BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0761000 Os02g0761000|AK070121
(228 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0761000 Similar to Transcription factor MADS55 427 e-120
Os06g0217300 Similar to Transcription factor MADS55 302 2e-82
Os03g0186600 Transcription factor, MADS-box domain containi... 217 6e-57
Os02g0579600 Transcription factor MADS27 145 3e-35
AF109153 140 7e-34
Os04g0580700 MADS box transcription factor MADS17 140 7e-34
Os08g0431900 Transcription factor MADS23 140 8e-34
Os02g0682200 Similar to MADS box protein 131 3e-31
Os06g0162800 MADS box protein 131 4e-31
Os02g0731200 Transcription factor MADS57 129 2e-30
Os07g0605200 MADS box transcription factor 18 (OsMADS18) (M... 129 2e-30
Os10g0536100 Transcription factor MADS56 127 5e-30
AF141965 125 3e-29
Os04g0304400 Similar to MADS-box protein AGL16-II 123 1e-28
Os03g0215400 Box protein (MADS box protein MADS1) 120 8e-28
Os09g0507200 MADS box protein 119 1e-27
Os05g0203800 Similar to MADS box protein 118 3e-27
Os03g0122600 Transcription factor, MADS-box domain containi... 118 3e-27
Os01g0886200 Similar to AGAMOUS homolog 114 5e-26
Os12g0207000 Transcription factor 113 9e-26
Os08g0531700 Similar to Developmental protein SEPALLATA2 (A... 113 1e-25
Os12g0501700 Transcription factor, MADS-box domain containi... 112 2e-25
Os06g0712700 MADS-box protein SPW1 107 1e-23
Os02g0170300 Similar to MADS box protein ZMM17 106 1e-23
Os03g0753100 Transcription factor, MADS-box domain containi... 106 1e-23
Os03g0752800 MADS14 protein 103 7e-23
Os01g0883100 Similar to PISTILLATA-like MADS box protein 103 1e-22
Os06g0667200 MADS30 102 2e-22
AK069331 102 2e-22
Os12g0206800 Transcription factor, MADS-box domain containi... 101 6e-22
Os07g0108900 MADS15 protein 100 7e-22
Os01g0726400 Transcription factor, MADS-box domain containi... 97 9e-21
Os05g0423400 Similar to PISTILLATA-like MADS box protein 97 1e-20
Os04g0461300 Transcription factor, MADS-box domain containi... 96 3e-20
Os08g0112700 Similar to TAGL12 transcription factor 94 6e-20
Os01g0201700 Similar to MADS box protein 92 4e-19
Os04g0614100 Transcription factor, MADS-box domain containi... 91 8e-19
Os08g0494100 87 1e-17
Os09g0116800 86 3e-17
Os06g0223300 Similar to TDR8 protein 85 4e-17
Os01g0922800 Similar to MADS-box protein PTM5 83 2e-16
Os06g0108100 81 8e-16
Os01g0975800 80 8e-16
Os06g0503500 79 2e-15
Os08g0531900 Similar to MADS box transcription factor-like ... 79 4e-15
Os06g0347700 77 1e-14
Os02g0104100 77 1e-14
Os02g0164450 74 1e-13
Os05g0303400 71 6e-13
Os12g0407000 70 2e-12
Os06g0333700 69 2e-12
>Os02g0761000 Similar to Transcription factor MADS55
Length = 228
Score = 427 bits (1098), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/228 (92%), Positives = 212/228 (92%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
Query: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI 120
SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI
Sbjct: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI 120
Query: 121 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQV 180
DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQV
Sbjct: 121 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQV 180
Query: 181 VDTENFVTEGQSSESVMTALHXXXXXXXXXXXXXXXXLKLGLPCGAWK 228
VDTENFVTEGQSSESVMTALH LKLGLPCGAWK
Sbjct: 181 VDTENFVTEGQSSESVMTALHSGSSQSQDNDDGSDVSLKLGLPCGAWK 228
>Os06g0217300 Similar to Transcription factor MADS55
Length = 223
Score = 302 bits (773), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/213 (74%), Positives = 177/213 (83%), Gaps = 4/213 (1%)
Query: 13 SAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKYNTH 72
SAAARQVTFSKRRRGLFKKAEEL+VLCDADVAL+VFSSTGKLS FASS+MNEIIDKY TH
Sbjct: 13 SAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTH 72
Query: 73 SNNLGKAE-QPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLE 131
S NLGK + QPS+DLNLEHSK + LNEQLAEASL+LRQMRGEELEGLS++ELQQ+EKNLE
Sbjct: 73 SKNLGKTDKQPSIDLNLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLE 132
Query: 132 AGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQVVDTENFVTE-G 190
