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Os12g0118700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, RING-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.96 (0.0157) R2 : 0.786
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.67 (0.041) R2dC : 0.784 R2C : 0.775
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.139 (0.033) R2dN8 : 0.0107 R2N8 : 0.00174
σ : 0.296
deviance : 40.02
__
_____
C
peak time of C : 5.32
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.28 0.271 9.95 0.338 1.63 -0.465 -0.548 -0.103 -0.106 5.88 3.601 10 -- --
33.31 0.269 9.95 0.334 1.63 -0.465 -0.549 -- -0.106 5.88 3.597 9 -- --
34.02 0.272 9.94 0.333 1.63 -0.464 -- -0.105 -0.104 5.88 3.66 9 -- --
34.04 0.272 9.94 0.33 1.63 -0.461 -- -- -0.104 5.88 3.76 9 -- --
84.29 0.428 9.92 0.591 -- -1.56 -- 1.72 0.132 -- -86.95 634 -- --
36.54 0.283 9.95 0.328 1.67 -- -0.516 -- -0.105 5.34 -- -- -- --
37.2 0.286 9.95 0.327 1.67 -- -- -- -0.102 5.33 -- -- -- --
84.38 0.428 9.94 0.454 -- -1.67 -- -- 0.0826 -- -346.1 624 -- --
36.82 0.283 9.95 -- 1.62 -0.453 -- -- -0.123 5.84 4.362 38 -- --
182.24 0.631 9.97 0.384 -- -- -- -- -0.0609 -- -- -- -- --
40.02 0.296 9.96 -- 1.67 -- -- -- -0.139 5.32 -- -- -- --
89.81 0.441 9.95 -- -- -1.65 -- -- 0.0311 -- -446.5 624 -- --
186.13 0.637 9.98 -- -- -- -- -- -0.104 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.44 temperature 10.0 270 > th dose dependent rect. 20 5
2 29.55 temperature 10.0 90 > th dose dependent rect. 22 5
14 29.95 temperature 20.0 90 > th dose independent rect. 22 5
16 30.08 humidity 50.0 270 > th dose independent rect. 7 18
17 30.11 temperature 15.0 270 > th dose dependent rect. 22 2
18 30.12 wind 3.0 30 < th dose independent rect. 3 6
20 30.15 radiation 40.0 90 < th dose dependent rect. 3 8
32 30.25 radiation 40.0 90 < th dose dependent rect. 3 6
34 30.26 wind 3.0 30 < th dose independent rect. 3 8
35 30.26 humidity 50.0 270 > th dose independent rect. 5 22
39 30.32 radiation 20.0 90 < th dose independent rect. 3 6
41 30.35 temperature 20.0 270 > th dose independent rect. 22 2
42 30.35 wind 5.0 270 < th dose independent rect. 1 6
46 30.41 radiation 40.0 10 < th dose independent rect. 3 19
50 30.46 wind 5.0 270 < th dose independent rect. 3 2
52 30.47 precipitation 0.1 270 < th dose independent rect. 3 2
54 30.47 precipitation 0.1 270 < th dose dependent rect. 3 2
59 30.49 radiation 40.0 10 < th dose dependent rect. 3 8
60 30.50 wind 5.0 90 < th dose independent rect. 3 4
61 30.51 radiation 30.0 10 < th dose independent rect. 3 8
63 30.52 humidity 50.0 90 > th dose dependent rect. 3 8
66 30.54 precipitation 0.1 270 < th dose independent rect. 1 6
67 30.54 wind 9.0 30 < th dose dependent rect. 3 6
68 30.54 precipitation 0.1 270 < th dose dependent rect. 1 6
80 30.57 radiation 30.0 270 < th dose dependent rect. 1 8
84 30.58 radiation 40.0 30 < th dose dependent rect. 3 19
91 30.61 precipitation 0.1 90 < th dose independent rect. 3 4
94 30.61 precipitation 0.1 90 < th dose dependent rect. 3 4
103 30.64 radiation 20.0 270 < th dose independent rect. 1 6
105 30.64 precipitation 0.1 90 < th dose independent rect. 3 18
107 30.64 precipitation 0.1 90 < th dose dependent rect. 3 18
110 30.65 humidity 70.0 270 > th dose independent rect. 1 6
114 30.66 radiation 1.0 270 < th dose independent rect. 3 2
117 30.66 temperature 10.0 270 > th dose independent rect. 1 6
