BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0118700 Os12g0118700|AK073862
(499 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0118700 Zinc finger, RING-type domain containing protein 1032 0.0
Os11g0119200 Zinc finger, RING-type domain containing protein 911 0.0
Os10g0487400 Zinc finger, RING-type domain containing protein 116 4e-26
Os06g0101300 Zinc finger, RING-type domain containing protein 106 4e-23
Os03g0351800 Zinc finger, RING-type domain containing protein 103 2e-22
Os05g0110000 Zinc finger, RING-type domain containing protein 103 3e-22
Os02g0727700 Zinc finger, RING-type domain containing protein 101 1e-21
Os08g0487500 Zinc finger, RING-type domain containing protein 101 2e-21
Os05g0488800 Zinc finger, RING-type domain containing protein 100 4e-21
Os01g0972000 Zinc finger, RING-type domain containing protein 92 6e-19
Os05g0495000 92 8e-19
Os02g0767600 92 9e-19
Os01g0802000 Zinc finger, RING-type domain containing protein 91 2e-18
Os03g0812200 Zinc finger, RING-type domain containing protein 89 9e-18
Os06g0633500 Zinc finger, RING-type domain containing protein 88 1e-17
Os03g0324900 Zinc finger, RING-type domain containing protein 87 4e-17
Os01g0276600 Zinc finger, RING-type domain containing protein 83 4e-16
Os03g0271600 Zinc finger, RING-type domain containing protein 81 2e-15
Os09g0434200 Zinc finger, RING-type domain containing protein 77 4e-14
Os02g0191500 Similar to Goliath homolog precursor (RING fin... 74 2e-13
Os08g0464400 Zinc finger, RING-type domain containing protein 74 3e-13
Os09g0242800 Zinc finger, RING-type domain containing protein 69 7e-12
Os09g0243200 Zinc finger, RING-type domain containing protein 68 1e-11
Os11g0142800 66 5e-11
>Os12g0118700 Zinc finger, RING-type domain containing protein
Length = 499
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/499 (100%), Positives = 499/499 (100%)
Query: 1 MSDHRTHASDCHPVASQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKMTVLNDDERDE 60
MSDHRTHASDCHPVASQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKMTVLNDDERDE
Sbjct: 1 MSDHRTHASDCHPVASQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKMTVLNDDERDE 60
Query: 61 ITSTYRQNTRRRQISRTASIDFLEDAFLQEFSQLIDLARRQGRETDIDSSSVAPQHASFN 120
ITSTYRQNTRRRQISRTASIDFLEDAFLQEFSQLIDLARRQGRETDIDSSSVAPQHASFN
Sbjct: 61 ITSTYRQNTRRRQISRTASIDFLEDAFLQEFSQLIDLARRQGRETDIDSSSVAPQHASFN 120
Query: 121 STPSQSQRWHASDDESDGLNYVDSVFGEIESAISLGDYGGDSDTSIEEHSVMTRRRISIQ 180
STPSQSQRWHASDDESDGLNYVDSVFGEIESAISLGDYGGDSDTSIEEHSVMTRRRISIQ
Sbjct: 121 STPSQSQRWHASDDESDGLNYVDSVFGEIESAISLGDYGGDSDTSIEEHSVMTRRRISIQ 180
Query: 181 LDNDSYMNTDTDIDPMNARLDQWDSDDQEDVEESGFDEIVNTMTQHQQQSHDIQLSGLSE 240
LDNDSYMNTDTDIDPMNARLDQWDSDDQEDVEESGFDEIVNTMTQHQQQSHDIQLSGLSE
Sbjct: 181 LDNDSYMNTDTDIDPMNARLDQWDSDDQEDVEESGFDEIVNTMTQHQQQSHDIQLSGLSE 240
Query: 241 DESEDGVWNWSVSVRQRANVTNLLDDMEEPEMRTTFVGNPDDYVDARQFEMLLEQFAEDN 300
DESEDGVWNWSVSVRQRANVTNLLDDMEEPEMRTTFVGNPDDYVDARQFEMLLEQFAEDN
Sbjct: 241 DESEDGVWNWSVSVRQRANVTNLLDDMEEPEMRTTFVGNPDDYVDARQFEMLLEQFAEDN 300
Query: 301 DSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSC 360
DSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSC
Sbjct: 301 DSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSC 360
Query: 361 ILPWLSSRNTCPVCRYELPTDDAEYERSKQATTNVRDIQVVEEISDEQEVQVTRQMAAGV 420
