BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0802000 Os01g0802000|AK103314
(329 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0802000 Zinc finger, RING-type domain containing protein 645 0.0
Os05g0495000 242 3e-64
Os03g0351800 Zinc finger, RING-type domain containing protein 224 7e-59
Os02g0767600 122 3e-28
Os05g0110000 Zinc finger, RING-type domain containing protein 110 1e-24
Os10g0487400 Zinc finger, RING-type domain containing protein 109 3e-24
Os01g0972000 Zinc finger, RING-type domain containing protein 105 7e-23
Os03g0812200 Zinc finger, RING-type domain containing protein 100 3e-21
Os03g0324900 Zinc finger, RING-type domain containing protein 98 1e-20
Os05g0488800 Zinc finger, RING-type domain containing protein 97 1e-20
Os06g0101300 Zinc finger, RING-type domain containing protein 96 3e-20
Os01g0276600 Zinc finger, RING-type domain containing protein 94 2e-19
Os11g0119200 Zinc finger, RING-type domain containing protein 93 2e-19
Os12g0118700 Zinc finger, RING-type domain containing protein 91 1e-18
Os03g0271600 Zinc finger, RING-type domain containing protein 89 3e-18
Os02g0727700 Zinc finger, RING-type domain containing protein 77 2e-14
Os09g0434200 Zinc finger, RING-type domain containing protein 75 5e-14
Os08g0487500 Zinc finger, RING-type domain containing protein 72 5e-13
Os06g0717600 Zinc finger, RING-type domain containing protein 67 2e-11
Os11g0142800 67 2e-11
Os12g0139100 67 2e-11
Os07g0631200 Zinc finger, RING-type domain containing protein 67 2e-11
Os08g0464400 Zinc finger, RING-type domain containing protein 65 6e-11
>Os01g0802000 Zinc finger, RING-type domain containing protein
Length = 329
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/329 (95%), Positives = 313/329 (95%)
Query: 1 MPNRATHWCYACRRPIRVSGQDITCPNCNDGFIQEISEIGGSLNTYGIFDPSFDERRDRS 60
MPNRATHWCYACRRPIRVSGQDITCPNCNDGFIQEISEIGGSLNTYGIFDPSFDERRDRS
Sbjct: 1 MPNRATHWCYACRRPIRVSGQDITCPNCNDGFIQEISEIGGSLNTYGIFDPSFDERRDRS 60
Query: 61 FGMVEAMSDLMRQRMAEMGRNRVLDFHGTRGASSHQGRQPTVRPMLIFGSNAPDRVSSSS 120
FGMVEAMSDLMRQRMAEMGRNRVLDFHGTRGASSHQGRQPTVRPMLIFGSNAPDRVSSSS
Sbjct: 61 FGMVEAMSDLMRQRMAEMGRNRVLDFHGTRGASSHQGRQPTVRPMLIFGSNAPDRVSSSS 120
Query: 121 EEADILLRQGRRIGADRPNFSRFLVGPSLEALFEQLLLHNNRQGPPPAPQSAIDSMPVVK 180
EEADILLRQGRRIGADRPNFSRFLVGPSLEALFEQLLLHNNRQGPPPAPQSAIDSMPVVK
Sbjct: 121 EEADILLRQGRRIGADRPNFSRFLVGPSLEALFEQLLLHNNRQGPPPAPQSAIDSMPVVK 180
Query: 181 INLRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLPXXX 240
INLRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP
Sbjct: 181 INLRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLPSSS 240
Query: 241 XXXXXXXXXXXXXNEAISHGVARSDADPVPVARSDDSRNHEMHGSFSFLWPFDSPTPDSS 300
NEAISHGVARSDADPVPVARSDDSRNHEMHGSFSFLWPFDSPTPDSS
Sbjct: 241 HRSGSTRSSSTHSNEAISHGVARSDADPVPVARSDDSRNHEMHGSFSFLWPFDSPTPDSS 300
Query: 301 SYTHEGGVGEPTVHDDAGQMTYSEWHYDY 329
SYTHEGGVGEPTVHDDAGQMTYSEWHYDY
Sbjct: 301 SYTHEGGVGEPTVHDDAGQMTYSEWHYDY 329
>Os05g0495000
Length = 350
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 182/336 (54%), Gaps = 57/336 (16%)
Query: 1 MPNRATHWCYACRRPIRVSG--QDITCPNCNDGFIQEISEIG--GSLNTYGIFDP-SFDE 55
M NRATHWCY CRRP+R+ G QD+TCP+C+DGF+QE+SE+G + +T G P + DE
