BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0883100 Os01g0883100|AY551924
(209 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0883100 Similar to PISTILLATA-like MADS box protein 432 e-122
Os05g0423400 Similar to PISTILLATA-like MADS box protein 360 e-100
Os06g0712700 MADS-box protein SPW1 150 4e-37
Os02g0170300 Similar to MADS box protein ZMM17 147 4e-36
Os09g0507200 MADS box protein 128 3e-30
AF109153 127 7e-30
Os04g0580700 MADS box transcription factor MADS17 127 8e-30
Os06g0667200 MADS30 125 2e-29
Os02g0682200 Similar to MADS box protein 124 5e-29
AK069331 122 2e-28
Os04g0614100 Transcription factor, MADS-box domain containi... 122 3e-28
Os03g0752800 MADS14 protein 121 3e-28
Os06g0162800 MADS box protein 120 8e-28
Os01g0886200 Similar to AGAMOUS homolog 120 9e-28
Os02g0579600 Transcription factor MADS27 119 2e-27
Os05g0203800 Similar to MADS box protein 119 2e-27
Os02g0731200 Transcription factor MADS57 118 3e-27
Os08g0431900 Transcription factor MADS23 116 1e-26
Os08g0531700 Similar to Developmental protein SEPALLATA2 (A... 114 5e-26
Os07g0605200 MADS box transcription factor 18 (OsMADS18) (M... 114 7e-26
Os07g0108900 MADS15 protein 112 2e-25
Os03g0753100 Transcription factor, MADS-box domain containi... 110 6e-25
Os12g0207000 Transcription factor 110 8e-25
Os12g0501700 Transcription factor, MADS-box domain containi... 110 1e-24
Os04g0304400 Similar to MADS-box protein AGL16-II 107 4e-24
Os03g0186600 Transcription factor, MADS-box domain containi... 107 4e-24
Os03g0122600 Transcription factor, MADS-box domain containi... 107 7e-24
Os03g0215400 Box protein (MADS box protein MADS1) 105 2e-23
Os01g0201700 Similar to MADS box protein 104 5e-23
Os08g0112700 Similar to TAGL12 transcription factor 104 6e-23
Os04g0461300 Transcription factor, MADS-box domain containi... 103 1e-22
Os02g0761000 Similar to Transcription factor MADS55 103 1e-22
AF141965 101 5e-22
Os12g0206800 Transcription factor, MADS-box domain containi... 100 5e-22
Os01g0726400 Transcription factor, MADS-box domain containi... 99 3e-21
Os10g0536100 Transcription factor MADS56 98 5e-21
Os06g0347700 93 1e-19
Os06g0217300 Similar to Transcription factor MADS55 91 7e-19
Os01g0975800 87 6e-18
Os09g0116800 82 2e-16
Os08g0494100 82 3e-16
Os06g0503500 81 5e-16
Os01g0922800 Similar to MADS-box protein PTM5 80 7e-16
Os06g0223300 Similar to TDR8 protein 80 1e-15
Os02g0104100 77 1e-14
Os08g0531900 Similar to MADS box transcription factor-like ... 76 2e-14
Os12g0407000 75 3e-14
Os11g0658700 Transcription factor, MADS-box domain containi... 74 9e-14
Os02g0164450 73 1e-13
Os06g0108100 72 2e-13
Os06g0333700 71 6e-13
Os05g0203600 Transcription factor, MADS-box domain containi... 70 1e-12
>Os01g0883100 Similar to PISTILLATA-like MADS box protein
Length = 209
Score = 432 bits (1111), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKE 120
KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKE
Sbjct: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKE 120
Query: 121 LIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIALSGSMRDLEL 180
LIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIALSGSMRDLEL
Sbjct: 121 LIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIALSGSMRDLEL 180
Query: 181 GYHPDRDFAAQMPITFRVQPSHPNLQENN 209
GYHPDRDFAAQMPITFRVQPSHPNLQENN
Sbjct: 181 GYHPDRDFAAQMPITFRVQPSHPNLQENN 209
>Os05g0423400 Similar to PISTILLATA-like MADS box protein
Length = 215
Score = 360 bits (924), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/213 (81%), Positives = 192/213 (90%), Gaps = 6/213 (2%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKIEIKRIENSTNRQVTFSKRR+GILKKAREI VLCDAEVGVVIFSSAGKL DYC+P
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTP 60
Query: 61 KTS-----LSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNS 115
KT+ LSRILEKYQTNSGKILWDEKHKSLSAEIDR+KKENDNMQIELRH+KGEDLNS
Sbjct: 61 KTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNS 120
Query: 116 LQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIALSGSM 175
LQPKELI IEEAL+NG N+ DK+MDHW H R +KMLEDE+K+LAF++HQQ++ LSG +
Sbjct: 121 LQPKELIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLEDEHKMLAFRVHQQEVELSGGI 180
Query: 176 RDLELGY-HPDRDFAAQMPITFRVQPSHPNLQE 207
R+LELGY H DRDFAA MP TFRVQPSHPNLQ+
Sbjct: 181 RELELGYHHDDRDFAASMPFTFRVQPSHPNLQQ 213
>Os06g0712700 MADS-box protein SPW1
