BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0753100 Os03g0753100|AK100227
(239 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0753100 Transcription factor, MADS-box domain containi... 434 e-122
Os03g0215400 Box protein (MADS box protein MADS1) 238 3e-63
Os06g0162800 MADS box protein 221 3e-58
Os09g0507200 MADS box protein 216 1e-56
Os02g0682200 Similar to MADS box protein 194 5e-50
Os04g0580700 MADS box transcription factor MADS17 190 8e-49
AF109153 190 8e-49
Os08g0531700 Similar to Developmental protein SEPALLATA2 (A... 190 8e-49
Os07g0605200 MADS box transcription factor 18 (OsMADS18) (M... 183 8e-47
Os03g0752800 MADS14 protein 178 3e-45
AK069331 175 2e-44
Os07g0108900 MADS15 protein 165 2e-41
Os01g0886200 Similar to AGAMOUS homolog 160 7e-40
Os12g0207000 Transcription factor 155 2e-38
Os02g0579600 Transcription factor MADS27 152 1e-37
Os05g0203800 Similar to MADS box protein 148 3e-36
Os10g0536100 Transcription factor MADS56 141 3e-34
AF141965 140 1e-33
Os02g0731200 Transcription factor MADS57 138 3e-33
Os03g0122600 Transcription factor, MADS-box domain containi... 136 2e-32
Os12g0501700 Transcription factor, MADS-box domain containi... 135 3e-32
Os04g0304400 Similar to MADS-box protein AGL16-II 135 3e-32
Os08g0431900 Transcription factor MADS23 129 2e-30
Os08g0112700 Similar to TAGL12 transcription factor 126 1e-29
Os02g0170300 Similar to MADS box protein ZMM17 125 2e-29
Os12g0206800 Transcription factor, MADS-box domain containi... 122 2e-28
Os06g0667200 MADS30 113 1e-25
Os06g0712700 MADS-box protein SPW1 110 7e-25
Os01g0883100 Similar to PISTILLATA-like MADS box protein 110 8e-25
Os01g0201700 Similar to MADS box protein 108 4e-24
Os03g0186600 Transcription factor, MADS-box domain containi... 107 1e-23
Os02g0761000 Similar to Transcription factor MADS55 106 2e-23
Os04g0461300 Transcription factor, MADS-box domain containi... 106 2e-23
Os04g0614100 Transcription factor, MADS-box domain containi... 102 3e-22
Os05g0423400 Similar to PISTILLATA-like MADS box protein 99 2e-21
Os08g0494100 97 8e-21
Os01g0922800 Similar to MADS-box protein PTM5 97 1e-20
Os06g0217300 Similar to Transcription factor MADS55 91 9e-19
Os06g0223300 Similar to TDR8 protein 90 1e-18
Os02g0104100 86 2e-17
Os08g0531900 Similar to MADS box transcription factor-like ... 86 2e-17
Os06g0347700 86 2e-17
Os01g0726400 Transcription factor, MADS-box domain containi... 85 4e-17
Os05g0203600 Transcription factor, MADS-box domain containi... 77 8e-15
Os06g0108100 77 1e-14
Os06g0503500 74 9e-14
Os09g0116800 73 2e-13
Os01g0975800 73 2e-13
Os02g0164450 68 5e-12
Os12g0407000 68 6e-12
>Os03g0753100 Transcription factor, MADS-box domain containing protein
Length = 239
Score = 434 bits (1115), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/239 (89%), Positives = 215/239 (89%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL
Sbjct: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEAA 180
ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEAA
Sbjct: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEAA 180
Query: 181 PPQPPWXXXXXXXXXXXXXVFSSEPPQPEHFFQALGLHAVDVNQXXXXXXXXXXXEWMA 239
PPQPPW VFSSEPPQPEHFFQALGLHAVDVNQ EWMA
Sbjct: 181 PPQPPWNGNCSNGHGGGGGVFSSEPPQPEHFFQALGLHAVDVNQPPAPPPGGYPPEWMA 239
>Os03g0215400 Box protein (MADS box protein MADS1)
Length = 257
Score = 238 bits (607), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/178 (69%), Positives = 143/178 (80%), Gaps = 3/178 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGKV L+RIENKISRQVTFAKRRNGLLKKAYELS+LCDAEVAL++FS GRL++FSSS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
S M KTLERY+ Y SQDAAAP E + NYQEY+ LK VE LQ +QRN+LGEDL PL
Sbjct: 61 SCMYKTLERYRSCNYNSQDAAAP---ENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPL 117
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVE 178
+ ELEQLE+Q+ +LKQIRSRK Q LLD+L DLK KEQ LQD N+ L++KL E E
Sbjct: 118 SMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAE 175
>Os06g0162800 MADS box protein
