BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0717600 Os06g0717600|AK067113
(232 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0717600 Zinc finger, RING-type domain containing protein 470 e-133
Os08g0550400 Similar to RING-H2 finger protein ATL5P 229 1e-60
Os10g0544600 Fibrillarin family protein 225 2e-59
Os07g0479100 Zinc finger, RING-type domain containing protein 187 4e-48
Os02g0743700 Similar to RING-H2 finger protein ATL1Q 149 2e-36
Os09g0542600 Similar to RING-H2 finger protein ATL1I 143 1e-34
Os06g0231600 Zinc finger, RING-type domain containing protein 137 9e-33
Os02g0820200 Zinc finger, RING-type domain containing protein 78 5e-15
Os04g0450400 Zinc finger, RING-type domain containing protein 76 2e-14
Os02g0692000 Similar to RING finger family protein 76 2e-14
Os06g0666500 Zinc finger, RING-type domain containing protein 73 1e-13
Os05g0478000 Zinc finger, RING-type domain containing protein 73 2e-13
Os02g0248900 71 6e-13
Os12g0432600 Zinc finger, RING-type domain containing protein 71 7e-13
Os02g0790600 Similar to RING-H2 finger protein ATL1R (RING-... 70 9e-13
Os02g0248280 70 1e-12
Os01g0212700 Zinc finger, RING-type domain containing protein 70 2e-12
Os02g0767600 70 2e-12
Os04g0419500 Zinc finger, RING-type domain containing protein 70 2e-12
Os06g0187300 69 2e-12
Os01g0213400 Zinc finger, RING-type domain containing protein 69 2e-12
Os02g0832150 Zinc finger, RING-type domain containing protein 69 3e-12
Os08g0445000 Similar to RING-H2 finger protein ATL5A 69 3e-12
AK064102 69 3e-12
Os06g0537300 69 3e-12
Os06g0539800 69 4e-12
Os06g0534900 Zinc finger, RING-type domain containing protein 69 4e-12
Os04g0590900 Similar to RING-H2 finger protein ATL1B 67 8e-12
Os11g0703300 67 9e-12
Os02g0572350 Zinc finger, RING-type domain containing protein 67 9e-12
AK109940 67 9e-12
Os01g0802000 Zinc finger, RING-type domain containing protein 67 1e-11
Os01g0755700 Zinc finger, RING-type domain containing protein 67 1e-11
Os03g0149800 Similar to RING-H2 finger protein ATL1D 67 1e-11
Os01g0736600 Zinc finger, RING-type domain containing protein 67 2e-11
Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-... 66 2e-11
Os02g0743100 Zinc finger, RING-type domain containing protein 66 2e-11
Os01g0822800 Similar to RING-H2 finger protein ATL3C 66 2e-11
Os12g0115600 66 3e-11
Os02g0249200 65 3e-11
Os06g0537500 65 3e-11
Os01g0311100 65 3e-11
Os09g0554200 Zinc finger, RING-type domain containing protein 65 4e-11
Os03g0391100 65 4e-11
Os12g0596200 Similar to RING-H2 protein 65 4e-11
Os02g0686100 Similar to RING-H2 finger protein ATL1B 65 4e-11
Os09g0468300 Zinc finger, RING-type domain containing protein 65 4e-11
Os03g0812200 Zinc finger, RING-type domain containing protein 65 4e-11
Os02g0572300 65 4e-11
Os02g0541500 65 5e-11
Os06g0536600 65 6e-11
Os06g0536100 64 7e-11
Os03g0351800 Zinc finger, RING-type domain containing protein 64 8e-11
Os06g0540400 Zinc finger, RING-type domain containing protein 64 9e-11
Os06g0155200 64 9e-11
Os01g0830900 64 9e-11
>Os06g0717600 Zinc finger, RING-type domain containing protein
Length = 232
Score = 470 bits (1210), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MDPSGAFFHAAPRSGSNVSLASLARTAGGRRMMHRVFRGVITFIFAIAGLFLGAVTGGLI 60
MDPSGAFFHAAPRSGSNVSLASLARTAGGRRMMHRVFRGVITFIFAIAGLFLGAVTGGLI