Length = 224
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 128/218 (58%), Gaps = 21/218 (9%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKIEIKRIEN+TNRQVT+SKRR+GI+KKARE++VLCDA+V +++FSS GK +++CSP
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKE 120
T + I ++YQ G LW E+++++ + +K N N++ E+R GEDL+ L+ E
Sbjct: 61 STDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDE 120
Query: 121 LIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLL----AFKLHQQDIALSGSMR 176
L +E+ +D + V H + HV T + + K+ A++ QQ++ L
Sbjct: 121 LRGLEQNVDAALKEVR-----HRKYHVITTQTETYKKKVKHSYEAYETLQQELGLR---E 172
Query: 177 DLELGYHPDRDFAAQMP---------ITFRVQPSHPNL 205
+ G+ + FRV PS PNL
Sbjct: 173 EPAFGFVDNTGGGWDGGAGAGAAADMFAFRVVPSQPNL 210
>Os02g0170300 Similar to MADS box protein ZMM17
Length = 260
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 131/240 (54%), Gaps = 33/240 (13%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKIEIKRIEN+TNRQVTFSKRR G+LKKA E++VLCDA VGVVIFSS GK+++YCSP
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 KTSLSRILEKYQTNSGKILWDEKH-KSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPK 119
SL ++E YQT + + H + + E+ R++ E + + +R G+DL++L
Sbjct: 61 TCSLRELIEHYQTVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLA 120
Query: 120 ELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKL---HQQDIALS 172
++ +E+ L+ + V + L + R + +LED+N L + H Q
Sbjct: 121 DINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHHQAAVGG 180
Query: 173 G------------SMRDLELGYHPDRDFAAQMPIT-------------FRVQPSHPNLQE 207
G SM Y+ + + + +T FR+QP+ PNLQ+
Sbjct: 181 GDVKAMVEMAPVLSMLTAAPAYYGEESSSTALQLTPPLHAVDAAAAAGFRLQPTQPNLQD 240
>Os09g0507200 MADS box protein
Length = 248
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 115/179 (64%), Gaps = 12/179 (6%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRG++E+KRIEN NRQVTF+KRR+G+LKKA E+SVLCDAEV ++IFS+ GKLY++CS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
Query: 61 KTSLSRILEKYQTNSG-------KILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDL 113
+ S++R LE+YQ S + +E +S E ++K +N+Q R+L GEDL
Sbjct: 61 Q-SMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDL 119
Query: 114 NSLQPKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDENKLLAFKLHQQD 168
+L KEL +E+ LD+ + ++ ++D R ++ML + NK L KL + +
Sbjct: 120 GTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESN 178
>AF109153
Length = 249
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%), Gaps = 12/174 (6%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRG++E+KRIEN NRQVTFSKRR+G+LKKA E+SVLCDAEV ++IFSS GKLY++ S
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS- 59
Query: 61 KTSLSRILEKYQT------NSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLN 114
+++ LEKY + S L +H+S E+ R+K + + +Q RH+ GEDL
Sbjct: 60 -AGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLG 118
Query: 115 SLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKL 164
L KEL +E+ L+ + + +M+ + R ++ L + NK L KL
Sbjct: 119 PLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 172
>Os04g0580700 MADS box transcription factor MADS17
Length = 254
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%), Gaps = 12/174 (6%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRG++E+KRIEN NRQVTFSKRR+G+LKKA E+SVLCDAEV ++IFSS GKLY++ S
Sbjct: 6 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS- 64
Query: 61 KTSLSRILEKYQT------NSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLN 114
+++ LEKY + S L +H+S E+ R+K + + +Q RH+ GEDL
Sbjct: 65 -AGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLG 123
Query: 115 SLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKL 164
L KEL +E+ L+ + + +M+ + R ++ L + NK L KL
Sbjct: 124 PLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 177
>Os06g0667200 MADS30
Length = 221
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 105/169 (62%), Gaps = 8/169 (4%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MG+GKIE+KRIE++T RQVTFSKRR+G LKKA E++VLCDA+VGVV+FS GKL+D+CSP
Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSP 60
Query: 61 KTSLSRILEKYQTNSGKILWDEKHK---SLSAEIDRIKKENDNMQIELRHLKGEDLNSLQ 117
L + +Y+ + E ++ + EI R++ E D ++ LR GEDL+S+
Sbjct: 61 PVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVS 120
Query: 118 P-KELIMIEEALDNGIVNVN---DKLMD-HWERHVRTDKMLEDENKLLA 161
EL ++ L++ + V+ D+LM E R + + ++N L
Sbjct: 121 TVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLC 169
>Os02g0682200 Similar to MADS box protein
Length = 250
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 108/174 (62%), Gaps = 14/174 (8%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRG++E+KRIEN NRQVTFSKRR+G+LKKA E+SVLCDAEV ++IFSS GKLY++ S
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS- 59
Query: 61 KTSLSRILEKYQ------TNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLN 114
+++ LE+YQ +S L + +S E+ ++K + + +Q RHL GEDL
Sbjct: 60 -AGITKTLERYQHCCYNAQDSNNAL--SETQSWYHEMSKLKAKFEALQRTQRHLLGEDLG 116
Query: 115 SLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKL 164
L KEL +E+ L+ + + +M+ E R ++ L + N+ L KL
Sbjct: 117 PLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170
>AK069331
Length = 284
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 115/177 (64%), Gaps = 24/177 (13%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGK+++KRIEN NRQVTFSKRRSG+LKKA EISVLCDAEV ++IFS+ GKLY+Y +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYAT- 59
Query: 61 KTSLSRILEKYQ--TNSGKIL----------WDEKHKSLSAEIDRIKKENDNMQIELRHL 108
+ + +ILE+Y+ + + K+L W +++ L A+++ I+K +HL
Sbjct: 60 DSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQ-------KHL 112
Query: 109 KGEDLNSLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLA 161
GEDL SL KEL +E+ L+N + ++ + +++ R +K L++ENK+L
Sbjct: 113 MGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLG 169
>Os04g0614100 Transcription factor, MADS-box domain containing protein
Length = 178
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRG++E+K+IEN TNRQVTFSKRR G+LKKA E+++LCDA++GV++FS GK+Y+Y SP
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 61 KTSLSRILEKY-QTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPK 119
++ I ++Y + S + + + + E+ R+K EN+ ++I +R G+DL SL +
Sbjct: 61 PWRIANIFDRYLKAPSTRFEEMDVQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQ 120
Query: 120 ELIMIEEALDNGIVNV 135
++ +E+ ++ + V
Sbjct: 121 DVSNLEQQIEFSLYKV 136
>Os03g0752800 MADS14 protein
Length = 246
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 117/180 (65%), Gaps = 24/180 (13%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGK+++KRIEN NRQVTFSKRRSG+LKKA EISVLCDAEV ++IFS+ GKLY+Y +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYAT- 59
Query: 61 KTSLSRILEKYQ--TNSGKIL----------WDEKHKSLSAEIDRIKKENDNMQIELRHL 108
+ + +ILE+Y+ + + K+L W +++ L A+++ I+K +HL
Sbjct: 60 DSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQ-------KHL 112
Query: 109 KGEDLNSLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKL 164
GEDL SL KEL +E+ L+N + ++ + +++ R +K L++ENK+L +L
Sbjct: 113 MGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKEL 172
>Os06g0162800 MADS box protein
Length = 225
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 22/194 (11%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGK+E+KRIEN +RQVTF+KRR+G+LKKA E+SVLCDAEV ++IFS+ G+L+++ S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEF-ST 59
Query: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEID------RIKKENDNMQIELRHLKGEDLN 114
+ + + LE+Y++ + + E +L E+ ++K + +Q R+L GEDL
Sbjct: 60 SSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLV 119
Query: 115 SLQPKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDENKLLAFKLHQ---- 166
L KEL +E ++ ++N+ N +L+D R ++ L+D NK L K+ +
Sbjct: 120 PLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGE 179
Query: 167 -------QDIALSG 173
QD+ SG
Sbjct: 180 NMLHISCQDVGPSG 193
>Os01g0886200 Similar to AGAMOUS homolog
Length = 265
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 108/180 (60%), Gaps = 11/180 (6%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKIEIKRIEN T+RQVTF KRR+G+LKKA E+++LCDAE+ +++FSS G+LY++ +
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 60
Query: 61 KTSLSRILEKYQ------TNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLN 114
++ S I E+Y+ + S ++ H+ E +++ + +Q RHL GE +
Sbjct: 61 NSTRSTI-ERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIG 119
Query: 115 SLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKLHQQDIA 170
++ KEL +E L+ GI + K L E + + L++EN L K+ + + A
Sbjct: 120 NMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERA 179
>Os02g0579600 Transcription factor MADS27
Length = 240
