BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0536100 Os10g0536100|AY345224
(230 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0536100 Transcription factor MADS56 469 e-133
AF141965 457 e-129
Os03g0122600 Transcription factor, MADS-box domain containi... 269 1e-72
Os02g0682200 Similar to MADS box protein 168 3e-42
Os12g0207000 Transcription factor 159 1e-39
Os04g0580700 MADS box transcription factor MADS17 159 2e-39
AF109153 159 2e-39
Os07g0605200 MADS box transcription factor 18 (OsMADS18) (M... 155 3e-38
Os09g0507200 MADS box protein 152 2e-37
Os03g0215400 Box protein (MADS box protein MADS1) 152 2e-37
Os05g0203800 Similar to MADS box protein 151 4e-37
Os01g0886200 Similar to AGAMOUS homolog 148 3e-36
Os06g0162800 MADS box protein 145 2e-35
Os03g0753100 Transcription factor, MADS-box domain containi... 141 3e-34
Os02g0731200 Transcription factor MADS57 139 2e-33
Os04g0304400 Similar to MADS-box protein AGL16-II 138 3e-33
Os08g0431900 Transcription factor MADS23 137 6e-33
Os08g0531700 Similar to Developmental protein SEPALLATA2 (A... 134 4e-32
Os02g0579600 Transcription factor MADS27 133 1e-31
Os02g0170300 Similar to MADS box protein ZMM17 130 1e-30
Os02g0761000 Similar to Transcription factor MADS55 128 3e-30
Os03g0752800 MADS14 protein 127 7e-30
AK069331 126 2e-29
Os08g0112700 Similar to TAGL12 transcription factor 125 3e-29
Os07g0108900 MADS15 protein 123 9e-29
Os06g0667200 MADS30 121 5e-28
Os01g0201700 Similar to MADS box protein 119 2e-27
Os12g0206800 Transcription factor, MADS-box domain containi... 119 2e-27
Os04g0614100 Transcription factor, MADS-box domain containi... 115 3e-26
Os12g0501700 Transcription factor, MADS-box domain containi... 114 4e-26
Os06g0712700 MADS-box protein SPW1 112 2e-25
Os03g0186600 Transcription factor, MADS-box domain containi... 110 6e-25
Os06g0217300 Similar to Transcription factor MADS55 110 1e-24
Os02g0104100 101 4e-22
Os01g0726400 Transcription factor, MADS-box domain containi... 101 4e-22
Os01g0922800 Similar to MADS-box protein PTM5 100 2e-21
Os04g0461300 Transcription factor, MADS-box domain containi... 99 3e-21
Os01g0883100 Similar to PISTILLATA-like MADS box protein 98 6e-21
Os08g0494100 97 7e-21
Os08g0531900 Similar to MADS box transcription factor-like ... 94 7e-20
Os06g0108100 90 1e-18
Os06g0223300 Similar to TDR8 protein 88 4e-18
Os05g0423400 Similar to PISTILLATA-like MADS box protein 88 4e-18
Os06g0347700 84 1e-16
Os05g0203600 Transcription factor, MADS-box domain containi... 80 1e-15
Os09g0116800 79 4e-15
Os02g0164450 78 6e-15
Os01g0975800 77 1e-14
Os06g0503500 75 4e-14
Os06g0333700 75 5e-14
Os12g0407000 70 9e-13
Os05g0303400 70 1e-12
>Os10g0536100 Transcription factor MADS56
Length = 230
Score = 469 bits (1208), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALV 180
IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALV
Sbjct: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALV 180
Query: 181 ANHMTTTTAPAAWPRDVPMTSSTAGAMDVETDLYIGLPGTERSSNRSETG 230
ANHMTTTTAPAAWPRDVPMTSSTAGAMDVETDLYIGLPGTERSSNRSETG
Sbjct: 181 ANHMTTTTAPAAWPRDVPMTSSTAGAMDVETDLYIGLPGTERSSNRSETG 230
>AF141965
Length = 233
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/233 (97%), Positives = 228/233 (97%), Gaps = 3/233 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEG S
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCS 120
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALV 180
IEELRGLEMKLEKSLH IRLKKTELLE+QIAKLKEKERTLLKDNENLRGKHRNLEAAALV
Sbjct: 121 IEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGKHRNLEAAALV 180
Query: 181 ANHMTTTTAPAAWPRDVPMTSSTAG---AMDVETDLYIGLPGTERSSNRSETG 230
ANHMTTTTAPAAWPRDVPMTSSTAG AMDVETDLYIGLPGTERSSNRSETG
Sbjct: 181 ANHMTTTTAPAAWPRDVPMTSSTAGAADAMDVETDLYIGLPGTERSSNRSETG 233
>Os03g0122600 Transcription factor, MADS-box domain containing protein
Length = 230
Score = 269 bits (687), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/224 (64%), Positives = 176/224 (78%), Gaps = 7/224 (3%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
MVRG+T++KRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRG+LYEFASA
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
S QKTI+RY+ YTK+++ NKT+QQDI+QVK D GLAKKLEAL+ +RK+LGE L+ S
Sbjct: 61 -STQKTIERYRTYTKENIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECS 119
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALV 180
IEEL LE+KLE+SL IR +KT+LLE+Q+AKL+EKE L KDNE LR K +N +
Sbjct: 120 IEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKN---QPPL 176
Query: 181 ANHMTTTTAPAAWPRDVPMTSSTAGAMDVETDLYIGLPGTERSS 224
+ +T R++ ++T MDVET+L+IGLPG RSS
Sbjct: 177 SAPLTVRAEDENPDRNI---NTTNDNMDVETELFIGLPGRSRSS 217
>Os02g0682200 Similar to MADS box protein
Length = 250
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 138/226 (61%), Gaps = 14/226 (6%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RGR ELKRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYEF SA
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
+ KT++RY+ + ++ + Q + L K EAL ++R +LGE+L S
Sbjct: 61 -GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLS 119
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALV 180
++EL+ LE +LE +L + R +KT+L+ +Q+ +L+ KER L + N L+ K LE
Sbjct: 120 VKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHK---LEVEGST 176
Query: 181 ANHMTTTTAPAAWPRDVPMTSSTA--------GAMDVETDLYIGLP 218
+N+ A+W + + + A AMD E L IG P
Sbjct: 177 SNYRAMQQ--ASWAQGAVVENGAAYVQPPPHSAAMDSEPTLQIGYP 220
>Os12g0207000 Transcription factor
Length = 270
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 121/176 (68%), Gaps = 9/176 (5%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RGR E+KRIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RGRLYE+++
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKT-----IQQDIQQ-VKDDTLGLAKKLEALDESRRKILGE 114
+++ TIDRYK K H T I+ + QQ + ++ L +++ L + + ++G+
Sbjct: 61 NNVKATIDRYK---KAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGD 117
Query: 115 NLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
N+ S++EL+ LE +LEK + KIR +K ELL +I + ++E L DN +LR K
Sbjct: 118 NVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTK 173
>Os04g0580700 MADS box transcription factor MADS17
Length = 254
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 123/184 (66%), Gaps = 6/184 (3%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RGR ELKRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYEF SA
Sbjct: 6 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 65
Query: 61 PSLQKTIDRYK--AYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEG 118
+ KT+++Y Y N+ + Q + L KLE L S+R +LGE+L
Sbjct: 66 -GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 124
Query: 119 FSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAA 178
SI+EL+ LE +LE SL + R +KT+++ +Q+ L+ KER L + N+ L+ K LEA A
Sbjct: 125 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNK---LEAEA 181
Query: 179 LVAN 182
+N
Sbjct: 182 DSSN 185
>AF109153
Length = 249
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 123/184 (66%), Gaps = 6/184 (3%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RGR ELKRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYEF SA
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 PSLQKTIDRYK--AYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEG 118
+ KT+++Y Y N+ + Q + L KLE L S+R +LGE+L
Sbjct: 61 -GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 119
Query: 119 FSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAA 178
SI+EL+ LE +LE SL + R +KT+++ +Q+ L+ KER L + N+ L+ K LEA A
Sbjct: 120 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNK---LEAEA 176
Query: 179 LVAN 182
+N
Sbjct: 177 DSSN 180
>Os07g0605200 MADS box transcription factor 18 (OsMADS18) (MADS box protein 2)
(MADS box protein 28) (FDRMADS7)
Length = 249
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 18/218 (8%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG +L+RIEN +RQVTFSKRRNGLLKKA E+SVLCDA+VALIVFS +G+LYEF+S
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAK-KLEALDESRRKILGENLEGF 119
S++ ++RY+ Y+ D + Q+ D G+ K KL+AL +S+R++LGE L+
Sbjct: 61 SSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTL 120
Query: 120 SIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRG-----KHRNL 174
+I+EL+ LE +LE SL IR KK +LL + I++L++KE++L N L+ K +N
Sbjct: 121 TIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKN- 179
Query: 175 EAAALV---------ANHMTTTTAPAAWPRDVPMTSST 203
A++ A T++ P P +P T+++
Sbjct: 180 --NAIINTNREEQNGATPSTSSPTPVTAPDPIPTTNNS 215