AGL RV+ TKDQQFM++ISELQRK QLAEENM+LR+Q+ Q+ A V DTEN +TE G
Sbjct: 133 AGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPTAGLAVPDTENVLTEDG 192
Query: 191 QSSESVMTALHXXXXXXXXXXXXXXXXLKLGLP 223
QSSESVMTAL+ LKLGLP
Sbjct: 193 QSSESVMTALN--SGSSQDNDDGSDISLKLGLP 223
>Os03g0186600 Transcription factor, MADS-box domain containing protein
Length = 248
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/202 (58%), Positives = 153/202 (75%), Gaps = 3/202 (1%)
Query: 3 RERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSM 62
RER I+RI++ AARQVTFSKRRRGLFKKAEELS+LCDA+V L+VFS+TGKL FAS+SM
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81
Query: 63 NEIIDKYNTHSNNLGKAEQPSLDLNLEHSKY-AHLNEQLAEASLRLRQMRGEELEGLSID 121
+IID+YN+HS L +AE LDL E S A L E+LAE SLRLRQMRGEEL L+++
Sbjct: 82 EQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVE 141
Query: 122 ELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAE--KQ 179
+LQ+LEK+LE+GL V+ TK ++ +++I L+RK QL EEN++L+ QVS++S E +
Sbjct: 142 QLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQVSRMSRMEEMQP 201
Query: 180 VVDTENFVTEGQSSESVMTALH 201
D+E EGQSSESV A +
Sbjct: 202 GPDSEIVYEEGQSSESVTNASY 223
>Os02g0579600 Transcription factor MADS27
Length = 240
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 111/173 (64%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + I+RI+++ +RQVTFSKRR G+FKKA+EL++LCDA+V L++FSSTG+L ++S+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI 120
SM +ID+Y + P+ +L + A L +QL RQ+ GE+L GL++
Sbjct: 61 SMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNV 120
Query: 121 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQI 173
ELQ LE LE L V KD +++I EL RK S + +ENM+L ++S I
Sbjct: 121 KELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLI 173
>AF109153
Length = 249
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R R E+KRIE+ RQVTFSKRR GL KKA ELSVLCDA+VALI+FSS GKL F S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKY---AHLNEQLAEASLRLRQMRGEELEG 117
+N+ ++KYN+ N + +L S Y + L +L R M GE+L
Sbjct: 61 GINKTLEKYNSCCYN-AQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 119
Query: 118 LSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQV 170
LSI ELQQLEK LE L + K Q MEQ+ +L+RK QL E N QL+N++
Sbjct: 120 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 172
>Os04g0580700 MADS box transcription factor MADS17
Length = 254
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R R E+KRIE+ RQVTFSKRR GL KKA ELSVLCDA+VALI+FSS GKL F S+
Sbjct: 6 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 65
Query: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKY---AHLNEQLAEASLRLRQMRGEELEG 117
+N+ ++KYN+ N + +L S Y + L +L R M GE+L
Sbjct: 66 GINKTLEKYNSCCYN-AQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 124
Query: 118 LSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQV 170
LSI ELQQLEK LE L + K Q MEQ+ +L+RK QL E N QL+N++
Sbjct: 125 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 177
>Os08g0431900 Transcription factor MADS23
Length = 159
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 100/155 (64%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + EIKRI++A +RQVTFSKRR GLFKKA ELS+LCDA+V L+VFSST +L FASS
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
Query: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI 120
SM II++YN + + S + L + A L +QL RQ+ G++L GL +
Sbjct: 61 SMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDV 120
Query: 121 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRK 155
++LQ LE LE L + L KD M+QI EL RK
Sbjct: 121 EDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
>Os02g0682200 Similar to MADS box protein
Length = 250
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 109/173 (63%), Gaps = 6/173 (3%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R R E+KRIE+ RQVTFSKRR GL KKA ELSVLCDA+VALI+FSS GKL F S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLA--EASLRL-RQMRGEELEG 117
+ + +++Y N A+ + L+ S Y +++ A EA R R + GE+L
Sbjct: 61 GITKTLERYQHCCYN---AQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGP 117
Query: 118 LSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQV 170
