Os02g0738200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : U box domain containing protein.
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Os02g0738200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : U box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 433.17 | 0.978 | 8.86 | 2.95 | 0.919 | 1.71 | 0.287 | -4.62 | 1.08 | 4.23 | 0.4994 | 3590 | -- | -- |
| 447.35 | 0.985 | 8.9 | 3.13 | 0.956 | 1.38 | 0.399 | -- | 1.11 | 4.04 | 0.5 | 3722 | -- | -- |
| 433.39 | 0.97 | 8.86 | 2.94 | 0.92 | 1.71 | -- | -4.63 | 1.08 | 4.27 | 0.5 | 3589 | -- | -- |
| 447.5 | 0.985 | 8.91 | 3.09 | 0.952 | 1.33 | -- | -- | 1.1 | 4.2 | 0.4928 | 3695 | -- | -- |
| 479 | 1.02 | 8.86 | 2.98 | -- | 1.79 | -- | -4.92 | 1.1 | -- | 0.4995 | 3580 | -- | -- |
| 466.56 | 1.01 | 8.88 | 2.87 | 0.951 | -- | 0.0973 | -- | 1.2 | 4.12 | -- | -- | -- | -- |
| 466.59 | 1.01 | 8.88 | 2.87 | 0.952 | -- | -- | -- | 1.2 | 4.13 | -- | -- | -- | -- |
| 496.54 | 1.04 | 8.91 | 3.13 | -- | 1.33 | -- | -- | 1.12 | -- | 0.4517 | 3708 | -- | -- |
| 668.51 | 1.2 | 8.99 | -- | 0.95 | 1.12 | -- | -- | 0.759 | 3.31 | 0.5 | 16497 | -- | -- |
| 515.74 | 1.06 | 8.89 | 2.91 | -- | -- | -- | -- | 1.22 | -- | -- | -- | -- | -- |
| 683.59 | 1.22 | 8.96 | -- | 1.01 | -- | -- | -- | 0.88 | 4.08 | -- | -- | -- | -- |
| 713.72 | 1.24 | 9 | -- | -- | 0.688 | -- | -- | 0.651 | -- | 0.5 | 45542 | -- | -- |
| 738.79 | 1.27 | 8.96 | -- | -- | -- | -- | -- | 0.902 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 412.02 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 10 | 412.11 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 14 | 412.11 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 20 | 412.12 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 22 | 412.19 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 25 | 412.30 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 30 | 412.64 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 35 | 412.96 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 36 | 413.04 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 41 | 413.33 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 45 | 413.41 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 63 | 413.71 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 97 | 414.13 | atmosphere | 1000.0 | 14400 | < th | dose dependent | sin | 16 | NA |
| 120 | 414.37 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 140 | 414.52 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 259 | 415.34 | atmosphere | 1000.0 | 14400 | < th | dose dependent | no | NA | NA |
| 268 | 415.38 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 23 | 23 |
| 282 | 415.44 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 20 | 23 |
| 292 | 415.49 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 409 | 416.28 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 496 | 416.83 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 697 | 417.62 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 10 | 16 |
| 719 | 417.64 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 821 | 417.79 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 860 | 417.84 | atmosphere | 1000.0 | 14400 | < th | dose independent | no | NA | NA |
| 871 | 417.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 875 | 417.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 889 | 417.89 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 912 | 417.92 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 923 | 417.94 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 950 | 417.99 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 996 | 418.06 | atmosphere | 1000.0 | 14400 | > th | dose independent | no | NA | NA |