BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0112700 Os08g0112700|AK069122
(222 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0112700 Similar to TAGL12 transcription factor 458 e-129
Os12g0206800 Transcription factor, MADS-box domain containi... 214 4e-56
Os07g0605200 MADS box transcription factor 18 (OsMADS18) (M... 142 2e-34
Os06g0162800 MADS box protein 135 2e-32
Os01g0886200 Similar to AGAMOUS homolog 134 6e-32
Os05g0203800 Similar to MADS box protein 131 4e-31
Os03g0215400 Box protein (MADS box protein MADS1) 129 2e-30
Os03g0753100 Transcription factor, MADS-box domain containi... 126 1e-29
Os03g0122600 Transcription factor, MADS-box domain containi... 125 2e-29
Os10g0536100 Transcription factor MADS56 125 3e-29
Os04g0304400 Similar to MADS-box protein AGL16-II 125 4e-29
AF141965 125 4e-29
Os08g0431900 Transcription factor MADS23 124 6e-29
Os12g0207000 Transcription factor 124 8e-29
AF109153 123 1e-28
Os04g0580700 MADS box transcription factor MADS17 123 1e-28
Os02g0579600 Transcription factor MADS27 121 3e-28
Os09g0507200 MADS box protein 120 5e-28
Os03g0752800 MADS14 protein 120 1e-27
Os02g0682200 Similar to MADS box protein 118 4e-27
Os02g0170300 Similar to MADS box protein ZMM17 117 6e-27
AK069331 116 1e-26
Os02g0731200 Transcription factor MADS57 115 2e-26
Os07g0108900 MADS15 protein 111 4e-25
Os08g0531700 Similar to Developmental protein SEPALLATA2 (A... 111 5e-25
Os01g0201700 Similar to MADS box protein 105 4e-23
Os01g0883100 Similar to PISTILLATA-like MADS box protein 104 6e-23
Os01g0726400 Transcription factor, MADS-box domain containi... 103 7e-23
Os03g0186600 Transcription factor, MADS-box domain containi... 103 1e-22
Os12g0501700 Transcription factor, MADS-box domain containi... 100 1e-21
Os06g0667200 MADS30 100 1e-21
Os05g0423400 Similar to PISTILLATA-like MADS box protein 99 2e-21
Os04g0614100 Transcription factor, MADS-box domain containi... 97 1e-20
Os02g0761000 Similar to Transcription factor MADS55 95 4e-20
Os04g0461300 Transcription factor, MADS-box domain containi... 94 8e-20
Os06g0712700 MADS-box protein SPW1 91 5e-19
Os08g0494100 85 4e-17
Os06g0347700 85 4e-17
Os06g0217300 Similar to Transcription factor MADS55 83 1e-16
Os01g0922800 Similar to MADS-box protein PTM5 80 9e-16
Os06g0223300 Similar to TDR8 protein 78 6e-15
Os09g0116800 75 3e-14
Os01g0975800 75 4e-14
Os02g0104100 71 8e-13
Os08g0531900 Similar to MADS box transcription factor-like ... 67 7e-12
Os06g0108100 67 1e-11
>Os08g0112700 Similar to TAGL12 transcription factor
Length = 222
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT
Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
Query: 61 GTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTV 120
GTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTV
Sbjct: 61 GTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTV 120
Query: 121 EELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLIDVG 180
EELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLIDVG
Sbjct: 121 EELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLIDVG 180
Query: 181 MMVADQQNGHFSTVPLLEEITNPLTILSGYSTCRGSEMGYSF 222
MMVADQQNGHFSTVPLLEEITNPLTILSGYSTCRGSEMGYSF
Sbjct: 181 MMVADQQNGHFSTVPLLEEITNPLTILSGYSTCRGSEMGYSF 222
>Os12g0206800 Transcription factor, MADS-box domain containing protein
Length = 202
Score = 214 bits (545), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 140/178 (78%), Gaps = 3/178 (1%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGKVQ+RRIENPVHRQVTFCKRR GLLKKARELS+LC+AD+G+IIFS+ GKL++LAT
Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60
Query: 61 GTMEELIERYKS--ASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHM 118
G M L+ERY+S A G+ ++ +Q +L++EI+LLQ+GLR YG A E M
Sbjct: 61 GNMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGE-M 119
Query: 119 TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGL 176
T+++L+ALE+ LE+W+Y IR+ KMQ+M QEIQ L++KEG+LK ANE+LQEK+ EQ L
Sbjct: 120 TLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKEQQKL 177