LS+ ELQQLEK LE L + K Q MEQ+ EL+RK QL E N QL++++
Sbjct: 118 LSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170
>Os06g0162800 MADS box protein
Length = 225
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 124/204 (60%), Gaps = 3/204 (1%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + E+KRIE+ +RQVTF+KRR GL KKA ELSVLCDA+VALI+FS+ G+L F++S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 S-MNEIIDKYNTHSNNLGKAE-QPSLDLNL-EHSKYAHLNEQLAEASLRLRQMRGEELEG 117
S M + +++Y + + NL E +L+ L + +Y L ++ R + GE+L
Sbjct: 61 SCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVP 120
Query: 118 LSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAE 177
LS+ EL+QLE +E L + +K+QQ ++Q+ EL+RK QL + N L+ ++ + S
Sbjct: 121 LSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGEN 180
Query: 178 KQVVDTENFVTEGQSSESVMTALH 201
+ ++ G +SE+ LH
Sbjct: 181 MLHISCQDVGPSGHASEANQEFLH 204
>Os02g0731200 Transcription factor MADS57
Length = 241
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + I+RI+++ +RQVTFSKRR GL KKA+ELS+LCDA+V L+VFSSTG+L F+S+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI 120
+M +ID+Y L S ++ + + A L +QL +Q+ GEEL GL +
Sbjct: 61 NMKTVIDRYTNAKEELLGGNATS-EIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGV 119
Query: 121 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQIS 174
+LQ LE LE L + + KD +I EL K S + +EN++L ++ +S
Sbjct: 120 RDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMS 173
>Os07g0605200 MADS box transcription factor 18 (OsMADS18) (MADS box protein 2)
(MADS box protein 28) (FDRMADS7)
Length = 249
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
M R +++RIE+ RQVTFSKRR GL KKA E+SVLCDADVALIVFS+ GKL F+S
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 60 SSMNEIIDKYNTHSNNLGKAEQPSLDLNLEH-----SKYAHLNEQLAEASLRLRQMRGEE 114
SSM I+++Y +S + E+ L+ N E +Y L +L RQ+ GE+
Sbjct: 61 SSMEGILERYQRYSFD----ERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQ 116
Query: 115 LEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQIS 174
L+ L+I ELQQLE LE L + K+Q E ISELQ+K L +N L+ +
Sbjct: 117 LDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEK 176
Query: 175 PAEKQVVDT----ENFVTEGQSSESVMTA 199
+++T +N T SS + +TA
Sbjct: 177 EKNNAIINTNREEQNGATPSTSSPTPVTA 205
>Os10g0536100 Transcription factor MADS56
Length = 230
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 105/170 (61%), Gaps = 1/170 (0%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R R E+KRIE+ +RQVTFSKRR GL KKA ELSVLCDA+VALIVFS G+L FAS+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 -SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLS 119
S+ + ID+Y ++ + + D+ L ++L R++ GE LEG S
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
Query: 120 IDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQ 169
I+EL+ LE LE LH++ L K + +QI++L+ K L ++N LR +
Sbjct: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
>AF141965
Length = 233
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R R E+KRIE+ +RQVTFSKRR GL KKA ELSVLCDA+VALIVFS G+L FAS+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 -SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLS 119
S+ + ID+Y ++ + + D+ L ++L R++ GE LEG S
Sbjct: 61 PSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCS 120
Query: 120 IDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQ 169
I+EL+ LE LE LH + L K + QI++L+ K L ++N LR +
Sbjct: 121 IEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGK 170
>Os04g0304400 Similar to MADS-box protein AGL16-II
Length = 227
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 3/195 (1%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + IKRI++ RQVTFSKRR GL KKA EL++LCDADV LIVFS TG+L F+SS
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
Query: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI 120
SM II++Y + P + + L +Q+ RQ+ GEE+ ++
Sbjct: 61 SMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTV 120
Query: 121 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQV 180
+LQ L+ +E LH + KDQ E+I +L K S + +EN +LR + + A ++
Sbjct: 121 RDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELR---KKFNIAHQRN 177