Sbjct: 1 MDPSGAFFHAAPRSGSNVSLASLARTAGGRRMMHRVFRGVITFIFAIAGLFLGAVTGGLI 60
Query: 61 GLATESGLFRGTGIGAITGALVSIEVVDSSIRVWRSRRSGISSICYVLNVIYSLLTGRLV 120
GLATESGLFRGTGIGAITGALVSIEVVDSSIRVWRSRRSGISSICYVLNVIYSLLTGRLV
Sbjct: 61 GLATESGLFRGTGIGAITGALVSIEVVDSSIRVWRSRRSGISSICYVLNVIYSLLTGRLV 120
Query: 121 REKVDPAVQRVVRSQMNAVDSSPFRESPDLFEIEGTNGMPRASIDKLPEVRITEEYRRNA 180
REKVDPAVQRVVRSQMNAVDSSPFRESPDLFEIEGTNGMPRASIDKLPEVRITEEYRRNA
Sbjct: 121 REKVDPAVQRVVRSQMNAVDSSPFRESPDLFEIEGTNGMPRASIDKLPEVRITEEYRRNA 180
Query: 181 IGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
IGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL
Sbjct: 181 IGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
>Os08g0550400 Similar to RING-H2 finger protein ATL5P
Length = 260
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 149/211 (70%), Gaps = 14/211 (6%)
Query: 31 RMMHRVFRGVITFIFAIAGLFLGAVTGGLIGLATESGLFRGTGIGAITGALVSIEVVDSS 90
R+ V RG++TF+FA G LGA+TGGLIGLATESG+ RGTGIGAI+GA+V++EVVDSS
Sbjct: 40 RVAGAVARGIVTFVFATVGTILGAITGGLIGLATESGMVRGTGIGAISGAVVAMEVVDSS 99
Query: 91 IRVWRSRRSGISSICYVLNVIYSLLTGRLVREKVDPAVQRVVRSQMNAVDSSPFRES-PD 149
+ +W S SGI S+ YVL+VI+SLLTGRLVREKVDPAVQ V SQMNA D +PFRES P
Sbjct: 100 VAMWCSHDSGIWSVLYVLDVIWSLLTGRLVREKVDPAVQNAVDSQMNAAD-APFRESAPT 158
Query: 150 LFEIEGT---------NGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKV 200
L E+ T GMP +I LP +T D +GCSVCLQD + GE+
Sbjct: 159 LAEMFDTGIPGVAAAATGMPADAIAALP---VTTFAAAAGGDDRAGCSVCLQDLEDGERA 215
Query: 201 RSLPDCWHVFHVPCIDGWLIKHGSCPLCRRK 231
R LP+C H FH+ CID WL++H SCPLCRR
Sbjct: 216 RRLPECGHTFHLRCIDSWLLRHASCPLCRRT 246
>Os10g0544600 Fibrillarin family protein
Length = 233
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 144/198 (72%), Gaps = 1/198 (0%)
Query: 35 RVFRGVITFIFAIAGLFLGAVTGGLIGLATESGLFRGTGIGAITGALVSIEVVDSSIRVW 94
RV V T +FA G +GAVTG IGLATESG+ RG GIGAI+GA+ SIEV +SS +W
Sbjct: 37 RVLCAVATCVFAAVGSVVGAVTGSAIGLATESGMLRGAGIGAISGAVFSIEVAESSRDLW 96
Query: 95 RSRRSGISSICYVLNVIYSLLTGRLVREKVDPAVQRVVRSQMNAVDSSPFRESPDLFEIE 154
S S + + Y++++I SLL+GRLVREKV PAVQ V+SQ++A+ SSPF E+ DLFE
Sbjct: 97 HSSDSAVWCLVYMVDIISSLLSGRLVREKVGPAVQSAVQSQISAI-SSPFAETSDLFETG 155
Query: 155 GTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPC 214
GT G+P ++ +LP ++IT + ++ G+ CSVCLQDF+ GE R LP C HVFHVPC
Sbjct: 156 GTKGLPADTLRRLPAIKITGDNAVDSAGEPICCSVCLQDFRVGEMARRLPSCRHVFHVPC 215
Query: 215 IDGWLIKHGSCPLCRRKL 232
ID WL++HGSCPLCRR +
Sbjct: 216 IDCWLVRHGSCPLCRRDI 233
>Os07g0479100 Zinc finger, RING-type domain containing protein
Length = 249
Score = 187 bits (476), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 39 GVITFIFAIAGLFLGAVTGGLIGLATESGLFRGTGIGAITGALVSIEVVDSSIRVWRSRR 98
++T +FA+ G +G G +G++TESG+ RG G+G ++GA+ SIE V+S I +WRS
Sbjct: 51 ALLTCVFAVVGSLVGVFIGAFMGMSTESGMLRGAGVGVVSGAVFSIEAVESCIEIWRSSE 110
Query: 99 SGISSICYVLNVIYSLLTGRLVREKVDPAVQRVVRSQMNAVDSSPFRESPDLFEIEGTNG 158
SG SI +VL++I SL +GR+V EKV PA+QR V+SQM+ + S+PF ++ DLFE T G
Sbjct: 111 SGKYSIIFVLDIISSLFSGRIVWEKVSPALQRAVQSQMSLL-STPFIDNNDLFETGNTGG 169
Query: 159 MPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGW 218
M R I+++P+ + + D + C+VCLQDF + VR LP C H FH CID W
Sbjct: 170 MSRDLINRIPKTTFSAATNPDQETD-NCCAVCLQDFGASQFVRVLPHCQHTFHARCIDNW 228
Query: 219 LIKHGSCPLCR 229
L +H SCPLCR
Sbjct: 229 LFRHASCPLCR 239
>Os02g0743700 Similar to RING-H2 finger protein ATL1Q
Length = 220