Length = 225
Score = 221 bits (563), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 141/180 (78%), Gaps = 3/180 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGKV L+RIENKISRQVTFAKRRNGLLKKAYELS+LCDAEVAL++FS GRL++FS+S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 SNMLKTLERYQ--RYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLA 118
S M KTLERY+ Y S +A+A E+ +NYQEY+ LK VE LQ +QRNLLGEDL
Sbjct: 61 SCMYKTLERYRSCNYNLNSCEASAALETEL-SNYQEYLKLKTRVEFLQTTQRNLLGEDLV 119
Query: 119 PLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVE 178
PL+ ELEQLE+Q+ +L IRS K Q LLD++ +LKRKEQ LQDAN+ LKRK+ E E
Sbjct: 120 PLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGE 179
>Os09g0507200 MADS box protein
Length = 248
Score = 216 bits (549), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 139/176 (78%), Gaps = 2/176 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRG+V L+RIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVAL++FS+ G+LY+F S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDE--MQNNYQEYVNLKAHVEILQQSQRNLLGEDLA 118
+M +TLERYQ++ Y D A + +Q++ EY+ LKA VE LQ++QRNLLGEDL
Sbjct: 61 QSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLG 120
Query: 119 PLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
L ELEQLE Q+ +L+ IRS +TQ +LD+L DL+R+EQML +AN+ L+RKL+E
Sbjct: 121 TLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEE 176
>Os02g0682200 Similar to MADS box protein
Length = 250
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 132/173 (76%), Gaps = 2/173 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
+ KTLERYQ Y +QD+ S E Q+ Y E LKA E LQ++QR+LLGEDL PL
Sbjct: 61 G-ITKTLERYQHCCYNAQDSNNALS-ETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPL 118
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 173
+ EL+QLE Q+ L Q R RKTQ++++++ +L+RKE+ L + NR LK KL+
Sbjct: 119 SVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLE 171
>Os04g0580700 MADS box transcription factor MADS17
Length = 254
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 133/174 (76%), Gaps = 2/174 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F S+
Sbjct: 6 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 65
Query: 61 SNMLKTLERYQRYIYASQDA-AAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP 119
+ KTLE+Y Y +Q + +A E Q+ YQE LK +E LQ+SQR++LGEDL P
Sbjct: 66 G-INKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 124
Query: 120 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 173
L+ EL+QLE Q+ +L Q R RKTQ++++++ DL+RKE+ L + N+ LK KL+
Sbjct: 125 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLE 178
>AF109153
Length = 249
Score = 190 bits (482), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 133/174 (76%), Gaps = 2/174 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 SNMLKTLERYQRYIYASQDA-AAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP 119
+ KTLE+Y Y +Q + +A E Q+ YQE LK +E LQ+SQR++LGEDL P
Sbjct: 61 G-INKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 119
Query: 120 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 173
L+ EL+QLE Q+ +L Q R RKTQ++++++ DL+RKE+ L + N+ LK KL+
Sbjct: 120 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLE 173
>Os08g0531700 Similar to Developmental protein SEPALLATA2 (Agamous-like MADS box
protein AGL4)
Length = 310
Score = 190 bits (482), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 140/211 (66%), Gaps = 37/211 (17%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRG+V L+RIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVAL++FS+ G+LY+F S+
Sbjct: 27 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 86
Query: 61 SNMLKTLERYQRYIYASQDAAAPT--SDEMQNNYQEYVNLKAHVEILQQSQ--------- 109
+M KTLE+YQ+ YA + A S++++ + EY+ LKA VE LQ++Q
Sbjct: 87 QSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRQYYKSKHR 146
Query: 110 --------------------------RNLLGEDLAPLATNELEQLESQVVRTLKQIRSRK 143
RNLLGEDL L ELE LE Q+ +LK +R+ +
Sbjct: 147 LCLVRSKVWNLVKIRDDVTEKLCMYERNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTR 206