Query: 181 VDTENFVTEGQSSES 195
++ + G+S+ S
Sbjct: 178 IELHKKLNSGESTSS 192
>Os03g0215400 Box protein (MADS box protein MADS1)
Length = 257
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 110/175 (62%), Gaps = 3/175 (1%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + E+KRIE+ +RQVTF+KRR GL KKA ELS+LCDA+VALI+FS G+L F+SS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 S-MNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLS 119
S M + +++Y + + N A P ++N + +Y L ++ R + GE+L LS
Sbjct: 61 SCMYKTLERYRSCNYNSQDAAAPENEIN--YQEYLKLKTRVEFLQTTQRNILGEDLGPLS 118
Query: 120 IDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQIS 174
+ EL+QLE +E L ++ K+Q ++Q+ +L+ K QL + N LR ++ + S
Sbjct: 119 MKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETS 173
>Os09g0507200 MADS box protein
Length = 248
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R R E+KRIE+ RQVTF+KRR GL KKA ELSVLCDA+VALI+FS+ GKL F S
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
Query: 61 -SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHS---KYAHLNEQLAEASLRLRQMRGEELE 116
SM +++Y S + + L S +Y L ++ R + GE+L
Sbjct: 61 QSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLG 120
Query: 117 GLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPA 176
L I EL+QLEK L++ L + T+ Q ++Q+++LQR+ L E N LR ++ + +
Sbjct: 121 TLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQL 180
Query: 177 EKQV 180
QV
Sbjct: 181 HGQV 184
>Os05g0203800 Similar to MADS box protein
Length = 233
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 2 ARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS 61
+R + EIKRIE+ RQVTF KRR GL KKA ELSVLCDA+VAL+VFSS G+L ++++S
Sbjct: 44 SRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 103
Query: 62 MNEIIDKYNTHSNNLGKAEQPSLDLNLEHSK--YAHLNEQLAEASLRLRQMRGEELEGLS 119
+ E I++Y +++ A + ++N +H + A L +Q+ R + G+ + ++
Sbjct: 104 VKETIERYKKANSDTSNASTVA-EINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMN 162
Query: 120 IDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQ 172
EL+QLE L+ GL ++ K++ +I +QR+ ++L +NM L+++V++
Sbjct: 163 HRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAE 215
>Os03g0122600 Transcription factor, MADS-box domain containing protein
Length = 230
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 109/178 (61%), Gaps = 6/178 (3%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + ++KRIE+ +RQVTFSKRR GL KKA ELSVLCDA+VALIVFS GKL FAS+
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 SMNEIIDKYNTHSN-NLGKAEQPSLDLNLEHSK--YAHLNEQLAEASLRLRQMRGEELEG 117
S + I++Y T++ N+G ++ ++E K L ++L R++ GE+L+
Sbjct: 61 STQKTIERYRTYTKENIGNK---TVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDE 117
Query: 118 LSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISP 175
SI+EL LE LE L + K + EQ+++L+ K +L ++N +LR + P
Sbjct: 118 CSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKNQPP 175
>Os01g0886200 Similar to AGAMOUS homolog
Length = 265
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
M R + EIKRIE+ +RQVTF KRR GL KKA EL++LCDA++ALIVFSS G+L F++
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 60
Query: 60 SSMNEIIDKYNTHSNNLGKAEQPSLDLNL------EHSKYAHLNEQLAEASLRLRQMRGE 113
+S I++Y S + P +D+N E +K H + L A+ R + GE
Sbjct: 61 NSTRSTIERYKKASAST-SGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNAN---RHLIGE 116
Query: 114 ELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQI 173
+ ++ EL+ LE LE G+ R+ K + +I +Q++ + L ENM LR +V++
Sbjct: 117 SIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEA 176
Query: 174 SPAE 177
AE
Sbjct: 177 ERAE 180
>Os12g0207000 Transcription factor
Length = 270
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 106/176 (60%), Gaps = 4/176 (2%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFA-S 59
M R R EIKRIE+ +RQVTF KRR GL KKA ELSVLCDA+VALIVFSS G+L ++ +
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
Query: 60 SSMNEIIDKYNTHSNNLGKAEQPSLDLNLE---HSKYAHLNEQLAEASLRLRQMRGEELE 116
+++ ID+Y + P +++N + + A L Q+ + + G+ +
Sbjct: 61 NNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVS 120
