BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0437300 Os04g0437300|AK121647
(426 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0437300 U box domain containing protein 480 e-136
Os03g0275900 Similar to Spotted leaf protein 11 (Spotted le... 96 4e-20
Os02g0548700 U box domain containing protein 96 5e-20
Os12g0570000 Similar to Spotted leaf protein 11 (Spotted le... 96 7e-20
Os03g0232600 U box domain containing protein 95 1e-19
Os02g0540700 Similar to Arm repeat-containing protein 92 6e-19
Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 92 1e-18
Os02g0234300 U box domain containing protein 88 1e-17
Os04g0418500 U box domain containing protein 88 1e-17
Os09g0378700 U box domain containing protein 86 4e-17
Os01g0865700 U box domain containing protein 85 9e-17
Os02g0488701 U box domain containing protein 83 3e-16
Os02g0732200 U box domain containing protein 83 4e-16
Os01g0823900 Arm repeat protein 83 4e-16
Os05g0476700 Similar to Arm repeat protein 82 6e-16
Os02g0690600 U box domain containing protein 81 1e-15
Os08g0415600 U box domain containing protein 79 5e-15
Os06g0248500 U box domain containing protein 79 5e-15
Os03g0240600 U box domain containing protein 79 9e-15
Os05g0439400 Similar to Arm repeat containing protein 77 2e-14
Os01g0901000 Similar to Arm repeat-containing protein 77 2e-14
Os08g0481200 Similar to Arm repeat containing protein 77 3e-14
Os04g0589700 U box domain containing protein 76 4e-14
Os06g0726900 Similar to Arm repeat containing protein 76 5e-14
Os12g0161100 U box domain containing protein 76 6e-14
Os01g0884400 U box domain containing protein 75 1e-13
Os04g0686000 U box domain containing protein 74 1e-13
Os04g0417400 U box domain containing protein 74 2e-13
Os02g0738200 U box domain containing protein 73 3e-13
Os02g0539200 U box domain containing protein 73 4e-13
Os04g0489800 U box domain containing protein 73 4e-13
Os04g0348400 U box domain containing protein 72 5e-13
Os08g0110500 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 70 2e-12
Os01g0229700 U box domain containing protein 69 1e-11
>Os04g0437300 U box domain containing protein
Length = 426
Score = 480 bits (1235), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/409 (63%), Positives = 258/409 (63%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN
Sbjct: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
Query: 61 RTLRHLIERWLSTDQHHNHHXXXXXXXXXXXXXXXXXXXXXXXKRCLQQPDXXXXXXXXX 120
RTLRHLIERWLSTDQHHNHH KRCLQQPD
Sbjct: 61 RTLRHLIERWLSTDQHHNHHLPEPAAPAAEAEADAEEPSLAALKRCLQQPDAAGAGKAKV 120
Query: 121 XXXXXXMTLASESDVGRACMVQLGFLPVLLQLVFHAPAAPPSERRGGEAAVVEELALQCA 180
MTLASESDVGRACMVQLGFLPVLLQLVFHAPAAPPSERRGGEAAVVEELALQCA
Sbjct: 121 GALKKVMTLASESDVGRACMVQLGFLPVLLQLVFHAPAAPPSERRGGEAAVVEELALQCA 180
Query: 181 LGLMPSSAASPQLGCLNXXXXXXXXXXXXXXXXRGRGRTRAGLCXXXXXXXXXXXXXXXX 240
LGLMPSSAASPQLGCLN RGRGRTRAGLC
Sbjct: 181 LGLMPSSAASPQLGCLNVLKSEASLASLVALLERGRGRTRAGLCRLLEAVATAAATRELA 240
Query: 241 XXXXXSPRVWQALLPLLRHDGXXXXXXXXXXXXXXXXXXXXXXXXICASEPARGGAIHHG 300
SPRVWQALLPLLRHDG ICASEPARGGAIHHG
Sbjct: 241 LVVAASPRVWQALLPLLRHDGPAPTPAPPHDAHAASDAAVRAVAAICASEPARGGAIHHG 300