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 118/216 (54%), Gaps = 29/216 (13%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKI I+RI+NST+RQVTFSKRR+GI KKA+E+++LCDAEVG++IFSS G+LY+Y S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSS- 59
Query: 61 KTSLSRILEKY-----------QTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLK 109
TS+ ++++Y NS W + SL ++ N+Q R L
Sbjct: 60 -TSMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQL-------HNLQENHRQLM 111
Query: 110 GEDLNSLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFK-- 163
GEDL+ L KEL +E L+ + +V K L+D R ++ EN L K
Sbjct: 112 GEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKIS 171
Query: 164 -LHQQDIALSGSMRDLELGYHPDRDFAAQMPITFRV 198
+ Q++ L + + E +RD + P F V
Sbjct: 172 LIRQENAELYKKIYETEGPSEVNRD--SPTPYNFAV 205
>Os05g0203800 Similar to MADS box protein
Length = 233
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 110/182 (60%), Gaps = 19/182 (10%)
Query: 3 RGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKT 62
RGKIEIKRIEN+TNRQVTF KRRSG+LKKA E+SVLCDAEV +V+FSS G+LY+Y +
Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN--N 102
Query: 63 SLSRILEKYQTNSGKILWDEKHKSLSAEID---------RIKKENDNMQIELRHLKGEDL 113
S+ +E+Y+ K D + S AEI+ ++K++ N+Q R L G+++
Sbjct: 103 SVKETIERYK----KANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNI 158
Query: 114 NSLQPKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDI 169
++ +EL +E LD G+ + N+ L E R + L+++N L K+ + +
Sbjct: 159 TTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESER 218
Query: 170 AL 171
L
Sbjct: 219 GL 220
>Os02g0731200 Transcription factor MADS57
Length = 241
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 129/219 (58%), Gaps = 34/219 (15%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKI I+RI+NST+RQVTFSKRR+G+LKKA+E+S+LCDAEVG+V+FSS G+LY++ S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSS- 59
Query: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSA---EIDRIKKENDNMQIELRHLKGEDLNSLQ 117
T++ ++++Y ++L + E ++++ N+Q + L GE+L+ L
Sbjct: 60 -TNMKTVIDRYTNAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLG 118
Query: 118 PKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFK---LHQQDIALSGS 174
++L +E L+ + N+ +R D +L+ E + L K +HQ++I LS S
Sbjct: 119 VRDLQGLENRLEISLRNI----------RMRKDNLLKSEIEELHVKGSLIHQENIELSRS 168
Query: 175 M-----RDLELGYH----------PDRDFAAQMPITFRV 198
+ + LEL Y+ D + ++ P +FR+
Sbjct: 169 LNVMSQQKLEL-YNKLQACEQRGATDANESSSTPYSFRI 206
>Os08g0431900 Transcription factor MADS23
Length = 159
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 95/146 (65%), Gaps = 20/146 (13%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKIEIKRI+N+T+RQVTFSKRRSG+ KKARE+S+LCDAEVG+++FSS +LYD+ S
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFAS- 59
Query: 61 KTSLSRILEKY--------QT---NSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLK 109
+S+ I+E+Y QT +S LW ++ SL ++ N+Q R L
Sbjct: 60 -SSMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQL-------HNLQEYHRQLL 111
Query: 110 GEDLNSLQPKELIMIEEALDNGIVNV 135
G+ L+ L ++L +E L+ + N+
Sbjct: 112 GQQLSGLDVEDLQNLESKLEMSLKNI 137
>Os08g0531700 Similar to Developmental protein SEPALLATA2 (Agamous-like MADS box
protein AGL4)
Length = 310
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 118/214 (55%), Gaps = 47/214 (21%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRG++E+KRIEN NRQVTF+KRR+G+LKKA E+SVLCDAEV ++IFS+ GKLY++CS
Sbjct: 27 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 86
Query: 61 KTSLSRILEKYQTNS----GKILWDEKHKSLSA---EIDRIKKENDNMQ----------- 102
+ S+++ LEKYQ S + + + + L A E ++K +N+Q
Sbjct: 87 Q-SMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRQYYKSKH 145
Query: 103 ------------------------IELRHLKGEDLNSLQPKELIMIEEALDNGIVNV--- 135
+ R+L GEDL+SL KEL +E+ LD+ + +V
Sbjct: 146 RLCLVRSKVWNLVKIRDDVTEKLCMYERNLLGEDLDSLGIKELESLEKQLDSSLKHVRTT 205
Query: 136 -NDKLMDHWERHVRTDKMLEDENKLLAFKLHQQD 168
L+D R ++M+ + N+ L KL + +
Sbjct: 206 RTKHLVDQLTELQRKEQMVSEANRCLRRKLEESN 239
>Os07g0605200 MADS box transcription factor 18 (OsMADS18) (MADS box protein 2)
(MADS box protein 28) (FDRMADS7)
Length = 249
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 106/173 (61%), Gaps = 18/173 (10%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRG ++++RIEN NRQVTFSKRR+G+LKKA EISVLCDA+V +++FS+ GKLY++ S
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSS- 59
Query: 61 KTSLSRILEKYQTNSGKILWDEK---------HKSLSAEIDRIKKENDNMQIELRHLKGE 111