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 125/203 (61%), Gaps = 8/203 (3%)
Query: 31 RMMHRVFRGVITFIFAIAGLFLGAVTGGLIGLATESGLFRGTGIGAITGALVSIEVVDSS 90
R++ V G +T +FA+AG GAVTG L G A++SG+ RG G+GA GA++SIEV+++S
Sbjct: 21 RLLAGVISGALTGLFALAGALTGAVTGALAGRASDSGVLRGAGLGAFAGAVLSIEVLEAS 80
Query: 91 IRVWRSRRSGISSICYVLNVIYSLLTGRLVREKVDPAVQRVVRSQMNAVDSSPFRESPDL 150
W S R G + + I LL R V+E++ P+ R Q++ D DL
Sbjct: 81 RAYWCSDRLGSHGTSSMADFIEQLLQARFVQEQIVPSGYATHRWQVSISDFG----HDDL 136
Query: 151 FEIEG---TNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCW 207
++I G + G+ R S++KLP +T++ RN+ G+ C++CLQD TGE R LP+C
Sbjct: 137 YDIFGDCSSKGLSRESLNKLPHYVVTDQ-TRNSFGEDLSCTICLQDIVTGETARRLPNCS 195
Query: 208 HVFHVPCIDGWLIKHGSCPLCRR 230
H FH PC+D WL+ HGSCP+CR+
Sbjct: 196 HTFHQPCVDKWLVGHGSCPVCRQ 218
>Os09g0542600 Similar to RING-H2 finger protein ATL1I
Length = 217
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 125/210 (59%), Gaps = 13/210 (6%)
Query: 30 RRMMHRVFRGVITFIFAI---AGLFLGAVTGGLIGLATESGLFRGTGIGAITGALVSIEV 86
RR+ ++ R + T +FA AG+ LGA+ G + G +E GL +GT IGAI+GA +++EV
Sbjct: 9 RRVAGKLARCLATCVFATGVQAGMMLGAIAGVIAGFVSEDGLLQGTLIGAISGAFIAMEV 68
Query: 87 VDSSIRVWRSRRSGISSICYV-LNVIYSLLTGRL-VREKVDPAVQRVVRSQMNAVDSSPF 144
VDS ++W I++ ++ L V ++L+ RL VR V P + V+ SQ+NAV S
Sbjct: 69 VDSLAKIWCYEEYSIATRAHLMLLVFWNLVIDRLTVRTSVFPTLTTVLDSQLNAVPSRHR 128
Query: 145 RE--SPDLF--EIEGTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKV 200
R S DL GM A++D+LP +++T + +A G C +CL DF+ GE
Sbjct: 129 RAEVSGDLTGRSYPVVMGMRLAAVDQLPVIKLTAA-QTDATG---ACPICLHDFKAGEIA 184
Query: 201 RSLPDCWHVFHVPCIDGWLIKHGSCPLCRR 230
R LP C H+FH+ CID WL+ H CP+CRR
Sbjct: 185 RRLPACCHIFHLGCIDNWLLWHALCPMCRR 214
>Os06g0231600 Zinc finger, RING-type domain containing protein
Length = 222
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 1/197 (0%)
Query: 31 RMMHRVFRGVITFIFAIAGLFLGAVTGGLIGLATESGLFRGTGIGAITGALVSIEVVDSS 90
R++ V G++T IFA+AG GAVTG L G A++ G+ RG G+G GA++SIE++++S
Sbjct: 26 RLLRGVVSGMLTGIFAVAGGLTGAVTGALAGRASDGGVLRGAGLGTFAGAVLSIEILEAS 85
Query: 91 IRVWRSRRSGISSICYVLNVIYSLLTGRLVREKVDPAVQRVVRSQMNAVDSSPFRESPDL 150
W RS + + + L+ R V+E+ + + R Q+ D L
Sbjct: 86 RAYWCQDRSSSPGSLSMGDFVKQLIHARFVQEQNEASGHITYRWQVGIADVVNGAVHEIL 145
Query: 151 FEIEGTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVF 210
++ G+ + S+ KLP + ++ +IG+ C VCLQD G+ VR LP C H F
Sbjct: 146 GDVPSGEGLSKYSLMKLP-YHVVIDHNNGSIGESLSCPVCLQDVVAGQTVRRLPKCSHTF 204
Query: 211 HVPCIDGWLIKHGSCPL 227
H PC+D WL+ HGSCP+
Sbjct: 205 HQPCVDKWLVGHGSCPM 221
>Os02g0820200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Query: 158 GMPRASIDKLPEVRITEEYRR---NAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPC 214
G+ A+I LP R YR+ + D S C+VC+ +FQ E+VR LP C HVFHV C
Sbjct: 114 GLEEAAIQSLPAFR----YRKAIKDTTADSSECAVCISEFQEEERVRLLPSCLHVFHVDC 169
Query: 215 IDGWLIKHGSCPLCR 229
ID WL + +CPLCR
Sbjct: 170 IDTWLQGNANCPLCR 184
>Os04g0450400 Zinc finger, RING-type domain containing protein
Length = 415
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 156 TNGMPRASIDKLPEVRITEEYRRNA-IGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPC 214
T G+ A+ID + R YR A + + CSVCL +FQ GE VR LP C H FHVPC
Sbjct: 174 TVGLDEAAIDSIAATR----YRAGAGLLGAADCSVCLGEFQDGELVRLLPKCGHAFHVPC 229
Query: 215 IDGWLIKHGSCPLCRRKL 232
ID WL H +CPLCR +
Sbjct: 230 IDTWLRAHVNCPLCRSDV 247
>Os02g0692000 Similar to RING finger family protein