>Os09g0507200 MADS box protein
Length = 248
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 119/174 (68%), Gaps = 5/174 (2%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RGR ELKRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYEF S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
Query: 61 PSLQKTIDRYKAYTKDH----VNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENL 116
S+ +T++RY+ ++ + NK + +Q +++ L L ++E L ++R +LGE+L
Sbjct: 61 QSMTRTLERYQKFSYGGPDTAIQNKE-NELVQSSRNEYLKLKARVENLQRTQRNLLGEDL 119
Query: 117 EGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
I+EL LE +L+ SL IR +T+ + Q+ L+ +E+ L + N+ LR K
Sbjct: 120 GTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRK 173
>Os03g0215400 Box protein (MADS box protein MADS1)
Length = 257
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 118/170 (69%), Gaps = 2/170 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ ELKRIEN SRQVTF+KRRNGLLKKA+ELS+LCDAEVALI+FS RGRL+EF+S+
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
+ KT++RY++ + + + +I + L L ++E L ++R ILGE+L S
Sbjct: 61 SCMYKTLERYRSCNYNSQDAAAPENEIN--YQEYLKLKTRVEFLQTTQRNILGEDLGPLS 118
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
++EL LE ++E SL +IR +K + L Q+ LK KE+ L N++LR K
Sbjct: 119 MKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKK 168
>Os05g0203800 Similar to MADS box protein
Length = 233
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 2/169 (1%)
Query: 3 RGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
RG+ E+KRIEN T+RQVTF KRR+GLLKKA+ELSVLCDAEVAL+VFS RGRLYE+ S S
Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEY-SNNS 103
Query: 63 LQKTIDRYKAYTKDHVNNKTIQQ-DIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSI 121
+++TI+RYK D N T+ + + Q + + L +++ L S R ++G+N+ +
Sbjct: 104 VKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNH 163
Query: 122 EELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
EL+ LE +L+K L KIR +K ELL +I ++ +E L DN L+ K
Sbjct: 164 RELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSK 212
>Os01g0886200 Similar to AGAMOUS homolog
Length = 265
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 114/172 (66%), Gaps = 2/172 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ E+KRIEN TSRQVTF KRRNGLLKKA+EL++LCDAE+ALIVFS RGRLYEF++
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTI--QQDIQQVKDDTLGLAKKLEALDESRRKILGENLEG 118
S + TI+RYK + + + Q + + + +++ L + R ++GE++
Sbjct: 61 NSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGN 120
Query: 119 FSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
+ +EL+ LE +LEK + +IR KK ELL +I ++++E L +N LR K
Sbjct: 121 MTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAK 172
>Os06g0162800 MADS box protein
Length = 225
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 115/172 (66%), Gaps = 2/172 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ ELKRIEN SRQVTF+KRRNGLLKKA+ELSVLCDAEVALI+FS RGRL+EF+++
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 PSLQKTIDRYKA--YTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEG 118
+ KT++RY++ Y + + + L L ++E L ++R +LGE+L
Sbjct: 61 SCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVP 120
Query: 119 FSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
S++EL LE ++E SL IR K + L Q+ +LK KE+ L N++L+ K
Sbjct: 121 LSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRK 172
>Os03g0753100 Transcription factor, MADS-box domain containing protein
Length = 239
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 114/171 (66%), Gaps = 1/171 (0%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ L+RIEN SRQVTF+KRRNGLLKKA+ELS+LCDAEVAL++FS GRLY+F+S+
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQD-IQQVKDDTLGLAKKLEALDESRRKILGENLEGF 119
++ KT++RY+ Y + D +Q + + L +E L +S+R +LGE+L
Sbjct: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
Query: 120 SIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
+ EL LE ++ ++L +IR +KT++L ++ LK KE+ L N L+ K
Sbjct: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRK 171
>Os02g0731200 Transcription factor MADS57
Length = 241
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ ++RI+N TSRQVTFSKRRNGLLKKA ELS+LCDAEV L+VFS GRLYEF+S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
+++ IDRY K+ + +I+ + + L ++L L ES ++++GE L G
