BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0812200 Os03g0812200|AK067585
(369 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0812200 Zinc finger, RING-type domain containing protein 433 e-121
Os05g0488800 Zinc finger, RING-type domain containing protein 168 6e-42
Os01g0276600 Zinc finger, RING-type domain containing protein 144 1e-34
Os06g0101300 Zinc finger, RING-type domain containing protein 135 5e-32
Os10g0487400 Zinc finger, RING-type domain containing protein 132 6e-31
Os03g0324900 Zinc finger, RING-type domain containing protein 123 3e-28
Os03g0351800 Zinc finger, RING-type domain containing protein 117 1e-26
Os02g0767600 105 6e-23
Os05g0110000 Zinc finger, RING-type domain containing protein 100 2e-21
Os01g0802000 Zinc finger, RING-type domain containing protein 98 1e-20
Os01g0972000 Zinc finger, RING-type domain containing protein 92 7e-19
Os11g0119200 Zinc finger, RING-type domain containing protein 89 5e-18
Os05g0495000 88 1e-17
Os12g0118700 Zinc finger, RING-type domain containing protein 87 1e-17
Os03g0271600 Zinc finger, RING-type domain containing protein 84 2e-16
Os08g0487500 Zinc finger, RING-type domain containing protein 79 5e-15
Os07g0631200 Zinc finger, RING-type domain containing protein 78 1e-14
Os12g0140233 Zinc finger, RING-type domain containing protein 75 6e-14
Os12g0140700 Zinc finger, RING-type domain containing protein 75 7e-14
Os03g0286100 75 9e-14
Os02g0727700 Zinc finger, RING-type domain containing protein 75 9e-14
Os11g0142800 75 1e-13
Os08g0464400 Zinc finger, RING-type domain containing protein 74 2e-13
Os11g0142600 73 4e-13
Os03g0380100 72 7e-13
Os12g0139100 72 8e-13
Os01g0844700 70 2e-12
Os09g0434200 Zinc finger, RING-type domain containing protein 70 3e-12
Os02g0191500 Similar to Goliath homolog precursor (RING fin... 69 8e-12
Os09g0344900 Zinc finger, RING-type domain containing protein 68 1e-11
Os12g0140600 Zinc finger, RING-type domain containing protein 67 3e-11
>Os03g0812200 Zinc finger, RING-type domain containing protein
Length = 369
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/340 (67%), Positives = 229/340 (67%)
Query: 1 MEQGQGDRYWCHHCEEVIEPVEPDMKCPSCDSGFVEEMGSAGFEPSTNLRSDRISLWAPL 60
MEQGQGDRYWCHHCEEVIEPVEPDMKCPSCDSGFVEEMGSAGFEPSTNLRSDRISLWAPL
Sbjct: 1 MEQGQGDRYWCHHCEEVIEPVEPDMKCPSCDSGFVEEMGSAGFEPSTNLRSDRISLWAPL 60
Query: 61 LXXXXXXXXXXXXXXXXQIMXXXXXXXXXXXXXXXXXXXXXXLFRRQRRGSSLVXXXXXX 120
L QIM LFRRQRRGSSLV
Sbjct: 61 LLGMMGGSSRRARRLRRQIMEDDDDDDDDEDDEDDSDHELEDLFRRQRRGSSLVRLLQTL 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINSNN 180
INSNN
Sbjct: 121 RDDLRGLDDIGRDSDRDRERERRERERLRERERERERMRERERERRRERTESLILINSNN 180
Query: 181 EAIILQGTFGPXXXXXXXXXXXXGVSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEA 240
EAIILQGTFGP GVSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEA
Sbjct: 181 EAIILQGTFGPDDNQDDSSNTSSGVSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEA 240
Query: 241 VEALPTVNIQEVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLP 300
VEALPTVNIQEVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLP
Sbjct: 241 VEALPTVNIQEVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLP 300
Query: 301 TEESKNPCESAGGIVSVNDDGDDAGTSSDVDSANQPGSPI 340
TEESKNPCESAGGIVSVNDDGDDAGTSSDVDSANQPGSPI
Sbjct: 301 TEESKNPCESAGGIVSVNDDGDDAGTSSDVDSANQPGSPI 340
>Os05g0488800 Zinc finger, RING-type domain containing protein
Length = 323
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 103/133 (77%), Gaps = 2/133 (1%)
Query: 176 INSNNEAIILQGT-FGPXXXXXXXXXXXXGVSL-GDYFLGPGLDILLQHLAESDLNRSGT 233
IN+ N+A+ LQG+ P L +Y LG GL +LLQHLAESD +R+GT
Sbjct: 118 INAFNQALALQGSVLDPDEGQGDQGGSTNDDGLLEEYVLGAGLSLLLQHLAESDPSRNGT 177
Query: 234 PPAKKEAVEALPTVNIQEVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCP 293
PPAKKEAVEALPTV I+EV+ CSVCL+D E+G++AK+MPC+HKFHS CILPWLELHSSCP
Sbjct: 178 PPAKKEAVEALPTVKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCP 237
Query: 294 ICRFQLPTEESKN 306
+CRF+LP+EE+K+
Sbjct: 238 VCRFELPSEETKD 250
>Os01g0276600 Zinc finger, RING-type domain containing protein
Length = 329
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 85/114 (74%), Gaps = 4/114 (3%)
Query: 204 GVSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQEV----LGCSVCL 259
GV+L DYFLGPGLD L+Q + + D R GT PAKKEAVE++PTV + C+VCL
Sbjct: 158 GVALADYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDCDSACAVCL 217
Query: 260 EDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEESKNPCESAGG 313
ED+ G A EMPC+H+FH++CI+PWL++HSSCP+CRFQLPT++ + +SA G
Sbjct: 218 EDYAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPTDDDDDSSKSARG 271
>Os06g0101300 Zinc finger, RING-type domain containing protein
Length = 338
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 7/106 (6%)
Query: 205 VSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQEVL-------GCSV 257
+SLGDYF+G GL+ L+Q LAE+D NR GTPPA K AV ALP V + + C+V
Sbjct: 145 ISLGDYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDVAVSADMMAADGGAQCAV 204
Query: 258 CLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEE 303
C++DF +G AK++PC+H FH CILPWL+LHSSCP+CRF+LPT++
Sbjct: 205 CMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDD 250
>Os10g0487400 Zinc finger, RING-type domain containing protein
Length = 304
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 14/123 (11%)
Query: 204 GVSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQEVL-------GCS 256
G S GDYF+GPGL+ L++ L E+D NR GTPPA K A+ LP V + + + C+
Sbjct: 112 GASFGDYFVGPGLEQLIEQLTENDPNRYGTPPAAKSALSTLPDVVVTDAMVAAADGAECA 171
Query: 257 VCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEE-------SKNPCE 309
VC EDF G AK+MPC+H +H+ CI+PWL+LH+SCPICRF+LPT++ NP
Sbjct: 172 VCKEDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPICRFELPTDDPDYEGRKKSNPQP 231
Query: 310 SAG 312
+AG
Sbjct: 232 TAG 234
>Os03g0324900 Zinc finger, RING-type domain containing protein
Length = 320
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 72/97 (74%), Gaps = 6/97 (6%)
Query: 229 NRSGTPPAKKEAVEALPTVNIQEVLG--CSVCLEDFEMGTEAKEMPCQHKFHSQCILPWL 286
NR GTPPA+KEAV ALPTV + + G C VCL++FE G EA+EMPC+H+FH CILPWL