Query: 117 GLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQ 172
LS+ EL+QLE LE G+ ++ K++ +I+ + ++ +L +NM LR ++++
Sbjct: 121 NLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAE 176
>Os08g0531700 Similar to Developmental protein SEPALLATA2 (Agamous-like MADS box
protein AGL4)
Length = 310
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 106/209 (50%), Gaps = 39/209 (18%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R R E+KRIE+ RQVTF+KRR GL KKA ELSVLCDA+VALI+FS+ GKL F S+
Sbjct: 27 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 86
Query: 61 -SMNEIIDKY-------------NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLR 106
SM + ++KY N S L + L L Q ++ R
Sbjct: 87 QSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRQYYKSKHR 146
Query: 107 L-------------------------RQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTK 141
L R + GE+L+ L I EL+ LEK L++ L V T+
Sbjct: 147 LCLVRSKVWNLVKIRDDVTEKLCMYERNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTR 206
Query: 142 DQQFMEQISELQRKSSQLAEENMQLRNQV 170
+ ++Q++ELQRK ++E N LR ++
Sbjct: 207 TKHLVDQLTELQRKEQMVSEANRCLRRKL 235
>Os12g0501700 Transcription factor, MADS-box domain containing protein
Length = 233
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 108/168 (64%), Gaps = 13/168 (7%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + +++RIE+ +RQVTFSKRR GL KKA E++VLCD DVA IVFS+ G L H+ASS
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 61 --SMNEIIDKYNTH-----SNNLGKAEQPSLD--LNLEHSKYAHLNEQLAEASLRLRQMR 111
+M I++KY+ H NN+ + E P L+ ++ +H K E L ++ R +
Sbjct: 61 HTTMERILEKYDRHELLSEGNNVIE-EFPELEGSMSYDHIKLRGRIEALKKSQ---RNLM 116
Query: 112 GEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQL 159
G+EL+ L++ ++QQLE ++ L+ + K++ ME+ + L++K ++L
Sbjct: 117 GQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITEL 164
>Os06g0712700 MADS-box protein SPW1
Length = 224
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + EIKRIE+A RQVT+SKRR G+ KKA EL+VLCDA VA+I+FSSTGK F S
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 61 S--MNEIIDKY-NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEG 117
S + I D+Y +L + ++ L H K +N L +RQ GE+L+G
Sbjct: 61 STDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLK--DINRNL---RTEIRQRMGEDLDG 115
Query: 118 LSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRK 155
L DEL+ LE+N++A L V K Q ++K
Sbjct: 116 LEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKK 153
>Os02g0170300 Similar to MADS box protein ZMM17
Length = 260
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 99/169 (58%), Gaps = 13/169 (7%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
M R + EIKRIE+A RQVTFSKRR GL KKA EL+VLCDA V +++FSSTGK+ + S
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 60 -SSMNEIIDKY----NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEE 114
S+ E+I+ Y NTH + +Q +++ + ++ + +R+ G++
Sbjct: 61 TCSLRELIEHYQTVTNTHFEEINHDQQIFVEM-------TRMRNEMEKLDGGIRRFTGDD 113
Query: 115 LEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEEN 163
L L++ ++ LE+ LE + +V K Q +Q+ L+RK L ++N
Sbjct: 114 LSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQN 162
>Os03g0753100 Transcription factor, MADS-box domain containing protein
Length = 239
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + ++RIE+ +RQVTF+KRR GL KKA ELS+LCDA+VAL++FS G+L F+SS
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
Query: 61 S-MNEIIDKYNTHSNNLGKAEQPSLD-LNLEHSKYAHLNEQLAEASLRLRQMRGEELEGL 118
S M + +++Y + A P+ D + + +Y +L + R + GE+L L
Sbjct: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120
Query: 119 SIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQI 173
+ +EL+QLE + L ++ K Q ++++ +L+RK L + N L+ ++ +I
Sbjct: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEI 175
>Os03g0752800 MADS14 protein
Length = 246
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 109/174 (62%), Gaps = 6/174 (3%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
M R + ++KRIE+ RQVTFSKRR GL KKA E+SVLCDA+VALI+FS+ GKL +A+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 60 SSMNEIIDKYNTHS---NNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELE 116