+S+ ILE+YQ S +DE+ ++ E +K + D +Q R L GE
Sbjct: 60 HSSMEGILERYQRYS----FDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGE 115
Query: 112 DLNSLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLL 160
L++L KEL +E L+ + ++ K L + + +K L+++N +L
Sbjct: 116 QLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVL 168
>Os07g0108900 MADS15 protein
Length = 267
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 86/128 (67%), Gaps = 20/128 (15%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGK+++KRIEN NRQVTFSKRR+G+LKKA EISVLCDAEV ++FS GKLY+Y +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYAT- 59
Query: 61 KTSLSRILEKYQ--TNSGKIL----------WDEKHKSLSAEIDRIKKENDNMQIELRHL 108
+ + +ILE+Y+ + + K L W +++ L A+I+ I+K + +HL
Sbjct: 60 DSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCH-------KHL 112
Query: 109 KGEDLNSL 116
GEDL SL
Sbjct: 113 MGEDLESL 120
>Os03g0753100 Transcription factor, MADS-box domain containing protein
Length = 239
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 107/179 (59%), Gaps = 12/179 (6%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGK+ ++RIEN +RQVTF+KRR+G+LKKA E+S+LCDAEV +V+FS AG+LY + S
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSS- 59
Query: 61 KTSLSRILEKYQ------TNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLN 114
+++ + LE+YQ ++ DE + ++ +K + +Q R+L GEDL
Sbjct: 60 SSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVN-LKAHVEILQQSQRNLLGEDLA 118
Query: 115 SLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKLHQQDI 169
L EL +E + + + + L+D R ++ML+D N++L KL + D+
Sbjct: 119 PLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDV 177
>Os12g0207000 Transcription factor
Length = 270
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 93/142 (65%), Gaps = 8/142 (5%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRG+IEIKRIEN+T+RQVTF KRR+G+LKKA E+SVLCDAEV +++FSS G+LY+Y S
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SN 59
Query: 61 KTSLSRILEKYQ-------TNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDL 113
++ +++Y+ T+ ++ + E +++ + +Q +HL G+++
Sbjct: 60 NNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNV 119
Query: 114 NSLQPKELIMIEEALDNGIVNV 135
++L KEL +E L+ GI +
Sbjct: 120 SNLSLKELKQLESRLEKGISKI 141
>Os12g0501700 Transcription factor, MADS-box domain containing protein
Length = 233
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 104/171 (60%), Gaps = 17/171 (9%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGK++++RIEN +RQVTFSKRR G+LKKA EI+VLCD +V ++FS+ G L+ Y S
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 61 KTSLSRILEKY-------QTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDL 113
T++ RILEKY + N+ + E S+S + +++ + ++ R+L G++L
Sbjct: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
Query: 114 NSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKL 164
+SL +++ +E +D + N+ R +K+L ++N +L K+
Sbjct: 121 DSLTLQDIQQLENQIDTSLNNIRS----------RKEKLLMEKNTILEKKI 161
>Os04g0304400 Similar to MADS-box protein AGL16-II
Length = 227
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 97/153 (63%), Gaps = 21/153 (13%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKI IKRI+N+ NRQVTFSKRR G++KKARE+++LCDA+VG+++FS G+LYD+ S
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSS- 59
Query: 61 KTSLSRILEKYQTNSGKILWDEKHKSL----------SAEIDRIKKENDNMQIELRHLKG 110
+S+ I+E+YQ E+H L E+ ++++ N+ R L G
Sbjct: 60 -SSMKSIIERYQEAG------EEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLG 112
Query: 111 EDLNSLQPKELIMIEEALD---NGIVNVNDKLM 140
E++++ ++L +++ ++ + I N D+L+
Sbjct: 113 EEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLL 145
>Os03g0186600 Transcription factor, MADS-box domain containing protein
Length = 248
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 105/165 (63%), Gaps = 13/165 (7%)
Query: 3 RGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKT 62
R +I I+RI+N RQVTFSKRR G+ KKA E+S+LCDAEVG+V+FS+ GKL+ + S T
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAS--T 79
Query: 63 SLSRILEKYQTNSGKILWDEKHKSL------SAEIDRIKKENDNMQIELRHLKGEDLNSL 116
S+ +I+++Y ++S K L + L S+ R+K+E + LR ++GE+L+ L
Sbjct: 80 SMEQIIDRYNSHS-KTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRL 138
Query: 117 QPKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDEN 157
++L +E++L++G+ +V + K++D + R L +EN