Sbjct: 184 NRQGTPPARKEAVAALPTVRVHDAAGATCPVCLDEFEAGGEAREMPCKHRFHDGCILPWL 243
Query: 287 ELHSSCPICRFQLPTEESKNPCESAGGIVSVNDDGDD 323
E HSSCP+CR+QLPT++ +AG +V + GD+
Sbjct: 244 EAHSSCPVCRYQLPTDDEP----TAGNVVVAAEGGDE 276
>Os03g0351800 Zinc finger, RING-type domain containing protein
Length = 283
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 205 VSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNI-QEVLG----CSVCL 259
++ DYF+GPGLD L++ L ++D R G PPA + +++A+PTV I Q L C VC
Sbjct: 134 ANIADYFVGPGLDDLIEQLTQND--RRGPPPATQSSIDAMPTVKITQRHLSGDSHCPVCK 191
Query: 260 EDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEES 304
+ FE+G+EA+EMPC+H +HS CI+PWLE H+SCP+CR++LP + S
Sbjct: 192 DKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQSS 236
>Os02g0767600
Length = 335
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 68/100 (68%), Gaps = 7/100 (7%)
Query: 205 VSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNI-----QEVLGCSVCL 259
+ G+YF GP L+ L++ L ++D R G PA A+++LPTV I + C VC
Sbjct: 146 IDPGNYFNGPNLNNLIEELTQND--RPGPAPAPSSAIDSLPTVQITGAHLSDGSQCPVCK 203
Query: 260 EDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQL 299
EDFE+G A++MPC+H +HS CI+PWL LH+SCP+CR+QL
Sbjct: 204 EDFELGEAARQMPCKHVYHSDCIVPWLRLHNSCPVCRYQL 243
>Os05g0110000 Zinc finger, RING-type domain containing protein
Length = 333
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 9/116 (7%)
Query: 206 SLGDYFLGPGLDILLQHLAESD---LNRSG-TPPAKKEAVEALPTVNIQEV-LG----CS 256
++ D+ +G G + LL L + + L R+ PPA K +VE++PTV I +G C+
Sbjct: 85 TMSDFLMGSGFERLLDQLTQIEAGGLARARENPPASKASVESMPTVTIAASHVGADSHCA 144
Query: 257 VCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEESKNPCESAG 312
VC E FE+G EA+EMPC H +H CILPWL L +SCP+CR ++PT+ ++ +AG
Sbjct: 145 VCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEMPTDAARPRPSNAG 200
>Os01g0802000 Zinc finger, RING-type domain containing protein
Length = 329
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 206 SLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNI-----QEVLGCSVCLE 260
+ + +GP L+ L + L + NR G PPA + A++++P V I ++ C VC +
Sbjct: 139 NFSRFLVGPSLEALFEQLLLHN-NRQGPPPAPQSAIDSMPVVKINLRHLRDDPHCPVCTD 197
Query: 261 DFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLP 300
FE+GTEA+EMPC+H +H++CI+PWL H+SCP+CR LP
Sbjct: 198 KFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
>Os01g0972000 Zinc finger, RING-type domain containing protein
Length = 334
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 179 NNEAIILQGTFGPXXXXXXXXXXXXGVSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKK 238
N I+L+ + P G S L P D LL + + N + PPA K
Sbjct: 55 NPPVIVLRRSASPDDATTFDLLYDDGASSA---LRPLFDRLLLRIPSASDNPN--PPASK 109
Query: 239 EAVEALPTV-----NIQEVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCP 293
AV+++PT+ ++ C+VC E F + EA+EMPC H +H CILPWL LH+SCP
Sbjct: 110 AAVDSMPTILIGACHLAADSHCAVCKEPFHLAAEAREMPCAHIYHHNCILPWLALHNSCP 169
Query: 294 ICRFQLPTE--ESKNPCESAGGIVSVNDDGDDAGT 326
+CR ++PT+ +S N + S ++D GT
Sbjct: 170 VCRHRMPTDDHDSTNAAAAQAAAGSSDEDATTVGT 204
>Os11g0119200 Zinc finger, RING-type domain containing protein