>Os07g0605200 MADS box transcription factor 18 (OsMADS18) (MADS box protein 2)
(MADS box protein 28) (FDRMADS7)
Length = 249
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 132/227 (58%), Gaps = 16/227 (7%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RG VQLRRIEN ++RQVTF KRR GLLKKA E+S+LC+AD+ +I+FS GKLY+ ++
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 61 GTMEELIERYKSASGEQANACGDQRMDPK---QEAMVLKQEINLLQKGLRYIYGNRANEH 117
+ME ++ERY+ S ++ D + E +LK +++ LQK R + G + +
Sbjct: 61 SSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQL-DT 119
Query: 118 MTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE----- 172
+T++EL LE LE + +IRS K Q++ + I L+ KE LK N +LQ K++E
Sbjct: 120 LTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ-KLMETEKEK 178
Query: 173 QNGLIDVGMMVADQQNGHFSTVPLLEEITNPLTILS---GYSTCRGS 216
N +I+ ++QNG + +T P I + S RGS
Sbjct: 179 NNAIINTNR---EEQNGATPSTSSPTPVTAPDPIPTTNNSQSQPRGS 222
>Os06g0162800 MADS box protein
Length = 225
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 5/179 (2%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGKV+L+RIEN + RQVTF KRR GLLKKA ELS+LC+A++ +IIFS G+L++ +T+
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 GTMEELIERYKSASGE----QANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANE 116
M + +ERY+S + +A+A + + QE + LK + LQ R + G
Sbjct: 61 SCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVP 120
Query: 117 HMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNG 175
++++EL LE +EI + NIRS+K Q ++ ++ LK KE L+ AN+ L+ KI E +G
Sbjct: 121 -LSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSG 178
>Os01g0886200 Similar to AGAMOUS homolog
Length = 265
Score = 134 bits (336), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK++++RIEN RQVTFCKRR GLLKKA EL+ILC+A+I +I+FS+ G+LY+ +
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 60
Query: 61 GTMEELIERYKSASGEQANACG----DQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANE 116
+ IERYK AS + + + +QEA ++ +I LQ R++ G
Sbjct: 61 NSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIG- 119
Query: 117 HMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172
+MT +EL +LE LE + IRS K +++ EI+ ++ +E L+ N L+ K+ E
Sbjct: 120 NMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAE 175
>Os05g0203800 Similar to MADS box protein
Length = 233
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 119/185 (64%), Gaps = 6/185 (3%)
Query: 2 ARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTG 61
+RGK++++RIEN +RQVTFCKRR+GLLKKA ELS+LC+A++ +++FS+ G+LY+ +
Sbjct: 44 SRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEY-SNN 102
Query: 62 TMEELIERYKSASGEQANACGDQRMDP---KQEAMVLKQEINLLQKGLRYIYGNRANEHM 118
+++E IERYK A+ + +NA ++ +QEA LKQ+I LQ R + G+ M
Sbjct: 103 SVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNIT-TM 161
Query: 119 TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE-QNGLI 177
EL LE L+ + IR+ K +++ EI+ ++ +E L+ N L+ K+ E + GL
Sbjct: 162 NHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGLQ 221
Query: 178 DVGMM 182
V MM
Sbjct: 222 TVNMM 226
>Os03g0215400 Box protein (MADS box protein MADS1)
Length = 257
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGKV+L+RIEN + RQVTF KRR GLLKKA ELS+LC+A++ +IIFS G+L++ +++
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 GTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTV 120
M + +ERY+S + +A + QE + LK + LQ R I G +++
Sbjct: 61 SCMYKTLERYRSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGP-LSM 119
Query: 121 EELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172
+EL LE +E+ + IRS K Q ++ ++ LKSKE L+ N+ L++K+ E
Sbjct: 120 KELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQE 171
>Os03g0753100 Transcription factor, MADS-box domain containing protein
Length = 239
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 8/182 (4%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGKV L+RIEN + RQVTF KRR GLLKKA ELSILC+A++ +++FS G+LY +++
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
Query: 61 GTMEELIERYKS---ASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEH 117