Sbjct: 61 -NMKTVIDRY-TNAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLG 118
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDN 164
+ +L+GLE +LE SL IR++K LL+ +I +L K + ++N
Sbjct: 119 VRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQEN 162
>Os04g0304400 Similar to MADS-box protein AGL16-II
Length = 227
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 131/218 (60%), Gaps = 6/218 (2%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ +KRI+N +RQVTFSKRR GL+KKA EL++LCDA+V LIVFS GRLY+F+S+
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
S++ I+RY+ ++H + + + + L ++++ L + R++LGE + F+
Sbjct: 61 -SMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFT 119
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK-----HRNLE 175
+ +L+ L+ ++E SLH IR KK +LL ++I KL EK + K+N LR K RN+E
Sbjct: 120 VRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFNIAHQRNIE 179
Query: 176 AAALVANHMTTTTAPAAWPRDVPMTSSTAGAMDVETDL 213
+ + +T++ P SST V DL
Sbjct: 180 LHKKLNSGESTSSEQVTRSSKDPGESSTPRDSRVCIDL 217
>Os08g0431900 Transcription factor MADS23
Length = 159
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 102/156 (65%), Gaps = 1/156 (0%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ E+KRI+N TSRQVTFSKRR+GL KKA ELS+LCDAEV L+VFS RLY+FAS+
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
S++ I+RY +D + + + + L ++L L E R++LG+ L G
Sbjct: 61 -SMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLD 119
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEK 156
+E+L+ LE KLE SL IRL+K ++ QI +L K
Sbjct: 120 VEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
>Os08g0531700 Similar to Developmental protein SEPALLATA2 (Agamous-like MADS box
protein AGL4)
Length = 310
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 122/209 (58%), Gaps = 40/209 (19%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RGR ELKRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYEF S
Sbjct: 27 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 86
Query: 61 PSLQKTIDRYK----AYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRK------ 110
S+ KT+++Y+ A + V N+ +Q ++ +++ L L ++E L ++R+
Sbjct: 87 QSMTKTLEKYQKCSYAGPETAVQNRESEQ-LKASRNEYLKLKARVENLQRTQRQYYKSKH 145
Query: 111 -----------------------------ILGENLEGFSIEELRGLEMKLEKSLHKIRLK 141
+LGE+L+ I+EL LE +L+ SL +R
Sbjct: 146 RLCLVRSKVWNLVKIRDDVTEKLCMYERNLLGEDLDSLGIKELESLEKQLDSSLKHVRTT 205
Query: 142 KTELLEQQIAKLKEKERTLLKDNENLRGK 170
+T+ L Q+ +L+ KE+ + + N LR K
Sbjct: 206 RTKHLVDQLTELQRKEQMVSEANRCLRRK 234
>Os02g0579600 Transcription factor MADS27
Length = 240
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 126/218 (57%), Gaps = 2/218 (0%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ ++RI+N TSRQVTFSKRRNG+ KKA EL++LCDAEV L++FS GRLYE++S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
S++ IDRY + +++ + + L ++L L E+ R+++GE+L G +
Sbjct: 61 -SMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLN 119
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNL-EAAAL 179
++EL+ LE +LE SL +R KK +L +I +L K + ++N L K + + A
Sbjct: 120 VKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENAE 179
Query: 180 VANHMTTTTAPAAWPRDVPMTSSTAGAMDVETDLYIGL 217
+ + T P+ RD P + A + +GL
Sbjct: 180 LYKKIYETEGPSEVNRDSPTPYNFAVIEKTNVPVQLGL 217
>Os02g0170300 Similar to MADS box protein ZMM17
Length = 260
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 107/168 (63%), Gaps = 4/168 (2%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFAS- 59
M RG+ E+KRIEN T+RQVTFSKRR GLLKKA EL+VLCDA V +++FS G+++E+ S
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 60 APSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGF 119
SL++ I+ Y+ T H + I D QQ+ + + ++E LD R+ G++L
Sbjct: 61 TCSLRELIEHYQTVTNTHF--EEINHD-QQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNL 117
Query: 120 SIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENL 167
++ ++ LE +LE S+ K+R +K +LL QQ+ L+ KE L N L
Sbjct: 118 TLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFL 165
>Os02g0761000 Similar to Transcription factor MADS55
Length = 228
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 105/170 (61%), Gaps = 1/170 (0%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M R R E+KRIE+ +RQVTFSKRR GL KKA ELSVLCDA+VALIVFS G+L FAS+