Sbjct: 65 MSNRATHWCYVCRRPVRIRGGSQDVTCPSCDDGFVQEMSEMGRRTASSTLGFVGPDAGDE 124
Query: 56 RRDRSFGMVEAMSDLMRQRMAEMGRNRVLDFHGTRGASSHQGRQPTVRPMLIFGSNAPDR 115
R ++EAMS LMR G R +D H G G P
Sbjct: 125 FLLRRSPVMEAMSTLMRHAATVGGDEREVDVHDEHGG----------------GDGVP-- 166
Query: 116 VSSSSEEADILLRQGRRIGADRPNFSRFLVGPSLEALFEQLL--LHNNRQGPPPAPQSAI 173
+ +L R G R+G +R + G LEALFEQL L ++RQGPPPAP SAI
Sbjct: 167 ---AHARLGVLFRGGPRVGVER-RGGYYRAG--LEALFEQLQNQLGSSRQGPPPAPPSAI 220
Query: 174 DSMPVVKINLRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCR 233
D+MPVV I+ RHLR +P CPVC D+F++G EAREMPC HLYHA+CI+PWLV HNSCPVCR
Sbjct: 221 DAMPVVTISRRHLRAEPRCPVCQDEFQLGAEAREMPCAHLYHADCIVPWLVHHNSCPVCR 280
Query: 234 HPLPXXXXXXXXXXXXXXXXNEAISHGVARSDADPVPVARSDDSRNHEMHGSFSFLWPFD 293
H LP + GS SFLWPF
Sbjct: 281 HSLPPPATTAS--------------------------GGGASGGERQVRRGSRSFLWPFG 314
Query: 294 SPTPDSSSYTHEGGVGEPTVHDDAGQMTYSEWHYDY 329
+ S S+ E G + TV++D G++ Y WHY++
Sbjct: 315 PTSSTSHSHECEDGSSDTTVYEDPGKVRYIRWHYNH 350
>Os03g0351800 Zinc finger, RING-type domain containing protein
Length = 283
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 160/290 (55%), Gaps = 18/290 (6%)
Query: 3 NRATHWCYACRRPIRVSGQDITCPNCNDGFIQEISEIGGSLNTYGIFDPSFDERRDRSFG 62
R ++WCY CR+ +R GQD+ CP C+ GF+ E+ ++ + + DP F RD FG
Sbjct: 4 GRQSYWCYQCRQRVRPRGQDMECPYCDSGFVSEMDDVDALMRHFVGMDPDF--HRDPRFG 61
Query: 63 MVEAMSDLMRQRMAEMGRNRVLDFHGTRGASSHQGRQPTVRPMLIFGSNAPDRVSSSSEE 122
++EA+S +MR MA G NR +D G S + P L+F P +S +
Sbjct: 62 IMEAISAVMRHGMA--GTNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLSEDNG- 118
Query: 123 ADILLRQGRRIGADRPNFSRFLVGPSLEALFEQLLLHNNRQGPPPAPQSAIDSMPVVKIN 182
D+ + R +G R N + + VGP L+ L EQL N+R+GPPPA QS+ID+MP VKI
Sbjct: 119 FDVFINGRRGVGMRRANIADYFVGPGLDDLIEQLT-QNDRRGPPPATQSSIDAMPTVKIT 177
Query: 183 LRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLPXXXXX 242
RHL D HCPVC DKFE+G+EAREMPCKHLYH++CI+PWL QHNSCPVCR+ LP
Sbjct: 178 QRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQSST 237
Query: 243 XXXXXXXXXXXNEAISHGVARSDADPVPVARSDDSRNHEMHGSFSFLWPF 292
S R++ FSFLWPF
Sbjct: 238 GASCSRTRSTNQSQSSSSNGRTNG------------RQRRRNPFSFLWPF 275
>Os02g0767600
Length = 335
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 89/178 (50%), Gaps = 9/178 (5%)
Query: 143 FLVGPSLEALFEQLLLHNNRQGPPPAPQSAIDSMPVVKINLRHLRDDPHCPVCTDKFEVG 202
+ GP+L L E+L N+R GP PAP SAIDS+P V+I HL D CPVC + FE+G
Sbjct: 151 YFNGPNLNNLIEELT-QNDRPGPAPAPSSAIDSLPTVQITGAHLSDGSQCPVCKEDFELG 209
Query: 203 TEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLPXXXXXXXXXXXXXXXXNEAISHGVA 262
AR+MPCKH+YH++CI+PWL HNSCPVCR+ L N G A
Sbjct: 210 EAARQMPCKHVYHSDCIVPWLRLHNSCPVCRYQL-------LSSAAAGSNANSRARRGSA 262
Query: 263 RSDADPVPVARSDDSRNHEMHGSFSFLWPFDSPTPDSSSYTHEGGVGEPTVHDDAGQM 320
+ D + G FS++WP D G G P D G+M
Sbjct: 263 NNGGGGGGGDGRDREQTIVRWGPFSWMWPPRG-LEDPDDGWEYGRRGRPEAGDAGGRM 319
>Os05g0110000 Zinc finger, RING-type domain containing protein
Length = 333
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 66/105 (62%), Gaps = 7/105 (6%)
Query: 139 NFSRFLVGPSLEALFEQLL------LHNNRQGPPPAPQSAIDSMPVVKINLRHLRDDPHC 192
S FL+G E L +QL L R+ PP A +++++SMP V I H+ D HC
Sbjct: 85 TMSDFLMGSGFERLLDQLTQIEAGGLARARENPP-ASKASVESMPTVTIAASHVGADSHC 143