M + +ERY+ AS + A D+ + QE + LK + +LQ+ R + G
Sbjct: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP- 119
Query: 118 MTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLI 177
+ EL LE + + IRS K Q+++ E+ LK KE ML+ AN +L+ K+ E I
Sbjct: 120 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE----I 175
Query: 178 DV 179
DV
Sbjct: 176 DV 177
>Os03g0122600 Transcription factor, MADS-box domain containing protein
Length = 230
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 119/190 (62%), Gaps = 4/190 (2%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK Q++RIENP RQVTF KRR GLLKKA ELS+LC+A++ +I+FS GKLY+ A+
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 GTMEELIERYKSASGEQ-ANACGDQRMDP-KQEAMVLKQEINLLQKGLRYIYGNRANEHM 118
T ++ IERY++ + E N Q ++ K +A L +++ L+ R + G + +E
Sbjct: 61 ST-QKTIERYRTYTKENIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDE-C 118
Query: 119 TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLID 178
++EEL++LE LE + +IR K +++ +++ L+ KE L+ NE L+EK Q L
Sbjct: 119 SIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKNQPPLSA 178
Query: 179 VGMMVADQQN 188
+ A+ +N
Sbjct: 179 PLTVRAEDEN 188
>Os10g0536100 Transcription factor MADS56
Length = 230
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RG+ +L+RIENP RQVTF KRR GLLKKA ELS+LC+A++ +I+FS G+LY+ A+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 GTMEELIERYKSASGEQANACGDQR--MDPKQEAMVLKQEINLLQKGLRYIYGNRANEHM 118
++++ I+RYK+ + + N Q+ K + + L +++ L + R I G E
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENL-EGF 119
Query: 119 TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEK 169
++EEL LE LE ++ IR K +++ Q+I LK KE L NE L+ K
Sbjct: 120 SIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
>Os04g0304400 Similar to MADS-box protein AGL16-II
Length = 227
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 113/176 (64%), Gaps = 12/176 (6%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK+ ++RI+N ++RQVTF KRR GL+KKAREL+ILC+AD+G+I+FS G+LYD +++
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
Query: 61 GTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRAN----- 115
+M+ +IERY+ A E ++P EA ++E+ L++ ++ ++ N
Sbjct: 61 -SMKSIIERYQEAGEEHCRL-----LNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEE 114
Query: 116 -EHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKI 170
+ TV +L L+ +E+ +++IR+ K Q++ +EI L K +++ N L++K
Sbjct: 115 ISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKF 170
>AF141965
Length = 233
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 107/171 (62%), Gaps = 3/171 (1%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RG+ +L+RIENP RQVTF KRR GLLKKA ELS+LC+A++ +I+FS G+LY+ A+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 GTMEELIERYKSASGEQANACGDQR--MDPKQEAMVLKQEINLLQKGLRYIYGNRANEHM 118
++++ I+RYK+ + + N Q+ K + + L +++ L + R I G E
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENL-EGC 119
Query: 119 TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEK 169
++EEL LE LE ++NIR K +++ ++I LK KE L NE L+ K
Sbjct: 120 SIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGK 170
>Os08g0431900 Transcription factor MADS23
Length = 159
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 107/158 (67%), Gaps = 6/158 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK++++RI+N RQVTF KRR+GL KKARELSILC+A++G+++FS+ +LYD A++
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
Query: 61 GTMEELIERY---KSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEH 117
+M+ +IERY K + NA + ++ +QEA L+Q+++ LQ+ R + G + +
Sbjct: 61 -SMKSIIERYNETKEDPHQTMNASSEAKL-WQQEAASLRQQLHNLQEYHRQLLGQQLS-G 117
Query: 118 MTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSK 155
+ VE+L LE LE+ + NIR K +M+ +IQ L K
Sbjct: 118 LDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
>Os12g0207000 Transcription factor
Length = 270
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 113/183 (61%), Gaps = 16/183 (8%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RG+++++RIEN RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ +
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
Query: 61 GTMEELIERYKSASGEQANACGDQRMDP----------KQEAMVLKQEINLLQKGLRYIY 110
++ I+RYK +A+ACG P +QE+ L+ +I +LQ +++
Sbjct: 61 NNVKATIDRYK-----KAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLV 115
Query: 111 GNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKI 170
G+ + +++++EL LE LE + IR+ K +++ EI + +E L+ N L+ KI
Sbjct: 116 GDNVS-NLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKI 174
Query: 171 VEQ 173
E+
Sbjct: 175 AEE 177
>AF109153
Length = 249
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 108/174 (62%), Gaps = 6/174 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS+ GKLY+ +
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 GTMEELIERYKS----ASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANE 116
G + + +E+Y S A G + G + QE LK ++ LQ+ R++ G
Sbjct: 61 G-INKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 119
Query: 117 HMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKI 170
++++EL LE+ LE + R K QIM++++ L+ KE L N+ L+ K+
Sbjct: 120 -LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 172
>Os04g0580700 MADS box transcription factor MADS17
Length = 254
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 108/174 (62%), Gaps = 6/174 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS+ GKLY+ +
Sbjct: 6 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 65
Query: 61 GTMEELIERYKS----ASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANE 116
G + + +E+Y S A G + G + QE LK ++ LQ+ R++ G
Sbjct: 66 G-INKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 124
Query: 117 HMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKI 170
++++EL LE+ LE + R K QIM++++ L+ KE L N+ L+ K+
Sbjct: 125 -LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 177
>Os02g0579600 Transcription factor MADS27
Length = 240
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 113/172 (65%), Gaps = 4/172 (2%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK+ +RRI+N RQVTF KRR G+ KKA+EL+ILC+A++G++IFS+ G+LY+ ++T
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 GTMEELIERY-KSASGEQANACGDQRMDPKQ-EAMVLKQEINLLQKGLRYIYGNRANEHM 118
+M+ +I+RY KS +QA A + + Q EA L+Q+++ LQ+ R + G + +
Sbjct: 61 -SMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLS-GL 118
Query: 119 TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKI 170
V+EL +LE LEI + ++R+ K ++I EI L K ++ N L +KI
Sbjct: 119 NVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKI 170
>Os09g0507200 MADS box protein
Length = 248
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 110/181 (60%), Gaps = 6/181 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ +
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
Query: 61 GTMEELIERYKSAS-GEQANACGDQR----MDPKQEAMVLKQEINLLQKGLRYIYGNRAN 115
+M +ERY+ S G A ++ + E + LK + LQ+ R + G
Sbjct: 61 QSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLG 120
Query: 116 EHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNG 175
+ ++EL LE+ L+ + +IRS + Q M+ ++ L+ +E ML AN+ L+ K+ E N
Sbjct: 121 T-LGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQ 179
Query: 176 L 176
L
Sbjct: 180 L 180
>Os03g0752800 MADS14 protein
Length = 246
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 115/181 (63%), Gaps = 20/181 (11%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGKVQL+RIEN ++RQVTF KRR+GLLKKA E+S+LC+A++ +IIFS GKLY+ AT
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 GTMEELIERYK-----------SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYI 109
M++++ERY+ + S Q N C + R LK ++ +QK +++
Sbjct: 61 SCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRK--------LKAKVETIQKCQKHL 112
Query: 110 YGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEK 169
G E + ++EL LE+ LE + +IRS K Q+M++ I L+ KE L+ N++LQ++
Sbjct: 113 MGEDL-ESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKE 171
Query: 170 I 170
+
Sbjct: 172 L 172
>Os02g0682200 Similar to MADS box protein
Length = 250
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS+ GKLY+ +