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
S+ + ID+Y ++ + + D+ L ++L R++ GE LEG S
Sbjct: 61 -SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLS 119
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
I+EL+ LE LE LH++ L K + +QI++L+ K L ++N LR +
Sbjct: 120 IDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQ 169
>Os03g0752800 MADS14 protein
Length = 246
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 119/169 (70%), Gaps = 1/169 (0%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ +LKRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVALI+FS +G+LYE+A+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQ-QVKDDTLGLAKKLEALDESRRKILGENLEGF 119
+ K ++RY+ Y+ + + D Q + L K+E + + ++ ++GE+LE
Sbjct: 61 SCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESL 120
Query: 120 SIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLR 168
+++EL+ LE +LE SL IR +K++L+ + I +L+ KE++L ++N+ L+
Sbjct: 121 NLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQ 169
>AK069331
Length = 284
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 120/175 (68%), Gaps = 15/175 (8%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ +LKRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVALI+FS +G+LYE+A+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLG--------LAKKLEALDESRRKIL 112
+ K ++RY+ Y+ ++ + + DT G L K+E + + ++ ++
Sbjct: 61 SCMDKILERYERYS-------YAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLM 113
Query: 113 GENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENL 167
GE+LE +++EL+ LE +LE SL IR +K++L+ + I +L+ KE++L ++N+ L
Sbjct: 114 GEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVL 168
>Os08g0112700 Similar to TAGL12 transcription factor
Length = 222
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ +L+RIENP RQVTF KRR GLLKKA ELS+LC+A++ +I+FS G+LY+ A+
Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENL-EGF 119
++++ I+RYK+ + + N Q+ K + + L +++ L + R I G E
Sbjct: 61 GTMEELIERYKSASGEQANACGDQR--MDPKQEAMVLKQEINLLQKGLRYIYGNRANEHM 118
Query: 120 SIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
++EEL LE LE ++ IR K +++ Q+I LK KE L NE L+ K
Sbjct: 119 TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEK 169
>Os07g0108900 MADS15 protein
Length = 267
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 119/171 (69%), Gaps = 5/171 (2%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ +LKRIEN +RQVTFSKRRNGLLKKA E+SVLCDAEVA IVFSP+G+LYE+A+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKD---DTLGLAKKLEALDESRRKILGENLE 117
+ K ++RY+ Y+ + I + + + + L K+E + + + ++GE+LE
Sbjct: 61 SRMDKILERYERYS--YAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLE 118
Query: 118 GFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLR 168
+++EL+ LE +LE SL I +K+ L+ + I++L++KER+L ++N+ L+
Sbjct: 119 SLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQ 169
>Os06g0667200 MADS30
Length = 221
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 110/169 (65%), Gaps = 3/169 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M +G+ E+KRIE+ T RQVTFSKRR G LKKA EL+VLCDA+V ++VFS +G+L++F S
Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSP 60
Query: 61 PS-LQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGF 119
P L + RY+ T++ +T + D Q V + T L +++ L+ S R+ GE+L
Sbjct: 61 PVILMELFHRYEITTRNTRLQETNRDDEQMVMEIT-RLRNEIDQLEASLRRQTGEDLSSV 119
Query: 120 S-IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENL 167
S ++EL L+++LE SL K+ +K EL+ QQ+ ++ +T+ + N L
Sbjct: 120 STVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFL 168
>Os01g0201700 Similar to MADS box protein
Length = 154
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 80/105 (76%), Gaps = 2/105 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ E+KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RGRLYE+A+
Sbjct: 41 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN- 99
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQ-DIQQVKDDTLGLAKKLEAL 104
S++ T++RYK D N+ T+ + + Q + ++ L +++ +L
Sbjct: 100 NSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSL 144
>Os12g0206800 Transcription factor, MADS-box domain containing protein
Length = 202
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 111/195 (56%), Gaps = 2/195 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