Sbjct: 139 NVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEEN 183
>Os03g0122600 Transcription factor, MADS-box domain containing protein
Length = 230
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 120/211 (56%), Gaps = 28/211 (13%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
M RGK ++KRIEN T+RQVTFSKRR+G+LKKA E+SVLCDAEV +++FS GKLY++ S
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIEL-------RHLKGEDL 113
T + +E+Y+T + + + +K++ +I+++K + D + +L R L GE L
Sbjct: 61 ST--QKTIERYRTYTKENIG---NKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKL 115
Query: 114 NSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIALSG 173
+ +EL +E L+ ++++ R K+LE++ KL ++++ L
Sbjct: 116 DECSIEELHSLEVKLERSLISIRG----------RKTKLLEEQ----VAKLREKEMKLRK 161
Query: 174 SMRDLELGYHPDRDFAAQMPITFRVQPSHPN 204
+L +A P+T R + +P+
Sbjct: 162 DNEELREKCKNQPPLSA--PLTVRAEDENPD 190
>Os03g0215400 Box protein (MADS box protein MADS1)
Length = 257
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGK+E+KRIEN +RQVTF+KRR+G+LKKA E+S+LCDAEV ++IFS G+L+++ S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSS- 59
Query: 61 KTSLSRILEKYQT---NSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQ 117
+ + + LE+Y++ NS E + E ++K + +Q R++ GEDL L
Sbjct: 60 SSCMYKTLERYRSCNYNSQDAAAPENEINYQ-EYLKLKTRVEFLQTTQRNILGEDLGPLS 118
Query: 118 PKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDENKLLAFKLHQ 166
KEL +E ++ + + N L+D ++ L+D NK L KL +
Sbjct: 119 MKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQE 171
>Os01g0201700 Similar to MADS box protein
Length = 154
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 65/84 (77%), Gaps = 8/84 (9%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKIEIKRIEN+TNRQVTF KRR+G+LKKA E+SVLCDAEV +++FSS G+LY+Y
Sbjct: 41 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--A 98
Query: 61 KTSLSRILEKYQ------TNSGKI 78
S+ +E+Y+ +NSG +
Sbjct: 99 NNSVKSTVERYKKANSDTSNSGTV 122
>Os08g0112700 Similar to TAGL12 transcription factor
Length = 222
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 99/155 (63%), Gaps = 16/155 (10%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
M RGK++++RIEN +RQVTF KRR+G+LKKARE+S+LC+A++G++IFS+ GKLYD +
Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
Query: 61 KTSLSRILEKYQTNSGK---ILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQ 117
T + ++E+Y++ SG+ D++ E +K+E + +Q LR++ G N
Sbjct: 61 GT-MEELIERYKSASGEQANACGDQRMDP-KQEAMVLKQEINLLQKGLRYIYGNRAN--- 115
Query: 118 PKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKM 152
E + +EE +N ++ ++ W ++R+ KM
Sbjct: 116 --EHMTVEE------LNALERYLEIWMYNIRSAKM 142
>Os04g0461300 Transcription factor, MADS-box domain containing protein
Length = 94
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 63/71 (88%), Gaps = 2/71 (2%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRGKI I+RI+NST+RQVTFSKRR+GI KKA+E+++LCDAEVG+VIFSS G+LY+Y S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAS- 59
Query: 61 KTSLSRILEKY 71
TS+ ++++Y
Sbjct: 60 -TSMKSVIDRY 69
>Os02g0761000 Similar to Transcription factor MADS55
Length = 228
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 12/175 (6%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
M R + EIKRIE++ RQVTFSKRR G+ KKA E+SVLCDA+V +++FSS GKL + S
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
Query: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQ-----IELRHLKGEDLNS 115
+S++ I++KY T+S L + SL ++ K + N Q + LR ++GE+L
Sbjct: 60 -SSMNEIIDKYNTHSNN-LGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEG 117
Query: 116 LQPKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDENKLLAFKLHQ 166
L EL +E+ L+ G+ V + + M+ R L +EN L ++ Q
Sbjct: 118 LSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQ 172
>AF141965
Length = 233
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 109/189 (57%), Gaps = 24/189 (12%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
M RG+ E+KRIEN T+RQVTFSKRR+G+LKKA E+SVLCDAEV +++FS G+LY++ S
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 KTSLSRILEKYQTNSGKILWDEKH---KSLSAEIDRIKKENDNMQIEL-------RHLKG 110
SL + +++Y+ + + H K++ +I ++K + + +L R + G
Sbjct: 61 -PSLQKTIDRYKA------YTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILG 113
Query: 111 EDLNSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIA 170
E+L +EL +E L+ + N+ K + ER + K+ E E LL + +