Query: 301 AVGALLGHLSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMAVARAPGGTRALVRHV 360
AVGALLGHLSW RMAVARAPGGTRALVRHV
Sbjct: 301 AVGALLGHLSWAASGKCASGGCAGAVPSALAAVEALAASEAGRMAVARAPGGTRALVRHV 360
Query: 361 FMMNSSNDGSEHAVAALLAVCRXXXXXXXXXXXXXXXTXXXXXXQSQCG 409
FMMNSSNDGSEHAVAALLAVCR T QSQCG
Sbjct: 361 FMMNSSNDGSEHAVAALLAVCRESRAARSEAAGAGVVTLLLLLLQSQCG 409
>Os03g0275900 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 726
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 10/85 (11%)
Query: 3 IPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRT 62
+P FRCPISLD+ DPV + TGQTY+R CIERWL AGH TCP T Q L + + L PN
Sbjct: 294 VPDDFRCPISLDLMKDPVIVATGQTYERGCIERWLEAGHDTCPKTQQKLPNKS-LTPNYV 352
Query: 63 LRHLIERWLSTD---------QHHN 78
LR LI +W + QHHN
Sbjct: 353 LRSLIAQWCEANGMEPPKRAAQHHN 377
>Os02g0548700 U box domain containing protein
Length = 417
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
+ +P FRCPISL++ DPVT+ TGQTYDR IE W+A G+ TCPVT PL A L+PN
Sbjct: 16 VQVPWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCPVTRSPLDRAFTLIPN 75
Query: 61 RTLRHLIERW 70
TLR LI+ W
Sbjct: 76 HTLRRLIQDW 85
>Os12g0570000 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 637
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
++IP FRCPISL++ DPV + TGQTY+R CIE+W+A+GH TCP T Q + +AL PN
Sbjct: 214 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMS-TSALTPN 272
Query: 61 RTLRHLIERWLSTD 74
LR LI +W T+
Sbjct: 273 YVLRSLISQWCETN 286
>Os03g0232600 U box domain containing protein
Length = 459
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 2 SIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNR 61
++P +F CPISL+ DPVTLCTGQTY+ I RWLA GHRTCP TMQ L D T +PN
Sbjct: 64 AVPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTP-IPNT 122
Query: 62 TLRHLIERWLS 72
TLR LI W S
Sbjct: 123 TLRQLIAAWFS 133
>Os02g0540700 Similar to Arm repeat-containing protein
Length = 505
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
+ +P FRCPISLD+ PV+LCTG TYDR I+RW+ +G+ TCP TM PL +T LVPN
Sbjct: 73 VKVPTFFRCPISLDVMRSPVSLCTGVTYDRASIQRWIDSGNTTCPATMLPL-PSTDLVPN 131
Query: 61 RTLRHLIERW 70
TLR LI W
Sbjct: 132 LTLRRLIALW 141
>Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 611
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 3 IPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRT 62
IP FRCPISL++ DPV + +GQTY+R CI++WL +GH+TCP T QPL T+L PN
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSH-TSLTPNFV 286
Query: 63 LRHLIERW 70
L+ LI +W
Sbjct: 287 LKSLISQW 294
>Os02g0234300 U box domain containing protein
Length = 581
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
S+P F CPISLD+ DPV TGQTYDRP I +W+ GH TCP + Q L D LVPN
Sbjct: 148 FSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHR-LVPN 206
Query: 61 RTLRHLIERW 70
R LR LI +W
Sbjct: 207 RALRSLISQW 216
>Os04g0418500 U box domain containing protein
Length = 451
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
+ IP FRCPISLD+ PV+LCTG TYDR I+RWL +G+ TCP TM PL +T LVPN
Sbjct: 35 VKIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPL-PSTDLVPN 93
Query: 61 RTLR 64
TLR
Sbjct: 94 LTLR 97
