BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0140700 Os12g0140700|AK108475
(197 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0140700 Zinc finger, RING-type domain containing protein 410 e-115
Os12g0140233 Zinc finger, RING-type domain containing protein 396 e-111
Os12g0140600 Zinc finger, RING-type domain containing protein 93 1e-19
Os11g0142800 93 1e-19
Os12g0139100 92 3e-19
Os11g0142600 92 4e-19
Os12g0143750 Zinc finger, RING-type domain containing protein 89 2e-18
Os12g0139000 86 1e-17
Os10g0487400 Zinc finger, RING-type domain containing protein 84 6e-17
Os01g0276600 Zinc finger, RING-type domain containing protein 80 8e-16
Os11g0138275 77 1e-14
Os11g0138000 77 1e-14
Os12g0139201 76 2e-14
Os03g0812200 Zinc finger, RING-type domain containing protein 76 2e-14
Os06g0101300 Zinc finger, RING-type domain containing protein 75 3e-14
Os03g0324900 Zinc finger, RING-type domain containing protein 74 5e-14
Os08g0487500 Zinc finger, RING-type domain containing protein 73 1e-13
Os05g0488800 Zinc finger, RING-type domain containing protein 72 2e-13
Os12g0134800 71 5e-13
Os02g0767600 70 1e-12
Os12g0148000 69 2e-12
Os05g0110000 Zinc finger, RING-type domain containing protein 69 3e-12
Os02g0727700 Zinc finger, RING-type domain containing protein 68 5e-12
Os07g0631200 Zinc finger, RING-type domain containing protein 67 6e-12
Os11g0144800 67 7e-12
Os06g0633500 Zinc finger, RING-type domain containing protein 66 2e-11
Os12g0148100 65 3e-11
Os02g0191500 Similar to Goliath homolog precursor (RING fin... 64 5e-11
Os03g0351800 Zinc finger, RING-type domain containing protein 64 9e-11
Os01g0802000 Zinc finger, RING-type domain containing protein 64 1e-10
>Os12g0140700 Zinc finger, RING-type domain containing protein
Length = 197
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MEVDASAVARALPRDFPPIENLSFEGFPRYTFKIGNRIHCTNLMYRPGSRTLLTQEEAHE 60
MEVDASAVARALPRDFPPIENLSFEGFPRYTFKIGNRIHCTNLMYRPGSRTLLTQEEAHE
Sbjct: 1 MEVDASAVARALPRDFPPIENLSFEGFPRYTFKIGNRIHCTNLMYRPGSRTLLTQEEAHE 60
Query: 61 IIREGLRSDIRRGRIQLNADFLQQLVDQVRDHILQRQRRGTATAMDGVVEVEDAYRNGGF 120
IIREGLRSDIRRGRIQLNADFLQQLVDQVRDHILQRQRRGTATAMDGVVEVEDAYRNGGF
Sbjct: 61 IIREGLRSDIRRGRIQLNADFLQQLVDQVRDHILQRQRRGTATAMDGVVEVEDAYRNGGF 120
Query: 121 GAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLS 180
GAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLS
Sbjct: 121 GAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLS 180
Query: 181 HRCPLCRFPMPTQDQSY 197
HRCPLCRFPMPTQDQSY
Sbjct: 181 HRCPLCRFPMPTQDQSY 197
>Os12g0140233 Zinc finger, RING-type domain containing protein
Length = 199
Score = 396 bits (1017), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/199 (96%), Positives = 195/199 (97%), Gaps = 2/199 (1%)
Query: 1 MEVDASAVARALPRDFPPIENLSFEGFPRYTFKIGNRIHCTNLMYRPGSRTLLTQEEAHE 60
