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Os01g0865700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : U box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.51 (0.0312) R2 : 0.646
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.62 (0.0751) R2dC : 0.371 R2C : 0.243
β3 : -2.54 (0.126) R2dE : 0.324 R2E : 0.217
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.522 (0.0656) R2dN8 : 0.0638 R2N8 : 0.0667
σ : 0.584
deviance : 157.46
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C
peak time of C : 11.7
E
wheather : temperature
threshold : 9.503
memory length : 86
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.33
open length of G : 21.7

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
155.8 0.586 7.5 0.0077 1.62 -2.5 -0.351 1.44 -0.509 11.6 9.729 87 7.18 21.8
157.01 0.584 7.52 -0.0812 1.61 -2.49 -0.103 -- -0.527 11.7 9.665 86 7.32 21.7
155.94 0.582 7.5 -0.00147 1.63 -2.52 -- 1.23 -0.504 11.7 9.797 87 7.27 21.7
157 0.584 7.52 -0.115 1.62 -2.52 -- -- -0.535 11.7 9.576 86 7.34 21.7
198.19 0.656 7.48 0.446 -- -2.89 -- 2.02 -0.37 -- -9.649 614 6.65 21.6
239.81 0.726 7.54 -0.536 1.68 -- -0.252 -- -0.687 9.35 -- -- -- --
240.04 0.726 7.54 -0.545 1.69 -- -- -- -0.687 9.35 -- -- -- --
198.52 0.656 7.58 -0.0676 -- -2.79 -- -- -0.482 -- -19.8 571 6.22 21.9
157.46 0.584 7.51 -- 1.62 -2.54 -- -- -0.522 11.7 9.503 86 7.33 21.7
406.03 0.942 7.58 -0.554 -- -- -- -- -0.681 -- -- -- -- --
247.88 0.736 7.52 -- 1.69 -- -- -- -0.627 9.38 -- -- -- --
193.58 0.648 7.53 -- -- -2.68 -- -- -0.442 -- -41.37 631 6 22.2
414.13 0.95 7.57 -- -- -- -- -- -0.619 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 156.88 temperature 10 90 > th dose dependent rect. 7 22
9 166.30 temperature 30 90 < th dose dependent rect. 5 14
32 173.46 temperature 30 90 < th dose dependent rect. 5 18
37 174.15 temperature 10 270 > th dose dependent rect. 23 14
52 177.26 temperature 30 30 < th dose dependent rect. 5 21
63 178.84 temperature 30 270 < th dose dependent rect. 3 14
67 179.09 temperature 30 30 < th dose independent rect. 5 14
69 179.22 temperature 30 270 < th dose dependent rect. 2 21
75 179.70 temperature 30 90 < th dose dependent rect. 5 8
86 180.54 temperature 30 270 < th dose dependent rect. 3 19
117 182.08 humidity 60 90 > th dose dependent rect. 5 14
120 182.27 temperature 10 720 > th dose dependent rect. 16 19
126 182.75 humidity 60 30 > th dose dependent rect. 5 21
133 183.06 temperature 15 90 > th dose dependent rect. 8 13
137 183.19 temperature 25 4320 < th dose dependent rect. 24 2
153 183.58 temperature 10 4320 > th dose dependent rect. 24 2
198 184.20 temperature 10 270 > th dose dependent rect. 16 23
205 184.26 temperature 10 4320 > th dose dependent rect. 23 11
206 184.26 temperature 30 4320 < th dose dependent rect. 23 11
262 184.62 temperature 10 4320 > th dose dependent sin 8 NA
283 184.69 temperature 30 4320 < th dose dependent sin 8 NA
394 184.94 temperature 10 720 > th dose dependent rect. 8 3
481 185.09 temperature 30 4320 < th dose dependent rect. 19 10
731 185.48 temperature 15 10 > th dose dependent rect. 8 14
765 185.54 temperature 10 4320 > th dose dependent rect. 13 21
936 185.74 temperature 10 4320 > th dose dependent no NA NA
946 185.74 temperature 10 4320 > th dose dependent rect. 7 23