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 GTMEELIERYKSA--SGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHM 118
G + L ERY+ + + +N + E LK + LQ+ R++ G +
Sbjct: 61 GITKTL-ERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGP-L 118
Query: 119 TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKI 170
+V+EL LE+ LE + R K Q+M+++++ L+ KE L N L+ K+
Sbjct: 119 SVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170
>Os02g0170300 Similar to MADS box protein ZMM17
Length = 260
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 114/185 (61%), Gaps = 11/185 (5%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLAT- 59
M RGK++++RIEN +RQVTF KRR GLLKKA EL++LC+A +G++IFS+ GK+++ +
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 60 TGTMEELIERYKSASGEQANACGDQRMDPKQEAMV----LKQEINLLQKGLRYIYGNRAN 115
T ++ ELIE Y++ + + ++ Q+ V ++ E+ L G+R G+ +
Sbjct: 61 TCSLRELIEHYQTVTNTHF-----EEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLS 115
Query: 116 EHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNG 175
++T+ ++N LE+ LE + +R+ K Q++ Q++ L+ KE +L+ N L I E +
Sbjct: 116 -NLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHH 174
Query: 176 LIDVG 180
VG
Sbjct: 175 QAAVG 179
>AK069331
Length = 284
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 111/177 (62%), Gaps = 20/177 (11%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGKVQL+RIEN ++RQVTF KRR+GLLKKA E+S+LC+A++ +IIFS GKLY+ AT
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 GTMEELIERYK-----------SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYI 109
M++++ERY+ + S Q N C + R LK ++ +QK +++
Sbjct: 61 SCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRK--------LKAKVETIQKCQKHL 112
Query: 110 YGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEIL 166
G E + ++EL LE+ LE + +IRS K Q+M++ I L+ KE L+ N++L
Sbjct: 113 MGEDL-ESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVL 168
>Os02g0731200 Transcription factor MADS57
Length = 241
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 107/165 (64%), Gaps = 5/165 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK+ +RRI+N RQVTF KRR GLLKKA+ELSILC+A++G+++FS+ G+LY+ ++T
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 GTMEELIERYKSASGE--QANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHM 118
M+ +I+RY +A E NA + ++ ++EA L+Q+++ LQ+ + + G + +
Sbjct: 61 -NMKTVIDRYTNAKEELLGGNATSEIKI-WQREAASLRQQLHNLQESHKQLMGEELS-GL 117
Query: 119 TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAAN 163
V +L LE LEI + NIR K ++ EI+ L K ++ N
Sbjct: 118 GVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQEN 162
>Os07g0108900 MADS15 protein
Length = 267
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 115/176 (65%), Gaps = 4/176 (2%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGKVQL+RIEN ++RQVTF KRR GLLKKA E+S+LC+A++ I+FS GKLY+ AT
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 61 GTMEELIERYKSAS-GEQA--NACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEH 117
M++++ERY+ S E+A +A + + E LK +I +QK +++ G E
Sbjct: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDL-ES 119
Query: 118 MTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQ 173
+ ++EL LE+ LE + +I S K +M++ I L+ KE L+ N+ LQ+++VE+
Sbjct: 120 LNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVER 175
>Os08g0531700 Similar to Developmental protein SEPALLATA2 (Agamous-like MADS box
protein AGL4)
Length = 310
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 39/213 (18%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ +T
Sbjct: 27 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 86
Query: 61 GTMEELIERYKSAS--GEQA---NACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRAN 115
+M + +E+Y+ S G + N +Q + E + LK + LQ+ R Y ++
Sbjct: 87 QSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRQYYKSKHR 146
Query: 116 ----------------------------------EHMTVEELNALERYLEIWMYNIRSAK 141
+ + ++EL +LE+ L+ + ++R+ +
Sbjct: 147 LCLVRSKVWNLVKIRDDVTEKLCMYERNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTR 206
Query: 142 MQIMIQEIQALKSKEGMLKAANEILQEKIVEQN 174
+ ++ ++ L+ KE M+ AN L+ K+ E N