119 30.66 temperature 30.0 270 < th dose independent rect. 1 6
120 30.66 humidity 50.0 270 > th dose independent rect. 1 6
122 30.66 atmosphere 995.0 270 > th dose independent rect. 1 6
123 30.66 atmosphere 1015.0 270 < th dose independent rect. 1 6
126 30.66 temperature 10.0 270 > th dose independent rect. 7 18
127 30.66 radiation 10.0 270 < th dose dependent rect. 3 2
132 30.66 wind 7.0 30 < th dose dependent rect. 3 8
134 30.67 temperature 10.0 270 > th dose independent rect. 3 2
136 30.67 temperature 30.0 270 < th dose independent rect. 3 2
137 30.67 humidity 50.0 270 > th dose independent rect. 3 2
140 30.67 atmosphere 995.0 270 > th dose independent rect. 3 2
141 30.67 atmosphere 1010.0 270 < th dose independent rect. 3 2
148 30.67 temperature 10.0 270 > th dose independent rect. 5 22
149 30.67 atmosphere 1015.0 90 < th dose dependent rect. 3 4
152 30.69 atmosphere 1015.0 270 < th dose dependent rect. 3 2
157 30.70 precipitation 0.1 10 < th dose independent rect. 3 6
161 30.70 precipitation 0.1 10 < th dose dependent rect. 3 6
168 30.72 wind 9.0 270 < th dose dependent rect. 1 6
172 30.75 wind 9.0 270 < th dose dependent rect. 3 2
174 30.75 radiation 10.0 270 < th dose dependent rect. 1 11
179 30.76 temperature 10.0 90 > th dose independent rect. 3 4
181 30.76 temperature 30.0 90 < th dose independent rect. 3 4
182 30.76 humidity 50.0 90 > th dose independent rect. 3 4
184 30.76 atmosphere 995.0 90 > th dose independent rect. 3 4
185 30.76 atmosphere 1015.0 90 < th dose independent rect. 3 4
188 30.76 humidity 80.0 90 > th dose independent rect. 3 6
190 30.76 temperature 10.0 90 > th dose independent rect. 7 20
198 30.77 precipitation 0.1 270 < th dose independent rect. 1 19
201 30.77 precipitation 0.1 270 < th dose dependent rect. 1 19
236 30.82 precipitation 0.1 270 < th dose independent rect. 7 18
238 30.82 precipitation 0.1 270 < th dose dependent rect. 7 18
242 30.83 radiation 20.0 30 < th dose independent rect. 3 19
257 30.86 temperature 10.0 270 > th dose dependent rect. 3 2
258 30.86 atmosphere 1015.0 270 < th dose dependent rect. 1 5
276 30.87 wind 1.0 270 > th dose independent rect. 1 5
278 30.87 wind 9.0 90 < th dose independent rect. 7 20
285 30.87 humidity 50.0 270 > th dose dependent rect. 3 2
292 30.88 atmosphere 1000.0 90 > th dose independent rect. 21 6
296 30.88 humidity 50.0 90 > th dose dependent rect. 3 6
299 30.89 humidity 80.0 90 > th dose independent rect. 21 6
300 30.89 wind 9.0 270 < th dose independent rect. 7 18
301 30.89 wind 9.0 270 < th dose independent rect. 1 19
306 30.89 humidity 60.0 90 > th dose dependent rect. 3 10
307 30.89 radiation 30.0 90 < th dose dependent rect. 3 10
311 30.90 humidity 80.0 90 > th dose independent rect. 3 8
314 30.91 humidity 80.0 10 > th dose independent rect. 22 5
317 30.91 temperature 10.0 30 > th dose independent rect. 3 6
319 30.91 temperature 30.0 30 < th dose independent rect. 3 6
320 30.91 humidity 50.0 30 > th dose independent rect. 3 6
322 30.91 atmosphere 995.0 30 > th dose independent rect. 3 6
323 30.91 atmosphere 1015.0 30 < th dose independent rect. 3 6
325 30.91 temperature 10.0 30 > th dose independent rect. 9 18
328 30.92 wind 1.0 270 > th dose independent rect. 3 2
331 30.92 precipitation 0.1 270 < th dose independent rect. 15 15
335 30.92 precipitation 0.1 270 < th dose dependent rect. 15 15
346 30.93 precipitation 0.1 90 < th dose independent rect. 21 6
