + +C A A+R
Sbjct: 362 KMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 399
>Os02g0803700 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1)
Length = 429
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%)
Query: 4 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLR 63
+LL ++DG ++ + + +I ATNR DI+DPAL+R GRLD+ I P P E++R +I + R
Sbjct: 302 ELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSR 361
Query: 64 KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIR 101
K V DV+ LA+ T F+GA + +C A A+R
Sbjct: 362 KMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 399
>Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.24.-)
Length = 709
Score = 83.6 bits (205), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 59/94 (62%)
Query: 2 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKAC 61
LNQLL E+DG + + +I ATN P +D AL+RPGR D+ I +P PD + R QI ++
Sbjct: 343 LNQLLVELDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEGRRQILESH 402
Query: 62 LRKSPVAKDVDLNALAKYTQGFSGADITEICQRA 95
+ K + DVDL +A+ T GFSGAD+ + A
Sbjct: 403 MLKVLKSDDVDLMIIARGTPGFSGADLANLVNVA 436
>Os04g0284600 Similar to TAT-binding protein 1 (Fragment)
Length = 357
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
Query: 4 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLR 63
+LL ++DG+ + +++ +I ATNRP+++DPA LR GRLDQ I P P EQ+R++I + R
Sbjct: 237 ELLNQLDGVGSYESIKVIAATNRPEVLDPAFLRSGRLDQKIEFPHPSEQARVRILEIHSR 296
Query: 64 KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEAMEE 123
K DV+ LA T F+GA + +C A A ++ E E
Sbjct: 297 KMDKNPDVNFEELACCTDDFNGAQLKAVCFEASMLAFH-------------RDATEVRHE 343
Query: 124 DEVDDIAEIKAAHF 137
D V IA++K ++
Sbjct: 344 DFVRAIAQVKDGNY 357
>AK119842
Length = 769
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 2 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKAC 61
LNQLL ++DG + V I ATN P+++D AL RPGR D+ + + LPD RL I K
Sbjct: 411 LNQLLNDLDGFDQSTGVIFIAATNHPELLDSALTRPGRFDRHVQVELPDVSGRLAILKYH 470
Query: 62 LRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIR 101
+K + ++DL+ +A+ T GFSGA++ + A AIR
Sbjct: 471 TKKIRLNPEIDLSTIARGTPGFSGAELENLANSA---AIR 507
>Os09g0560200 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7).
Splice isoform 2
Length = 448
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD--EQSRLQIF 58
VL +LLT+MDG + V +I ATNR D +DPALLRPGRLD+ + P+ E+ RL +
Sbjct: 313 VLIELLTQMDGFDESTNVRVIMATNRADDLDPALLRPGRLDRKVEFTAPESPEEKRL-VL 371
Query: 59 KACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 102
+ C + DVDL+ALA S A+I +C++A A+R+
Sbjct: 372 QTCTAGMSLDGDVDLDALAARRDKLSAAEIAAVCRKAGMQAVRD 415
>Os01g0673500 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 370
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 3 NQLLTEMDGMN-AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKAC 61
+LL +MDG+ VF++ ATN P +D A+LR RL++ I +PLP++++R +F+
Sbjct: 213 TELLIQMDGLTKTDDLVFVLAATNLPWELDAAMLR--RLEKRILVPLPEQEARHAMFEEL 270
Query: 62 LRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEAM 121
L P ++ + L + T+G+SG+DI +C+ A +R + E R +E P
Sbjct: 271 LPSVPGTMNIPYDVLVEKTEGYSGSDIRLVCKEAAMQPLRRLMSV---LEGRQEEVP--- 324
Query: 122 EEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQ 161
EDE+ ++ + E +++ R S + + +Y+ F Q
Sbjct: 325 -EDELPEVGPVTTEDIELALRNTRPS-AHLHVHRYEKFNQ 362
>Os07g0672500 SMAD/FHA domain containing protein
Length = 1081
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Query: 3 NQLLTEMDGMNAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
N+ + DG+ K + V ++ ATNRP +D A++R RL + + + LPD +R +I
Sbjct: 903 NEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDASNRKKILSV 960
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKE 116
L K +A DVDL ALA T G+SG+D+ +C A IRE +E++ ++ER S E
Sbjct: 961 ILAKEDLADDVDLEALANLTDGYSGSDMKNLCVTAAHCPIREILERE-KKERASAE 1015
>Os11g0661400 AAA ATPase, central region domain containing protein
Length = 241
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 3 NQLLTEMDGMNAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
N+ + DG+ K + V ++GATNRP +D A++R R + + + LPD +R +I K
Sbjct: 63 NEFMVNWDGLRTKDKERVLVLGATNRPFDLDEAVIR--RFPRRLMVNLPDASNREKILKV 120
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 102
L K +A +D+++LA T G+SG+D+ +C A Y IRE
Sbjct: 121 ILAKEELAPGIDMDSLATMTDGYSGSDLKNLCVTAAHYPIRE 162
>Os09g0515100 Similar to Cdc48 cell division control protein 48, AAA family
Length = 1198
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 1 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
+++ LL MDG++++ V +IGATNR D ID AL RPGR D+ + PLP ++R +I
Sbjct: 489 IVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFFFPLPGYEARAEILDI 548
Query: 61 CLR--KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 102
R K P K++ LA G+ GAD+ +C A A RE
Sbjct: 549 HTRKWKDPPPKELK-TELAASCVGYCGADLKALCTEAAIRAFRE 591
>Os06g0225900 AAA ATPase domain containing protein
Length = 271
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 3 NQLLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
N+ + DG+ +K+ + I+GATNRP +D A++R RL + IY+ LPD Q+R++I K