ILPWLSSRNTCPVCRYELPTDDAEYERSKQATTNVRDIQVVEEISDEQEVQVTRQMAAGV
Sbjct: 361 ILPWLSSRNTCPVCRYELPTDDAEYERSKQATTNVRDIQVVEEISDEQEVQVTRQMAAGV 420
Query: 421 IEETNTSEHNVRVDEQPNSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCR 480
IEETNTSEHNVRVDEQPNSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCR
Sbjct: 421 IEETNTSEHNVRVDEQPNSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCR 480
Query: 481 SPSATEVHVDTKKSWWSMF 499
SPSATEVHVDTKKSWWSMF
Sbjct: 481 SPSATEVHVDTKKSWWSMF 499
>Os11g0119200 Zinc finger, RING-type domain containing protein
Length = 491
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/488 (92%), Positives = 456/488 (93%)
Query: 12 HPVASQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKMTVLNDDERDEITSTYRQNTRR 71
H A QPDVQCLVCTRPFTLDAQVTDTFEALAICRDCK TVLND ERDEITST RR
Sbjct: 4 HQFAGQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKATVLNDVERDEITSTSHHTRRR 63
Query: 72 RQISRTASIDFLEDAFLQEFSQLIDLARRQGRETDIDSSSVAPQHASFNSTPSQSQRWHA 131
RQ SRTASID LEDAF QEFSQLIDLARRQGRETDIDSSSV PQHAS+N+TPS SQRWHA
Sbjct: 64 RQRSRTASIDSLEDAFSQEFSQLIDLARRQGRETDIDSSSVLPQHASYNATPSHSQRWHA 123
Query: 132 SDDESDGLNYVDSVFGEIESAISLGDYGGDSDTSIEEHSVMTRRRISIQLDNDSYMNTDT 191
SDDESDGLNYVDSVFGEIES IS GDYG DSDTSIEEHSV RRRISIQLDN SYMNTDT
Sbjct: 124 SDDESDGLNYVDSVFGEIESTISFGDYGADSDTSIEEHSVSARRRISIQLDNGSYMNTDT 183
Query: 192 DIDPMNARLDQWDSDDQEDVEESGFDEIVNTMTQHQQQSHDIQLSGLSEDESEDGVWNWS 251
DIDPMNARLDQWDSDDQEDVEESGFDE +NTMTQHQQQSHDIQLSGLSEDESEDGVWNWS
Sbjct: 184 DIDPMNARLDQWDSDDQEDVEESGFDETINTMTQHQQQSHDIQLSGLSEDESEDGVWNWS 243
Query: 252 VSVRQRANVTNLLDDMEEPEMRTTFVGNPDDYVDARQFEMLLEQFAEDNDSRRGAPPAAT 311
V+VRQRANVTNLL+DME PEMRTTFVGNPDDYVDARQFEMLLEQFAEDN SRRGAPPAAT
Sbjct: 244 VAVRQRANVTNLLEDMEGPEMRTTFVGNPDDYVDARQFEMLLEQFAEDNSSRRGAPPAAT 303
Query: 312 SFIENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTC 371
SFIENLPSVIIS SHQ N DVICPVCKDPIPTRARAKQLPCMHLYHSSCILPW SSRNTC
Sbjct: 304 SFIENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSRNTC 363
Query: 372 PVCRYELPTDDAEYERSKQATTNVRDIQVVEEISDEQEVQVTRQMAAGVIEETNTSEHNV 431
PVCRYELPTDDAEYERSKQATTNVRDIQVVEE SDEQEVQVTRQMA G IEETNTSEHNV
Sbjct: 364 PVCRYELPTDDAEYERSKQATTNVRDIQVVEENSDEQEVQVTRQMAVGAIEETNTSEHNV 423
Query: 432 RVDEQPNSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCRSPSATEVHVDT 491
RVDEQP+SARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCRSPSATEVHV T
Sbjct: 424 RVDEQPSSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCRSPSATEVHVGT 483
Query: 492 KKSWWSMF 499
KKSWWSMF
Sbjct: 484 KKSWWSMF 491
>Os10g0487400 Zinc finger, RING-type domain containing protein
Length = 304
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
Query: 258 ANVTNLLDDME---EPEMRTTFVGNPDDYVDARQFEMLLEQFAEDNDSRRGAPPAATSFI 314
AN+ LLDD P + + DY E L+EQ E++ +R G PPAA S +
Sbjct: 90 ANIQVLLDDASVGLAPGIGRVGGASFGDYFVGPGLEQLIEQLTENDPNRYGTPPAAKSAL 149
Query: 315 ENLPSVIISASHQTNGDVI-CPVCKDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPV 373
LP V+++ + D C VCK+ AKQ+PC H+YH+ CI+PWL N+CP+
Sbjct: 150 STLPDVVVTDAMVAAADGAECAVCKEDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPI 209
Query: 374 CRYELPTDDAEYERSKQA 391
CR+ELPTDD +YE K++
Sbjct: 210 CRFELPTDDPDYEGRKKS 227
>Os06g0101300 Zinc finger, RING-type domain containing protein
Length = 338
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 282 DYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQT-NGDVICPVCKDP 340
