Os03g0812200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0812200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, RING-type domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.84 | 0.198 | 12.6 | 0.913 | 0.569 | -0.749 | 0.226 | -1.27 | 0.346 | 19.5 | 22.73 | 19 | -- | -- |
| 18.88 | 0.202 | 12.5 | 1.11 | 0.598 | -0.882 | 0.238 | -- | 0.406 | 19.3 | 23 | 39 | -- | -- |
| 17.97 | 0.197 | 12.6 | 0.909 | 0.571 | -0.755 | -- | -1.27 | 0.347 | 19.5 | 22.7 | 18 | -- | -- |
| 18.96 | 0.203 | 12.5 | 1.11 | 0.607 | -0.864 | -- | -- | 0.406 | 19.4 | 23 | 50 | -- | -- |
| 33.78 | 0.272 | 12.6 | 0.876 | -- | -0.668 | -- | -1.23 | 0.332 | -- | 20.96 | 13 | -- | -- |
| 29.55 | 0.255 | 12.6 | 0.958 | 0.544 | -- | 0.571 | -- | 0.276 | 21.9 | -- | -- | -- | -- |
| 30.73 | 0.26 | 12.6 | 0.937 | 0.545 | -- | -- | -- | 0.276 | 21.7 | -- | -- | -- | -- |
| 35.16 | 0.277 | 12.5 | 1.08 | -- | -0.747 | -- | -- | 0.389 | -- | 21.6 | 5 | -- | -- |
| 48.75 | 0.325 | 12.6 | -- | 0.563 | -0.563 | -- | -- | 0.195 | 20.3 | 25.4 | 49 | -- | -- |
| 48.36 | 0.325 | 12.6 | 0.942 | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
| 53.87 | 0.343 | 12.6 | -- | 0.548 | -- | -- | -- | 0.172 | 21.8 | -- | -- | -- | -- |
| 64.55 | 0.375 | 12.6 | -- | -- | -0.538 | -- | -- | 0.232 | -- | 23.1 | 6 | -- | -- |
| 71.76 | 0.395 | 12.6 | -- | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.05 | temperature | 20 | 30 | > th | dose dependent | sin | 22 | NA |
| 25 | 18.52 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 30 | 18.58 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 34 | 18.65 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 13 |
| 38 | 18.70 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 39 | 18.70 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 21 |
| 42 | 18.72 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 21 |
| 45 | 18.74 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 19 |
| 51 | 18.77 | temperature | 25 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 55 | 18.79 | temperature | 25 | 30 | > th | dose dependent | rect. | 9 | 17 |
| 59 | 18.80 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 62 | 18.82 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 82 | 18.88 | temperature | 25 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 191 | 19.05 | temperature | 25 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 251 | 19.17 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 272 | 19.20 | temperature | 25 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 378 | 19.43 | temperature | 25 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 682 | 20.08 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 952 | 20.59 | temperature | 30 | 30 | < th | dose dependent | sin | 21 | NA |
| 990 | 20.66 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |