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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0481200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Arm repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.0167) R2 : 0.0291
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.13 (0.0353) R2dN8 : 0.0375 R2N8 : 0.0291
σ : 0.315
deviance : 45.65
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.07 0.308 2.94 0.408 0.0246 -0.396 0.16 2.86 0.201 9 26.6 264 -- --
44.43 0.313 2.98 0.119 0.0824 -0.0709 -0.286 -- 0.142 4.29 25.7 247 -- --
43.13 0.306 2.94 0.397 0.0412 -0.375 -- 2.81 0.197 6.67 26.7 251 -- --
44.35 0.31 2.97 0.147 0.106 -0.0935 -- -- 0.14 5.05 26.2 1659 -- --
43.18 0.306 2.94 0.407 -- -0.407 -- 2.86 0.196 -- 26.7 261 -- --
44.51 0.313 2.98 0.109 0.107 -- -0.26 -- 0.139 4.28 -- -- -- --
44.67 0.313 2.98 0.112 0.109 -- -- -- 0.14 5.04 -- -- -- --
44.65 0.311 2.98 0.138 -- -0.155 -- -- 0.149 -- 25.7 268 -- --
44.83 0.312 2.98 -- 0.112 -0.0717 -- -- 0.128 4.88 26.39 1651 -- --
45.3 0.314 2.98 0.115 -- -- -- -- 0.143 -- -- -- -- --
45 0.314 2.98 -- 0.111 -- -- -- 0.128 5.01 -- -- -- --
45.14 0.313 2.98 -- -- -0.137 -- -- 0.133 -- 25.74 268 -- --
45.65 0.315 2.98 -- -- -- -- -- 0.13 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 40.35 radiation 40.0 43200 < th dose dependent rect. 23 1
3 40.42 humidity 80.0 30 > th dose independent rect. 22 1
4 40.44 wind 3.0 30 < th dose independent rect. 22 1
5 40.44 wind 5.0 30 < th dose dependent rect. 22 1
6 40.44 radiation 20.0 4320 < th dose dependent rect. 23 1
9 40.45 wind 9.0 1440 < th dose independent rect. 23 1
10 40.45 temperature 25.0 30 > th dose independent rect. 22 1
11 40.45 temperature 10.0 1440 > th dose independent rect. 23 1
14 40.45 temperature 30.0 1440 < th dose independent rect. 23 1
18 40.45 humidity 50.0 1440 > th dose independent rect. 23 1
28 40.45 atmosphere 995.0 1440 > th dose independent rect. 23 1
29 40.45 radiation 1.0 1440 < th dose independent rect. 23 1
49 40.45 temperature 10.0 1440 > th dose independent rect. 24 23
54 40.45 humidity 60.0 30 > th dose dependent rect. 22 1
56 40.45 radiation 1.0 1440 < th dose dependent rect. 23 1
63 40.46 temperature 10.0 30 > th dose dependent rect. 22 1
67 40.46 atmosphere 995.0 30 > th dose dependent rect. 22 1
73 40.47 temperature 10.0 30 > th dose independent rect. 22 1
76 40.47 temperature 30.0 30 < th dose independent rect. 22 1
77 40.47 humidity 50.0 30 > th dose independent rect. 22 1
80 40.47 atmosphere 995.0 30 > th dose independent rect. 22 1
83 40.47 atmosphere 1010.0 30 < th dose independent rect. 22 1
85 40.47 radiation 1.0 30 < th dose independent rect. 22 1
90 40.47 precipitation 0.1 30 < th dose independent rect. 22 1
91 40.47 temperature 10.0 30 > th dose independent rect. 23 23
92 40.47 radiation 1.0 30 < th dose dependent rect. 22 1
97 40.47 precipitation 0.1 30 < th dose dependent rect. 22 1
98 40.48 wind 1.0 30 > th dose independent rect. 22 1
102 40.50 humidity 90.0 30 < th dose independent rect. 22 1
104 40.51 atmosphere 1015.0 30 < th dose dependent rect. 22 1
112 40.59 temperature 30.0 30 < th dose dependent rect. 22 1
