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Os01g0823900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Arm repeat protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0313) R2 : 0.244
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.47 (0.123) R2dE : 0.246 R2E : 0.244
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0206 (0.0667) R2dN8 : 0.000214 R2N8 : -0.00204
σ : 0.586
deviance : 158.35
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 5.283
memory length : 1914
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
134.58 0.545 10.2 0.48 0.573 2.37 -1.38 3.36 0.0675 4.12 0.9924 1488 -- --
136.35 0.544 10.2 0.761 0.502 1.81 -1.1 -- 0.102 4.84 2.487 1531 -- --
139.49 0.55 10.2 0.501 0.586 2.49 -- 3.54 0.0823 4.58 0.9995 1483 -- --
138.65 0.548 10.2 0.758 0.45 2 -- -- 0.115 6.43 2.477 1553 -- --
151.66 0.574 10.2 0.605 -- 2.66 -- 3.1 0.147 -- 0.9855 1539 -- --
169.74 0.611 10.2 0.417 0.701 -- -1.3 -- -0.0922 3.29 -- -- -- --
175.18 0.62 10.2 0.443 0.696 -- -- -- -0.0847 3.36 -- -- -- --
146.42 0.564 10.1 0.748 -- 1.96 -- -- 0.157 -- 2.548 1602 -- --
151.93 0.574 10.2 -- 0.486 1.61 -- -- 0.0407 5.44 3.097 1552 -- --
202.46 0.665 10.2 0.472 -- -- -- -- -0.0663 -- -- -- -- --
180.34 0.628 10.2 -- 0.705 -- -- -- -0.134 3.36 -- -- -- --
158.35 0.586 10.2 -- -- 1.47 -- -- 0.0206 -- 5.283 1914 -- --
208.34 0.674 10.2 -- -- -- -- -- -0.119 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 133.28 radiation 1 720 < th dose dependent rect. 5 14
2 134.68 humidity 50 720 > th dose dependent rect. 8 19
3 135.00 temperature 30 720 < th dose independent rect. 15 21
6 135.36 temperature 30 270 < th dose independent rect. 7 13
8 136.10 humidity 50 720 > th dose dependent rect. 24 20
11 136.18 radiation 1 720 < th dose independent rect. 5 14
15 136.55 radiation 1 720 < th dose dependent rect. 5 22
22 137.18 radiation 1 1440 < th dose dependent sin 23 NA
24 137.20 radiation 1 1440 < th dose dependent rect. 7 23
27 137.28 temperature 30 720 < th dose independent rect. 15 13
28 137.35 temperature 30 720 < th dose independent rect. 7 21
32 137.45 temperature 30 720 < th dose independent rect. 8 11
34 137.45 radiation 1 1440 < th dose dependent rect. 5 19
38 137.48 temperature 30 720 < th dose independent rect. 15 5
40 137.49 radiation 1 1440 < th dose independent rect. 7 23
41 137.49 radiation 1 1440 < th dose dependent rect. 5 17
59 137.71 radiation 1 720 < th dose independent rect. 6 21
61 137.71 radiation 1 1440 < th dose dependent rect. 19 23
68 137.84 radiation 1 1440 < th dose dependent rect. 8 16
72 137.84 radiation 1 1440 < th dose dependent rect. 7 20
77 137.85 radiation 1 1440 < th dose dependent rect. 23 19
82 137.88 radiation 1 1440 < th dose dependent rect. 2 16
84 137.89 radiation 1 1440 < th dose dependent rect. 8 14
97 137.91 radiation 1 1440 < th dose dependent no NA NA
103 137.91 radiation 1 1440 < th dose dependent rect. 23 22
111 137.93 humidity 50 720 > th dose dependent rect. 7 13
123 137.94 radiation 1 1440 < th dose dependent rect. 12 23
139 138.02 radiation 1 1440 > th dose independent rect. 7 23
177 138.15 temperature 30 720 < th dose independent rect. 24 19
194 138.30 radiation 1 1440 < th dose dependent rect. 12 13
197 138.31 radiation 1 1440 < th dose dependent sin 15 NA
244 138.42 radiation 1 1440 < th dose independent rect. 5 19
259 138.45 radiation 1 1440 < th dose independent rect. 5 16
269 138.49 radiation 1 1440 < th dose dependent rect. 16 23
271 138.50 radiation 1 1440 < th dose independent rect. 2 22
283 138.52 radiation 1 1440 < th dose independent rect. 23 23
286 138.53 radiation 1 1440 < th dose independent no NA NA
311 138.55 radiation 1 1440 < th dose independent rect. 20 23
321 138.57 radiation 1 1440 < th dose independent rect. 11 23
358 138.70 radiation 1 1440 < th dose independent sin 23 NA
381 138.83 radiation 1 1440 < th dose independent rect. 16 23
395 138.95 humidity 50 720 > th dose dependent rect. 14 13
398 138.97 radiation 1 1440 > th dose independent rect. 13 17
402 139.00 radiation 1 1440 > th dose independent rect. 5 14
413 139.01 humidity 50 1440 > th dose dependent rect. 15 17
414 139.03 radiation 1 1440 > th dose independent rect. 11 19
426 139.07 radiation 1 1440 > th dose independent rect. 11 23
429 139.09 radiation 1 1440 > th dose independent no NA NA
491 139.19 radiation 1 1440 > th dose independent sin 23 NA
511 139.27 humidity 50 270 > th dose dependent rect. 15 11
513 139.28 radiation 10 720 < th dose dependent rect. 16 11
515 139.31 radiation 1 1440 < th dose independent sin 14 NA
546 139.48 radiation 1 1440 > th dose independent rect. 16 23
565 139.57 humidity 50 1440 > th dose dependent sin 14 NA
585 139.69 humidity 50 720 > th dose dependent rect. 16 3
590 139.73 humidity 90 1440 < th dose dependent rect. 15 17
604 139.79 humidity 80 1440 < th dose independent rect. 23 21
611 139.82 temperature 30 720 < th dose independent rect. 7 5
626 139.88 humidity 80 1440 < th dose independent rect. 3 17
633 139.90 radiation 1 1440 > th dose independent sin 14 NA
652 139.97 temperature 10 270 > th dose dependent rect. 3 14
656 139.98 radiation 1 1440 < th dose independent rect. 7 17
671 140.02 radiation 1 1440 < th dose independent rect. 7 15
682 140.05 humidity 70 1440 > th dose dependent rect. 18 2
721 140.19 humidity 90 1440 < th dose dependent sin 13 NA
722 140.19 temperature 25 14400 > th dose dependent rect. 15 1
748 140.33 radiation 1 1440 > th dose independent rect. 7 12
778 140.39 humidity 80 720 > th dose independent rect. 7 13
797 140.45 humidity 80 1440 > th dose independent rect. 3 18
799 140.46 humidity 70 1440 < th dose independent rect. 14 3
839 140.58 humidity 80 1440 < th dose independent rect. 7 19
951 140.81 humidity 90 90 < th dose dependent rect. 13 18
983 140.85 temperature 30 14400 > th dose independent rect. 15 1
984 140.85 temperature 30 14400 < th dose independent rect. 15 1
985 140.85 humidity 80 1440 < th dose independent rect. 11 23