Query: 193 PVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
VC + FE+G EAREMPC H+YH +CI+PWL NSCPVCRH +P
Sbjct: 144 AVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEMP 188
>Os10g0487400 Zinc finger, RING-type domain containing protein
Length = 304
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 70/111 (63%), Gaps = 6/111 (5%)
Query: 130 GRRIGADRPNFSRFLVGPSLEALFEQLLLHN-NRQGPPPAPQSAIDSMP--VVKINLRHL 186
GR GA +F + VGP LE L EQL ++ NR G PPA +SA+ ++P VV +
Sbjct: 108 GRVGGA---SFGDYFVGPGLEQLIEQLTENDPNRYGTPPAAKSALSTLPDVVVTDAMVAA 164
Query: 187 RDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
D C VC + F G A++MPCKH+YHA+CI+PWL HNSCP+CR LP
Sbjct: 165 ADGAECAVCKEDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPICRFELP 215
>Os01g0972000 Zinc finger, RING-type domain containing protein
Length = 334
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Query: 148 SLEALFEQLLLH--NNRQGP-PPAPQSAIDSMPVVKINLRHLRDDPHCPVCTDKFEVGTE 204
+L LF++LLL + P PPA ++A+DSMP + I HL D HC VC + F + E
Sbjct: 84 ALRPLFDRLLLRIPSASDNPNPPASKAAVDSMPTILIGACHLAADSHCAVCKEPFHLAAE 143
Query: 205 AREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
AREMPC H+YH CI+PWL HNSCPVCRH +P
Sbjct: 144 AREMPCAHIYHHNCILPWLALHNSCPVCRHRMP 176
>Os03g0812200 Zinc finger, RING-type domain containing protein
Length = 369
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 139 NFSRFLVGPSLEALFEQLLLHN-NRQGPPPAPQSAIDSMPVVKINLRHLRDDPHCPVCTD 197
+ + +GP L+ L + L + NR G PPA + A++++P V I ++ C VC +
Sbjct: 206 SLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNI-----QEVLGCSVCLE 260
Query: 198 KFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
FE+GTEA+EMPC+H +H++CI+PWL H+SCP+CR LP
Sbjct: 261 DFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLP 300
>Os03g0324900 Zinc finger, RING-type domain containing protein
Length = 320
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 161 NRQGPPPAPQSAIDSMPVVKINLRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECII 220
NRQG PPA + A+ ++P V++ H CPVC D+FE G EAREMPCKH +H CI+
Sbjct: 184 NRQGTPPARKEAVAALPTVRV---HDAAGATCPVCLDEFEAGGEAREMPCKHRFHDGCIL 240
Query: 221 PWLVQHNSCPVCRHPLP 237
PWL H+SCPVCR+ LP
Sbjct: 241 PWLEAHSSCPVCRYQLP 257
>Os05g0488800 Zinc finger, RING-type domain containing protein
Length = 323
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 32/245 (13%)
Query: 11 ACRRPIRVSGQDITCPNCNDGFIQEISEIGGSLNTYGIFDPSFDE--------------R 56
+C + +I CP+C GF++E+++ T +P F +
Sbjct: 14 SCNHKVLAMVDEIKCPSCGGGFVEEMTDEEIERLTNRQPEPGFSQWNPIEHPGETMDSDD 73
Query: 57 RDRSFGMVEAMSDLMRQRMAEMGRNRVLD-FHGTRGASSHQGRQPTVRPMLIFGSNAPDR 115
D G E + R R A R RVLD H + Q R ++ LI N
Sbjct: 74 EDNDLGR-EFEGFIRRHRRASTLR-RVLDSIHDD--LADDQERDSSI---LINAFNQALA 126
Query: 116 VSSSSEEADILLRQGRRIGA--DRPNFSRFLVGPSLEALFEQLLLHN-NRQGPPPAPQSA 172
+ S + D QG + G+ D +++G L L + L + +R G PPA + A
Sbjct: 127 LQGSVLDPD--EGQGDQGGSTNDDGLLEEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEA 184
Query: 173 IDSMPVVKINLRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVC 232
++++P VKI + C VC D EVG++A++MPC+H +H+ CI+PWL H+SCPVC
Sbjct: 185 VEALPTVKI-----EEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVC 239
Query: 233 RHPLP 237
R LP
Sbjct: 240 RFELP 244
