Os12g0140700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os12g0140700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.86 | 0.501 | 2.96 | 0.217 | 0.0586 | 9.82 | -0.143 | 17.1 | -0.0136 | 17.1 | 1016 | 1540 | -- | -- |
| 119.2 | 0.508 | 2.9 | 0.0844 | 0.0125 | 1.64 | 0.14 | -- | -0.0179 | 10.2 | 1014 | 1208 | -- | -- |
| 113.69 | 0.497 | 2.96 | 0.201 | 0.0538 | 10.3 | -- | 18.1 | -0.0179 | 17.7 | 1016 | 1519 | -- | -- |
| 118.88 | 0.508 | 2.9 | 0.0813 | 0.0486 | 1.7 | -- | -- | -0.0108 | 15.6 | 1014 | 1524 | -- | -- |
| 113.69 | 0.497 | 2.97 | 0.244 | -- | 12.1 | -- | 21.8 | -0.0194 | -- | 1016 | 1498 | -- | -- |
| 128.58 | 0.532 | 2.9 | 0.0136 | 0.0771 | -- | -0.215 | -- | -0.0475 | 15.2 | -- | -- | -- | -- |
| 128.71 | 0.531 | 2.9 | 0.00917 | 0.0763 | -- | -- | -- | -0.0488 | 14.3 | -- | -- | -- | -- |
| 118.99 | 0.508 | 2.9 | 0.0935 | -- | 1.7 | -- | -- | -0.0138 | -- | 1014 | 1528 | -- | -- |
| 119.1 | 0.508 | 2.9 | -- | 0.0461 | 1.64 | -- | -- | -0.023 | 15.4 | 1014 | 1519 | -- | -- |
| 129.06 | 0.531 | 2.91 | 0.00595 | -- | -- | -- | -- | -0.0507 | -- | -- | -- | -- | -- |
| 128.71 | 0.531 | 2.9 | -- | 0.0761 | -- | -- | -- | -0.0499 | 14.3 | -- | -- | -- | -- |
| 119.21 | 0.509 | 2.9 | -- | -- | 1.65 | -- | -- | -0.0232 | -- | 1014 | 1518 | -- | -- |
| 129.06 | 0.53 | 2.91 | -- | -- | -- | -- | -- | -0.0514 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.92 | temperature | 20 | 270 | < th | dose dependent | rect. | 6 | 14 |
| 2 | 111.98 | wind | 5 | 90 | > th | dose dependent | rect. | 23 | 1 |
| 7 | 113.20 | wind | 9 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 8 | 113.35 | wind | 9 | 1440 | > th | dose independent | rect. | 22 | 4 |
| 16 | 113.35 | wind | 9 | 1440 | > th | dose dependent | rect. | 22 | 4 |
| 24 | 113.36 | wind | 9 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 28 | 113.36 | wind | 9 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 32 | 113.38 | wind | 9 | 90 | > th | dose independent | rect. | 22 | 12 |
| 34 | 113.45 | wind | 7 | 90 | > th | dose independent | rect. | 22 | 1 |
| 38 | 113.49 | wind | 9 | 270 | > th | dose independent | rect. | 22 | 4 |
| 46 | 113.49 | wind | 9 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 104 | 113.69 | temperature | 20 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 107 | 113.76 | atmosphere | 1015 | 1440 | > th | dose dependent | sin | 3 | NA |
| 112 | 113.83 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 2 | 19 |
| 115 | 113.85 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 10 | 10 |
| 182 | 114.01 | wind | 9 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 231 | 114.39 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 262 | 114.98 | wind | 9 | 270 | > th | dose independent | rect. | 19 | 15 |
| 278 | 115.10 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 3 | 17 |
| 280 | 115.13 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 10 | 10 |
| 305 | 115.23 | atmosphere | 1015 | 1440 | > th | dose independent | sin | 2 | NA |
| 322 | 115.34 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 23 | 21 |
| 364 | 115.61 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 371 | 115.70 | atmosphere | 1015 | 1440 | < th | dose independent | sin | 3 | NA |
| 372 | 115.71 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 377 | 115.72 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 383 | 115.74 | temperature | 20 | 270 | < th | dose dependent | sin | 23 | NA |
| 393 | 115.82 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 501 | 116.14 | atmosphere | 1015 | 1440 | > th | dose dependent | no | NA | NA |
| 526 | 116.15 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 529 | 116.16 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 566 | 116.30 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 23 | 15 |
| 567 | 116.31 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 751 | 117.45 | humidity | 90 | 30 | > th | dose independent | rect. | 9 | 11 |
| 758 | 117.48 | wind | 7 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 762 | 117.50 | humidity | 90 | 30 | > th | dose independent | rect. | 11 | 9 |
| 769 | 117.53 | temperature | 20 | 30 | < th | dose dependent | rect. | 7 | 14 |
| 781 | 117.57 | wind | 7 | 270 | > th | dose independent | rect. | 19 | 19 |
| 789 | 117.63 | wind | 9 | 270 | > th | dose dependent | sin | 9 | NA |
| 809 | 117.73 | wind | 9 | 270 | < th | dose independent | sin | 9 | NA |
| 822 | 117.80 | humidity | 90 | 30 | > th | dose dependent | rect. | 9 | 11 |
| 827 | 117.82 | humidity | 90 | 30 | > th | dose dependent | rect. | 11 | 9 |
| 835 | 117.86 | wind | 9 | 270 | > th | dose independent | sin | 9 | NA |
| 883 | 118.03 | atmosphere | 1015 | 1440 | > th | dose independent | no | NA | NA |
| 917 | 118.05 | temperature | 20 | 90 | < th | dose dependent | rect. | 11 | 9 |
| 931 | 118.09 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 956 | 118.17 | temperature | 20 | 10 | < th | dose dependent | rect. | 11 | 10 |
| 998 | 118.35 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 7 | 19 |