MVRG+ +++RIENP RQVTF KRR GLLKKA ELSVLCDA+V +I+FS +G+L+E A+
Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
++ ++RY++ Q Q + L ++++ L R G +
Sbjct: 61 GNMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMT 120
Query: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLE--AAA 178
+++L LE LE +++IR K ++++Q+I L+ KE L + NE L+ K + + +
Sbjct: 121 LDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKEQQKLYMS 180
Query: 179 LVANHMTTTTAPAAW 193
L+ H T P +
Sbjct: 181 LLDLHSQQPTQPMTY 195
>Os04g0614100 Transcription factor, MADS-box domain containing protein
Length = 178
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 95/147 (64%), Gaps = 12/147 (8%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RGR ELK+IENPT+RQVTFSKRR GLLKKA EL++LCDA++ +IVFS G++YE++S
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 61 P-SLQKTIDRYKAYTKDHVNNKTIQQDIQQ----VKDDTLGLAKKLEALDESRRKILGEN 115
P + DRY +QQ I Q +KD+ +L + R+ +G++
Sbjct: 61 PWRIANIFDRYLKAPSTRFEEMDVQQRIIQEMTRMKDEN----NRLRII---MRQYMGDD 113
Query: 116 LEGFSIEELRGLEMKLEKSLHKIRLKK 142
L +++++ LE ++E SL+K+RL+K
Sbjct: 114 LASLTLQDVSNLEQQIEFSLYKVRLRK 140
>Os12g0501700 Transcription factor, MADS-box domain containing protein
Length = 233
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 109/160 (68%), Gaps = 4/160 (2%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ +++RIEN SRQVTFSKRR GLLKKA E++VLCD +VA IVFS +G L+ +AS+
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 61 -PSLQKTIDRYKAYTKDHVNNKTIQQDIQ---QVKDDTLGLAKKLEALDESRRKILGENL 116
++++ +++Y + N I++ + + D + L ++EAL +S+R ++G+ L
Sbjct: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
Query: 117 EGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEK 156
+ ++++++ LE +++ SL+ IR +K +LL ++ L++K
Sbjct: 121 DSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKK 160
>Os06g0712700 MADS-box protein SPW1
Length = 224
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 100/160 (62%), Gaps = 11/160 (6%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFAS- 59
M RG+ E+KRIEN T+RQVT+SKRR G++KKA EL+VLCDA+VA+I+FS G+ +EF S
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 60 APSLQKTIDRYKAYTKDHV---NNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENL 116
+ ++ DRY+ + + +Q+ + +KD L ++ R+ +GE+L
Sbjct: 61 STDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEI-------RQRMGEDL 113
Query: 117 EGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEK 156
+G +ELRGLE ++ +L ++R +K ++ Q K+K
Sbjct: 114 DGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKK 153
>Os03g0186600 Transcription factor, MADS-box domain containing protein
Length = 248
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Query: 3 RGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
R R ++RI+N +RQVTFSKRR GL KKA ELS+LCDAEV L+VFS G+L++FAS S
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAST-S 80
Query: 63 LQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESR---RKILGENLEGF 119
+++ IDRY +++K + Q D+Q +D+ A+ E L E+ R++ GE L
Sbjct: 81 MEQIIDRYNSHSKTLQRAEPSQLDLQ--GEDSSTCARLKEELAETSLRLRQMRGEELHRL 138
Query: 120 SIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLR 168
++E+L+ LE LE L + K++ + +I L+ K L+++N L+
Sbjct: 139 NVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLK 187
>Os06g0217300 Similar to Transcription factor MADS55
Length = 223
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 11/211 (5%)
Query: 16 SRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTK 75
+RQVTFSKRR GL KKA EL+VLCDA+VAL+VFS G+L +FAS+ ++ + ID+Y ++K
Sbjct: 16 ARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASS-NMNEIIDKYTTHSK 74
Query: 76 DHVNNKTIQQ---DIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLE 132
+ KT +Q D+ L ++L R++ GE LEG S+EEL+ +E LE
Sbjct: 75 NL--GKTDKQPSIDLNLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLE 132
Query: 133 KSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALVANHMTTTTAPAA 192
L ++ K + Q+I++L+ K L ++N LR + + A L
Sbjct: 133 AGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPTAGLAVPDTENVLTEDG 192
Query: 193 WPRDVPMTSSTAGAMDVETD-----LYIGLP 218
+ MT+ +G+ D L +GLP
Sbjct: 193 QSSESVMTALNSGSSQDNDDGSDISLKLGLP 223
>Os02g0104100
Length = 103
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/52 (90%), Positives = 50/52 (96%)