Length = 389
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 147 SPDLFEIEGTNGMPRASIDKLPEVRITEEYRR-NAIGDLSGCSVCLQDFQTGEKVRSLPD 205
S + + + ++GM I+K+ + YRR + D + CSVCL +F+ GE +R LP
Sbjct: 127 SQEPWSVALSDGMDETLINKITVCK----YRRGDGFVDSTDCSVCLGEFREGESLRLLPK 182
Query: 206 CWHVFHVPCIDGWLIKHGSCPLCR 229
C H FHVPCID WL H +CPLCR
Sbjct: 183 CSHAFHVPCIDTWLKSHSNCPLCR 206
>Os06g0666500 Zinc finger, RING-type domain containing protein
Length = 181
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 158 GMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDG 217
G+ R + LP Y + ++GC++CL DF GE+VR LP C H FHV CID
Sbjct: 86 GLKREDVVALP----VATYVASPAPSVAGCAICLSDFADGERVRLLPACGHRFHVVCIDR 141
Query: 218 WLIKHGSCPLCRRK 231
WL+ H SCP CRR+
Sbjct: 142 WLLAHCSCPTCRRR 155
>Os05g0478000 Zinc finger, RING-type domain containing protein
Length = 189
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
C++CL +F GEKVR LP C H FHV C+D WL+ HGSCP CRR++
Sbjct: 124 CAICLGEFADGEKVRVLPRCRHGFHVRCVDAWLVSHGSCPTCRRQV 169
>Os02g0248900
Length = 195
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 158 GMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDG 217
G+ A+ID LP +E R G CSVCL+D + GE VR LP C H++H CID
Sbjct: 95 GLTAAAIDALPA---SEYERPRGGGGDPACSVCLEDVRGGETVRWLPACGHLYHAACIDA 151
Query: 218 WLIKHGSCPLCRRKL 232
WL +CPLCR L
Sbjct: 152 WLRSRTTCPLCRSDL 166
>Os12g0432600 Zinc finger, RING-type domain containing protein
Length = 185
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 158 GMPRASIDKLPEVRITEEYRRNAIGD-LSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCID 216
G+ + I+ +P EYRR + G ++ C+VC+ + G+ VR LP C H FH PC+D
Sbjct: 97 GLSQEDIEAIPAF----EYRRGSSGSGVAQCAVCIAAVKDGDTVRRLPACGHAFHAPCVD 152
Query: 217 GWLIKHGSCPLCR 229
GWL H +CP+CR
Sbjct: 153 GWLRDHATCPMCR 165
>Os02g0790600 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 428
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 133 RSQMNAVDSSPFR-ESPDLFEIEGTNGMPRASIDKLPEVRITEEYRRNAIG-------DL 184
R++ +A ++ F + LF + G+ +A ID LP RN +G D
Sbjct: 67 RAREDAESATAFEGQLQQLFHLHDA-GVDQAFIDALPVF-----LYRNVVGVGGEDGKDP 120
Query: 185 SGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
C+VCL +F +++R LP C H FH+ CID WL+ H +CPLCRR L
Sbjct: 121 FDCAVCLCEFAADDQLRLLPKCSHAFHLECIDTWLLSHSTCPLCRRSL 168
>Os02g0248280
Length = 189
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 45/82 (54%), Gaps = 14/82 (17%)
Query: 158 GMPRASIDKLPEVRITEEYRRNAIGD----------LSGCSVCLQDFQTGEKVRSLPDCW 207
G+ A+ID LP Y R A D + CSVCL+D Q GE VR LP C
Sbjct: 76 GLVGAAIDALPAF----AYARPAADDGGGGGSKSGRCALCSVCLEDVQAGEMVRQLPACR 131
Query: 208 HVFHVPCIDGWLIKHGSCPLCR 229
H+FHV CID WL H +CPLCR
Sbjct: 132 HLFHVGCIDMWLHSHSTCPLCR 153
>Os01g0212700 Zinc finger, RING-type domain containing protein
Length = 185
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 141 SSPFRESPDLFEIEGTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKV 200
+S +E+P+ ++GM A+I LP A D C+VCL GEKV
Sbjct: 60 ASADQEAPE----ANSHGMSAAAIAALPTFGYEASAAAAAALD---CAVCLGQVDAGEKV 112
Query: 201 RSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
R LP C H+FH C+D WL H +CP+CR
Sbjct: 113 RQLPKCGHLFHAECVDAWLRAHSTCPMCR 141
>Os02g0767600
Length = 335
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 138 AVDSSPFRESPDLFEI---------EGTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCS 188