Query: 144 TQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
T+ L+D+L +L+RKEQM+ +ANR L+RKL+E
Sbjct: 207 TKHLVDQLTELQRKEQMVSEANRCLRRKLEE 237
>Os07g0605200 MADS box transcription factor 18 (OsMADS18) (MADS box protein 2)
(MADS box protein 28) (FDRMADS7)
Length = 249
Score = 183 bits (465), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 130/173 (75%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRG V L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDA+VAL++FS G+LY+FSS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
S+M LERYQRY + + P +++ +N EY LK+ ++ LQ+SQR LLGE L L
Sbjct: 61 SSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTL 120
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 173
EL+QLE Q+ +LK IRS+K Q+L + + +L++KE+ L++ N VL++ ++
Sbjct: 121 TIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLME 173
>Os03g0752800 MADS14 protein
Length = 246
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 133/172 (77%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGKV L+RIENKI+RQVTF+KRR+GLLKKA E+S+LCDAEVAL++FS G+LY++++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
S M K LERY+RY YA + + SD N EY LKA VE +Q+ Q++L+GEDL L
Sbjct: 61 SCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESL 120
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKL 172
EL+QLE Q+ +LK IRSRK+Q++L+ + +L+RKE+ LQ+ N+VL+++L
Sbjct: 121 NLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKEL 172
>AK069331
Length = 284
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 129/168 (76%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGKV L+RIENKI+RQVTF+KRR+GLLKKA E+S+LCDAEVAL++FS G+LY++++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
S M K LERY+RY YA + + SD N EY LKA VE +Q+ Q++L+GEDL L
Sbjct: 61 SCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESL 120
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVL 168
EL+QLE Q+ +LK IRSRK+Q++L+ + +L+RKE+ LQ+ N+VL
Sbjct: 121 NLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVL 168
>Os07g0108900 MADS15 protein
Length = 267
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 130/174 (74%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA ++FS G+LY++++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
S M K LERY+RY YA + + S+ N EY LKA +E +Q+ ++L+GEDL L
Sbjct: 61 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESL 120
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
EL+QLE Q+ +LK I SRK+ ++L+ + +L++KE+ LQ+ N+ L+++L E
Sbjct: 121 NLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174
>Os01g0886200 Similar to AGAMOUS homolog
Length = 265
Score = 160 bits (405), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGK+ ++RIENK SRQVTF KRRNGLLKKAYEL+ILCDAE+AL++FS GRLY+FS+
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNY--QEYVNLKAHVEILQQSQRNLLGEDLA 118
++ T+ERY++ AS +AP D + Y QE ++ ++ LQ + R+L+GE +
Sbjct: 61 NSTRSTIERYKK-ASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIG 119
Query: 119 PLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEID 176
+ EL+ LE+++ + + +IRS+K ++L E+ ++++E LQ+ N L+ K+ E +
Sbjct: 120 NMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAE 177
>Os12g0207000 Transcription factor
Length = 270
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 125/176 (71%), Gaps = 2/176 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRG++ ++RIEN SRQVTF KRRNGLLKKAYELS+LCDAEVAL++FS GRLY++S++
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNY--QEYVNLKAHVEILQQSQRNLLGEDLA 118
+N+ T++RY++ + AP + Y QE L+ +++LQ + ++L+G++++
Sbjct: 61 NNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVS 120
Query: 119 PLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
L+ EL+QLES++ + + +IR+RK ++L E+ + ++E LQ+ N L+ K+ E
Sbjct: 121 NLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAE 176
>Os02g0579600 Transcription factor MADS27
Length = 240
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGK+V++RI+N SRQVTF+KRRNG+ KKA EL+ILCDAEV L++FS GRLY++SS+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
