BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0223300 Os06g0223300|AK111776
(360 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0223300 Similar to TDR8 protein 752 0.0
Os08g0494100 234 1e-61
Os01g0886200 Similar to AGAMOUS homolog 98 1e-20
Os12g0207000 Transcription factor 97 2e-20
Os07g0605200 MADS box transcription factor 18 (OsMADS18) (M... 96 3e-20
Os07g0108900 MADS15 protein 96 5e-20
Os11g0658700 Transcription factor, MADS-box domain containi... 94 2e-19
Os01g0201700 Similar to MADS box protein 94 2e-19
Os09g0507200 MADS box protein 93 3e-19
Os08g0531700 Similar to Developmental protein SEPALLATA2 (A... 93 3e-19
Os02g0682200 Similar to MADS box protein 92 4e-19
Os05g0203800 Similar to MADS box protein 92 5e-19
Os06g0162800 MADS box protein 92 7e-19
Os03g0215400 Box protein (MADS box protein MADS1) 91 1e-18
Os04g0580700 MADS box transcription factor MADS17 90 2e-18
Os03g0753100 Transcription factor, MADS-box domain containi... 90 2e-18
AF109153 90 3e-18
Os02g0731200 Transcription factor MADS57 90 3e-18
AF141965 89 7e-18
Os10g0536100 Transcription factor MADS56 88 8e-18
Os03g0752800 MADS14 protein 88 1e-17
AK069331 87 2e-17
Os03g0122600 Transcription factor, MADS-box domain containi... 86 3e-17
Os02g0761000 Similar to Transcription factor MADS55 86 5e-17
Os12g0501700 Transcription factor, MADS-box domain containi... 85 6e-17
Os04g0304400 Similar to MADS-box protein AGL16-II 84 1e-16
Os08g0431900 Transcription factor MADS23 82 7e-16
Os06g0712700 MADS-box protein SPW1 82 9e-16
Os02g0579600 Transcription factor MADS27 80 2e-15
Os01g0883100 Similar to PISTILLATA-like MADS box protein 80 3e-15
Os04g0614100 Transcription factor, MADS-box domain containi... 80 3e-15
Os01g0922800 Similar to MADS-box protein PTM5 79 6e-15
Os05g0423400 Similar to PISTILLATA-like MADS box protein 79 7e-15
Os02g0170300 Similar to MADS box protein ZMM17 78 9e-15
Os06g0108100 78 9e-15
Os08g0112700 Similar to TAGL12 transcription factor 78 1e-14
Os04g0461300 Transcription factor, MADS-box domain containi... 77 2e-14
Os01g0975800 77 2e-14
Os12g0206800 Transcription factor, MADS-box domain containi... 76 4e-14
Os03g0186600 Transcription factor, MADS-box domain containi... 75 5e-14
Os08g0531900 Similar to MADS box transcription factor-like ... 75 9e-14
Os09g0116800 74 1e-13
Os01g0726400 Transcription factor, MADS-box domain containi... 73 4e-13
Os06g0503500 72 8e-13
Os06g0347700 71 1e-12
Os06g0217300 Similar to Transcription factor MADS55 70 2e-12
Os02g0104100 70 3e-12
Os06g0667200 MADS30 70 3e-12
Os12g0407000 69 5e-12
Os05g0203600 Transcription factor, MADS-box domain containi... 69 5e-12
>Os06g0223300 Similar to TDR8 protein
Length = 360
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR
Sbjct: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
Query: 61 RRIEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESDVTEDLTNTSSKAPVNSNIEE 120
RRIEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESDVTEDLTNTSSKAPVNSNIEE
Sbjct: 61 RRIEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESDVTEDLTNTSSKAPVNSNIEE 120
Query: 121 LQQEIRRCQHQMQLTEEQLRMFEPDPARSASMEDVEASEKFIAGILSRVEERKRYLLCSM 180
LQQEIRRCQHQMQLTEEQLRMFEPDPARSASMEDVEASEKFIAGILSRVEERKRYLLCSM
Sbjct: 121 LQQEIRRCQHQMQLTEEQLRMFEPDPARSASMEDVEASEKFIAGILSRVEERKRYLLCSM 180