>Os06g0101300 Zinc finger, RING-type domain containing protein
Length = 338
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 143 FLVGPSLEALFEQLLLHN-NRQGPPPAPQSAIDSMPVVKINLRHLRDD--PHCPVCTDKF 199
+ VG LE L +QL ++ NR G PPA +SA+ ++P V ++ + D C VC D F
Sbjct: 150 YFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDVAVSADMMAADGGAQCAVCMDDF 209
Query: 200 EVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
+G A+++PCKH++H +CI+PWL H+SCPVCR LP
Sbjct: 210 HLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELP 247
>Os01g0276600 Zinc finger, RING-type domain containing protein
Length = 329
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 135 ADRPNFSRFLVGPSLEALFEQLLLHN-NRQGPPPAPQSAIDSMPVVKINLRHLRDDPHCP 193
A+ + + +GP L+AL +++ + RQG PA + A++SMP V++ D C
Sbjct: 156 AEGVALADYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGG-DCDSACA 214
Query: 194 VCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
VC + + G A EMPC+H +HA+CI+PWL H+SCPVCR LP
Sbjct: 215 VCLEDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLP 258
>Os11g0119200 Zinc finger, RING-type domain containing protein
Length = 491
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 143 FLVGPSLEALFEQLLLHNN-RQGPPPAPQSAIDSMPVVKINLRH-LRDDPHCPVCTDKFE 200
++ E L EQ N+ R+G PPA S I+++P V I+ H + DD CPVC D
Sbjct: 275 YVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPIP 334
Query: 201 VGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
A+++PC HLYH+ CI+PW N+CPVCR+ LP
Sbjct: 335 TRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELP 371
>Os12g0118700 Zinc finger, RING-type domain containing protein
Length = 499
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 143 FLVGPSLEALFEQLLLHNN-RQGPPPAPQSAIDSMPVVKINLRHLRD-DPHCPVCTDKFE 200
++ E L EQ N+ R+G PPA S I+++P V I+ H + D CPVC D
Sbjct: 283 YVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIP 342
Query: 201 VGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
A+++PC HLYH+ CI+PWL N+CPVCR+ LP
Sbjct: 343 TRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELP 379
>Os03g0271600 Zinc finger, RING-type domain containing protein
Length = 279
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 139 NFSRFLVGPSLEALFEQLLLHNNRQGPPPAPQSAIDSMPVVKINLRHLRDDPHCPVCTDK 198
+ S L+G L +Q PPA ++A++SMP V + HC VC +
Sbjct: 86 DVSHLLMGSGFHRLLDQFSRLEAAAPRPPASKAAVESMPSVTVA----GSGAHCAVCQEA 141
Query: 199 FEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPL 236
FE G AREMPCKH+YH +CI+PWL NSCPVCR L
Sbjct: 142 FEPGASAREMPCKHVYHQDCILPWLSLRNSCPVCRREL 179
>Os02g0727700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 173 IDSMPVVKINLRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVC 232
++S+P V ++ R D C VC D E G AR +PC HLYH CI+PWL N+CP+C
Sbjct: 214 VESLPTVVVDAA--RGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLC 271
Query: 233 RHPLP 237
RH LP
Sbjct: 272 RHELP 276
>Os09g0434200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 140 FSRFLVGPSLEALFEQLLLHNNRQGP--PPAPQSAIDSMPVVKIN---LRHLRDDPHCPV 194
+ V LEA E+ L N P PPA + + ++PVV + + L + C V
Sbjct: 184 LNTMTVDGDLEAALEESL-QNVMANPKVPPASKEVVANLPVVTVTEEIIARLGKETQCAV 242
Query: 195 CTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPL 236
C + V + +E+PCKHL+H C+ PWL ++NSCP+CRH L