S M ++RY + Q A P S E++ +E +L+ + LQ++ R L+GEDL+ L
Sbjct: 61 S-MKSVIDRYGKSKDEQQAVANPNS-ELKFWQREAASLRQQLHNLQENHRQLMGEDLSGL 118
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEAA 180
EL+ LE+Q+ +L+ +R++K VL+DE+ +L RK ++ N L +K+ I E A
Sbjct: 119 NVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENA 178
>Os05g0203800 Similar to MADS box protein
Length = 233
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 119/172 (69%), Gaps = 1/172 (0%)
Query: 3 RGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSN 62
RGK+ ++RIEN +RQVTF KRR+GLLKKAYELS+LCDAEVALV+FS GRLY++S++S
Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS- 103
Query: 63 MLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLAT 122
+ +T+ERY++ + +A+ Q+ QE LK + LQ S R L+G+++ +
Sbjct: 104 VKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNH 163
Query: 123 NELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
EL+QLE ++ + L +IR+RK ++L E+ ++R+E LQ+ N LK K+ E
Sbjct: 164 RELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAE 215
>Os10g0536100 Transcription factor MADS56
Length = 230
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 114/171 (66%), Gaps = 1/171 (0%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
M RG+ L+RIEN SRQVTF+KRRNGLLKKA+ELS+LCDAEVAL++FS GRLY+F+S+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
++ KT++RY+ Y + D +Q + + L +E L +S+R +LGE+L
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQD-IQQVKDDTLGLAKKLEALDESRRKILGENLEGF 119
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRK 171
+ EL LE ++ ++L +IR +KT++L ++ LK KE+ L N L+ K
Sbjct: 120 SIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
>AF141965
Length = 233
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%), Gaps = 1/171 (0%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
M RG+ L+RIEN SRQVTF+KRRNGLLKKA+ELS+LCDAEVAL++FS GRLY+F+S+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
++ KT++RY+ Y + D +Q + + L +E L +S+R +LGE+L
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQD-IQQVKDDTLGLAKKLEALDESRRKILGENLEGC 119
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRK 171
+ EL LE ++ ++L IR +KT++L ++ LK KE+ L N L+ K
Sbjct: 120 SIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGK 170
>Os02g0731200 Transcription factor MADS57
Length = 241
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 116/174 (66%), Gaps = 5/174 (2%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGK+V++RI+N SRQVTF+KRRNGLLKKA ELSILCDAEV LV+FS GRLY+FSS+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 SNMLKTLERYQRYIYASQD-AAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP 119
+ +KT+ RY A ++ + E++ +E +L+ + LQ+S + L+GE+L+
Sbjct: 61 N--MKTV--IDRYTNAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSG 116
Query: 120 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 173
L +L+ LE+++ +L+ IR RK +L E+ +L K ++ N L R L+
Sbjct: 117 LGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLN 170
>Os03g0122600 Transcription factor, MADS-box domain containing protein
Length = 230
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 110/171 (64%), Gaps = 2/171 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
M RGK ++RIEN SRQVTF+KRRNGLLKKA+ELS+LCDAEVAL++FS G+LY+F+S+
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
S KT+ERY+ Y + D ++ + L +E L+ +R LLGE L
Sbjct: 61 STQ-KTIERYRTYTKENIGNKTVQQD-IEQVKADADGLAKKLEALETYKRKLLGEKLDEC 118
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRK 171
+ EL LE ++ R+L IR RKT++L +++ L+ KE L+ N L+ K
Sbjct: 119 SIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREK 169
>Os12g0501700 Transcription factor, MADS-box domain containing protein
Length = 233
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 127/196 (64%), Gaps = 25/196 (12%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGKV ++RIEN++SRQVTF+KRR GLLKKA+E+++LCD +VA ++FS G L+ ++SS
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 61 -SNMLKTLERYQRY-IYASQDAAAPTSDEMQNNYQ-EYVNLKAHVEILQQSQRNLLGEDL 117