Query: 181 GSFDVTASTSAMQHLYLPQQHQHGDITDNGFGSDEVASWVSEGMPPTTSSVASIFAGTSD 240
GSFDVTASTSAMQHLYLPQQHQHGDITDNGFGSDEVASWVSEGMPPTTSSVASIFAGTSD
Sbjct: 181 GSFDVTASTSAMQHLYLPQQHQHGDITDNGFGSDEVASWVSEGMPPTTSSVASIFAGTSD 240
Query: 241 SMMSFRDQAVYDTMRQDACVDQTVVPEMGMCHVDQQNQSDDWQAYTSAEFLNALIPPTPF 300
SMMSFRDQAVYDTMRQDACVDQTVVPEMGMCHVDQQNQSDDWQAYTSAEFLNALIPPTPF
Sbjct: 241 SMMSFRDQAVYDTMRQDACVDQTVVPEMGMCHVDQQNQSDDWQAYTSAEFLNALIPPTPF 300
Query: 301 PLDDEDTMGPMLASSPLLMPGIHDQQPPVEDMATAGCSQAPANDGNGLYAAEDIAPVNVG 360
PLDDEDTMGPMLASSPLLMPGIHDQQPPVEDMATAGCSQAPANDGNGLYAAEDIAPVNVG
Sbjct: 301 PLDDEDTMGPMLASSPLLMPGIHDQQPPVEDMATAGCSQAPANDGNGLYAAEDIAPVNVG 360
>Os08g0494100
Length = 337
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 194/370 (52%), Gaps = 72/370 (19%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGRVKL IKRIEN NRQVTFSKRRNGLIKKAYELSVLCDID+ALLMFSPSGRLSHFSGR
Sbjct: 1 MGRVKLPIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDVALLMFSPSGRLSHFSGR 60
Query: 61 RRIEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESDVTEDLTNTSSKAPVNSNIEE 120
R +EDV+ RY+NL E DRG IQNR EE
Sbjct: 61 RGVEDVILRYMNLSEHDRGEAIQNR---------------------------------EE 87
Query: 121 LQQEIRRCQHQMQLTEEQLRMFEPDPARSASMEDVEASEKFIAGILSRVEERKRYLLCS- 179
+QQEI Q Q+Q+TE++LRMFEPDPA + +V+ EK++ +L+RV ERK LL S
Sbjct: 88 IQQEIYSSQQQLQITEDRLRMFEPDPAAFGTSSEVDGCEKYLMELLTRVVERKNNLLSSH 147
Query: 180 MGSFDVTASTSAMQHLYLPQQHQHGDITDNGFGSDEVASWVSEGMPPTTSSVASIFAGTS 239
M FD A+T+AMQ Q + FG D A W +G + S S
Sbjct: 148 MAPFD--ATTAAMQGADGTQMYVSQADGLATFGGD-AAMWGPDGGADPGHPMFS----AS 200
Query: 240 DSMMSFRDQAVYDTMRQDA---------------------CVDQTVVPEMGMCHVDQQNQ 278
D ++ RD VYD Q A CVD V
Sbjct: 201 DPLIYLRDHDVYDANSQVAGLHGGDPCAAGGAAAAAAAVGCVDDDVA-------GGHAAA 253
Query: 279 SDDW-QAYTSAEFLNALIPPTPFPLDDEDTMGPMLASSPLLMPGIHDQQPPVEDMATAGC 337
+D W QAYT E L+ LIP TPFPL +GP + + Q PVE +TA C
Sbjct: 254 ADAWRQAYTCTELLSTLIPTTPFPLMPH-CLGPEDQYLSMEHGMVAAAQEPVE-ASTASC 311
Query: 338 SQAPANDGNG 347
S P+++ +G
Sbjct: 312 SYVPSDENSG 321
>Os01g0886200 Similar to AGAMOUS homolog
Length = 265
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 35/182 (19%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K++IKRIEN +RQVTF KRRNGL+KKAYEL++LCD +IAL++FS GRL FS
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 60
Query: 61 RRIEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESDVTEDLTNTSSKAP---VNSN 117
+ RY S TS AP VNS+
Sbjct: 61 NSTRSTIERYKKASAS-------------------------------TSGSAPVIDVNSH 89
Query: 118 IEELQQEIRRCQHQMQLTEEQLRMFEPDPARSASMEDVEASEKFIAGILSRVEERKRYLL 177
+ QQE + +HQ+Q + R + + + +++++ E + +SR+ +K LL
Sbjct: 90 -QYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELL 148
Query: 178 CS 179
S
Sbjct: 149 FS 150
>Os12g0207000 Transcription factor
Length = 270
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 30/180 (16%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR +++IKRIEN +RQVTF KRRNGL+KKAYELSVLCD ++AL++FS GRL +S
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
Query: 61 RRIEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESDVTEDLTNTSSKAPVNSNIEE 120
++ + RY ++ G+ TS + N ++
Sbjct: 61 NNVKATIDRY---KKAHACGS--------------------------TSGAPLIEVNAQQ 91
Query: 121 -LQQEIRRCQHQMQLTEEQLRMFEPDPARSASMEDVEASEKFIAGILSRVEERKRYLLCS 179