Sbjct: 114 ENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQI--AKLKEKERTLL-----KDNEN 166
Query: 171 LSGSMRDLE 179
L G R+LE
Sbjct: 167 LRGKHRNLE 175
>Os12g0206800 Transcription factor, MADS-box domain containing protein
Length = 202
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 111/186 (59%), Gaps = 10/186 (5%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
M RGK++++RIEN +RQVTF KRR G+LKKARE+SVLCDA+VGV+IFSS GKL++ +
Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELAT- 59
Query: 61 KTSLSRILEKYQTN--SGKILWDEKHKSLSAE--IDRIKKENDNMQIELRHLKGEDLNSL 116
++ ++E+YQ+N G++ + AE I +++E D +Q LR G +
Sbjct: 60 NGNMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEM 119
Query: 117 QPKELIMIEEALDNGIVNVNDKLMDHWERHVR----TDKMLEDENKLLAFKLHQQDIALS 172
+L +E+ L+ I + M ++ ++ + +L++ N++L K+ +Q L
Sbjct: 120 TLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKEQQ-KLY 178
Query: 173 GSMRDL 178
S+ DL
Sbjct: 179 MSLLDL 184
>Os01g0726400 Transcription factor, MADS-box domain containing protein
Length = 196
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGRG+ EIKRIEN T RQ TF KRR G+ KKARE++VLCDA++ +++FS++GKLY + SP
Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSP 60
Query: 61 KT-SLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPK 119
S+ +E+Y+ + +W + + AE++++ D ++ +LR + +D
Sbjct: 61 TVPSVREFVERYEATTHTKVWADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVP 120
Query: 120 ELIMIEEALDNGIVNV 135
L +E L+ + V
Sbjct: 121 SLEALEHNLEAAMRKV 136
>Os10g0536100 Transcription factor MADS56
Length = 230
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 108/189 (57%), Gaps = 24/189 (12%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
M RG+ E+KRIEN T+RQVTFSKRR+G+LKKA E+SVLCDAEV +++FS G+LY++ S
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 KTSLSRILEKYQTNSGKILWDEKH---KSLSAEIDRIKKENDNMQIEL-------RHLKG 110
SL + +++Y+ + + H K++ +I ++K + + +L R + G
Sbjct: 61 -PSLQKTIDRYKA------YTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILG 113
Query: 111 EDLNSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIA 170
E+L +EL +E L+ + + K + E+ + K+ E E LL + +
Sbjct: 114 ENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQI--AKLKEKERTLL-----KDNEN 166
Query: 171 LSGSMRDLE 179
L G R+LE
Sbjct: 167 LRGKHRNLE 175
>Os06g0347700
Length = 74
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 51/57 (89%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDY 57
M RGK I RIEN+T+RQVTFSKRRSG+ KKA+E+++LCDA+VGV++FSS G+LYDY
Sbjct: 1 MVRGKTVISRIENTTSRQVTFSKRRSGLFKKAKELAILCDAQVGVLVFSSTGRLYDY 57
>Os06g0217300 Similar to Transcription factor MADS55
Length = 223
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 82/128 (64%), Gaps = 7/128 (5%)
Query: 13 NSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQ 72
++ RQVTFSKRR G+ KKA E++VLCDA+V +V+FSS GKL + S ++++ I++KY
Sbjct: 13 SAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS--SNMNEIIDKYT 70
Query: 73 TNSGKILWDEKHKSLSAEIDRIKKENDNMQ-----IELRHLKGEDLNSLQPKELIMIEEA 127
T+S + +K S+ ++ K + N Q ++LR ++GE+L L +EL +E+
Sbjct: 71 THSKNLGKTDKQPSIDLNLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKN 130
Query: 128 LDNGIVNV 135
L+ G+ V
Sbjct: 131 LEAGLQRV 138
>Os01g0975800
Length = 208
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 39/182 (21%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
+GR KIEI+RIE+ RQV FSKRR+G KKA E+S+LC A+V V+FS AGK Y + P
Sbjct: 15 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHP 74
Query: 61 KTSLSRILEKY--QTNSGKIL-----------------WDEKHKSLSA--EIDRIKKEND 99
S+ +LE++ ++SG + ++ L A E + ++E
Sbjct: 75 --SVECLLERFLPDSSSGAAARVRRGANNNGGGGMVGELNRQYGELRAMVEAHKARRERA 132
Query: 100 NMQIELRHLKGE------DLNSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKML 153
+ +IE+ G D+ + P+EL+ A G++ V + R D+ML
Sbjct: 133 DEKIEMERAAGRWLPMDADVRRMSPEELM----AFGTGLMAVQAAV------SARADQML 182
Query: 154 ED 155
D
Sbjct: 183 RD 184
>Os09g0116800
Length = 208
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
+GR KIEI+RIE+ RQV FSKRR+G KKA E+S+LC A+V V+FS AGK Y + P
Sbjct: 13 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHP 72
Query: 61 KTSLSRILEKYQTNS 75
S+ +L+++ ++S
Sbjct: 73 --SVEFLLDRFLSSS 85
>Os08g0494100
Length = 337
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 48/54 (88%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKL 54
MGR K+ IKRIEN+TNRQVTFSKRR+G++KKA E+SVLCD +V +++FS +G+L