+ M + LE+Y R+ + + + E++ + +++ L+ +E L++SQRNL+G++L
Sbjct: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQEL 120
Query: 118 APLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEID- 176
L +++QLE+Q+ +L IRS RKE++L + N +L++K+ E++
Sbjct: 121 DSLTLQDIQQLENQIDTSLNNIRS--------------RKEKLLMEKNTILEKKITELET 166
Query: 177 ----VEAAPPQ---PP 185
+ A+P + PP
Sbjct: 167 LHTCIRASPTKAAAPP 182
>Os04g0304400 Similar to MADS-box protein AGL16-II
Length = 227
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 2/173 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGK+ ++RI+N ++RQVTF+KRR GL+KKA EL+ILCDA+V L++FS GRLY FSSS
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
S M +ERYQ P S E + +E L+ V+ L + R LLGE+++
Sbjct: 61 S-MKSIIERYQEAGEEHCRLLNPMS-EAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNF 118
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 173
+L+ L++QV +L IR++K Q+L +E+ L K ++Q N L++K +
Sbjct: 119 TVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFN 171
>Os08g0431900 Transcription factor MADS23
Length = 159
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 103/159 (64%), Gaps = 6/159 (3%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGK+ ++RI+N SRQVTF+KRR+GL KKA ELSILCDAEV L++FS RLY F+SS
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
Query: 61 SNMLKTLERYQRYIYASQD--AAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLA 118
S M +ERY +D S E + QE +L+ + LQ+ R LLG+ L+
Sbjct: 61 S-MKSIIERYNE---TKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLS 116
Query: 119 PLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRK 157
L +L+ LES++ +LK IR RK V++D++ +L RK
Sbjct: 117 GLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
>Os08g0112700 Similar to TAGL12 transcription factor
Length = 222
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 8/182 (4%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
M RGKV L+RIEN + RQVTF KRR GLLKKA ELSILC+A++ +++FS G+LY +++
Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP- 119
M + +ERY+ AS + A D+ + QE + LK + +LQ+ R + G
Sbjct: 61 GTMEELIERYKS---ASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEH 117
Query: 120 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE----I 175
+ EL LE + + IRS K Q+++ E+ LK KE ML+ AN +L+ K+ E I
Sbjct: 118 MTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQNGLI 177
Query: 176 DV 177
DV
Sbjct: 178 DV 179
>Os02g0170300 Similar to MADS box protein ZMM17
Length = 260
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 111/181 (61%), Gaps = 5/181 (2%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGK+ ++RIEN +RQVTF+KRR GLLKKA EL++LCDA V +V+FS G+++++ S
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 SNMLKTL-ERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP 119
+ L+ L E YQ + + Q + E ++ +E L R G+DL+
Sbjct: 61 TCSLRELIEHYQTVTNTHFEEI----NHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSN 116
Query: 120 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEA 179
L ++ LE Q+ ++ ++R+RK Q+L +L +L+RKE +L+D N L R ++E +A
Sbjct: 117 LTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHHQA 176
Query: 180 A 180
A
Sbjct: 177 A 177
>Os12g0206800 Transcription factor, MADS-box domain containing protein
Length = 202
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
M RGKV ++RIEN + RQVTF KRR GLLKKA ELS+LCDA+V +++FS G+L++ +++
Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVN-LKAHVEILQQSQRNLLGEDLAP 119
NM +ERYQ + Q P + + Q ++ + L+ +++LQ+ R+ G
Sbjct: 61 GNMHNLVERYQSNVAGGQ--MEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGE 118
Query: 120 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE----- 174
+ ++L LE + + QIR+ K Q++ E+ L+ KE +L++AN +L+ K+ E
Sbjct: 119 MTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKEQQKLY 178
Query: 175 ---IDVEAAPPQPP 185
+D+ + P P
Sbjct: 179 MSLLDLHSQQPTQP 192
>Os06g0667200 MADS30
Length = 221