Length = 491
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 209 DYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTV------NIQEVLGCSVCLEDF 262
DY ++LL+ AE + +R G PPA +E LP+V I + + C VC +
Sbjct: 274 DYVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPI 333
Query: 263 EMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPT-----EESKNPCESAGGIVSV 317
AK++PC H +HS CILPW ++CP+CR++LPT E SK + I V
Sbjct: 334 PTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDDAEYERSKQATTNVRDIQVV 393
Query: 318 NDDGDD 323
++ D+
Sbjct: 394 EENSDE 399
>Os05g0495000
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 208 GDYFLGPGLDILLQHLAES-DLNRSGTPPAKKEAVEALPTVNIQEVL-----GCSVCLED 261
G Y+ GL+ L + L +R G PPA A++A+P V I C VC ++
Sbjct: 187 GGYYRA-GLEALFEQLQNQLGSSRQGPPPAPPSAIDAMPVVTISRRHLRAEPRCPVCQDE 245
Query: 262 FEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLP 300
F++G EA+EMPC H +H+ CI+PWL H+SCP+CR LP
Sbjct: 246 FQLGAEAREMPCAHLYHADCIVPWLVHHNSCPVCRHSLP 284
>Os12g0118700 Zinc finger, RING-type domain containing protein
Length = 499
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 209 DYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQEV------LGCSVCLEDF 262
DY ++LL+ AE + +R G PPA +E LP+V I + C VC +
Sbjct: 282 DYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPI 341
Query: 263 EMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEESK 305
AK++PC H +HS CILPWL ++CP+CR++LPT++++
Sbjct: 342 PTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDDAE 384
>Os03g0271600 Zinc finger, RING-type domain containing protein
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 211 FLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQ-EVLGCSVCLEDFEMGTEAK 269
+G G LL + + + PPA K AVE++P+V + C+VC E FE G A+
Sbjct: 91 LMGSGFHRLLDQFSRLEAA-APRPPASKAAVESMPSVTVAGSGAHCAVCQEAFEPGASAR 149
Query: 270 EMPCQHKFHSQCILPWLELHSSCPICRFQL 299
EMPC+H +H CILPWL L +SCP+CR +L
Sbjct: 150 EMPCKHVYHQDCILPWLSLRNSCPVCRREL 179
>Os08g0487500 Zinc finger, RING-type domain containing protein
Length = 271
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 234 PPAKKEAVEALPTVNIQ-----EVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLEL 288
PPA + AVEALP+ + E C+VC + G K +PC H +H +CI+PWL++
Sbjct: 183 PPAARSAVEALPSAVVAAGEDGEGEECAVCRDGVAAGERVKRLPCSHGYHEECIMPWLDV 242
Query: 289 HSSCPICRFQLPTEE 303
+SCP+CRF+LPT++
Sbjct: 243 RNSCPLCRFELPTDD 257
>Os07g0631200 Zinc finger, RING-type domain containing protein
Length = 185
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 231 SGTPPAKKEAVEALPTVNIQE------VLG-CSVCLEDFEMGTEAKEMPCQHKFHSQCIL 283
G PPA K A+ +L V E LG C++CL+ F G KEMPC H+FHS+C+
Sbjct: 58 GGVPPASKAAIASLKEVKAGEDGEGGDSLGDCAICLDAFAAG---KEMPCGHRFHSECLE 114
Query: 284 PWLELHSSCPICRFQLPTEESKNPCESAGG 313
WL +H SCP+CR +LP E + P E G
Sbjct: 115 RWLGVHGSCPVCRRELPAAEQQPPEEQQSG 144
>Os12g0140233 Zinc finger, RING-type domain containing protein
Length = 199
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 232 GTPPAKKEAVEALPTVNIQEVL--GCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELH 289