QQE + +HQ+Q+ + + D + S+++++ E + +S++ RK LL S
Sbjct: 92 YYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLAS 151
>Os07g0605200 MADS box transcription factor 18 (OsMADS18) (MADS box protein 2)
(MADS box protein 28) (FDRMADS7)
Length = 249
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 55/70 (78%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR +Q++RIEN NRQVTFSKRRNGL+KKA+E+SVLCD D+AL++FS G+L FS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 61 RRIEDVLTRY 70
+E +L RY
Sbjct: 61 SSMEGILERY 70
>Os07g0108900 MADS15 protein
Length = 267
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 57/70 (81%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K+Q+KRIEN NRQVTFSKRRNGL+KKA+E+SVLCD ++A ++FSP G+L ++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 61 RRIEDVLTRY 70
R++ +L RY
Sbjct: 61 SRMDKILERY 70
>Os11g0658700 Transcription factor, MADS-box domain containing protein
Length = 385
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSG- 59
MGRVKL+IK++EN R VT+SKRR+G++KKA ELS+LCDI + LLMFSP+ + + G
Sbjct: 1 MGRVKLKIKKLENSSGRHVTYSKRRSGILKKAKELSILCDIPLILLMFSPNDKPTICVGD 60
Query: 60 RRRIEDVLTRYI-NLPESDRGGTIQNREYLINMLTQLKCESDVTEDLTNTSSKAP--VNS 116
IEDV+T+Y P+ +++ E L +L + ++ + L + + S
Sbjct: 61 HSSIEDVITKYAQQTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGSGGQTVEMLIKS 120
Query: 117 NI-EELQQEIRRCQHQMQLTEEQLRMFEPDPARSASMEDVEASEKFIAGILSRVEERK 173
+ +EL + Q QM E++L + DP + +++ + A E+ + L+R+ K
Sbjct: 121 IVWQELSSHLGALQCQMADVEKRLSYWS-DPEKVENIDHIRAMEQSLKESLNRIRIHK 177
>Os01g0201700 Similar to MADS box protein
Length = 154
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K++IKRIEN NRQVTF KRRNGL+KKAYELSVLCD ++AL++FS GRL ++
Sbjct: 41 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN- 99
Query: 61 RRIEDVLTRY 70
++ + RY
Sbjct: 100 NSVKSTVERY 109
>Os09g0507200 MADS box protein
Length = 248
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 59/86 (68%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR ++++KRIEN NRQVTF+KRRNGL+KKAYELSVLCD ++AL++FS G+L F
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
Query: 61 RRIEDVLTRYINLPESDRGGTIQNRE 86
+ + L RY IQN+E
Sbjct: 61 QSMTRTLERYQKFSYGGPDTAIQNKE 86
>Os08g0531700 Similar to Developmental protein SEPALLATA2 (Agamous-like MADS box
protein AGL4)
Length = 310
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 60/86 (69%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR ++++KRIEN NRQVTF+KRRNGL+KKAYELSVLCD ++AL++FS G+L F
Sbjct: 27 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 86
Query: 61 RRIEDVLTRYINLPESDRGGTIQNRE 86
+ + L +Y + +QNRE
Sbjct: 87 QSMTKTLEKYQKCSYAGPETAVQNRE 112
>Os02g0682200 Similar to MADS box protein
Length = 250
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR ++++KRIEN NRQVTFSKRRNGL+KKAYELSVLCD ++AL++FS G+L F G
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 59
Query: 61 RRIEDVLTRY 70
I L RY
Sbjct: 60 AGITKTLERY 69
>Os05g0203800 Similar to MADS box protein
Length = 233
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 31/177 (17%)
Query: 3 RVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGRRR 62
R K++IKRIEN NRQVTF KRR+GL+KKAYELSVLCD ++AL++FS GRL +S
Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN-NS 103
Query: 63 IEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESDVTEDLTNTSSKAPVNSNIEELQ 122