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 109/177 (61%), Gaps = 4/177 (2%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MG+GK+ ++RIE+ RQVTF+KRR G LKKA EL++LCDA+V +V+FS G+L+ F S
Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSP 60
Query: 61 SNMLKTLERYQRY-IYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP 119
+L +E + RY I T+ + + E L+ ++ L+ S R GEDL+
Sbjct: 61 PVIL--MELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSS 118
Query: 120 LAT-NELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEI 175
++T +EL QL+ Q+ +L ++ +RK +++ +L D++R Q + + N L R + +I
Sbjct: 119 VSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLCRMVTKI 175
>Os06g0712700 MADS-box protein SPW1
Length = 224
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 106/180 (58%), Gaps = 20/180 (11%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGK+ ++RIEN +RQVT++KRR G++KKA EL++LCDA+VA+++FS G+ ++F S
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 61 SNMLKTL-ERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNL------- 112
S +K + +RYQ+ I S ++Y N++ + L+ RNL
Sbjct: 61 STDIKGIFDRYQQAIGTSLWI------------EQYENMQRTLSHLKDINRNLRTEIRQR 108
Query: 113 LGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKL 172
+GEDL L +EL LE V LK++R RK V+ + K+K + +A L+++L
Sbjct: 109 MGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKKVKHSYEAYETLQQEL 168
>Os01g0883100 Similar to PISTILLATA-like MADS box protein
Length = 209
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 107/179 (59%), Gaps = 12/179 (6%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSS- 59
MGRGK+ ++RIEN +RQVTF+KRR+G+LKKA E+S+LCDAEV +V+FS AG+LY + S
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 60 SSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVN-LKAHVEILQQSQRNLLGEDLA 118
+++ + LE+YQ ++ DE + ++ +K + +Q R+L GEDL
Sbjct: 61 KTSLSRILEKYQ------TNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLN 114
Query: 119 PLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDV 177
L EL +E + + + + L+D R ++ML+D N++L KL + D+
Sbjct: 115 SLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKLHQQDI 169
>Os01g0201700 Similar to MADS box protein
Length = 154
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGK+ ++RIEN +RQVTF KRRNGLLKKAYELS+LCDAEVAL++FS GRLY+++++
Sbjct: 41 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 100
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQS 108
S + T+ERY++ + ++ Q+ QE L+ + LQ +
Sbjct: 101 S-VKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNA 147
>Os03g0186600 Transcription factor, MADS-box domain containing protein
Length = 248
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Query: 3 RGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSN 62
R ++ ++RI+N +RQVTF+KRR GL KKA ELSILCDAEV LV+FS G+L+QF+S+S
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTS- 80
Query: 63 MLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLAT 122
M + ++RY + Q A D + LK + R + GE+L L
Sbjct: 81 MEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNV 140
Query: 123 NELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEID-VEAAP 181
+L++LE + L + K++ +LDE+ L+RK L + N LK ++ + +E
Sbjct: 141 EQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQVSRMSRMEEMQ 200
Query: 182 PQP 184
P P
Sbjct: 201 PGP 203
>Os02g0761000 Similar to Transcription factor MADS55
Length = 228
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
M R + ++RIE+ +RQVTF+KRR GL KKA ELS+LCDA+VAL++FS G+L F+SS
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
S M + +++Y + A P+ D + + +Y +L + R + GE+L L
Sbjct: 61 S-MNEIIDKYNTHSNNLGKAEQPSLD-LNLEHSKYAHLNEQLAEASLRLRQMRGEELEGL 118
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEI 175
+ +EL+QLE + L ++ K Q ++++ +L+RK L + N L+ ++ +I
Sbjct: 119 SIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQI 173
>Os04g0461300 Transcription factor, MADS-box domain containing protein
Length = 94
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGK+V++RI+N SRQVTF+KRRNG+ KKA EL+ILCDAEV LV+FS GRLY+++S+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAST 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSD 86