Sbjct: 207 TKHLVDQLTELQRKEQMVSEANRCLRRKLEESN 239
>Os01g0201700 Similar to MADS box protein
Length = 154
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 78/108 (72%), Gaps = 4/108 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK++++RIEN +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ A
Sbjct: 41 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-N 99
Query: 61 GTMEELIERYKSASGEQANACGDQRMDP---KQEAMVLKQEINLLQKG 105
+++ +ERYK A+ + +N+ ++ +QE+ L+Q+I+ LQ
Sbjct: 100 NSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNA 147
>Os01g0883100 Similar to PISTILLATA-like MADS box protein
Length = 209
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 99/155 (63%), Gaps = 16/155 (10%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK++++RIEN +RQVTF KRR+G+LKKARE+S+LC+A++G++IFS+ GKLYD +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 61 GT-MEELIERYKSASGEQANACGDQRMDP-KQEAMVLKQEINLLQKGLRYIYGNRAN--- 115
T + ++E+Y++ SG+ D++ E +K+E + +Q LR++ G N
Sbjct: 61 KTSLSRILEKYQTNSGK---ILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQ 117
Query: 116 --EHMTVEE------LNALERYLEIWMYNIRSAKM 142
E + +EE +N ++ ++ W ++R+ KM
Sbjct: 118 PKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKM 152
>Os01g0726400 Transcription factor, MADS-box domain containing protein
Length = 196
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 96/156 (61%), Gaps = 5/156 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDL--A 58
M RG+ +++RIENP RQ TF KRR GL KKAREL++LC+AD+ +++FSA GKLY
Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSP 60
Query: 59 TTGTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHM 118
T ++ E +ERY++ + + A D R + + E + +LL+K LR++ + E+
Sbjct: 61 TVPSVREFVERYEATTHTKVWA--DIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEY- 117
Query: 119 TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKS 154
TV L ALE LE M +RS K + + EI L++
Sbjct: 118 TVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQN 153
>Os03g0186600 Transcription factor, MADS-box domain containing protein
Length = 248
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 101/182 (55%), Gaps = 27/182 (14%)
Query: 3 RGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGT 62
R ++ +RRI+N RQVTF KRR GL KKA ELSILC+A++G+++FSA GKL+ A+T +
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAST-S 80
Query: 63 MEELIERYKSAS--------------GEQANACGDQRMDPKQEAMVLKQEINLLQKGLRY 108
ME++I+RY S S GE ++ C LK+E+ LR
Sbjct: 81 MEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCAR-----------LKEELAETSLRLRQ 129
Query: 109 IYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQE 168
+ G + + VE+L LE+ LE + ++ K + ++ EI L+ K L N L+E
Sbjct: 130 MRGEELH-RLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKE 188
Query: 169 KI 170
++
Sbjct: 189 QV 190
>Os12g0501700 Transcription factor, MADS-box domain containing protein
Length = 233
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 105/181 (58%), Gaps = 27/181 (14%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGKVQ+RRIEN V RQVTF KRR GLLKKA E+++LC+ D+ I+FSA G L+ A++
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 61 -GTMEELIERYKSASGEQANACGDQRMD--PKQEAMV------LKQEINLLQKGLRYIYG 111
TME ++E+Y + + G+ ++ P+ E + L+ I L+K R + G
Sbjct: 61 HTTMERILEKYDR---HELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMG 117
Query: 112 NRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIV 171
+ +T++++ LE ++ + NIRS K ++++++ N IL++KI
Sbjct: 118 QELDS-LTLQDIQQLENQIDTSLNNIRSRKEKLLMEK--------------NTILEKKIT 162
Query: 172 E 172
E
Sbjct: 163 E 163
>Os06g0667200 MADS30
Length = 221
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 97/170 (57%), Gaps = 6/170 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M +GK++++RIE+ RQVTF KRRAG LKKA EL++LC+A +G+++FS GKL+D +
Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSP 60
Query: 61 GT-MEELIERYKSASGE---QANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANE 116
+ EL RY+ + Q D++M E L+ EI+ L+ LR G +
Sbjct: 61 PVILMELFHRYEITTRNTRLQETNRDDEQM--VMEITRLRNEIDQLEASLRRQTGEDLSS 118