A+D + P+L + G P ++ID LP V+IT + + D S C
Sbjct: 145 AIDPGNYFNGPNLNNLIEELTQNDRPGPAPAPSSAIDSLPTVQITGAH----LSDGSQCP 200
Query: 189 VCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
VC +DF+ GE R +P C HV+H CI WL H SCP+CR +L
Sbjct: 201 VCKEDFELGEAARQMP-CKHVYHSDCIVPWLRLHNSCPVCRYQL 243
>Os04g0419500 Zinc finger, RING-type domain containing protein
Length = 202
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 155 GTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPC 214
+G+ R ++ +P + + + N + + C++CL DF+ GE VR LP C H FHV C
Sbjct: 86 AQSGLRRKALRSMPILLYSTGLKLNTVSPM--CAICLSDFEDGEHVRVLPKCNHGFHVRC 143
Query: 215 IDGWLIKHGSCPLCRRKL 232
ID WL+ +CP CR+ L
Sbjct: 144 IDRWLLARSTCPTCRQSL 161
>Os06g0187300
Length = 444
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
C+VCL +F +K+R LP C H FHVPCID WL+ H +CP+CR
Sbjct: 123 CAVCLCEFAGDDKLRLLPTCGHAFHVPCIDAWLLSHSTCPICR 165
>Os01g0213400 Zinc finger, RING-type domain containing protein
Length = 237
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 153 IEGTNGMPRASIDKLPEVRITEEYRRNAI--------------GDLSGCSVCLQDFQTGE 198
+ G G+ +++ LP YR+N + C+VCL + GE
Sbjct: 85 VSGRRGLDASALAALP----VTAYRKNGGGGGGGEGSNRGGPGATAADCAVCLSELADGE 140
Query: 199 KVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRK 231
KVR LP+C HVFHV C+D WL +CPLCR +
Sbjct: 141 KVRELPNCRHVFHVECVDAWLRSRTTCPLCRAE 173
>Os02g0832150 Zinc finger, RING-type domain containing protein
Length = 217
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 157 NGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCID 216
G+ + +ID LP V + ++ + C++CL +F GE++R LP C H FHV CID
Sbjct: 106 KGLKKKAIDALPTVSFALKQQQQQ----AECAICLAEFAGGEELRLLPHCGHAFHVSCID 161
Query: 217 GWLIKHGSCPLCR 229
WL H +CP CR
Sbjct: 162 TWLGTHATCPSCR 174
>Os08g0445000 Similar to RING-H2 finger protein ATL5A
Length = 501
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 183 DLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
D C+VCL +F +++R LP C H FHV CID WL+ H +CPLCRR L
Sbjct: 149 DPFDCAVCLCEFADDDRLRLLPKCSHAFHVDCIDTWLLSHSTCPLCRRSL 198
>AK064102
Length = 357
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 156 TNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCI 215
T G+ A+I + T EYR +G C+VCL +F+ GE VR LP C H FH PCI
Sbjct: 131 TVGLDEATITSI----ATAEYR-AGVGWGGDCAVCLGEFRDGELVRLLPRCSHPFHAPCI 185
Query: 216 DGWLIKHGSCPLCRRKL 232
D WL H +CPLCR +
Sbjct: 186 DTWLRAHVNCPLCRSPV 202
>Os06g0537300
Length = 174
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 166 KLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSC 225
K+PE R G+ CSVCL Q GE VR LP C H++HV CID WL H +C
Sbjct: 84 KIPEFAYAGSARHGGGGE---CSVCLGAVQGGEAVRRLPACKHLYHVECIDMWLASHATC 140
Query: 226 PLCRRKL 232
P+CR ++
Sbjct: 141 PICRTEV 147
>Os06g0539800
Length = 167
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 166 KLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSC 225
K+PE R G+ CSVCL Q GE VR LP C H++HV CID WL H +C
Sbjct: 77 KIPEFAYAGSARHGGGGE---CSVCLGAVQGGEAVRRLPACKHLYHVECIDMWLASHATC 133
Query: 226 PLCRRKL 232
PLCR ++
Sbjct: 134 PLCRTEV 140
>Os06g0534900 Zinc finger, RING-type domain containing protein
Length = 412
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
C+VCL+D GE VR LP C H+FHV CID WL H +CPLCRR L
Sbjct: 148 CAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCPLCRRDL 193
>Os04g0590900 Similar to RING-H2 finger protein ATL1B
