Os01g0802000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os01g0802000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.04 | 0.244 | 10.3 | -0.418 | 0.696 | 0.351 | -0.116 | 0.773 | -0.0399 | 0.53 | 20.72 | 1272 | -- | -- |
| 27.48 | 0.244 | 10.3 | -0.611 | 0.666 | 0.409 | -0.0374 | -- | -0.0897 | 0.563 | 21.25 | 1144 | -- | -- |
| 27.09 | 0.242 | 10.3 | -0.423 | 0.699 | 0.349 | -- | 0.734 | -0.0421 | 0.532 | 20.9 | 1283 | -- | -- |
| 27.33 | 0.243 | 10.3 | -0.628 | 0.663 | 0.411 | -- | -- | -0.0878 | 0.67 | 22.86 | 1120 | -- | -- |
| 51.23 | 0.333 | 10.3 | -0.787 | -- | 0.747 | -- | -0.568 | -0.12 | -- | 23.9 | 1011 | -- | -- |
| 32.51 | 0.267 | 10.3 | -0.501 | 0.749 | -- | -0.00822 | -- | -0.0123 | 0.633 | -- | -- | -- | -- |
| 32.51 | 0.267 | 10.3 | -0.501 | 0.749 | -- | -- | -- | -0.0122 | 0.633 | -- | -- | -- | -- |
| 51.22 | 0.333 | 10.3 | -0.68 | -- | 0.726 | -- | -- | -0.101 | -- | 23.9 | 1018 | -- | -- |
| 36.61 | 0.282 | 10.3 | -- | 0.707 | 0.235 | -- | -- | 0.0606 | 0.552 | 27.88 | 1256 | -- | -- |
| 67.65 | 0.384 | 10.3 | -0.474 | -- | -- | -- | -- | 0.00084 | -- | -- | -- | -- | -- |
| 39.12 | 0.293 | 10.3 | -- | 0.741 | -- | -- | -- | 0.0435 | 0.601 | -- | -- | -- | -- |
| 62.69 | 0.369 | 10.3 | -- | -- | 0.574 | -- | -- | -0.00442 | -- | 24.1 | 1008 | -- | -- |
| 73.58 | 0.4 | 10.3 | -- | -- | -- | -- | -- | 0.0534 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.52 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 15 |
| 2 | 26.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 10 | 26.62 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 63 | 26.80 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 99 | 26.87 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 111 | 26.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 138 | 26.90 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 359 | 27.07 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 538 | 27.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 561 | 27.19 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 562 | 27.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 565 | 27.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 580 | 27.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 609 | 27.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 703 | 27.24 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 714 | 27.25 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 3 |
| 874 | 27.31 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |
| 951 | 27.34 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 973 | 27.35 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 978 | 27.35 | radiation | 30 | 1440 | < th | dose dependent | rect. | 16 | 1 |