Query: 117 HMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEIL 166
TV+EL+ L+ LE + + + K ++M Q+++ ++ + N L
Sbjct: 119 VSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFL 168
>Os05g0423400 Similar to PISTILLATA-like MADS box protein
Length = 215
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 106/180 (58%), Gaps = 15/180 (8%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK++++RIEN +RQVTF KRRAG+LKKARE+ +LC+A++G++IFS+ GKL D T
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTP 60
Query: 61 GT------MEELIERYKSASGEQANACGDQRMDP-KQEAMVLKQEINLLQKGLRYIYGNR 113
T + ++E+Y++ SG+ D++ E +K+E + +Q LR++ G
Sbjct: 61 KTTSVFPPLSRILEKYQTNSGK---ILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGED 117
Query: 114 ANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQ 173
N + +EL A+E L N+R M+ + K E ML+ +++L ++ +Q
Sbjct: 118 LNS-LQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDEHKMLAFRVHQQ 172
>Os04g0614100 Transcription factor, MADS-box domain containing protein
Length = 178
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 90/143 (62%), Gaps = 5/143 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RG+V+L++IENP +RQVTF KRR GLLKKA EL+ILC+A IG+I+FS GK+Y+ ++
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 61 G-TMEELIERY-KSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHM 118
+ + +RY K+ S QR+ QE +K E N L+ +R G+ +
Sbjct: 61 PWRIANIFDRYLKAPSTRFEEMDVQQRI--IQEMTRMKDENNRLRIIMRQYMGDDL-ASL 117
Query: 119 TVEELNALERYLEIWMYNIRSAK 141
T+++++ LE+ +E +Y +R K
Sbjct: 118 TLQDVSNLEQQIEFSLYKVRLRK 140
>Os02g0761000 Similar to Transcription factor MADS55
Length = 228
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 6/173 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
MAR + +++RIE+ RQVTF KRR GL KKA ELS+LC+AD+ +I+FS+ GKL A++
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
Query: 61 GTMEELIERYKSAS---GEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEH 117
+M E+I++Y + S G+ D ++ + A L +++ LR + G E
Sbjct: 61 -SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAH-LNEQLAEASLRLRQMRGEEL-EG 117
Query: 118 MTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKI 170
++++EL LE+ LE ++ + K Q +++I L+ K L N L+ ++
Sbjct: 118 LSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQV 170
>Os04g0461300 Transcription factor, MADS-box domain containing protein
Length = 94
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 68/100 (68%), Gaps = 6/100 (6%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK+ +RRI+N RQVTF KRR G+ KKA+EL+ILC+A++G++IFS+ G+LY+ A+T
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAST 60
Query: 61 GTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEIN 100
+M+ +I+RY A EQ + +P E V + N
Sbjct: 61 -SMKSVIDRYGRAKEEQQHV-----ANPNSELKVCLDDCN 94
>Os06g0712700 MADS-box protein SPW1
Length = 224
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 99/174 (56%), Gaps = 10/174 (5%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK++++RIEN +RQVT+ KRR G++KKAREL++LC+A + II+FS+ GK ++ +
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 61 GT-MEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMT 119
T ++ + +RY+ A G + ++ + Q + ++IN + LR R E +
Sbjct: 61 STDIKGIFDRYQQAIG---TSLWIEQYENMQRTLSHLKDIN---RNLRTEIRQRMGEDLD 114
Query: 120 ---VEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKI 170
+EL LE+ ++ + +R K ++ + + K K A E LQ+++
Sbjct: 115 GLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKKVKHSYEAYETLQQEL 168
>Os08g0494100
Length = 337
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M R K+ ++RIEN +RQVTF KRR GL+KKA ELS+LC+ D+ +++FS G+L +
Sbjct: 1 MGRVKLPIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDVALLMFSPSGRLSHFSGR 60
Query: 61 GTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTV 120
+E++I RY + S R + +QE +Q++ + + LR + A T
Sbjct: 61 RGVEDVILRYMNLSEHDRGEAIQNREEIQQEIYSSQQQLQITEDRLRMFEPDPA-AFGTS 119
Query: 121 EELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLIDVG 180
E++ E+YL + + K ++ + + ++ A+ Q + + +GL G
Sbjct: 120 SEVDGCEKYLMELLTRVVERKNNLLSSHMAPFDATTAAMQGADGT-QMYVSQADGLATFG 178