>Os09g0378700 U box domain containing protein
Length = 712
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 4 PHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRTL 63
P +CPI+LD+ TDPVT+ TGQTYDR I RW+ AG RTCPVT + L A LVPN L
Sbjct: 291 PEALQCPITLDLMTDPVTVSTGQTYDRASITRWMKAGCRTCPVTGERLSTAD-LVPNTVL 349
Query: 64 RHLIERWL 71
R +IER L
Sbjct: 350 RGIIERML 357
>Os01g0865700 U box domain containing protein
Length = 404
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 3 IPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAA--GHRTCPVTMQPLGDATALVPN 60
+P F CPISL + DPVTL TG +YDR I RWLAA RTCPVT QPL L PN
Sbjct: 8 VPSYFVCPISLQLMRDPVTLPTGISYDRAAIARWLAAPGARRTCPVTRQPLEHGLELTPN 67
Query: 61 RTLRHLIERWLST 73
TLR LI+ W ++
Sbjct: 68 HTLRRLIQSWAAS 80
>Os02g0488701 U box domain containing protein
Length = 423
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 2 SIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNR 61
++P F CPIS +I DPV L +GQTYDR I+ WL+AG+RTCP T Q L + T L+PN
Sbjct: 38 AVPEQFLCPISSEIMRDPVVLASGQTYDRRFIQEWLSAGNRTCPQTQQVLSN-TILIPNH 96
Query: 62 TLRHLIERW 70
+R +I +W
Sbjct: 97 LVRSMIAQW 105
>Os02g0732200 U box domain containing protein
Length = 637
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
++IP FRCPISL++ DPV + TGQTY+R I+RW+ G+RTCP T L + T L PN
Sbjct: 260 VAIPEDFRCPISLELMRDPVIVSTGQTYERAFIQRWIDCGNRTCPKTQLKLQNIT-LTPN 318
Query: 61 RTLRHLIERW 70
LR LI +W
Sbjct: 319 YVLRSLILQW 328
>Os01g0823900 Arm repeat protein
Length = 680
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 4 PHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRTL 63
P FRCPISLD+ DPV + +GQTYDR I+RW ++G TCP T Q L + LV N+ L
Sbjct: 275 PSDFRCPISLDLMRDPVVVASGQTYDRESIDRWFSSGKSTCPKTGQVLAN-LELVSNKAL 333
Query: 64 RHLIERW 70
++LI +W
Sbjct: 334 KNLISKW 340
>Os05g0476700 Similar to Arm repeat protein
Length = 677
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 7 FRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRTLRHL 66
FRCPISLD+ DPV +GQTYDR I RW +G TCP T Q L + LVPN+ L++L
Sbjct: 279 FRCPISLDLMRDPVVSASGQTYDRESITRWFGSGKSTCPKTGQVLAN-LELVPNKALKNL 337
Query: 67 IERW 70
I RW
Sbjct: 338 ISRW 341
>Os02g0690600 U box domain containing protein
Length = 425
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 4 PHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWL-AAGHRTCPVTMQPLGDATALVPNRT 62
P LF CPIS+++ DPVT+ TG TYDR IE WL G TCP TMQPL + L PN T
Sbjct: 8 PQLFLCPISMELMEDPVTVSTGVTYDRRSIEEWLFVYGRTTCPATMQPLSNFD-LTPNHT 66
Query: 63 LRHLIERWLS 72
L+ +I WL
Sbjct: 67 LKRVISSWLD 76
>Os08g0415600 U box domain containing protein
Length = 676
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 4 PHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRTL 63
P +CPI+L++ TDPVTL TGQTYDR I+RW+ +G RTCPVT + L A +VPN +
Sbjct: 270 PEGLQCPITLELMTDPVTLATGQTYDRASIKRWVKSGCRTCPVTGEKLRSAD-VVPNVAV 328
Query: 64 RHLIERWL 71
R ++E+ L
Sbjct: 329 RGIVEQLL 336
>Os06g0248500 U box domain containing protein
Length = 449
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
+S+P F CPISL++ DPVT TG TYDR +E WLA GH TCPVT +P+ A LVPN
Sbjct: 36 VSVPANFVCPISLEMMRDPVTAPTGITYDRESVEGWLARGHDTCPVTGRPVRLAD-LVPN 94
