Os02g0191500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Goliath homolog precursor (RING finger protein 130).
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Os02g0191500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Goliath homolog precursor (RING finger protein 130).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.1 | 0.358 | 8.27 | 0.692 | 0.997 | 0.585 | -0.918 | 0.895 | 0.565 | 1.42 | 70 | 1440 | -- | -- |
| 58.83 | 0.357 | 8.25 | 0.836 | 1.19 | 0.732 | -0.954 | -- | 0.612 | 1.09 | 70 | 1122 | -- | -- |
| 59.8 | 0.36 | 8.27 | 0.668 | 1.13 | 0.576 | -- | 1.43 | 0.566 | 1.17 | 70 | 1175 | -- | -- |
| 62.43 | 0.368 | 8.25 | 0.87 | 1.19 | 0.735 | -- | -- | 0.609 | 1.05 | 70 | 1127 | -- | -- |
| 100.81 | 0.47 | 8.26 | 0.805 | -- | 0.645 | -- | -0.546 | 0.508 | -- | 70 | 6119 | -- | -- |
| 75.68 | 0.408 | 8.27 | 0.685 | 0.977 | -- | -1.05 | -- | 0.516 | 1.37 | -- | -- | -- | -- |
| 80.2 | 0.419 | 8.27 | 0.721 | 0.978 | -- | -- | -- | 0.521 | 1.38 | -- | -- | -- | -- |
| 92.7 | 0.45 | 8.25 | 0.816 | -- | 0.66 | -- | -- | 0.561 | -- | 75 | 1704 | -- | -- |
| 81.91 | 0.422 | 8.27 | -- | 1.12 | 0.765 | -- | -- | 0.514 | 0.745 | 72 | 2289 | -- | -- |
| 139.02 | 0.551 | 8.26 | 0.759 | -- | -- | -- | -- | 0.542 | -- | -- | -- | -- | -- |
| 93.9 | 0.453 | 8.29 | -- | 0.99 | -- | -- | -- | 0.441 | 1.41 | -- | -- | -- | -- |
| 109.8 | 0.49 | 8.28 | -- | -- | 0.645 | -- | -- | 0.459 | -- | 75.33 | 3155 | -- | -- |
| 154.23 | 0.58 | 8.28 | -- | -- | -- | -- | -- | 0.458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.91 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 2 | 53.96 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 3 | 54.09 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 5 | 54.10 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 6 | 54.10 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 7 | 54.12 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 12 | 54.16 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 20 | 54.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 22 | 54.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 26 | 54.40 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 27 | 54.41 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 31 | 54.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 32 | 54.47 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 36 | 54.51 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 41 | 54.57 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 44 | 54.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 45 | 54.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 5 |
| 54 | 54.66 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 63 | 54.71 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 95 | 54.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 112 | 55.07 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 121 | 55.12 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 145 | 55.22 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 147 | 55.23 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 163 | 55.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 171 | 55.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 173 | 55.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 175 | 55.33 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 236 | 55.54 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 278 | 55.65 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 287 | 55.67 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 314 | 55.75 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 327 | 55.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 335 | 55.80 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 399 | 55.93 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 420 | 55.97 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 446 | 56.01 | humidity | 80.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 474 | 56.08 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 477 | 56.09 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 548 | 56.22 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 551 | 56.24 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 577 | 56.27 | humidity | 60.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 613 | 56.33 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 614 | 56.33 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 659 | 56.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 661 | 56.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 715 | 56.50 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 729 | 56.52 | humidity | 80.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 783 | 56.61 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 791 | 56.62 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 833 | 56.69 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 856 | 56.72 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 931 | 56.82 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 970 | 56.86 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 23 | 15 |