Query: 11 IENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
IE+ TSRQVTFSKRR+GLLKKAFELSVLCDAEVALIVFSPRGRLY+FASA S
Sbjct: 51 IEDATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPRGRLYQFASASS 102
>Os01g0726400 Transcription factor, MADS-box domain containing protein
Length = 196
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 98/157 (62%), Gaps = 8/157 (5%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFAS- 59
M RGR+E+KRIENPT RQ TF KRR+GL KKA EL+VLCDA++ L++FS G+LY F S
Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSP 60
Query: 60 -APSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTL-GLAKKLEALDESRRKILGENLE 117
PS+++ ++RY+A T + + DI+Q + L + + L++ R + ++ E
Sbjct: 61 TVPSVREFVERYEATT-----HTKVWADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGE 115
Query: 118 GFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLK 154
+++ L LE LE ++ K+R +K + +I L+
Sbjct: 116 EYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQ 152
>Os01g0922800 Similar to MADS-box protein PTM5
Length = 164
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 3 RGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
RGR +L+RIE+ SRQV FSKRR GL KKAFEL++LCD EVAL+VFSP G+LYE++S+ S
Sbjct: 4 RGRVQLRRIEDKASRQVRFSKRRAGLFKKAFELALLCDVEVALLVFSPVGKLYEYSSS-S 62
Query: 63 LQKTIDRYKAYT 74
++ T DRY+ +
Sbjct: 63 IEGTYDRYQQFA 74
>Os04g0461300 Transcription factor, MADS-box domain containing protein
Length = 94
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ ++RI+N TSRQVTFSKRRNG+ KKA EL++LCDAEV L++FS GRLYE+AS
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAST 60
Query: 61 PSLQKTIDRY 70
S++ IDRY
Sbjct: 61 -SMKSVIDRY 69
>Os01g0883100 Similar to PISTILLATA-like MADS box protein
Length = 209
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 108/189 (57%), Gaps = 24/189 (12%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ E+KRIEN T+RQVTFSKRR+G+LKKA E+SVLCDAEV +++FS G+LY++ S
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 61 -PSLQKTIDRYKA------YTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILG 113
SL + +++Y+ + + H K++ +I ++K + + +L R + G
Sbjct: 61 KTSLSRILEKYQTNSGKILWDEKH---KSLSAEIDRIKKENDNMQIEL-------RHLKG 110
Query: 114 ENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQI--AKLKEKERTLL-----KDNEN 166
E+L +EL +E L+ + + K + E+ + K+ E E LL + +
Sbjct: 111 EDLNSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIA 170
Query: 167 LRGKHRNLE 175
L G R+LE
Sbjct: 171 LSGSMRDLE 179
>Os08g0494100
Length = 337
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M R + +KRIEN T+RQVTFSKRRNGL+KKA+ELSVLCD +VAL++FSP GRL F+
Sbjct: 1 MGRVKLPIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDVALLMFSPSGRLSHFSGR 60
Query: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
++ I RY ++ H + I Q+ ++++ + ++L+ + E R ++ + F
Sbjct: 61 RGVEDVILRYMNLSE-HDRGEAI-QNREEIQQEIYSSQQQLQ-ITEDRLRMFEPDPAAFG 117
Query: 121 I-EELRGLEMKLEKSLHKIRLKKTELLEQQIAKL 153
E+ G E L + L ++ +K LL +A
Sbjct: 118 TSSEVDGCEKYLMELLTRVVERKNNLLSSHMAPF 151
>Os08g0531900 Similar to MADS box transcription factor-like protein (MADS-box
protein AGL72)
Length = 69
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 51/57 (89%)
Query: 6 TELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
EL+RIE+ TSRQV FSKRR+GL KKA+ELSVLCDA+VAL+VFSP GRLYEFAS+ S
Sbjct: 13 VELRRIEDRTSRQVRFSKRRSGLFKKAYELSVLCDAQVALLVFSPAGRLYEFASSTS 69
>Os06g0108100
Length = 767
Score = 90.1 bits (222), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/55 (80%), Positives = 49/55 (89%)
Query: 8 LKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
++RIE+ T RQVTFSKRR GLLKKA ELSVLCDAEVAL+VFSPRGR + FASAPS
Sbjct: 1 MRRIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPRGRFFHFASAPS 55
>Os06g0223300 Similar to TDR8 protein
Length = 360
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M R + ++KRIEN +RQVTFSKRRNGL+KKA+ELSVLCD ++AL++FSP GRL F+
Sbjct: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
Query: 61 PSLQKTIDRY 70
++ + RY
Sbjct: 61 RRIEDVLTRY 70
>Os05g0423400 Similar to PISTILLATA-like MADS box protein
Length = 215
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 16/140 (11%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M RG+ E+KRIEN T+RQVTFSKRR G+LKKA E+ VLCDAEV +++FS G+L ++ +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTP 60