Query: 61 RTLRHLIERW 70
R +I+ W
Sbjct: 95 HATRRMIQDW 104
>Os03g0240600 U box domain containing protein
Length = 445
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
++IP FRCPISLD+ DPVT TG TYDR IE WL G CPVT PL LVPN
Sbjct: 32 LAIPAHFRCPISLDLMRDPVTAPTGITYDREGIEAWLDTGRAVCPVTHAPLRHED-LVPN 90
Query: 61 RTLRHLIERW 70
+R +I+ W
Sbjct: 91 HAIRRVIQDW 100
>Os05g0439400 Similar to Arm repeat containing protein
Length = 452
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 2 SIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
S P FRCPISL++ PV+L TG TYDR I+RWL GHRTCP T PL +T LVPN
Sbjct: 27 STPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLA-STDLVPN 84
>Os01g0901000 Similar to Arm repeat-containing protein
Length = 800
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 1 MSIP-HLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVP 59
MSIP RCPISL + DPV + +GQTY+R CIE+W GH TCP T Q L +L P
Sbjct: 290 MSIPPEELRCPISLQLMYDPVIISSGQTYERVCIEKWFNDGHSTCPKTQQQLSH-LSLTP 348
Query: 60 NRTLRHLIERW 70
N ++ LI W
Sbjct: 349 NYCVKALIASW 359
>Os08g0481200 Similar to Arm repeat containing protein
Length = 642
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
+ IP+ F CPI+L I DPV + TGQTY+R I++WL +G RTCP T Q L +L PN
Sbjct: 267 LMIPNDFLCPITLAIMRDPVIVATGQTYERRSIQKWLDSGERTCPKTRQRLS-HMSLAPN 325
Query: 61 RTLRHLIERW 70
L++LI W
Sbjct: 326 YALKNLILEW 335
>Os04g0589700 U box domain containing protein
Length = 421
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERW-LAAGHRTCPVTMQPLGDATALVP 59
M P LF CPIS+++ DPVT+ TG TYDR IERW G TCP TMQ L + P
Sbjct: 3 MEPPPLFLCPISMELMEDPVTVATGVTYDRRSIERWFFKYGKTTCPATMQRLA-SFDFTP 61
Query: 60 NRTLRHLIERWLS 72
N TL+ +I WL
Sbjct: 62 NHTLKRVISSWLD 74
>Os06g0726900 Similar to Arm repeat containing protein
Length = 621
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
+ IP+ F CPISL+I TDP TY+R I++WL AG RTCP T QPLG +L PN
Sbjct: 258 LMIPNDFLCPISLEIMTDP-------TYERRSIQKWLDAGQRTCPKTQQPLG-HLSLAPN 309
Query: 61 RTLRHLIERWLSTDQHHNH 79
L++LI +W ++ H
Sbjct: 310 YALKNLIMQWCDKNKVEIH 328
>Os12g0161100 U box domain containing protein
Length = 437
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 4 PHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRTL 63
P F CPISL DPVT TG +YDR I RWLAAGH +CPVT PL + L PN TL
Sbjct: 6 PQHFMCPISLQPMQDPVTSPTGISYDRRAIHRWLAAGHSSCPVTGHPLS-LSDLTPNLTL 64
Query: 64 RHLIERWLSTDQHHN 78
R LI W HH+
Sbjct: 65 RRLIHSW-----HHS 74
>Os01g0884400 U box domain containing protein
Length = 796
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
++IP F CP+SL++ +DPV + +GQTY+ I +W G+ CP T Q LG T L+PN
Sbjct: 222 VTIPADFCCPLSLELMSDPVIVASGQTYEHVFIRKWFDLGYNICPKTRQILG-HTKLIPN 280
Query: 61 RTLRHLIERW 70
T++ LIE W
Sbjct: 281 FTVKQLIENW 290
>Os04g0686000 U box domain containing protein
Length = 413
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 4 PHLFRCPISLDIFTDPVTLCTGQTYDRPCIERW-LAAGHRTCPVTMQPLGDATALVPNRT 62
P F CPISL I DPVTL TG TYDR IERW L AG TCP+T QP+ PN T
Sbjct: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAG--TCPLTKQPVPPDCDPTPNHT 71
Query: 63 LRHLIERWLSTDQHH 77
LR LI+ W + H
Sbjct: 72 LRRLIQSWCALHADH 86