MEVDASAVARALPRDFPPIENLSFEG PRYTFKIGNRIHCTNLMYRPGSRTLLTQEEAHE
Sbjct: 1 MEVDASAVARALPRDFPPIENLSFEGIPRYTFKIGNRIHCTNLMYRPGSRTLLTQEEAHE 60
Query: 61 IIREGLRSDIRRGRIQLNADFLQQLVDQVRDHILQRQRRGTATA--MDGVVEVEDAYRNG 118
IIRE LRSDIRRGRI+L+ADFLQQLVDQVRDHILQRQRRGTATA MDGVVEVEDAYRNG
Sbjct: 61 IIRERLRSDIRRGRIELDADFLQQLVDQVRDHILQRQRRGTATAIAMDGVVEVEDAYRNG 120
Query: 119 GFGAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLR 178
GFGA+PASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLR
Sbjct: 121 GFGAVPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLR 180
Query: 179 LSHRCPLCRFPMPTQDQSY 197
LSHRCPLCRFPMPTQDQSY
Sbjct: 181 LSHRCPLCRFPMPTQDQSY 199
>Os12g0140600 Zinc finger, RING-type domain containing protein
Length = 171
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 86 VDQVRDHILQRQRRGTATAMDGVVEVEDAYRNGGFG-AIPASSKAMAELQEAMASDARER 144
V +DH+L+ + R A ++ V E + +G FG AS+KAM L + + RE+
Sbjct: 42 VRMSQDHLLRHEARRRAATLE-VFEDRENSHDGAFGCGDRASAKAMVTLHQPNLGETREQ 100
Query: 145 GCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCRFPMPTQ 193
CAVCLE FE G L MPC H FH CI WLR+S CP+CRF +P+Q
Sbjct: 101 DCAVCLEPFEEGNTLRMMPCFHSFHQRCIFSWLRISRICPVCRFTLPSQ 149
>Os11g0142800
Length = 231
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 6/93 (6%)
Query: 105 MDGVVEVEDAYRNGGFGAIPASSKAMAELQEAMASDAR--ERGCAVCLEDFEAGEKLTRM 162
+DG+++ +D NGG GA PASS A+ L E D + + C VCL+ FE G+KL +M
Sbjct: 103 LDGILQADDD-GNGG-GATPASSMAIVNLPEITVGDEKGEAKDCPVCLQGFEEGDKLRKM 160
Query: 163 PC--SHCFHATCILDWLRLSHRCPLCRFPMPTQ 193
PC SHCFH CI WL ++ CPLCRFP+P +
Sbjct: 161 PCADSHCFHEQCIFSWLLINRHCPLCRFPLPAE 193
>Os12g0139100
Length = 228
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 59/91 (64%), Gaps = 6/91 (6%)
Query: 105 MDGVVEVEDAYRNGGFGAIPASSKAMAELQEAMASDAR--ERGCAVCLEDFEAGEKLTRM 162
+DG+++ +D NGG GA PASS A+ L E D + + C VCL+ FE G+KL RM
Sbjct: 103 LDGILQPDDD-GNGG-GATPASSMAIVSLPEITVGDEKGEAKDCPVCLQGFEEGDKLRRM 160
Query: 163 PC--SHCFHATCILDWLRLSHRCPLCRFPMP 191
PC SHCFH CI WL ++ CPLCRFP+P
Sbjct: 161 PCADSHCFHEQCIFSWLVINRHCPLCRFPLP 191
>Os11g0142600
Length = 269
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 108 VVEVEDAYRNGGFGAIPASSKAMAELQ--EAMASDAR---ERGCAVCLEDFEAGEKLTRM 162
+ E +D Y + GF A+PASS A+A L E S+ E CAVCLE F+ G+++ +M
Sbjct: 168 IEEDDDTYSDDGFCAVPASSDAIAALPVPETTVSETETREEEACAVCLEGFKEGDRVKKM 227
Query: 163 PCSHCFHATCILDWLRLSHRCPLCRFPMPTQDQS 196
PCSH FHA CI +WLR+S CP CRF +P + S
Sbjct: 228 PCSHDFHANCISEWLRVSRLCPHCRFALPAERDS 261
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
Query: 112 EDAYRNGGFGAIPASSKAMAELQE-------AMASDARERGCAVCLEDFEAGEKLTRMPC 164
++AY NGGFGA+PA S+A+ L E +ARE+ C VCLE FE GEKL +MPC
Sbjct: 75 DEAYSNGGFGAVPALSEAIVSLPEMAVGCGCGGGGEAREKECGVCLEGFEEGEKLRKMPC 134
Query: 165 SHCFHATCILDWLR 178
H FH +C+ WL+
Sbjct: 135 EHYFHESCVFKWLQ 148