+++ + RY D +N S+ A +N+ + Q
Sbjct: 104 VKETIERY----------------------------KKANSDTSNASTVAEINA--QHYQ 133
Query: 123 QEIRRCQHQMQLTEEQLRMFEPDPARSASMEDVEASEKFIAGILSRVEERKRYLLCS 179
QE + + Q+ + R D + + +++ E + L ++ RK LLC+
Sbjct: 134 QEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCA 190
>Os06g0162800 MADS box protein
Length = 225
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 54/70 (77%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K+++KRIEN +RQVTF+KRRNGL+KKAYELSVLCD ++AL++FS GRL FS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 RRIEDVLTRY 70
+ L RY
Sbjct: 61 SCMYKTLERY 70
>Os03g0215400 Box protein (MADS box protein MADS1)
Length = 257
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 88/141 (62%), Gaps = 5/141 (3%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K+++KRIEN +RQVTF+KRRNGL+KKAYELS+LCD ++AL++FS GRL FS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 RRIEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESDVTEDLTNTSSKAPVNSNIEE 120
+ L RY + + + E IN LK ++ V + T+ + + ++
Sbjct: 61 SCMYKTLERYRSCNYNSQDAAAPENE--INYQEYLKLKTRV--EFLQTTQRNILGEDLGP 116
Query: 121 LQ-QEIRRCQHQMQLTEEQLR 140
L +E+ + ++Q++++ +Q+R
Sbjct: 117 LSMKELEQLENQIEVSLKQIR 137
>Os04g0580700 MADS box transcription factor MADS17
Length = 254
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR ++++KRIEN NRQVTFSKRRNGL+KKAYELSVLCD ++AL++FS G+L F G
Sbjct: 6 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 64
Query: 61 RRIEDVLTRY 70
I L +Y
Sbjct: 65 AGINKTLEKY 74
>Os03g0753100 Transcription factor, MADS-box domain containing protein
Length = 239
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 54/70 (77%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K+ ++RIEN +RQVTF+KRRNGL+KKAYELS+LCD ++AL++FS +GRL FS
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
Query: 61 RRIEDVLTRY 70
+ L RY
Sbjct: 61 SNMLKTLERY 70
>AF109153
Length = 249
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR ++++KRIEN NRQVTFSKRRNGL+KKAYELSVLCD ++AL++FS G+L F G
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 59
Query: 61 RRIEDVLTRY 70
I L +Y
Sbjct: 60 AGINKTLEKY 69
>Os02g0731200 Transcription factor MADS57
Length = 241
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K+ I+RI+N +RQVTFSKRRNGL+KKA ELS+LCD ++ L++FS +GRL FS
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSS- 59
Query: 61 RRIEDVLTRYINLPESDRGG 80
++ V+ RY N E GG
Sbjct: 60 TNMKTVIDRYTNAKEELLGG 79
>AF141965
Length = 233
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
M R + ++KRIEN +RQVTFSKRRNGL+KKA+ELSVLCD ++AL++FSP GRL F+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 RRIEDVLTRY 70
++ + RY
Sbjct: 61 PSLQKTIDRY 70
>Os10g0536100 Transcription factor MADS56
Length = 230
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
M R + ++KRIEN +RQVTFSKRRNGL+KKA+ELSVLCD ++AL++FSP GRL F+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 RRIEDVLTRY 70
++ + RY
Sbjct: 61 PSLQKTIDRY 70
>Os03g0752800 MADS14 protein
Length = 246
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 55/70 (78%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K+Q+KRIEN NRQVTFSKRR+GL+KKA E+SVLCD ++AL++FS G+L ++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 RRIEDVLTRY 70
++ +L RY
Sbjct: 61 SCMDKILERY 70
>AK069331
Length = 284