>Os04g0417400 U box domain containing protein
Length = 451
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERW-LAAGHRTCPVTMQPLGDAT-ALV 58
+ + F CPISL+I DPVTL TG TYDR IERW GH CPVT Q L A
Sbjct: 13 VEVLSYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPT 72
Query: 59 PNRTLRHLIERW 70
PN TLR LI+ W
Sbjct: 73 PNHTLRRLIQGW 84
>Os02g0738200 U box domain containing protein
Length = 456
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 2 SIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNR 61
+P F CPISLD+ DPVT TG TYDR +E WL G TCPVT +PL LVPN
Sbjct: 42 DVPDHFLCPISLDMMRDPVTAPTGITYDRDGVEVWLERGRPTCPVTGRPLR-PEELVPNH 100
Query: 62 TLRHLIERW 70
R +I+ W
Sbjct: 101 ATRRMIQEW 109
>Os02g0539200 U box domain containing protein
Length = 442
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 2 SIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWL------AAGHRTCPVTMQPLGDAT 55
+P F CPISL+I DPVTL TG TYDR IERW+ G TCPVT + L A
Sbjct: 7 EVPSYFLCPISLEIMRDPVTLATGITYDRSSIERWMFGGGGGDGGKGTCPVTRRQLAPAE 66
Query: 56 -ALVPNRTLRHLIERW 70
PN TLR LI+ W
Sbjct: 67 REATPNHTLRRLIQAW 82
>Os04g0489800 U box domain containing protein
Length = 800
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 PHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRTL 63
P RCPISL + DPV + +GQTY+R CIE+W ++G+ TCP T L ++ PN +
Sbjct: 280 PEELRCPISLQLMHDPVIIASGQTYERACIEKWFSSGNTTCPKTRNELSQ-LSMTPNYCI 338
Query: 64 RHLIERW 70
+ LI W
Sbjct: 339 KGLIASW 345
>Os04g0348400 U box domain containing protein
Length = 459
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 4 PHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRTL 63
P LF CPIS I DPV + +GQTYDR I+ W +AG++ CP T Q L T ++PN +
Sbjct: 76 PALFLCPISSGIMRDPVVIESGQTYDRRSIQEWFSAGNQICPQTQQVLS-HTIVIPNHLV 134
Query: 64 RHLIERW 70
R +I +W
Sbjct: 135 RTMISQW 141
>Os08g0110500 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 824
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 3 IPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRT 62
IP F CP+SL++ +DPV + +GQTY+R I+ WL G CP T Q LG + L+PN T
Sbjct: 229 IPADFCCPLSLELMSDPVIVASGQTYERVYIKLWLDEGFTICPKTRQRLGHSN-LIPNYT 287
Query: 63 LRHLIERW 70
++ LI W
Sbjct: 288 VKALIANW 295
>Os01g0229700 U box domain containing protein
Length = 1392
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%)
Query: 1 MSIPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPN 60
++ P F CPI+ +F DPVTL TGQTY+R I+ WL G+ TCP+T L A N
Sbjct: 422 VATPKDFVCPITSQVFDDPVTLETGQTYERRAIQEWLDRGNATCPITRHRLHGAHLPSTN 481
Query: 61 RTLRHLIERW 70
L+ LI W
Sbjct: 482 YVLKRLIAAW 491
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.136 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,869,425
Number of extensions: 301629
Number of successful extensions: 1200
Number of sequences better than 1.0e-10: 35
Number of HSP's gapped: 1179
Number of HSP's successfully gapped: 35
Length of query: 426
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 322
Effective length of database: 11,605,545
Effective search space: 3736985490
Effective search space used: 3736985490
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)