>Os12g0143750 Zinc finger, RING-type domain containing protein
Length = 131
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 49/70 (70%)
Query: 127 SKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLC 186
SKA+ L+E A+ ARE CAVCL+DF A EKL MPCSH FH CI DWLRLS CPLC
Sbjct: 51 SKAIQGLREVTAAGAREEECAVCLQDFVAEEKLRMMPCSHTFHQRCIFDWLRLSCICPLC 110
Query: 187 RFPMPTQDQS 196
R +PTQ S
Sbjct: 111 RRALPTQHYS 120
>Os12g0139000
Length = 286
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%)
Query: 112 EDAYRNGGFGAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHAT 171
++AY NGGFGA+PA S+A+ + E +ARE+ C VCLE FE G+KL +MPC H FH +
Sbjct: 99 DEAYSNGGFGAVPALSEAIVSMPELSVGEAREKQCGVCLEGFEEGDKLRKMPCEHYFHES 158
Query: 172 CILDWLRLSHRCP 184
C+ WL+ P
Sbjct: 159 CVFKWLQGPSYVP 171
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 108 VVEVEDAYRNGGFGAIPASSKAMAELQEAMASDAR---ERGCAVCLEDFEAGEKLTRMPC 164
+ E +DAY GF A+PASS A+A L E S+ E CAVCLE F+ G+K+ +MPC
Sbjct: 185 IEEDDDAYSEDGFCAVPASSDAIAALPETTVSETETREEEACAVCLEGFKEGDKVKKMPC 244
Query: 165 SHCFHATCILDW-LRLSHRCP 184
SH FH++CI D + LS P
Sbjct: 245 SHDFHSSCISDSEMLLSQGSP 265
>Os10g0487400 Zinc finger, RING-type domain containing protein
Length = 304
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 120 FGAIPASSKAMAELQEAMASDARERG-----CAVCLEDFEAGEKLTRMPCSHCFHATCIL 174
+G PA+ A++ L + + +DA CAVC EDF GE +MPC H +HA CI+
Sbjct: 139 YGTPPAAKSALSTLPDVVVTDAMVAAADGAECAVCKEDFSPGEGAKQMPCKHIYHADCIM 198
Query: 175 DWLRLSHRCPLCRFPMPTQDQSY 197
WL L + CP+CRF +PT D Y
Sbjct: 199 PWLDLHNSCPICRFELPTDDPDY 221
>Os01g0276600 Zinc finger, RING-type domain containing protein
Length = 329
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 113 DAYRNGGFGAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATC 172
DA R G A + ++M ++ A D + CAVCLED+ AGE+ T MPC H FHA C
Sbjct: 181 DAGRQGTLPAKKEAVESMPTVEVAAGGDC-DSACAVCLEDYAAGERATEMPCRHRFHAKC 239
Query: 173 ILDWLRLSHRCPLCRFPMPT 192
I+ WL++ CP+CRF +PT
Sbjct: 240 IVPWLKMHSSCPVCRFQLPT 259
>Os11g0138275
Length = 218
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 93 ILQRQRRGTATAMDGVVEVEDAYRNGGFGAIPASSKAMAELQEAMASDARERGCAVCLED 152
++ R+RR A DG ++ + A+ S + L A DAR+ CAVCL D
Sbjct: 118 VIGRRRR----AADGDAPMQPPSKYARVHAV--SRDVLLGLALTKACDARQEECAVCLSD 171
Query: 153 FEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCRFPMPTQDQ 195
FE ++L MPC+H FH C+ WLR S CPLCR+ +P Q Q
Sbjct: 172 FEEKDRLRTMPCNHSFHENCLFRWLRDSCLCPLCRYALPKQQQ 214
>Os11g0138000
Length = 218
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 93 ILQRQRRGTATAMDGVVEVEDAYRNGGFGAIPASSKAMAELQEAMASDARERGCAVCLED 152
++ R+RR A DG ++ + A+ S + L A DAR+ CAVCL D
Sbjct: 118 VIGRRRR----AADGDAPMQPPSKYARVHAV--SRDVLLGLALTKACDARQEECAVCLSD 171
Query: 153 FEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCRFPMPTQDQ 195
FE ++L MPC+H FH C+ WLR S CPLCR+ +P Q Q