Sbjct: 1 MGRVKLPIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDVALLMFSPSGRL 54
>Os06g0503500
Length = 210
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 46/60 (76%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
+GR +IEI+RI+NS RQVTFSKRR+G+ KKA E+S LC A V VV FSSAG ++ + P
Sbjct: 10 LGRQRIEIRRIDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFAFGQP 69
>Os01g0922800 Similar to MADS-box protein PTM5
Length = 164
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 3 RGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKT 62
RG+++++RIE+ +RQV FSKRR+G+ KKA E+++LCD EV +++FS GKLY+Y S +
Sbjct: 4 RGRVQLRRIEDKASRQVRFSKRRAGLFKKAFELALLCDVEVALLVFSPVGKLYEYSS--S 61
Query: 63 SLSRILEKYQTNSG 76
S+ ++YQ +G
Sbjct: 62 SIEGTYDRYQQFAG 75
>Os06g0223300 Similar to TDR8 protein
Length = 360
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGR K++IKRIEN NRQVTFSKRR+G++KKA E+SVLCD ++ +++FS +G+L + S
Sbjct: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHF-SG 59
Query: 61 KTSLSRILEKY 71
+ + +L +Y
Sbjct: 60 RRRIEDVLTRY 70
>Os02g0104100
Length = 103
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 44/52 (84%)
Query: 11 IENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKT 62
IE++T+RQVTFSKRRSG+LKKA E+SVLCDAEV +++FS G+LY + S +
Sbjct: 51 IEDATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPRGRLYQFASASS 102
>Os08g0531900 Similar to MADS box transcription factor-like protein (MADS-box
protein AGL72)
Length = 69
Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 47/54 (87%)
Query: 6 IEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCS 59
+E++RIE+ T+RQV FSKRRSG+ KKA E+SVLCDA+V +++FS AG+LY++ S
Sbjct: 13 VELRRIEDRTSRQVRFSKRRSGLFKKAYELSVLCDAQVALLVFSPAGRLYEFAS 66
>Os12g0407000
Length = 194
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGR +IEI+RI+N RQVTF+KRR G+ KKA E+++L A V VV+FS A +Y + P
Sbjct: 10 MGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHVYAFGHP 69
Query: 61 KTSLSRILEKYQTNSGK 77
S+ +L Y + G+
Sbjct: 70 --SVDAVLRSYASVPGE 84
>Os11g0658700 Transcription factor, MADS-box domain containing protein
Length = 385
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 65/104 (62%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
MGR K++IK++ENS+ R VT+SKRRSGILKKA+E+S+LCD + +++FS K
Sbjct: 1 MGRVKLKIKKLENSSGRHVTYSKRRSGILKKAKELSILCDIPLILLMFSPNDKPTICVGD 60
Query: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIE 104
+S+ ++ KY + + K +SL A KK + ++ I+
Sbjct: 61 HSSIEDVITKYAQQTPQERAKRKLESLEALKKTFKKLDHDVNIQ 104
>Os02g0164450
Length = 286
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 2 GRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPK 61
GR +IE+K IEN RQV FSKRR G+ KKA E+SVLC A V VV FS AG+ +C
Sbjct: 23 GRQRIEMKLIENKEARQVCFSKRREGVFKKASELSVLCGARVAVVFFSPAGR--PHCFGH 80
Query: 62 TSLSRILEKY 71
S+S + +++
Sbjct: 81 PSVSAVADRF 90
>Os06g0108100
Length = 767
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 45/59 (76%)
Query: 8 IKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSR 66
++RIE++T RQVTFSKRR G+LKKA E+SVLCDAEV +++FS G+ + + S + R
Sbjct: 1 MRRIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPRGRFFHFASAPSPFYR 59
>Os06g0333700
Length = 238
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
M + KIEIKRI+N RQV FSKRR + KKA E+ +C AEV +++ S AGK + + +P
Sbjct: 1 MTKRKIEIKRIKNEEARQVCFSKRRPSVFKKASELYTVCGAEVAMLVKSPAGKFFSFGAP 60
Query: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEI 91
S+ +L ++ + KH S+ I
Sbjct: 61 --SVGFVLSRFHATTT----SRKHSSMGVTI 85
>Os05g0203600 Transcription factor, MADS-box domain containing protein
Length = 100
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 41/47 (87%)
Query: 11 IENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDY 57
IE++ +RQVTF KR +G+LKKA E+S+LCDAEV +++FSS G+LY+Y
Sbjct: 36 IEDTADRQVTFCKRCNGLLKKAYELSMLCDAEVALIVFSSRGRLYEY 82
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,635,156
Number of extensions: 257484
Number of successful extensions: 902
Number of sequences better than 1.0e-10: 52
Number of HSP's gapped: 876
Number of HSP's successfully gapped: 52
Length of query: 209
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 113
Effective length of database: 12,023,257
Effective search space: 1358628041
Effective search space used: 1358628041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 154 (63.9 bits)