G PA +A+ L + GC+VCLEDFE G + MPC H FH+ CIL WL L
Sbjct: 123 GAVPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLS 182
Query: 290 SSCPICRFQLPTEE 303
CP+CRF +PT++
Sbjct: 183 HRCPLCRFPMPTQD 196
>Os12g0140700 Zinc finger, RING-type domain containing protein
Length = 197
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 232 GTPPAKKEAVEALPTVNIQEVL--GCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELH 289
G PA +A+ L + GC+VCLEDFE G + MPC H FH+ CIL WL L
Sbjct: 121 GAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLS 180
Query: 290 SSCPICRFQLPTEE 303
CP+CRF +PT++
Sbjct: 181 HRCPLCRFPMPTQD 194
>Os03g0286100
Length = 140
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 204 GVSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQE-------VLGCS 256
G++L DYF GP LD L+Q L + D+ R GT P KKEA E +PTV + +
Sbjct: 52 GMALADYFFGPELDDLMQWLGDGDVGRKGTLPTKKEARETMPTVEVTAGHSASAFATAST 111
Query: 257 VCLEDFEMGTEAKEMPCQHKFHSQCI 282
VC ED+ +G A P +H+FH+ +
Sbjct: 112 VCREDYAVGEHATGTPYRHRFHASAL 137
>Os02g0727700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 66/131 (50%), Gaps = 24/131 (18%)
Query: 210 YFLGPGLDILLQHLAESDLNRSGTPPAKKEA-------VEALPTVNIQEVLG---CSVCL 259
+FL D+L LA PPA K A VE+LPTV + G C+VC
Sbjct: 181 FFLDDADDVLFGQLAAEH-----EPPAAKGARAAAKAAVESLPTVVVDAARGDTQCAVCK 235
Query: 260 EDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPT-----EESKNPCESAGGI 314
+ E G A+ +PC H +H CILPWL + ++CP+CR +LPT E K +AGG
Sbjct: 236 DGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEYENWKARRAAAGG- 294
Query: 315 VSVNDDGDDAG 325
N DGD G
Sbjct: 295 ---NGDGDRYG 302
>Os11g0142800
Length = 231
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 216 LDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQEVLG----CSVCLEDFEMGTEAKEM 271
LD +LQ A+ D N G PA A+ LP + + + G C VCL+ FE G + ++M
Sbjct: 103 LDGILQ--ADDDGNGGGATPASSMAIVNLPEITVGDEKGEAKDCPVCLQGFEEGDKLRKM 160
Query: 272 PC--QHKFHSQCILPWLELHSSCPICRFQLPTEESKN 306
PC H FH QCI WL ++ CP+CRF LP E ++
Sbjct: 161 PCADSHCFHEQCIFSWLLINRHCPLCRFPLPAETEED 197
>Os08g0464400 Zinc finger, RING-type domain containing protein
Length = 211
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 244 LPTVNIQE-VLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTE 302
LPTV + E C++C +D + A+ +PC H +HS+CI+ WLE+ +SCP+CR +LP++
Sbjct: 62 LPTVEVSEPATACAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRSRLPSD 121
Query: 303 ESKN 306
E ++
Sbjct: 122 EPQD 125
>Os11g0142600
Length = 269
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Query: 235 PAKKEAVEALPT-------VNIQEVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLE 287
PA +A+ ALP +E C+VCLE F+ G K+MPC H FH+ CI WL
Sbjct: 184 PASSDAIAALPVPETTVSETETREEEACAVCLEGFKEGDRVKKMPCSHDFHANCISEWLR 243
Query: 288 LHSSCPICRFQLPTE---ESKNPCES 310
+ CP CRF LP E E KNP E+
Sbjct: 244 VSRLCPHCRFALPAERDSEQKNPEEA 269
>Os03g0380100
Length = 179
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 232 GTPPAKKEAVEALPTVNIQEVL---GCSVCLEDFEMGTEA----KEMPCQHKFHSQCILP 284
G PA KEA+EAL V + ++ C++CL + T A KEMPC H+FH C++
Sbjct: 89 GVAPAFKEAIEALRDVVVDQLAPAAECAICLHGQDAATAAAGRWKEMPCGHRFHGVCLVK 148