Sbjct: 172 FEEKDRLRTMPCNHSFHENCLFRWLRDSCLCPLCRYALPKQQQ 214
>Os12g0139201
Length = 182
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 106 DGVVEVEDAYRNGGFGAIPASSKAMAELQEAMASDARERGCAVCLEDF--EAGEKLTRMP 163
+ + Y NG FG++PA S+A+A L+E A +A+E+ C+VCLE F E+ + + +MP
Sbjct: 41 NAAAAAPEGYSNGRFGSVPACSEAIAALEETSAGEAKEKDCSVCLEAFEEESDKPMRKMP 100
Query: 164 CSHCFHATCILDWLR 178
C H FH CI +WL+
Sbjct: 101 CCHAFHENCIFEWLQ 115
>Os03g0812200 Zinc finger, RING-type domain containing protein
Length = 369
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 121 GAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLS 180
G PA +A+ L + GC+VCLEDFE G + MPC H FH+ CIL WL L
Sbjct: 232 GTPPAKKEAVEALPTVNIQEVL--GCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELH 289
Query: 181 HRCPLCRFPMPTQD 194
CP+CRF +PT++
Sbjct: 290 SSCPICRFQLPTEE 303
>Os06g0101300 Zinc finger, RING-type domain containing protein
Length = 338
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 120 FGAIPASSKAMAELQEA------MASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCI 173
+G PA+ A+A L + MA+D + CAVC++DF G ++PC H FH CI
Sbjct: 171 YGTPPAAKSAVAALPDVAVSADMMAADGGAQ-CAVCMDDFHLGAAAKQLPCKHVFHKDCI 229
Query: 174 LDWLRLSHRCPLCRFPMPTQDQSY 197
L WL L CP+CRF +PT D +
Sbjct: 230 LPWLDLHSSCPVCRFELPTDDPHH 253
>Os03g0324900 Zinc finger, RING-type domain containing protein
Length = 320
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 121 GAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLS 180
G PA +A+A L DA C VCL++FEAG + MPC H FH CIL WL
Sbjct: 187 GTPPARKEAVAALPTVRVHDAAGATCPVCLDEFEAGGEAREMPCKHRFHDGCILPWLEAH 246
Query: 181 HRCPLCRFPMPTQDQ 195
CP+CR+ +PT D+
Sbjct: 247 SSCPVCRYQLPTDDE 261
>Os08g0487500 Zinc finger, RING-type domain containing protein
Length = 271
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 124 PASSKAMAELQEAMAS---DARERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLS 180
PA+ A+ L A+ + D CAVC + AGE++ R+PCSH +H CI+ WL +
Sbjct: 184 PAARSAVEALPSAVVAAGEDGEGEECAVCRDGVAAGERVKRLPCSHGYHEECIMPWLDVR 243
Query: 181 HRCPLCRFPMPTQDQSY 197
+ CPLCRF +PT D Y
Sbjct: 244 NSCPLCRFELPTDDPQY 260
>Os05g0488800 Zinc finger, RING-type domain containing protein
Length = 323
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 113 DAYRNGGFGAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHCFHATC 172
D RNG PA +A+ L + C+VCL+D E G + +MPC H FH++C
Sbjct: 171 DPSRNG---TPPAKKEAVEALPTVKIEEVV--SCSVCLDDLEVGSQAKQMPCEHKFHSSC 225
Query: 173 ILDWLRLSHRCPLCRFPMPTQD 194
IL WL L CP+CRF +P+++
Sbjct: 226 ILPWLELHSSCPVCRFELPSEE 247
>Os12g0134800
Length = 193
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 88 QVRDHILQRQRRGTATAMDGVVEVEDAYRNGGFGAIPASSKAMAELQEAMASDARERGCA 147
+RD +LQ RRG D V A G S + L A DAR+ CA
Sbjct: 84 SIRD-MLQEFRRGVYQGEDDV-----AAPPTGMPRCKMSRDVLLGLALTKACDARQEECA 137