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 55/70 (78%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K+Q+KRIEN NRQVTFSKRR+GL+KKA E+SVLCD ++AL++FS G+L ++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 RRIEDVLTRY 70
++ +L RY
Sbjct: 61 SCMDKILERY 70
>Os03g0122600 Transcription factor, MADS-box domain containing protein
Length = 230
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 49/58 (84%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFS 58
M R K Q+KRIEN +RQVTFSKRRNGL+KKA+ELSVLCD ++AL++FSP G+L F+
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFA 58
>Os02g0761000 Similar to Transcription factor MADS55
Length = 228
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
M R + +IKRIE+ RQVTFSKRR GL KKA ELSVLCD D+AL++FS +G+LSHF+
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
Query: 61 RRIEDVLTRY 70
+ +++ +Y
Sbjct: 60 SSMNEIIDKY 69
>Os12g0501700 Transcription factor, MADS-box domain containing protein
Length = 233
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHF-SG 59
MGR K+Q++RIEN +RQVTFSKRR GL+KKA+E++VLCD+D+A ++FS G L H+ S
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 60 RRRIEDVLTRY 70
+E +L +Y
Sbjct: 61 HTTMERILEKY 71
>Os04g0304400 Similar to MADS-box protein AGL16-II
Length = 227
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K+ IKRI+N NRQVTFSKRR GL+KKA EL++LCD D+ L++FS +GRL FS
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSS- 59
Query: 61 RRIEDVLTRY 70
++ ++ RY
Sbjct: 60 SSMKSIIERY 69
>Os08g0431900 Transcription factor MADS23
Length = 159
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K++IKRI+N +RQVTFSKRR+GL KKA ELS+LCD ++ LL+FS + RL F+
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFAS- 59
Query: 61 RRIEDVLTRY 70
++ ++ RY
Sbjct: 60 SSMKSIIERY 69
>Os06g0712700 MADS-box protein SPW1
Length = 224
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHF-SG 59
MGR K++IKRIEN NRQVT+SKRR G++KKA EL+VLCD +A++MFS +G+ F S
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 60 RRRIEDVLTRY 70
I+ + RY
Sbjct: 61 STDIKGIFDRY 71
>Os02g0579600 Transcription factor MADS27
Length = 240
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K+ I+RI+N +RQVTFSKRRNG+ KKA EL++LCD ++ L++FS +GRL +S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSS- 59
Query: 61 RRIEDVLTRY 70
++ V+ RY
Sbjct: 60 TSMKSVIDRY 69
>Os01g0883100 Similar to PISTILLATA-like MADS box protein
Length = 209
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHF-SG 59
MGR K++IKRIEN NRQVTFSKRR+G++KKA E+SVLCD ++ +++FS +G+L + S
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 60 RRRIEDVLTRY 70
+ + +L +Y
Sbjct: 61 KTSLSRILEKY 71
>Os04g0614100 Transcription factor, MADS-box domain containing protein
Length = 178
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSG- 59
MGR ++++K+IEN NRQVTFSKRR GL+KKA EL++LCD I +++FS +G++ +S
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 60 RRRIEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESD 100
RI ++ RY+ P S R + ++ +I +T++K E++
Sbjct: 61 PWRIANIFDRYLKAP-STRFEEMDVQQRIIQEMTRMKDENN 100
>Os01g0922800 Similar to MADS-box protein PTM5
Length = 164
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 3 RVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGRRR 62
R ++Q++RIE+ +RQV FSKRR GL KKA+EL++LCD+++ALL+FSP G+L +S