S M ++RY R Q A P S+
Sbjct: 61 S-MKSVIDRYGRAKEEQQHVANPNSE 85
>Os04g0614100 Transcription factor, MADS-box domain containing protein
Length = 178
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 13/148 (8%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRG+V L++IEN +RQVTF+KRR GLLKKA EL+ILCDA++ +++FS G++Y++SS
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTS-----DEMQNNYQEYVNLKAHVEILQQSQRNLLGE 115
+ + + RY+ AP++ D Q QE +K L+ R +G+
Sbjct: 61 PWRIANI--FDRYL------KAPSTRFEEMDVQQRIIQEMTRMKDENNRLRIIMRQYMGD 112
Query: 116 DLAPLATNELEQLESQVVRTLKQIRSRK 143
DLA L ++ LE Q+ +L ++R RK
Sbjct: 113 DLASLTLQDVSNLEQQIEFSLYKVRLRK 140
>Os05g0423400 Similar to PISTILLATA-like MADS box protein
Length = 215
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 104/185 (56%), Gaps = 17/185 (9%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRGK+ ++RIEN +RQVTF+KRR G+LKKA E+ +LCDAEV +V+FS AG+L + +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTP 60
Query: 61 SN------MLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVN-LKAHVEILQQSQRNLL 113
+ + LE+YQ ++ DE + ++ +K + +Q R++
Sbjct: 61 KTTSVFPPLSRILEKYQ------TNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMK 114
Query: 114 GEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 173
GEDL L EL +E + +R + ++D KR E+ML+D +++L ++
Sbjct: 115 GEDLNSLQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDEHKMLAFRVH 170
Query: 174 EIDVE 178
+ +VE
Sbjct: 171 QQEVE 175
>Os08g0494100
Length = 337
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGR K+ ++RIEN +RQVTF+KRRNGL+KKAYELS+LCD +VAL++FS +GRL FS
Sbjct: 1 MGRVKLPIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDVALLMFSPSGRLSHFSGR 60
Query: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
+ + RY + A +E+Q QE + + ++I + R + A
Sbjct: 61 RGVEDVILRYMNLSEHDRGEAIQNREEIQ---QEIYSSQQQLQITEDRLRMFEPDPAAFG 117
Query: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDAN 165
++E++ E ++ L ++ RK +L + +Q A+
Sbjct: 118 TSSEVDGCEKYLMELLTRVVERKNNLLSSHMAPFDATTAAMQGAD 162
>Os01g0922800 Similar to MADS-box protein PTM5
Length = 164
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 89/142 (62%), Gaps = 9/142 (6%)
Query: 3 RGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSN 62
RG+V L+RIE+K SRQV F+KRR GL KKA+EL++LCD EVAL++FS G+LY++SSSS
Sbjct: 4 RGRVQLRRIEDKASRQVRFSKRRAGLFKKAFELALLCDVEVALLVFSPVGKLYEYSSSS- 62
Query: 63 MLKTLERYQRYIYASQD-AAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLA 121
+ T +RYQ++ A +D TS N + L+ +I S +N E A
Sbjct: 63 IEGTYDRYQQFAGARRDLNEGSTSINSDENASIHSRLR---DITAWSLQNNADESDA--- 116
Query: 122 TNELEQLESQVVRTLKQIRSRK 143
N+LE+LE + L+ +S+K
Sbjct: 117 -NQLEKLEKLLTNALRDTKSKK 137
>Os06g0217300 Similar to Transcription factor MADS55
Length = 223
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
Query: 16 SRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIY 75
+RQVTF+KRR GL KKA EL++LCDA+VALV+FS G+L QF +SSNM + +++Y +
Sbjct: 16 ARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQF-ASSNMNEIIDKYTTHSK 74
Query: 76 ASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRT 135
S ++ + + +L + R + GE+L L+ EL+Q+E +
Sbjct: 75 NLGKTDKQPSIDLNLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAG 134
Query: 136 LKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEI 175
L+++ K Q + E+ +L+RK L + N L+ ++ ++
Sbjct: 135 LQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQV 174
>Os06g0223300 Similar to TDR8 protein
Length = 360
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 54/70 (77%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGR K+ ++RIEN +RQVTF+KRRNGL+KKAYELS+LCD ++AL++FS +GRL FS
Sbjct: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFSGR 60
Query: 61 SNMLKTLERY 70
+ L RY
Sbjct: 61 RRIEDVLTRY 70
>Os02g0104100
Length = 103
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 48/52 (92%)
Query: 11 IENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSN 62
IE+ SRQVTF+KRR+GLLKKA+ELS+LCDAEVAL++FS GRLYQF+S+S+