Query: 148 VCLEDFEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCRFPMP 191
VCL DFE + L MPC+H FH C+ WL S CPLCR+ +P
Sbjct: 138 VCLRDFEEKDMLRTMPCNHSFHEICLFRWLSESCLCPLCRYALP 181
>Os02g0767600
Length = 335
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 111 VEDAYRNGGFGAIPASSKAM-----AELQEAMASDARERGCAVCLEDFEAGEKLTRMPCS 165
+E+ +N G PA S A+ ++ A SD + C VC EDFE GE +MPC
Sbjct: 161 IEELTQNDRPGPAPAPSSAIDSLPTVQITGAHLSDGSQ--CPVCKEDFELGEAARQMPCK 218
Query: 166 HCFHATCILDWLRLSHRCPLCRF 188
H +H+ CI+ WLRL + CP+CR+
Sbjct: 219 HVYHSDCIVPWLRLHNSCPVCRY 241
>Os12g0148000
Length = 277
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 17/100 (17%)
Query: 113 DAYRNGGFGAIPASSKAMAELQEAM-------------ASDARER--GCAVCLEDFEAGE 157
D GGF +PAS+ A+A L++ + +A++ GC +C+E+F AG+
Sbjct: 169 DLDDGGGFRGVPASAAAVAGLEKQVFHQFDHHGGDDDDDDEAKDSAAGCVICMEEFVAGD 228
Query: 158 KLTRMPCS--HCFHATCILDWLRLSHRCPLCRFPMPTQDQ 195
++ +PC+ H FH CI +WL S+ CPLCR +P ++Q
Sbjct: 229 EVCAIPCAGNHSFHHHCITEWLGRSNVCPLCRHALPVEEQ 268
>Os05g0110000 Zinc finger, RING-type domain containing protein
Length = 333
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 124 PASSKAMAELQEAMASDARERG----CAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRL 179
P +SKA E + A G CAVC E FE G++ MPCSH +H CIL WL L
Sbjct: 117 PPASKASVESMPTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCILPWLAL 176
Query: 180 SHRCPLCRFPMPT 192
+ CP+CR MPT
Sbjct: 177 RNSCPVCRHEMPT 189
>Os02g0727700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 146 CAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCRFPMPTQDQSY 197
CAVC + EAGE+ R+PC+H +H CIL WL + + CPLCR +PT D Y
Sbjct: 231 CAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLCRHELPTDDPEY 282
>Os07g0631200 Zinc finger, RING-type domain containing protein
Length = 185
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 113 DAYRNG-GFGAIPASSKAMAELQEAMASDARERG-----CAVCLEDFEAGEKLTRMPCSH 166
D + G G G PAS A+A L+E A + E G CA+CL+ F AG++ MPC H
Sbjct: 50 DLFSGGLGGGVPPASKAAIASLKEVKAGEDGEGGDSLGDCAICLDAFAAGKE---MPCGH 106
Query: 167 CFHATCILDWLRLSHRCPLCRFPMPTQDQ 195
FH+ C+ WL + CP+CR +P +Q
Sbjct: 107 RFHSECLERWLGVHGSCPVCRRELPAAEQ 135
>Os11g0144800
Length = 153
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 92 HILQRQRRGTATAMDGVVEVEDAYRNGGFGAIPASSKAMAELQEAMASDARERGCAVCLE 151
H RQRR + V E D R I + L + RE CAVCL+
Sbjct: 27 HREMRQRRWLRDYLASVSEEMDRRRLQARAGI--DDHRLESLHRPRLGETREEACAVCLQ 84
Query: 152 DF-EAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCRFPMPTQD 194
DF E E+L MPCSH FH CI WL + CP+CR M + +
Sbjct: 85 DFGEKDEELRMMPCSHSFHQRCIFGWLAIRDNCPVCRSAMSSYN 128
>Os06g0633500 Zinc finger, RING-type domain containing protein
Length = 124
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 144 RGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLSHRCPLCRFPMPTQDQSY 197