Sbjct: 4 RGRVQLRRIEDKASRQVRFSKRRAGLFKKAFELALLCDVEVALLVFSPVGKLYEYSS-SS 62
Query: 63 IEDVLTRY 70
IE RY
Sbjct: 63 IEGTYDRY 70
>Os05g0423400 Similar to PISTILLATA-like MADS box protein
Length = 215
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 47/57 (82%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHF 57
MGR K++IKRIEN NRQVTFSKRR G++KKA E+ VLCD ++ +++FS +G+LS +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDY 57
>Os02g0170300 Similar to MADS box protein ZMM17
Length = 260
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 46/57 (80%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHF 57
MGR K++IKRIEN NRQVTFSKRR GL+KKA EL+VLCD + +++FS +G++ +
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEY 57
>Os06g0108100
Length = 767
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 8 IKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFS 58
++RIE+ RQVTFSKRR GL+KKA ELSVLCD ++ALL+FSP GR HF+
Sbjct: 1 MRRIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPRGRFFHFA 51
>Os08g0112700 Similar to TAGL12 transcription factor
Length = 222
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 51/70 (72%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
M R K+Q++RIEN +RQVTF KRR GL+KKA ELS+LC+ DI +++FS G+L +
Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
Query: 61 RRIEDVLTRY 70
+E+++ RY
Sbjct: 61 GTMEELIERY 70
>Os04g0461300 Transcription factor, MADS-box domain containing protein
Length = 94
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR K+ I+RI+N +RQVTFSKRRNG+ KKA EL++LCD ++ L++FS +GRL ++
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAS- 59
Query: 61 RRIEDVLTRY 70
++ V+ RY
Sbjct: 60 TSMKSVIDRY 69
>Os01g0975800
Length = 208
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
+GR K++I+RIE+ RQV FSKRR G KKA ELS+LC D+A ++FSP+G+ F G
Sbjct: 15 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSF-GH 73
Query: 61 RRIEDVLTRYINLPESDRGGTIQNR 85
+E +L R+ LP+S G + R
Sbjct: 74 PSVECLLERF--LPDSSSGAAARVR 96
>Os12g0206800 Transcription factor, MADS-box domain containing protein
Length = 202
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
M R K+Q++RIEN +RQVTF KRR GL+KKA ELSVLCD D+ +++FS G+L +
Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60
Query: 61 RRIEDVLTRY 70
+ +++ RY
Sbjct: 61 GNMHNLVERY 70
>Os03g0186600 Transcription factor, MADS-box domain containing protein
Length = 248
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 3 RVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGRRR 62
R ++ I+RI+N+ RQVTFSKRR GL KKA ELS+LCD ++ L++FS +G+L F+
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAS-TS 80
Query: 63 IEDVLTRY 70
+E ++ RY
Sbjct: 81 MEQIIDRY 88
>Os08g0531900 Similar to MADS box transcription factor-like protein (MADS-box
protein AGL72)
Length = 69
Score = 74.7 bits (182), Expect = 9e-14, Method: Composition-based stats.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 6 LQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFS 58
++++RIE+ +RQV FSKRR+GL KKAYELSVLCD +ALL+FSP+GRL F+
Sbjct: 13 VELRRIEDRTSRQVRFSKRRSGLFKKAYELSVLCDAQVALLVFSPAGRLYEFA 65
>Os09g0116800
Length = 208
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 11/97 (11%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
+GR K++I+RIE+ RQV FSKRR G KKA ELS+LC D+A ++FSP+G+ F G