Sbjct: 243 CRESLLVDDKMQELPCKHLFHPPCLKPWLDENNSCPICRHEL 284
>Os08g0487500 Zinc finger, RING-type domain containing protein
Length = 271
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 163 QGPPPAPQSAIDSMPVVKINLRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPW 222
+ PPA +SA++++P + + C VC D G + +PC H YH ECI+PW
Sbjct: 180 KSKPPAARSAVEALPSAVVAAGEDGEGEECAVCRDGVAAGERVKRLPCSHGYHEECIMPW 239
Query: 223 LVQHNSCPVCRHPLP 237
L NSCP+CR LP
Sbjct: 240 LDVRNSCPLCRFELP 254
>Os06g0717600 Zinc finger, RING-type domain containing protein
Length = 232
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 163 QGPPPAPQSAIDSMPVVKINLRHLR----DDPHCPVCTDKFEVGTEAREMP-CKHLYHAE 217
+G P+++ID +P V+I + R D C VC F+ G + R +P C H++H
Sbjct: 154 EGTNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVP 213
Query: 218 CIIPWLVQHNSCPVCRHPL 236
CI WL++H SCP+CR L
Sbjct: 214 CIDGWLIKHGSCPLCRRKL 232
>Os11g0142800
Length = 231
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 131 RRIGADRPNFSRFLVGPSLEALFEQLLLHNNRQGPPPAPQSAIDSMPVVKINLRHLRDDP 190
R G D S F + L+ + Q N G PA AI ++P + + +
Sbjct: 85 RSGGLDDQATSGFSIVDLLDGIL-QADDDGNGGGATPASSMAIVNLPEITVG-DEKGEAK 142
Query: 191 HCPVCTDKFEVGTEAREMPC--KHLYHAECIIPWLVQHNSCPVCRHPLP 237
CPVC FE G + R+MPC H +H +CI WL+ + CP+CR PLP
Sbjct: 143 DCPVCLQGFEEGDKLRKMPCADSHCFHEQCIFSWLLINRHCPLCRFPLP 191
>Os12g0139100
Length = 228
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 160 NNRQGPPPAPQSAIDSMPVVKINLRHLRDDPHCPVCTDKFEVGTEAREMPC--KHLYHAE 217
N G PA AI S+P + + + CPVC FE G + R MPC H +H +
Sbjct: 113 GNGGGATPASSMAIVSLPEITVG-DEKGEAKDCPVCLQGFEEGDKLRRMPCADSHCFHEQ 171
Query: 218 CIIPWLVQHNSCPVCRHPLP 237
CI WLV + CP+CR PLP
Sbjct: 172 CIFSWLVINRHCPLCRFPLP 191
>Os07g0631200 Zinc finger, RING-type domain containing protein
Length = 185
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 164 GPPPAPQSAIDSMPVVKINLRHLRDDP--HCPVCTDKFEVGTEAREMPCKHLYHAECIIP 221
G PPA ++AI S+ VK D C +C D F G +EMPC H +H+EC+
Sbjct: 59 GVPPASKAAIASLKEVKAGEDGEGGDSLGDCAICLDAFAAG---KEMPCGHRFHSECLER 115
Query: 222 WLVQHNSCPVCRHPLP 237
WL H SCPVCR LP
Sbjct: 116 WLGVHGSCPVCRRELP 131
>Os08g0464400 Zinc finger, RING-type domain containing protein
Length = 211
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 192 CPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLPXXXXXXXXXXXXXX 251
C +C D + AR +PC HLYH+ECI+ WL NSCPVCR LP
Sbjct: 74 CAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRSRLP-------------- 119
Query: 252 XXNEAISHGVARSDADPVPV---ARSDDSRNHEMHGSFSFLWPFDSPTPDSSSYTHEGGV 308
++ A SD P P+ R +R S + SPT + + T EGG
Sbjct: 120 --SDEPQDAAAPSDPGPAPMRITIRLSTNRRRVRTSSDAAPPVAASPTQLAQAVTGEGGG 177
Query: 309 GEPTVHDDAGQMTYSEW 325
G ++ + SEW
Sbjct: 178 GP----ANSTETVSSEW 190
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,664,397
Number of extensions: 565018
Number of successful extensions: 1776
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 1809
Number of HSP's successfully gapped: 24
Length of query: 329
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 228
Effective length of database: 11,762,187
Effective search space: 2681778636
Effective search space used: 2681778636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)