>Os06g0347700
Length = 74
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M RGK + RIEN RQVTF KRR+GL KKA+EL+ILC+A +G+++FS+ G+LYD + +
Sbjct: 1 MVRGKTVISRIENTTSRQVTFSKRRSGLFKKAKELAILCDAQVGVLVFSSTGRLYDYSNS 60
Query: 61 GTMEELIERYKSAS 74
+ E R+ S S
Sbjct: 61 SVVVE--SRWMSPS 72
>Os06g0217300 Similar to Transcription factor MADS55
Length = 223
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 8/175 (4%)
Query: 17 RQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGE 76
RQVTF KRR GL KKA EL++LC+AD+ +++FS+ GKL A++ M E+I++Y + S
Sbjct: 17 RQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASS-NMNEIIDKYTTHSKN 75
Query: 77 QANACGDQRMDPKQE---AMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIW 133
+D E L +++ LR + G E ++VEEL +E+ LE
Sbjct: 76 LGKTDKQPSIDLNLEHSKCSSLNEQLAEASLQLRQMRGEEL-EGLSVEELQQMEKNLEAG 134
Query: 134 MYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLIDVGMMVADQQN 188
+ + K Q +QEI L+ K L N L++++ + + G+ V D +N
Sbjct: 135 LQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQ---VPTAGLAVPDTEN 186
>Os01g0922800 Similar to MADS-box protein PTM5
Length = 164
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 15/145 (10%)
Query: 3 RGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGT 62
RG+VQLRRIE+ RQV F KRRAGL KKA EL++LC+ ++ +++FS GKLY+ +++ +
Sbjct: 4 RGRVQLRRIEDKASRQVRFSKRRAGLFKKAFELALLCDVEVALLVFSPVGKLYEYSSS-S 62
Query: 63 MEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINL-LQKGLRYIYG----NRANEH 117
+E +RY+ +G R D + + + + N + LR I N A+E
Sbjct: 63 IEGTYDRYQQFAG--------ARRDLNEGSTSINSDENASIHSRLRDITAWSLQNNADES 114
Query: 118 MTVEELNALERYLEIWMYNIRSAKM 142
+L LE+ L + + +S KM
Sbjct: 115 -DANQLEKLEKLLTNALRDTKSKKM 138
>Os06g0223300 Similar to TDR8 protein
Length = 360
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 51/70 (72%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
M R K+Q++RIEN +RQVTF KRR GL+KKA ELS+LC+ DI +++FS G+L +
Sbjct: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
Query: 61 GTMEELIERY 70
+E+++ RY
Sbjct: 61 RRIEDVLTRY 70
>Os09g0116800
Length = 208
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
+ R K+++RRIE+ RQV F KRRAG KKA ELSILC AD+ ++FS GK Y
Sbjct: 13 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHP 72
Query: 61 GTMEELIERYKSAS 74
++E L++R+ S+S
Sbjct: 73 -SVEFLLDRFLSSS 85
>Os01g0975800
Length = 208
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
+ R K+++RRIE+ RQV F KRRAG KKA ELSILC AD+ ++FS GK Y
Sbjct: 15 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHP 74
Query: 61 GTMEELIERY--KSASGEQAN 79
++E L+ER+ S+SG A
Sbjct: 75 -SVECLLERFLPDSSSGAAAR 94
>Os02g0104100
Length = 103
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 11 IENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGT 62
IE+ RQVTF KRR+GLLKKA ELS+LC+A++ +I+FS G+LY A+ +
Sbjct: 51 IEDATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPRGRLYQFASASS 102
>Os08g0531900 Similar to MADS box transcription factor-like protein (MADS-box
protein AGL72)
Length = 69
Score = 67.4 bits (163), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 43/55 (78%)
Query: 6 VQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
V+LRRIE+ RQV F KRR+GL KKA ELS+LC+A + +++FS G+LY+ A++
Sbjct: 13 VELRRIEDRTSRQVRFSKRRSGLFKKAYELSVLCDAQVALLVFSPAGRLYEFASS 67
>Os06g0108100
Length = 767
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 8 LRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLAT 59
+RRIE+ RQVTF KRR GLLKKA ELS+LC+A++ +++FS G+ + A+
Sbjct: 1 MRRIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPRGRFFHFAS 52
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,355,343
Number of extensions: 221894
Number of successful extensions: 759
Number of sequences better than 1.0e-10: 46
Number of HSP's gapped: 730
Number of HSP's successfully gapped: 46
Length of query: 222
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 125
Effective length of database: 11,971,043
Effective search space: 1496380375
Effective search space used: 1496380375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)