352 30.93 precipitation 0.1 90 < th dose dependent rect. 21 6
374 30.94 wind 9.0 90 < th dose independent rect. 3 18
377 30.95 wind 9.0 90 < th dose independent rect. 21 6
378 30.95 temperature 10.0 90 > th dose independent rect. 21 6
379 30.95 temperature 30.0 90 < th dose independent rect. 21 6
381 30.95 humidity 50.0 90 > th dose independent rect. 21 6
386 30.95 radiation 1.0 90 < th dose independent rect. 21 6
392 30.95 temperature 10.0 90 > th dose independent rect. 3 18
393 30.95 atmosphere 995.0 90 > th dose independent rect. 3 18
394 30.95 atmosphere 1015.0 90 < th dose independent rect. 3 18
396 30.95 precipitation 0.1 10 < th dose independent rect. 9 18
399 30.95 radiation 1.0 90 < th dose dependent rect. 21 6
407 30.95 precipitation 0.1 10 < th dose dependent rect. 9 18
420 30.96 humidity 70.0 270 > th dose independent rect. 18 8
422 30.96 atmosphere 1015.0 270 < th dose independent rect. 7 18
427 30.96 humidity 50.0 90 > th dose dependent rect. 3 12
429 30.97 atmosphere 1015.0 30 < th dose independent rect. 22 5
480 30.98 wind 9.0 30 < th dose dependent rect. 3 19
486 30.99 atmosphere 995.0 270 > th dose independent rect. 1 19
514 31.01 temperature 10.0 270 > th dose independent rect. 1 19
515 31.01 atmosphere 1015.0 270 < th dose independent rect. 1 19
522 31.01 humidity 50.0 270 > th dose dependent rect. 1 6
547 31.02 wind 9.0 10 < th dose dependent rect. 22 5
574 31.03 wind 9.0 30 < th dose independent rect. 9 18
594 31.04 temperature 30.0 30 < th dose independent rect. 3 8
615 31.06 wind 9.0 270 < th dose independent rect. 5 22
616 31.06 humidity 50.0 30 > th dose dependent rect. 22 5
622 31.07 atmosphere 1015.0 30 < th dose independent rect. 9 18
645 31.10 wind 9.0 270 < th dose independent rect. 15 15
659 31.11 temperature 10.0 270 > th dose dependent rect. 2 4
670 31.12 precipitation 0.1 270 < th dose independent rect. 5 22
676 31.12 precipitation 0.1 270 < th dose dependent rect. 5 22
685 31.14 temperature 30.0 270 < th dose independent rect. 18 8
738 31.17 temperature 10.0 270 > th dose dependent rect. 1 6
749 31.18 temperature 10.0 1440 > th dose independent rect. 23 5
752 31.18 temperature 30.0 1440 < th dose independent rect. 23 5
756 31.18 humidity 50.0 1440 > th dose independent rect. 23 5
765 31.18 atmosphere 995.0 1440 > th dose independent rect. 23 5
766 31.18 radiation 1.0 1440 < th dose independent rect. 23 5
788 31.18 precipitation 0.1 270 < th dose independent rect. 6 9
789 31.18 temperature 10.0 1440 > th dose independent rect. 4 19
796 31.18 radiation 1.0 1440 < th dose dependent rect. 23 5
802 31.18 precipitation 0.1 270 < th dose dependent rect. 6 9
827 31.19 wind 1.0 270 > th dose independent rect. 1 19
875 31.22 temperature 10.0 270 > th dose independent rect. 6 9
876 31.22 atmosphere 1015.0 270 < th dose independent rect. 6 9
877 31.22 temperature 10.0 270 > th dose independent rect. 15 15
884 31.23 wind 1.0 270 > th dose independent rect. 20 5
912 31.25 temperature 10.0 1440 > th dose independent rect. 4 6
915 31.25 atmosphere 995.0 1440 > th dose independent rect. 4 6
916 31.25 atmosphere 1015.0 1440 < th dose independent rect. 4 6
920 31.25 radiation 40.0 270 < th dose independent rect. 15 15
921 31.25 temperature 10.0 1440 > th dose independent rect. 10 18
924 31.25 atmosphere 995.0 270 > th dose independent rect. 7 18
982 31.30 wind 9.0 270 < th dose independent rect. 6 9