Query: 61 ------PSLQKTIDRYKAYTKDHV---NNKTIQQDIQQVKDDTLGLAKKLEALDESRRKI 111
P L + +++Y+ + + +K++ +I +VK + + +L R +
Sbjct: 61 KTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIEL-------RHM 113
Query: 112 LGENLEGFSIEELRGLEMKL 131
GE+L +EL +E L
Sbjct: 114 KGEDLNSLQPKELIAIEEAL 133
>Os06g0347700
Length = 74
Score = 83.6 bits (205), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 52/60 (86%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
MVRG+T + RIEN TSRQVTFSKRR+GL KKA EL++LCDA+V ++VFS GRLY+++++
Sbjct: 1 MVRGKTVISRIENTTSRQVTFSKRRSGLFKKAKELAILCDAQVGVLVFSSTGRLYDYSNS 60
>Os05g0203600 Transcription factor, MADS-box domain containing protein
Length = 100
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 11 IENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFAS 59
IE+ RQVTF KR NGLLKKA+ELS+LCDAEVALIVFS RGRLYE+++
Sbjct: 36 IEDTADRQVTFCKRCNGLLKKAYELSMLCDAEVALIVFSSRGRLYEYSN 84
>Os09g0116800
Length = 208
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 3 RGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
R + E++RIE+ +RQV FSKRR G KKA ELS+LC A+VA +VFSP G+ Y F PS
Sbjct: 15 RQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGH-PS 73
Query: 63 LQKTIDRY 70
++ +DR+
Sbjct: 74 VEFLLDRF 81
>Os02g0164450
Length = 286
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 68/118 (57%), Gaps = 12/118 (10%)
Query: 3 RGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
R R E+K IEN +RQV FSKRR G+ KKA ELSVLC A VA++ FSP GR + F PS
Sbjct: 24 RQRIEMKLIENKEARQVCFSKRREGVFKKASELSVLCGARVAVVFFSPAGRPHCFGH-PS 82
Query: 63 LQKTIDRY-------KAYTKDHVNNKTIQQDIQQVKD---DTLG-LAKKLEALDESRR 109
+ DR+ A + + ++ +V++ D LG A++ +ALDE+ R
Sbjct: 83 VSAVADRFLLGRSPADAAAAAAEEEEAVVREFNRVEERLKDALGAAARRRDALDEAAR 140
>Os01g0975800
Length = 208
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 3 RGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
R + E++RIE+ +RQV FSKRR G KKA ELS+LC A+VA +VFSP G+ Y F PS
Sbjct: 17 RQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGH-PS 75
Query: 63 LQKTIDRY 70
++ ++R+
Sbjct: 76 VECLLERF 83
>Os06g0503500
Length = 210
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 3 RGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
R R E++RI+N RQVTFSKRRNGL KKA ELS LC A VA++ FS G ++ F P+
Sbjct: 12 RQRIEIRRIDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFAFGQ-PT 70
Query: 63 LQKTIDRY 70
+ + R+
Sbjct: 71 VDAVVRRF 78
>Os06g0333700
Length = 238
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 27/157 (17%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M + + E+KRI+N +RQV FSKRR + KKA EL +C AEVA++V SP G+ + F A
Sbjct: 1 MTKRKIEIKRIKNEEARQVCFSKRRPSVFKKASELYTVCGAEVAMLVKSPAGKFFSFG-A 59
Query: 61 PSLQKTIDRYKAYTKD-----------HVNNKTI------QQDIQQVKDDTLGLAKKLEA 103
PS+ + R+ A T H N+ TI QQ I ++++ +K++A
Sbjct: 60 PSVGFVLSRFHATTTSRKHSSMGVTIQHDNSATIKLHELNQQHI-ELQNQLQAQNEKMKA 118
Query: 104 LDESRRK--------ILGENLEGFSIEELRGLEMKLE 132
L E +K L +E E+L +M LE
Sbjct: 119 LQEVAKKESGGKVMGWLNSKVEDICQEDLEEFKMVLE 155
>Os12g0407000
Length = 194
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
M R R E++RI+N RQVTF+KRR GL KKA EL++L A VA++VFSP +Y F
Sbjct: 10 MGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHVYAFGH- 68
Query: 61 PSLQKTIDRY 70
PS+ + Y
Sbjct: 69 PSVDAVLRSY 78
>Os05g0303400
Length = 218
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 3 RGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
R + E+KRIE +R V FSKRR L KA ELS+LC+A +A +V SP GR + FA PS
Sbjct: 10 RKKVEIKRIEKKDARDVCFSKRRQTLFNKAGELSLLCNANIAAVVISPAGRGFSFAH-PS 68
Query: 63 LQKTIDRYKAYTKDHVNNKTI 83
+ DR + NN ++
Sbjct: 69 VDDVADRLASMAMGIPNNHSL 89
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.129 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,828,929
Number of extensions: 263751
Number of successful extensions: 965
Number of sequences better than 1.0e-10: 52
Number of HSP's gapped: 936
Number of HSP's successfully gapped: 52
Length of query: 230
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 133
Effective length of database: 11,971,043
Effective search space: 1592148719
Effective search space used: 1592148719
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 154 (63.9 bits)