Sbjct: 51 IEDATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPRGRLYQFASASS 102
>Os08g0531900 Similar to MADS box transcription factor-like protein (MADS-box
protein AGL72)
Length = 69
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 52/57 (91%)
Query: 6 VVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSN 62
V L+RIE++ SRQV F+KRR+GL KKAYELS+LCDA+VAL++FS AGRLY+F+SS++
Sbjct: 13 VELRRIEDRTSRQVRFSKRRSGLFKKAYELSVLCDAQVALLVFSPAGRLYEFASSTS 69
>Os06g0347700
Length = 74
Score = 85.9 bits (211), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/66 (60%), Positives = 54/66 (81%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
M RGK V+ RIEN SRQVTF+KRR+GL KKA EL+ILCDA+V +++FS GRLY +S+S
Sbjct: 1 MVRGKTVISRIENTTSRQVTFSKRRSGLFKKAKELAILCDAQVGVLVFSSTGRLYDYSNS 60
Query: 61 SNMLKT 66
S ++++
Sbjct: 61 SVVVES 66
>Os01g0726400 Transcription factor, MADS-box domain containing protein
Length = 196
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 7/157 (4%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGRG+ ++RIEN RQ TF KRR+GL KKA EL++LCDA++ L+LFS +G+LY F S
Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSP 60
Query: 61 S--NMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLA 118
+ ++ + +ERY+ + A D Q E + + ++L++ R + +D
Sbjct: 61 TVPSVREFVERYEATTHTKVWA-----DIRQERRAELEKVGSMCDLLEKQLRFMTVDDGE 115
Query: 119 PLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLK 155
LE LE + ++++RS K + + E+C L+
Sbjct: 116 EYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQ 152
>Os05g0203600 Transcription factor, MADS-box domain containing protein
Length = 100
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 11 IENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
IE+ RQVTF KR NGLLKKAYELS+LCDAEVAL++FS GRLY++S++
Sbjct: 36 IEDTADRQVTFCKRCNGLLKKAYELSMLCDAEVALIVFSSRGRLYEYSNN 85
>Os06g0108100
Length = 767
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 44/53 (83%)
Query: 8 LQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
++RIE+ RQVTF+KRR GLLKKA ELS+LCDAEVAL++FS GR + F+S+
Sbjct: 1 MRRIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPRGRFFHFASA 53
>Os06g0503500
Length = 210
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFS 58
+GR ++ ++RI+N RQVTF+KRRNGL KKA ELS LC A VA+V FS AG ++ F
Sbjct: 10 LGRQRIEIRRIDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFAFG 67
>Os09g0116800
Length = 208
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
+GR K+ ++RIE++ +RQV F+KRR G KKA ELSILC A+VA V+FS AG+ Y F
Sbjct: 13 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHP 72
Query: 61 S 61
S
Sbjct: 73 S 73
>Os01g0975800
Length = 208
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
+GR K+ ++RIE++ +RQV F+KRR G KKA ELSILC A+VA V+FS AG+ Y F
Sbjct: 15 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHP 74
Query: 61 S 61
S
Sbjct: 75 S 75
>Os02g0164450
Length = 286
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 2 GRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSS 61
GR ++ ++ IENK +RQV F+KRR G+ KKA ELS+LC A VA+V FS AGR + F S
Sbjct: 23 GRQRIEMKLIENKEARQVCFSKRREGVFKKASELSVLCGARVAVVFFSPAGRPHCFGHPS 82
>Os12g0407000
Length = 194
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%)
Query: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
MGR ++ ++RI+NK RQVTF KRR GL KKA EL++L A VA+V+FS A +Y F
Sbjct: 10 MGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHVYAFGHP 69
Query: 61 S 61
S
Sbjct: 70 S 70
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.131 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,745,862
Number of extensions: 244232
Number of successful extensions: 1008
Number of sequences better than 1.0e-10: 50
Number of HSP's gapped: 971
Number of HSP's successfully gapped: 50
Length of query: 239
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 141
Effective length of database: 11,918,829
Effective search space: 1680554889
Effective search space used: 1680554889
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 154 (63.9 bits)