RGCAVC + GE T++PC+H +H CI WL + + CP+CR+ +PT D Y
Sbjct: 48 RGCAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCRYELPTDDPEY 101
>Os12g0148100
Length = 242
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 17/100 (17%)
Query: 113 DAYRNGGFGAIPASSKAMAELQEAM-------------ASDARER--GCAVCLEDFEAGE 157
D GGF +PAS+ A+A L++ + +A++ GC +C+E+F AG+
Sbjct: 137 DLDDGGGFRGVPASAAAVAGLEKQVFHQFDHHGGDDDDDDEAKDSAAGCVICMEEFVAGD 196
Query: 158 KLTRMPCS--HCFHATCILDWLRLSHRCPLCRFPMPTQDQ 195
++ +PC+ H FH CI +WL S+ CPL R +P ++Q
Sbjct: 197 EVCAIPCAGNHSFHHHCITEWLGCSNVCPLGRHALPVEEQ 236
>Os02g0191500 Similar to Goliath homolog precursor (RING finger protein 130)
Length = 375
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 125 ASSKAMAELQEAMASDAR-ERGCAVCLEDFEAGEKLTRMPCSHCFHATCILDWLRLSHRC 183
AS + L EA S+ RGCAVC + F +G+ + +PC H FH CI WL + C
Sbjct: 253 ASQLVVESLPEATLSEEEASRGCAVCKDSFASGQIVALLPCKHYFHGDCIWPWLTIRTTC 312
Query: 184 PLCRFPMPTQDQSY 197
P+CR + T+D Y
Sbjct: 313 PVCRHQVRTEDDDY 326
>Os03g0351800 Zinc finger, RING-type domain containing protein
Length = 283
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 23/156 (14%)
Query: 43 LMYRPGSRTLLTQEEAHEIIREGLRS-DIRRGRIQLNAD-FLQQLVDQVRDHILQRQRRG 100
L++R L+++ ++ G R +RR I AD F+ +D + + + Q RRG
Sbjct: 103 LLFRGQLPGHLSEDNGFDVFINGRRGVGMRRANI---ADYFVGPGLDDLIEQLTQNDRRG 159
Query: 101 TATAMDGVVEVEDAYRNGGFGAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLT 160
A ++ A+P + Q ++ D+ C VC + FE G +
Sbjct: 160 PPPATQSSID-----------AMPT----VKITQRHLSGDSH---CPVCKDKFELGSEAR 201
Query: 161 RMPCSHCFHATCILDWLRLSHRCPLCRFPMPTQDQS 196
MPC H +H+ CI+ WL + CP+CR+ +P Q +
Sbjct: 202 EMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQSST 237
>Os01g0802000 Zinc finger, RING-type domain containing protein
Length = 329
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 50 RTLLTQEEAHEIIREGLRSDIRRGRIQ--LNADFLQQLVDQVRDHILQRQRRGTATAMDG 107
R + EEA ++R+G R R L L+ L +Q+ +L R+G A
Sbjct: 115 RVSSSSEEADILLRQGRRIGADRPNFSRFLVGPSLEALFEQL---LLHNNRQGPPPAPQS 171
Query: 108 VVEVEDAYRNGGFGAIPASSKAMAELQEAMASDARERGCAVCLEDFEAGEKLTRMPCSHC 167
++ ++P + L++ + C VC + FE G + MPC H
Sbjct: 172 AID-----------SMPVVKINLRHLRD-------DPHCPVCTDKFEVGTEAREMPCKHL 213
Query: 168 FHATCILDWLRLSHRCPLCRFPMP 191
+HA CI+ WL + CP+CR P+P
Sbjct: 214 YHAECIIPWLVQHNSCPVCRHPLP 237
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,973,423
Number of extensions: 281312
Number of successful extensions: 1609
Number of sequences better than 1.0e-10: 37
Number of HSP's gapped: 1694
Number of HSP's successfully gapped: 39
Length of query: 197
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 101
Effective length of database: 12,023,257
Effective search space: 1214348957
Effective search space used: 1214348957
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 153 (63.5 bits)