Length = 383
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 154 EGTNGMPRASIDKLPEVRITE-EYRR-NAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFH 211
E N P + +D+ +IT +YRR + + CSVCL +F GE +R LP C H FH
Sbjct: 122 ESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFH 181
Query: 212 VPCIDGWLIKHGSCPLCRRKL 232
CID WL H +CPLCR +
Sbjct: 182 QQCIDTWLKSHSNCPLCRANI 202
>Os11g0703300
Length = 170
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%)
Query: 173 TEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
T YRR+ + C VCL +F GE +R LP+C H FH CID WL +CPLCR
Sbjct: 104 TSTYRRDDGWKETACPVCLSEFADGELIRLLPECMHYFHAACIDEWLRTRATCPLCR 160
>Os02g0572350 Zinc finger, RING-type domain containing protein
Length = 325
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 31/43 (72%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
C VCL +F+ GE +R LP C H FHVPCID WL H +CPLCR
Sbjct: 109 CPVCLGEFRDGELLRLLPKCGHAFHVPCIDAWLRAHVNCPLCR 151
>AK109940
Length = 373
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 185 SGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
+ C VCL +F+ GE +R LP C H FHVPCID WL H +CPLCR
Sbjct: 155 TDCPVCLGEFRDGELLRLLPKCGHAFHVPCIDAWLRAHVNCPLCR 199
>Os01g0802000 Zinc finger, RING-type domain containing protein
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 154 EGTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVP 213
+G P+++ID +P V+I + R D C VC F+ G + R +P C H++H
Sbjct: 163 QGPPPAPQSAIDSMPVVKINLRHLR----DDPHCPVCTDKFEVGTEAREMP-CKHLYHAE 217
Query: 214 CIDGWLIKHGSCPLCRRKL 232
CI WL++H SCP+CR L
Sbjct: 218 CIIPWLVQHNSCPVCRHPL 236
>Os01g0755700 Zinc finger, RING-type domain containing protein
Length = 238
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 158 GMPRASIDKLPEVRITEEYRRNAIGDLSG----CSVCLQDFQTGEKVRSLPDCWHVFHVP 213
G+ ++I LP T Y + A GD +G C++CL Q + VR LP C HVFHV
Sbjct: 88 GLDPSAIAALP----TAAYGKVAGGDAAGGTTECAICLGAMQEADAVRVLPACRHVFHVA 143
Query: 214 CIDGWLIKHGSCPLCR 229
CID WL SCP+CR
Sbjct: 144 CIDKWLASSSSCPVCR 159
>Os03g0149800 Similar to RING-H2 finger protein ATL1D
Length = 300
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 151 FEIEGTNGMPRASIDKLPEVRITEEYRRNAIGDLSG---CSVCLQDFQTGEKVRSLPDCW 207
+E E G+ + LP V+ YRR A G + C+VCL +F E+++ LP C
Sbjct: 87 YEAEVGGGLDPDVVAALPVVK----YRRAASGKSASPQECAVCLSEFVRDERLKLLPSCS 142
Query: 208 HVFHVPCIDGWLIKHGSCPLCR 229
H FH+ CID WL + SCPLCR
Sbjct: 143 HAFHIDCIDTWLHHNVSCPLCR 164
>Os01g0736600 Zinc finger, RING-type domain containing protein
Length = 197
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 146 ESPDLFE-----IEGTNGMPRASIDKLPEVRITEEYRRNAIGDLSG-CSVCLQDFQTGEK 199
ESPD + G+ A+I P+V + A D CS+CL ++ GE
Sbjct: 79 ESPDAYSSGVAAASSPVGLDPAAIASYPKV----PFYSGAGADADAMCSICLSEYADGEM 134
Query: 200 VRSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
+R +PDC H FHV C+D WL ++ SCP+CR
Sbjct: 135 LRVMPDCRHRFHVCCLDAWLRRNASCPVCR 164
>Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 321
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 139 VDSSPFRESPDLFEIEGTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGE 198
+D+SPF G+P A++ LP + L C+VCL + GE
Sbjct: 75 LDASPFPR----------RGLPAAALRALPVTVYAKPAAARGEEALE-CAVCLSEVADGE 123
Query: 199 KVRSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
KVR LP C H FHV CID W H +CPLCR
Sbjct: 124 KVRMLPKCDHGFHVECIDMWFHSHDTCPLCR 154