S M++I+++Y +S L AE + N H +Y L ++ + + GE+LE
Sbjct: 61 SCMDKILERYERYSYAEKVLISAESDTQG-NWCH-EYRKLKAKVETIQKCQKHLMGEDLE 118
Query: 117 GLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQV 170
L++ ELQQLE+ LE L + K Q +E I+ELQRK L EEN L+ ++
Sbjct: 119 SLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKEL 172
>Os01g0883100 Similar to PISTILLATA-like MADS box protein
Length = 209
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 12/166 (7%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
M R + EIKRIE++ RQVTFSKRR G+ KKA E+SVLCDA+V +++FSS GKL + S
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 60 -SSMNEIIDKYNTHSNN-LGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEG 117
+S++ I++KY T+S L + SL ++ K + N Q + LR ++GE+L
Sbjct: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQ-----IELRHLKGEDLNS 115
Query: 118 LSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEEN 163
L EL +E+ L+ G+ V + + M+ R L +EN
Sbjct: 116 LQPKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDEN 157
>Os06g0667200 MADS30
Length = 221
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 106/178 (59%), Gaps = 8/178 (4%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M + + E+KRIE A RQVTFSKRR G KKA EL+VLCDA V ++VFS GKL F S
Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSP 60
Query: 61 S--MNEIIDKY--NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELE 116
+ E+ +Y T + L + + + +E ++ + +QL EASLR RQ GE+L
Sbjct: 61 PVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQL-EASLR-RQT-GEDLS 117
Query: 117 GLS-IDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQI 173
+S +DEL QL+ LE+ L +V KD+ +Q+ +++R + E+N L V++I
Sbjct: 118 SVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLCRMVTKI 175
>AK069331
Length = 284
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 6/167 (3%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
M R + ++KRIE+ RQVTFSKRR GL KKA E+SVLCDA+VALI+FS+ GKL +A+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 60 SSMNEIIDKYNTHS---NNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELE 116
S M++I+++Y +S L AE + N H +Y L ++ + + GE+LE
Sbjct: 61 SCMDKILERYERYSYAEKVLISAESDTQG-NWCH-EYRKLKAKVETIQKCQKHLMGEDLE 118
Query: 117 GLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEEN 163
L++ ELQQLE+ LE L + K Q +E I+ELQRK L EEN
Sbjct: 119 SLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEEN 165
>Os12g0206800 Transcription factor, MADS-box domain containing protein
Length = 202
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 100/178 (56%), Gaps = 11/178 (6%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
M R + +++RIE+ RQVTF KRR GL KKA ELSVLCDADV +I+FSS GKL A+
Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60
Query: 60 SSMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAH-----LNEQLAEASLRLRQMRGEE 114
+M+ ++++Y SN G +P L+ + A L E++ LR G
Sbjct: 61 GNMHNLVERY--QSNVAGGQMEPG---ALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGG 115
Query: 115 LEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQ 172
+++D+L LEK LE ++++ TK Q ++I L+ K L E N L+ +V +
Sbjct: 116 AGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKE 173
>Os07g0108900 MADS15 protein
Length = 267
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 109/174 (62%), Gaps = 6/174 (3%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + ++KRIE+ RQVTFSKRR GL KKA E+SVLCDA+VA IVFS GKL +A+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 61 S-MNEIIDKYNTHS---NNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELE 116
S M++I+++Y +S L AE S + N H +Y L ++ + + GE+LE
Sbjct: 61 SRMDKILERYERYSYAEKALISAESES-EGNWCH-EYRKLKAKIETIQKCHKHLMGEDLE 118
Query: 117 GLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQV 170
L++ ELQQLE+ LE+ L ++ K +E ISELQ+K L EEN L+ ++
Sbjct: 119 SLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 172
>Os01g0726400 Transcription factor, MADS-box domain containing protein
Length = 196
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 11/177 (6%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
M R R EIKRIE+ RQ TF KRR GLFKKA EL+VLCDAD+ L++FS++GKL HF S
Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSP 60
Query: 60 --SSMNEIIDKY--NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEEL 115
S+ E +++Y TH+ Q + E K + + L + +LR M ++
Sbjct: 61 TVPSVREFVERYEATTHTKVWADIRQ---ERRAELEKVGSMCDLLEK---QLRFMTVDDG 114
Query: 116 EGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQ 172
E ++ L+ LE NLEA + +V KD++ +I LQ EE L ++++
Sbjct: 115 EEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQNIIRGRQEERYGLCDKIAH 171
>Os05g0423400 Similar to PISTILLATA-like MADS box protein
Length = 215
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 83/141 (58%), Gaps = 13/141 (9%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
M R + EIKRIE++ RQVTFSKRR G+ KKA E+ VLCDA+V +++FSS GKLS + +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTP 60
Query: 60 ------SSMNEIIDKYNTHSNN-LGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRG 112
++ I++KY T+S L + SL ++ K + N Q + LR M+G
Sbjct: 61 KTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQ-----IELRHMKG 115
Query: 113 EELEGLSIDELQQLEKNLEAG 133
E+L L EL +E+ L G
Sbjct: 116 EDLNSLQPKELIAIEEALNNG 136
>Os04g0461300 Transcription factor, MADS-box domain containing protein
Length = 94
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 58/69 (84%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + I+RI+++ +RQVTFSKRR G+FKKA+EL++LCDA+V L++FSSTG+L +AS+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAST 60
Query: 61 SMNEIIDKY 69
SM +ID+Y
Sbjct: 61 SMKSVIDRY 69
>Os08g0112700 Similar to TAGL12 transcription factor
Length = 222
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 6/173 (3%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
MAR + +++RIE+ RQVTF KRR GL KKA ELS+LC+AD+ +I+FS+ GKL A++
Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
Query: 61 -SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAH-LNEQLAEASLRLRQMRGEEL-EG 117
+M E+I++Y + S G+ D ++ + A L +++ LR + G E
Sbjct: 61 GTMEELIERYKSAS---GEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEH 117
Query: 118 LSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQV 170
++++EL LE+ LE ++ + K Q +++I L+ K L N L+ ++
Sbjct: 118 MTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKI 170
>Os01g0201700 Similar to MADS box protein
Length = 154
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + EIKRIE+ RQVTF KRR GL KKA ELSVLCDA+VALIVFSS G+L +A++
Sbjct: 41 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 100
Query: 61 SMNEIIDKY---NTHSNNLG 77
S+ +++Y N+ ++N G
Sbjct: 101 SVKSTVERYKKANSDTSNSG 120
>Os04g0614100 Transcription factor, MADS-box domain containing protein
Length = 178
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 5/143 (3%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R R E+K+IE+ RQVTFSKRR GL KKA EL++LCDA + +IVFS TGK+ ++S
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 61 S--MNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGL 118
+ I D+Y + + + E ++ N +L + +RQ G++L L
Sbjct: 61 PWRIANIFDRYLKAPSTRFEEMDVQQRIIQEMTRMKDENNRL---RIIMRQYMGDDLASL 117
Query: 119 SIDELQQLEKNLEAGLHRVMLTK 141
++ ++ LE+ +E L++V L K
Sbjct: 118 TLQDVSNLEQQIEFSLYKVRLRK 140
>Os08g0494100
Length = 337
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS- 59
M R + IKRIE+ RQVTFSKRR GL KKA ELSVLCD DVAL++FS +G+LSHF+
Sbjct: 1 MGRVKLPIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDVALLMFSPSGRLSHFSGR 60
Query: 60 SSMNEIIDKY-NTHSNNLGKAEQ 81
+ ++I +Y N ++ G+A Q
Sbjct: 61 RGVEDVILRYMNLSEHDRGEAIQ 83
>Os09g0116800
Length = 208
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
+ R++ EI+RIES ARQV FSKRR G FKKA ELS+LC ADVA +VFS GK F
Sbjct: 13 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHP 72
Query: 61 SMNEIIDKYNTHS--NNLGKAEQPSLDLNLEHSKYAHLNEQLAE 102
S+ ++D++ + S GK E S+ S A LN Q E
Sbjct: 73 SVEFLLDRFLSSSLPATAGKEEGSSV------SVVAELNRQYGE 110
>Os06g0223300 Similar to TDR8 protein
Length = 360
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFA 58
M R + +IKRIE+ RQVTFSKRR GL KKA ELSVLCD D+AL++FS +G+LSHF+
Sbjct: 1 MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSGRLSHFS 58
>Os01g0922800 Similar to MADS-box protein PTM5
Length = 164