Sbjct: 13 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSF-GH 71
Query: 61 RRIEDVLTRYI--NLPES---DRGGTIQ-----NREY 87
+E +L R++ +LP + + G ++ NR+Y
Sbjct: 72 PSVEFLLDRFLSSSLPATAGKEEGSSVSVVAELNRQY 108
>Os01g0726400 Transcription factor, MADS-box domain containing protein
Length = 196
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 44/57 (77%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHF 57
MGR + +IKRIEN RQ TF KRR+GL KKA EL+VLCD D+ LL+FS SG+L HF
Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHF 57
>Os06g0503500
Length = 210
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
+GR +++I+RI+N RQVTFSKRRNGL KKA ELS LC +A++ FS +G + F G+
Sbjct: 10 LGRQRIEIRRIDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFAF-GQ 68
Query: 61 RRIEDVLTRY 70
++ V+ R+
Sbjct: 69 PTVDAVVRRF 78
>Os06g0347700
Length = 74
Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFS 58
M R K I RIEN +RQVTFSKRR+GL KKA EL++LCD + +L+FS +GRL +S
Sbjct: 1 MVRGKTVISRIENTTSRQVTFSKRRSGLFKKAKELAILCDAQVGVLVFSSTGRLYDYS 58
>Os06g0217300 Similar to Transcription factor MADS55
Length = 223
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 17 RQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGRRRIEDVLTRYI----N 72
RQVTFSKRR GL KKA EL+VLCD D+AL++FS +G+LS F+ + +++ +Y N
Sbjct: 17 RQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS-SNMNEIIDKYTTHSKN 75
Query: 73 LPESDRGGTI 82
L ++D+ +I
Sbjct: 76 LGKTDKQPSI 85
>Os02g0104100
Length = 103
Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/48 (66%), Positives = 42/48 (87%)
Query: 11 IENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFS 58
IE+ +RQVTFSKRR+GL+KKA+ELSVLCD ++AL++FSP GRL F+
Sbjct: 51 IEDATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPRGRLYQFA 98
>Os06g0667200 MADS30
Length = 221
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 14/111 (12%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSG- 59
MG+ K+++KRIE+ RQVTFSKRR G +KKA EL+VLCD + +++FS G+L F
Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSP 60
Query: 60 -------RRRIEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESDVTE 103
R E + TR L E++R E ++ +T+L+ E D E
Sbjct: 61 PVILMELFHRYE-ITTRNTRLQETNRDD-----EQMVMEITRLRNEIDQLE 105
>Os12g0407000
Length = 194
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
MGR +++I+RI+N RQVTF+KRR GL KKA EL++L +A+++FSP+ + F G
Sbjct: 10 MGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHVYAF-GH 68
Query: 61 RRIEDVLTRYINLP 74
++ VL Y ++P
Sbjct: 69 PSVDAVLRSYASVP 82
>Os05g0203600 Transcription factor, MADS-box domain containing protein
Length = 100
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 11 IENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGRR 61
IE+ +RQVTF KR NGL+KKAYELS+LCD ++AL++FS GRL +S R
Sbjct: 36 IEDTADRQVTFCKRCNGLLKKAYELSMLCDAEVALIVFSSRGRLYEYSNNR 86
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,723,280
Number of extensions: 544174
Number of successful extensions: 1704
Number of sequences better than 1.0e-10: 50
Number of HSP's gapped: 1704
Number of HSP's successfully gapped: 51
Length of query: 360
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 258
Effective length of database: 11,709,973
Effective search space: 3021173034
Effective search space used: 3021173034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)