>Os02g0743100 Zinc finger, RING-type domain containing protein
Length = 396
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 140 DSSPFRESPDLFEIEGTNGMPRASIDKLPEVRITEEYRRNAIGDLS--GCSVCLQDFQTG 197
D++ R+ LF + + G+ +A ID LP YR GD C+VCL +F
Sbjct: 108 DAAMDRQLQQLFHLHDS-GLDQAFIDALPVF----AYRDIVGGDKEPFDCAVCLCEFDGE 162
Query: 198 EKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
+++R LP C H FH+ CID WL+ + +CPLCR L
Sbjct: 163 DRLRLLPVCGHAFHLHCIDTWLLSNSTCPLCRGTL 197
>Os01g0822800 Similar to RING-H2 finger protein ATL3C
Length = 208
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
C++CL +F GEKVR LP C H FHV C+D WL+ H SCP CR
Sbjct: 124 CAICLGEFADGEKVRVLPRCGHGFHVRCVDTWLVSHDSCPTCR 166
>Os12g0115600
Length = 170
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
C++CL DF G+KVR LP C H FHV CID WL H SCP CR +
Sbjct: 113 CAICLGDFADGDKVRVLPRCHHGFHVGCIDTWLAAHTSCPTCRDSI 158
>Os02g0249200
Length = 166
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
C++CL + GE VR LP+C H+FHV C+D WL H +CPLCRR +
Sbjct: 110 CAICLGVVRDGEAVRRLPECKHLFHVECVDMWLYSHATCPLCRRDV 155
>Os06g0537500
Length = 223
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 167 LPEVRITEEYRRNAIGD----------LSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCID 216
+P + RRN GD + CSVCL FQ GE VR LP C H++H CID
Sbjct: 134 VPAFTYSRSVRRNVGGDDGEEEETAAAAAACSVCLGAFQLGETVRLLPACLHLYHAECID 193
Query: 217 GWLIKHGSCPLCR 229
WL H +CPLCR
Sbjct: 194 PWLDAHTTCPLCR 206
>Os01g0311100
Length = 249
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
C+VCL +F+ G+K R+LP C H FHV CID W ++ +CPLCR
Sbjct: 147 CAVCLAEFEAGDKARALPRCGHRFHVECIDAWFRENSTCPLCR 189
>Os09g0554200 Zinc finger, RING-type domain containing protein
Length = 201
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 147 SPDLFEIEGTNGMP--------RASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGE 198
+P F +E MP R ++ LP V E + C++CL +F G+
Sbjct: 58 NPSSFAVEAEEAMPPAPCKGLKRKALLSLPTVSFAEAAAAEEEEERPECAICLAEFARGD 117
Query: 199 KVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
+VR LP C H FH C+D WL+ +CP CRR +
Sbjct: 118 EVRVLPPCGHGFHAACVDVWLVSTSTCPSCRRAI 151
>Os03g0391100
Length = 417
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 155 GTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTG-EKVRSLPDCWHVFHVP 213
G G+ A+++ LP + A C+VCL +F G EK+R LP C HVFH
Sbjct: 120 GRAGLDVAAMEALPVLTYATARAVKAGRGALECAVCLAEFADGGEKLRLLPGCCHVFHAA 179
Query: 214 CIDGWLIKHGSCPLCRRKL 232
CID WL H +CP+CR L
Sbjct: 180 CIDVWLAAHVTCPVCRADL 198
>Os12g0596200 Similar to RING-H2 protein
Length = 310
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
C+VCL +F G+++R+LP C H FH CID WL H SCPLCR
Sbjct: 104 CAVCLLEFADGDELRALPLCAHAFHADCIDVWLRAHASCPLCR 146
>Os02g0686100 Similar to RING-H2 finger protein ATL1B
Length = 189
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 156 TNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCI 215
G+ + + LP V + G+ C++CL +F+ G+ VR LP C H FH CI
Sbjct: 72 NKGVKKEVLRSLPTVTYVSD---GGGGEAEECAICLVEFEDGQAVRVLPQCDHRFHAACI 128
Query: 216 DGWLIKHGSCPLCRRKL 232
D WL H SCP CRR L
Sbjct: 129 DTWLRAHSSCPSCRRVL 145
>Os09g0468300 Zinc finger, RING-type domain containing protein
Length = 392
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 158 GMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDG 217
G+ ++ + P + + ++ C+VC+ +F E +R LP C HVFH CID