DY E L++Q AE++ +R G PPAA S + LP V +SA +G C VC D
Sbjct: 149 DYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDVAVSADMMAADGGAQCAVCMDD 208
Query: 341 IPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDDAEY 385
A AKQLPC H++H CILPWL ++CPVCR+ELPTDD +
Sbjct: 209 FHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHH 253
>Os03g0351800 Zinc finger, RING-type domain containing protein
Length = 283
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 279 NPDDYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCK 338
N DY + L+EQ +++ RRG PPA S I+ +P+V I+ H +GD CPVCK
Sbjct: 135 NIADYFVGPGLDDLIEQLTQND--RRGPPPATQSSIDAMPTVKITQRH-LSGDSHCPVCK 191
Query: 339 DPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELP 379
D + A+++PC HLYHS CI+PWL N+CPVCRYELP
Sbjct: 192 DKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELP 232
>Os05g0110000 Zinc finger, RING-type domain containing protein
Length = 333
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 282 DYVDARQFEMLLEQF----AEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVC 337
D++ FE LL+Q A R PPA+ + +E++P+V I+ASH D C VC
Sbjct: 88 DFLMGSGFERLLDQLTQIEAGGLARARENPPASKASVESMPTVTIAASH-VGADSHCAVC 146
Query: 338 KDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDDAEYERSKQAT 392
K+P A+++PC H+YH CILPWL+ RN+CPVCR+E+PTD A S T
Sbjct: 147 KEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEMPTDAARPRPSNAGT 201
>Os02g0727700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 314 IENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPV 373
+E+LP+V++ A+ GD C VCKD + RA++LPC HLYH CILPWL+ RNTCP+
Sbjct: 214 VESLPTVVVDAA---RGDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPL 270
Query: 374 CRYELPTDDAEYERSK 389
CR+ELPTDD EYE K
Sbjct: 271 CRHELPTDDPEYENWK 286
>Os08g0487500 Zinc finger, RING-type domain containing protein
Length = 271
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 304 RGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSCILP 363
+ PPAA S +E LPS +++A G+ C VC+D + R K+LPC H YH CI+P
Sbjct: 180 KSKPPAARSAVEALPSAVVAAGEDGEGEE-CAVCRDGVAAGERVKRLPCSHGYHEECIMP 238
Query: 364 WLSSRNTCPVCRYELPTDDAEYERSK 389
WL RN+CP+CR+ELPTDD +YE K
Sbjct: 239 WLDVRNSCPLCRFELPTDDPQYESWK 264
>Os05g0488800 Zinc finger, RING-type domain containing protein
Length = 323
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 6/104 (5%)
Query: 281 DDYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDP 340
++YV +LL+ AE + SR G PPA +E LP+V I V C VC D
Sbjct: 152 EEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALPTVKIEEV------VSCSVCLDD 205
Query: 341 IPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDDAE 384
+ ++AKQ+PC H +HSSCILPWL ++CPVCR+ELP+++ +
Sbjct: 206 LEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEETK 249
>Os01g0972000 Zinc finger, RING-type domain containing protein
Length = 334
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 289 FEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIPTRARAK 348
F+ LL + +D+ PPA+ + ++++P+++I A H D C VCK+P A A+
Sbjct: 89 FDRLLLRIPSASDNPN--PPASKAAVDSMPTILIGACHLA-ADSHCAVCKEPFHLAAEAR 145
Query: 349 QLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDD 382
++PC H+YH +CILPWL+ N+CPVCR+ +PTDD
Sbjct: 146 EMPCAHIYHHNCILPWLALHNSCPVCRHRMPTDD 179
>Os05g0495000
Length = 350
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 8/115 (6%)
Query: 272 MRTTFVGNPDDYVDARQ------FEMLLEQFAED-NDSRRGAPPAATSFIENLPSVIISA 324
+ F G P V+ R E L EQ SR+G PPA S I+ +P V IS
Sbjct: 171 LGVLFRGGPRVGVERRGGYYRAGLEALFEQLQNQLGSSRQGPPPAPPSAIDAMPVVTISR 230
Query: 325 SHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELP 379
H + CPVC+D A A+++PC HLYH+ CI+PWL N+CPVCR+ LP
Sbjct: 231 RH-LRAEPRCPVCQDEFQLGAEAREMPCAHLYHADCIVPWLVHHNSCPVCRHSLP 284
>Os02g0767600
Length = 335
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 279 NPDDYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCK 338
+P +Y + L+E+ +++ R G PA +S I++LP+V I+ +H ++G CPVCK
Sbjct: 147 DPGNYFNGPNLNNLIEELTQND--RPGPAPAPSSAIDSLPTVQITGAHLSDGSQ-CPVCK 203
Query: 339 DPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYEL 378
+ A+Q+PC H+YHS CI+PWL N+CPVCRY+L
Sbjct: 204 EDFELGEAARQMPCKHVYHSDCIVPWLRLHNSCPVCRYQL 243
>Os01g0802000 Zinc finger, RING-type domain containing protein
Length = 329
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 283 YVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIP 342
++ E L EQ N+ R+G PPA S I+++P V I+ H + D CPVC D
Sbjct: 143 FLVGPSLEALFEQLLLHNN-RQGPPPAPQSAIDSMPVVKINLRHLRD-DPHCPVCTDKFE 200
Query: 343 TRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELP 379
A+++PC HLYH+ CI+PWL N+CPVCR+ LP
Sbjct: 201 VGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
>Os03g0812200 Zinc finger, RING-type domain containing protein
Length = 369
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 282 DYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPI 341
DY ++LL+ AE + +R G PPA +E LP+V I + C VC +
Sbjct: 209 DYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTVNIQEV------LGCSVCLEDF 262
Query: 342 PTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDDAE 384
AK++PC H +HS CILPWL ++CP+CR++LPT++++
Sbjct: 263 EMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEESK 305
>Os06g0633500 Zinc finger, RING-type domain containing protein
Length = 124
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 42/56 (75%)
Query: 334 CPVCKDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDDAEYERSK 389
C VCKD I A QLPC HLYH +CI PWL+ RN+CPVCRYELPTDD EYE+ +
Sbjct: 50 CAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCRYELPTDDPEYEKRR 105
>Os03g0324900 Zinc finger, RING-type domain containing protein
Length = 320
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 302 SRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSCI 361
+R+G PPA + LP+V + H G CPVC D A+++PC H +H CI
Sbjct: 184 NRQGTPPARKEAVAALPTVRV---HDAAG-ATCPVCLDEFEAGGEAREMPCKHRFHDGCI 239
Query: 362 LPWLSSRNTCPVCRYELPTDD 382
LPWL + ++CPVCRY+LPTDD
Sbjct: 240 LPWLEAHSSCPVCRYQLPTDD 260
>Os01g0276600 Zinc finger, RING-type domain containing protein
Length = 329
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 282 DYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPI 341
DY + L+++ + + R+G PA +E++P+V ++A D C VC +
Sbjct: 163 DYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGGDC--DSACAVCLEDY 220
Query: 342 PTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPT 380
RA ++PC H +H+ CI+PWL ++CPVCR++LPT
Sbjct: 221 AAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPT 259
>Os03g0271600 Zinc finger, RING-type domain containing protein
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
Query: 289 FEMLLEQFA--EDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIPTRAR 346