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 1 MARERR-EIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFAS 59
MAR R +++RIE A+RQV FSKRR GLFKKA EL++LCD +VAL+VFS GKL ++S
Sbjct: 1 MARRGRVQLRRIEDKASRQVRFSKRRAGLFKKAFELALLCDVEVALLVFSPVGKLYEYSS 60
Query: 60 SSMNEIIDKY 69
SS+ D+Y
Sbjct: 61 SSIEGTYDRY 70
>Os06g0108100
Length = 767
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 8 IKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS 61
++RIE RQVTFSKRR+GL KKA ELSVLCDA+VAL+VFS G+ HFAS+
Sbjct: 1 MRRIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPRGRFFHFASAP 54
>Os01g0975800
Length = 208
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
+ R++ EI+RIES ARQV FSKRR G FKKA ELS+LC ADVA +VFS GK F
Sbjct: 15 LGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHP 74
Query: 61 SMNEIIDKYNTHSNN 75
S+ +++++ S++
Sbjct: 75 SVECLLERFLPDSSS 89
>Os06g0503500
Length = 210
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
+ R+R EI+RI+++ RQVTFSKRR GLFKKA ELS LC A VA++ FSS G + F
Sbjct: 10 LGRQRIEIRRIDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFAFGQP 69
Query: 61 SMNEIIDKYN 70
+++ ++ +++
Sbjct: 70 TVDAVVRRFD 79
>Os08g0531900 Similar to MADS box transcription factor-like protein (MADS-box
protein AGL72)
Length = 69
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 44/55 (80%)
Query: 7 EIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS 61
E++RIE +RQV FSKRR GLFKKA ELSVLCDA VAL+VFS G+L FASS+
Sbjct: 14 ELRRIEDRTSRQVRFSKRRSGLFKKAYELSVLCDAQVALLVFSPAGRLYEFASST 68
>Os06g0347700
Length = 74
Score = 77.0 bits (188), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R + I RIE+ +RQVTFSKRR GLFKKA+EL++LCDA V ++VFSSTG+L +++S
Sbjct: 1 MVRGKTVISRIENTTSRQVTFSKRRSGLFKKAKELAILCDAQVGVLVFSSTGRLYDYSNS 60
Query: 61 SM 62
S+
Sbjct: 61 SV 62
>Os02g0104100
Length = 103
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 42/51 (82%)
Query: 11 IESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS 61
IE A +RQVTFSKRR GL KKA ELSVLCDA+VALIVFS G+L FAS+S
Sbjct: 51 IEDATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPRGRLYQFASAS 101
>Os02g0164450
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 2 ARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS 61
R+R E+K IE+ ARQV FSKRR G+FKKA ELSVLC A VA++ FS G+ F S
Sbjct: 23 GRQRIEMKLIENKEARQVCFSKRREGVFKKASELSVLCGARVAVVFFSPAGRPHCFGHPS 82
Query: 62 MNEIIDKY 69
++ + D++
Sbjct: 83 VSAVADRF 90
>Os05g0303400
Length = 218
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 2 ARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS 61
R++ EIKRIE AR V FSKRR+ LF KA ELS+LC+A++A +V S G+ FA S
Sbjct: 9 GRKKVEIKRIEKKDARDVCFSKRRQTLFNKAGELSLLCNANIAAVVISPAGRGFSFAHPS 68
Query: 62 MNEIIDK 68
++++ D+
Sbjct: 69 VDDVADR 75
>Os12g0407000
Length = 194
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M R+R EI+RI++ RQVTF+KRR GLFKKA EL++L A VA++VFS + F
Sbjct: 10 MGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHVYAFGHP 69
Query: 61 SMNEIIDKYNT 71
S++ ++ Y +
Sbjct: 70 SVDAVLRSYAS 80
>Os06g0333700
Length = 238
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Query: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
M + + EIKRI++ ARQV FSKRR +FKKA EL +C A+VA++V S GK F +
Sbjct: 1 MTKRKIEIKRIKNEEARQVCFSKRRPSVFKKASELYTVCGAEVAMLVKSPAGKFFSFGAP 60
Query: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYA-----HLNEQLAEASLRLRQMRGEEL 115
S+ ++ ++ H+ + + S+ + ++H A LN+Q E +L Q + E++
Sbjct: 61 SVGFVLSRF--HATTTSR-KHSSMGVTIQHDNSATIKLHELNQQHIELQNQL-QAQNEKM 116
Query: 116 EGL 118
+ L
Sbjct: 117 KAL 119
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.126 0.333
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,512,267
Number of extensions: 181929
Number of successful extensions: 852
Number of sequences better than 1.0e-10: 51
Number of HSP's gapped: 820
Number of HSP's successfully gapped: 51
Length of query: 228
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 131
Effective length of database: 11,971,043
Effective search space: 1568206633
Effective search space used: 1568206633
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 154 (63.9 bits)