Query: 285 WLELHSSCPICRFQLP 300
WL +H +CP+CR Q+P
Sbjct: 149 WLRVHGTCPMCRHQMP 164
>Os12g0139100
Length = 228
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 216 LDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQEVLG----CSVCLEDFEMGTEAKEM 271
LD +LQ + D N G PA A+ +LP + + + G C VCL+ FE G + + M
Sbjct: 103 LDGILQ--PDDDGNGGGATPASSMAIVSLPEITVGDEKGEAKDCPVCLQGFEEGDKLRRM 160
Query: 272 PC--QHKFHSQCILPWLELHSSCPICRFQLP 300
PC H FH QCI WL ++ CP+CRF LP
Sbjct: 161 PCADSHCFHEQCIFSWLVINRHCPLCRFPLP 191
>Os01g0844700
Length = 235
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 221 QHLAESDLNRSGTPPAKKEAVEALPTVNIQEV-LGCSVCLEDFEMGTEAKEMPCQHKFHS 279
+ L L R+ A + LPTV +++ C+VCL+D E G A PC H +H
Sbjct: 54 EFLQACALRRAPVAAAVSSTRQQLPTVTVRDAGRTCAVCLDDLEPGGSAVVTPCDHAYHP 113
Query: 280 QCILPWLELHSSCPICR 296
QCI PWLE H +CP+CR
Sbjct: 114 QCIAPWLEAHDTCPLCR 130
>Os09g0434200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 216 LDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQEVL--------GCSVCLEDFEMGTE 267
L+ L+ ++ + PPA KE V LP V + E + C+VC E + +
Sbjct: 193 LEAALEESLQNVMANPKVPPASKEVVANLPVVTVTEEIIARLGKETQCAVCRESLLVDDK 252
Query: 268 AKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEE 303
+E+PC+H FH C+ PWL+ ++SCPICR +L T++
Sbjct: 253 MQELPCKHLFHPPCLKPWLDENNSCPICRHELRTDD 288
>Os02g0191500 Similar to Goliath homolog precursor (RING finger protein 130)
Length = 375
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 236 AKKEAVEALPTVNIQE---VLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSC 292
A + VE+LP + E GC+VC + F G +PC+H FH CI PWL + ++C
Sbjct: 253 ASQLVVESLPEATLSEEEASRGCAVCKDSFASGQIVALLPCKHYFHGDCIWPWLTIRTTC 312
Query: 293 PICRFQLPTEE 303
P+CR Q+ TE+
Sbjct: 313 PVCRHQVRTED 323
>Os09g0344900 Zinc finger, RING-type domain containing protein
Length = 227
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 229 NRSGTPPAKKEAVEALPTVNIQEVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLEL 288
NR G AK + P N +E C++CLE F G + PC H FH +CI PW++
Sbjct: 112 NRGGRNHAKSARSKPAPN-NTEEEKACTICLETFLAGEQVVATPCNHIFHQECITPWVKG 170
Query: 289 HSSCPICRFQL 299
H +CP+CRF L
Sbjct: 171 HGNCPVCRFAL 181
>Os12g0140600 Zinc finger, RING-type domain containing protein
Length = 171
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 236 AKKEAVEALPTVNIQEVL--GCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCP 293
A +A+ L N+ E C+VCLE FE G + MPC H FH +CI WL + CP
Sbjct: 81 ASAKAMVTLHQPNLGETREQDCAVCLEPFEEGNTLRMMPCFHSFHQRCIFSWLRISRICP 140
Query: 294 ICRFQLPTE 302
+CRF LP++
Sbjct: 141 VCRFTLPSQ 149
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,735,495
Number of extensions: 323644
Number of successful extensions: 1455
Number of sequences better than 1.0e-10: 35
Number of HSP's gapped: 1518
Number of HSP's successfully gapped: 36
Length of query: 369
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 267
Effective length of database: 11,709,973
Effective search space: 3126562791
Effective search space used: 3126562791
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)