F LL+QF+ E R PPA+ + +E++PSV ++ S C VC++ A
Sbjct: 96 FHRLLDQFSRLEAAAPR---PPASKAAVESMPSVTVAGS-----GAHCAVCQEAFEPGAS 147
Query: 347 AKQLPCMHLYHSSCILPWLSSRNTCPVCRYEL 378
A+++PC H+YH CILPWLS RN+CPVCR EL
Sbjct: 148 AREMPCKHVYHQDCILPWLSLRNSCPVCRREL 179
>Os09g0434200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 289 FEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISAS--HQTNGDVICPVCKDPIPTRAR 346
E LE+ ++ + PPA+ + NLP V ++ + + C VC++ + +
Sbjct: 193 LEAALEESLQNVMANPKVPPASKEVVANLPVVTVTEEIIARLGKETQCAVCRESLLVDDK 252
Query: 347 AKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDDAEY 385
++LPC HL+H C+ PWL N+CP+CR+EL TDD Y
Sbjct: 253 MQELPCKHLFHPPCLKPWLDENNSCPICRHELRTDDHVY 291
>Os02g0191500 Similar to Goliath homolog precursor (RING finger protein 130)
Length = 375
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 314 IENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPV 373
+E+LP +S + G C VCKD + LPC H +H CI PWL+ R TCPV
Sbjct: 258 VESLPEATLSEEEASRG---CAVCKDSFASGQIVALLPCKHYFHGDCIWPWLTIRTTCPV 314
Query: 374 CRYELPTDDAEYER 387
CR+++ T+D +YE+
Sbjct: 315 CRHQVRTEDDDYEQ 328
>Os08g0464400 Zinc finger, RING-type domain containing protein
Length = 211
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 334 CPVCKDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELPTDDAE 384
C +CKD +P A A++LPC HLYHS CI+ WL RN+CPVCR LP+D+ +
Sbjct: 74 CAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRSRLPSDEPQ 124
>Os09g0242800 Zinc finger, RING-type domain containing protein
Length = 163
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 282 DYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPI 341
DYVD F + ED G + + P V+ A+ G V C VC + I
Sbjct: 26 DYVDEESFPV------EDPPPVAGGARGGRQAVVSQPPVV-RATAGVAGTV-CSVCTEEI 77
Query: 342 PTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELP-TDDAEYE 386
+LPC H YH+ CI PWL R+TCP+CR ELP +DDA E
Sbjct: 78 AVADAVVRLPCAHWYHAGCISPWLGIRSTCPMCRAELPASDDAAEE 123
>Os09g0243200 Zinc finger, RING-type domain containing protein
Length = 155
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 317 LPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRY 376
LP+ ++ A + G V+C VC + + R +LPC H YH+ CI PWL R CP CR
Sbjct: 55 LPAAVL-APEEVAGAVVCAVCTEEVAARQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRA 113
Query: 377 ELPTDDA 383
ELP + A
Sbjct: 114 ELPREPA 120
>Os11g0142800
Length = 231
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 297 AEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCM--H 354
A+D+ + GA PA++ I NLP + + D CPVC + +++PC H
Sbjct: 109 ADDDGNGGGATPASSMAIVNLPEITVGDEKGEAKD--CPVCLQGFEEGDKLRKMPCADSH 166
Query: 355 LYHSSCILPWLSSRNTCPVCRYELPTDDAEYERSKQA 391
+H CI WL CP+CR+ LP + E E QA
Sbjct: 167 CFHEQCIFSWLLINRHCPLCRFPLPAETEEDEEVVQA 203
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.129 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,971,447
Number of extensions: 794464
Number of successful extensions: 3293
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 3273
Number of HSP's successfully gapped: 26
Length of query: 499
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 394
Effective length of database: 11,553,331
Effective search space: 4552012414
Effective search space used: 4552012414
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)