Sbjct: 105 NEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDSQNRMKILKI 162
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKD 107
L K + D + LA T+G+SG+D+ +C A + E +E++
Sbjct: 163 LLAKENLESDFRFDELANATEGYSGSDLKNLCIAAAYRPVHELLEEE 209
>Os03g0344700 AAA ATPase domain containing protein
Length = 666
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 3 NQLLTEMDGMNAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
N+ + DG+ K + V ++ ATNRP +D A++R RL + + + LPD +R +I
Sbjct: 488 NEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDASNRRKILSV 545
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKD-IERERRSKENPE 119
L K +A DVDL A+A T+G+SG+D+ +C A I++ +EK+ E+ EN
Sbjct: 546 ILAKEDLADDVDLEAVASLTEGYSGSDLKNLCITAAHLPIKDILEKEKKEKALAEAENRP 605
Query: 120 AMEEDEVDDIAEIKAAHFEESMKYARRSVS 149
+ +D+ ++ + F+ + + SVS
Sbjct: 606 LPQSFSSNDVRALRLSDFKHAHEQVCASVS 635
>Os06g0229066 Twin-arginine translocation pathway signal domain containing
protein
Length = 486
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 2 LNQLLTEMDGMNAKKTVFI-IGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
LNQLLTEMDG + I ATNRP+I+D ALLRPGR D+ + + LPD + R +I
Sbjct: 339 LNQLLTEMDGFGGGDGGVVVIAATNRPEILDAALLRPGRFDRRVSVGLPDVRGREEILLV 398
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIREN 103
+ V L +A T GFSGAD+ + A A R
Sbjct: 399 HGANKRLDPGVSLAVVAMRTPGFSGADLANLMNEAAILAGRRG 441
>Os05g0584600 AAA ATPase domain containing protein
Length = 855
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 3 NQLLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
N+ ++ DG+ +K + ++ ATNRP +D A++R R ++ I + LP SR I +
Sbjct: 624 NEFMSHWDGLLSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTLDSRELILRT 681
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 102
L K VA+D+D LA T+G+SG+D+ +C A +RE
Sbjct: 682 LLSKEKVAEDIDYKELATMTEGYSGSDLKNLCVTAAYRPVRE 723
>Os06g0130000 Similar to Tobacco mosaic virus helicase domain-binding protein
(Fragment)
Length = 487
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 3 NQLLTEMDGM--NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
++ L + DG+ N V +IGATN+P +D A+LR RL + IY+PLPD R + K
Sbjct: 336 SEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRLLLKT 393
Query: 61 CLR-KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 102
L+ +S DL LA T+G+SG+D+ +C+ A IRE
Sbjct: 394 QLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRE 436
>Os01g0623500 AAA ATPase domain containing protein
Length = 812
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 1 VLNQLLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIF 58
V N+ + DG+ +K + ++ ATNRP +D A++R R + I + LP +SR I
Sbjct: 590 VKNEFMAHWDGLLSKSNERILVLAATNRPFDLDDAVIR--RFEHRIMVGLPTLESRELIL 647
Query: 59 KACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKEN- 117
K L K V +++D LAK T+G++ +D+ IC A + +RE ++K E+ + KE
Sbjct: 648 KTLLSKETV-ENIDFKELAKMTEGYTSSDLKNICVTAAYHPVRELLQK--EKNKVKKETA 704
Query: 118 PEAMEE 123
PE +E
Sbjct: 705 PETKQE 710
>Os01g0757400 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 386
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 3 NQLLTEMDGMN-AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKAC 61
+LL +MDG+ VF++ ATN P +D A+LR RL++ I +PLP+ ++R +F+
Sbjct: 225 TELLIQMDGLTKTNDLVFVLAATNLPWELDAAMLR--RLEKRILVPLPEAEARHAMFEEL 282
Query: 62 LRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIR 101
L + +V + L + T+G+SG+DI +C+ A +R
Sbjct: 283 LPSTTSKLEVPYDTLVEKTEGYSGSDIRLVCKEAAMQPLR 322
>Os06g0714500 AAA ATPase domain containing protein
Length = 393
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Query: 3 NQLLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
+ ++ DG + V ++ ATNRP +D A+LR R Q+ I +P + R +I +
Sbjct: 207 TEFMSLWDGFTTDQNARVMVLAATNRPSELDEAILR--RFTQIFEIGIPVQSERSKILRV 264
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEA 120
L+ V +++ + +A +GF+G+DI E+C++A Y IRE + E++ R + P
Sbjct: 265 VLKGENVEPNINYDYIAGLCEGFTGSDILELCKQAAFYPIRELLNN--EKDGRKADKPRP 322
Query: 121 MEEDEVD 127
+ + +++
Sbjct: 323 LRQSDLE 329
>Os01g0226400 AAA ATPase domain containing protein
Length = 840
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 3 NQLLTEMDGMNAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
N+ +T DG+ ++ + + ++ ATNRP +D A++R R ++ I + LP +SR I ++
Sbjct: 655 NEFMTHWDGLLSRPDQKILVLAATNRPFDLDEAIIR--RFERRIMVGLPSLESRELILRS 712
Query: 61 CLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIE 105
L K V +D LA T+G+SG+D+ +C A +RE I+
Sbjct: 713 LLSKEKVDGGLDYKELATMTEGYSGSDLKNLCTTAAYRPVRELIQ 757
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,509,739
Number of extensions: 214528
Number of successful extensions: 1015
Number of sequences better than 1.0e-10: 50
Number of HSP's gapped: 993
Number of HSP's successfully gapped: 56
Length of query: 203
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 107
Effective length of database: 12,023,257
Effective search space: 1286488499
Effective search space used: 1286488499
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 153 (63.5 bits)