Sbjct: 96 GLDQSVLATFPTMAYADVKAHKSVKGALECAVCISEFDDDETLRLLPKCSHVFHQDCIDT 155
Query: 218 WLIKHGSCPLCRRKL 232
WL H +CP+CR L
Sbjct: 156 WLASHATCPVCRANL 170
>Os03g0812200 Zinc finger, RING-type domain containing protein
Length = 369
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 155 GTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPC 214
GT + +++ LP V I E + GCSVCL+DF+ G + + +P C H FH C
Sbjct: 232 GTPPAKKEAVEALPTVNIQE---------VLGCSVCLEDFEMGTEAKEMP-CQHKFHSQC 281
Query: 215 IDGWLIKHGSCPLCRRKL 232
I WL H SCP+CR +L
Sbjct: 282 ILPWLELHSSCPICRFQL 299
>Os02g0572300
Length = 348
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 162 ASIDKLPEVRITEEYRRNAIGDLSG----CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDG 217
A I LP V + RR+ IGD G C+VCL +F+ + +R LP C H FH CI
Sbjct: 101 AEIAALPLVSY-RDARRHRIGDARGDPLECAVCLLEFEDDDALRLLPACPHAFHPECIGL 159
Query: 218 WLIKHGSCPLCR 229
WL KH +CPLCR
Sbjct: 160 WLEKHVTCPLCR 171
>Os02g0541500
Length = 202
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 182 GDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
G C++CL D + GE+VR LP C H FHV C+D WL+ +CP CR+ L
Sbjct: 128 GPSPACAICLADLEPGERVRVLPKCNHGFHVRCVDRWLLARSTCPTCRQPL 178
>Os06g0536600
Length = 239
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
C+VCL + GE VR LP C HV+H CID WL H +CPLCRR+L
Sbjct: 182 CAVCLGAVREGEMVRRLPACEHVYHADCIDRWLAAHRTCPLCRREL 227
>Os06g0536100
Length = 190
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
C+VCL + GE VR LP C HV+H CID WL H +CPLCRR+L
Sbjct: 119 CAVCLGAVREGEMVRRLPACEHVYHADCIDRWLAAHRTCPLCRREL 164
>Os03g0351800 Zinc finger, RING-type domain containing protein
Length = 283
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 161 RASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLI 220
++SID +P V+IT+ R+ GD S C VC F+ G + R +P C H++H CI WL
Sbjct: 165 QSSIDAMPTVKITQ---RHLSGD-SHCPVCKDKFELGSEAREMP-CKHLYHSDCIVPWLE 219
Query: 221 KHGSCPLCRRKL 232
+H SCP+CR +L
Sbjct: 220 QHNSCPVCRYEL 231
>Os06g0540400 Zinc finger, RING-type domain containing protein
Length = 168
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
CSVCL + GE VR LP C H++HV CID WL H +CPLCR ++
Sbjct: 104 CSVCLGAVRGGEMVRRLPACKHLYHVECIDMWLASHATCPLCRTEV 149
>Os06g0155200
Length = 221
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%)
Query: 175 EYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCR 229
E A G + CS+CL + GE VR LP C H+FH C+D WL H +CPLCR
Sbjct: 153 EQTAAAAGGWAQCSICLGLARVGEAVRRLPSCGHLFHAGCVDEWLRAHATCPLCR 207
>Os01g0830900
Length = 189
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 187 CSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGWLIKHGSCPLCRRKL 232
CS+CL +F+ GEKV++LP C H FH C+D WL SCPLCR L
Sbjct: 127 CSICLGEFEEGEKVKALPLCGHGFHPECVDAWLRSRPSCPLCRSSL 172
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.140 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,026,822
Number of extensions: 323041
Number of successful extensions: 1591
Number of sequences better than 1.0e-10: 69
Number of HSP's gapped: 1632
Number of HSP's successfully gapped: 69
Length of query: 232
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 134
Effective length of database: 11,918,829
Effective search space: 1597123086
Effective search space used: 1597123086
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 154 (63.9 bits)