113 40.61 wind 1.0 30 > th dose dependent rect. 22 1
117 40.64 humidity 90.0 30 < th dose dependent rect. 22 1
155 40.80 wind 9.0 30 < th dose independent rect. 23 23
161 41.04 precipitation 0.1 30 < th dose independent rect. 23 23
162 41.04 precipitation 0.1 30 < th dose dependent rect. 23 23
163 41.06 atmosphere 995.0 30 > th dose independent rect. 23 23
185 41.53 temperature 25.0 90 > th dose independent rect. 20 11
193 41.73 precipitation 0.1 1440 < th dose independent rect. 23 1
195 41.73 precipitation 0.1 1440 < th dose dependent rect. 23 1
200 41.86 temperature 25.0 90 > th dose dependent rect. 20 11
215 42.11 humidity 50.0 30 > th dose independent rect. 23 23
226 42.24 temperature 25.0 30 > th dose dependent rect. 6 1
227 42.25 radiation 10.0 30 < th dose dependent rect. 23 23
237 42.30 atmosphere 1005.0 30 > th dose dependent rect. 20 3
240 42.34 atmosphere 1010.0 30 < th dose independent rect. 6 1
246 42.38 radiation 10.0 30 < th dose independent rect. 6 1
253 42.40 temperature 25.0 90 > th dose independent rect. 20 7
256 42.40 temperature 25.0 90 > th dose dependent rect. 20 7
273 42.49 temperature 25.0 720 > th dose dependent rect. 7 1
279 42.51 wind 3.0 30 > th dose dependent rect. 6 1
286 42.54 wind 9.0 720 < th dose independent rect. 3 8
299 42.59 temperature 25.0 720 > th dose independent rect. 7 2
302 42.59 temperature 10.0 720 > th dose dependent rect. 7 4
313 42.62 atmosphere 1015.0 720 < th dose independent rect. 3 8
320 42.64 humidity 50.0 720 > th dose independent rect. 3 8
321 42.64 atmosphere 1010.0 30 < th dose dependent rect. 6 1
323 42.64 temperature 25.0 720 > th dose dependent rect. 23 11
329 42.66 temperature 10.0 720 > th dose independent rect. 3 8
330 42.66 atmosphere 995.0 720 > th dose independent rect. 3 8
332 42.66 temperature 10.0 720 > th dose independent rect. 11 16
333 42.67 temperature 25.0 720 > th dose independent rect. 7 4
339 42.67 temperature 25.0 720 > th dose dependent rect. 24 9
341 42.67 temperature 10.0 30 > th dose dependent rect. 23 23
346 42.69 temperature 25.0 720 > th dose dependent rect. 3 6
359 42.71 precipitation 0.1 720 < th dose independent rect. 23 16
361 42.71 precipitation 0.1 720 < th dose dependent rect. 23 16
362 42.72 precipitation 0.1 720 < th dose independent rect. 3 8
364 42.72 precipitation 0.1 720 < th dose dependent rect. 3 8
366 42.73 temperature 10.0 720 > th dose independent rect. 15 8
367 42.73 temperature 10.0 720 > th dose independent rect. 23 16
370 42.74 precipitation 0.1 720 < th dose independent rect. 7 8
372 42.74 precipitation 0.1 720 < th dose dependent rect. 7 8
376 42.75 atmosphere 995.0 720 > th dose independent rect. 23 16
385 42.76 temperature 15.0 720 > th dose independent rect. 3 16
386 42.76 temperature 30.0 30 < th dose independent rect. 23 23
391 42.77 atmosphere 1015.0 720 < th dose independent rect. 3 16
414 42.79 humidity 90.0 30 < th dose dependent rect. 6 1
424 42.81 wind 9.0 720 < th dose independent rect. 19 8
426 42.81 atmosphere 995.0 10 > th dose independent rect. 16 14
429 42.82 temperature 25.0 90 < th dose independent rect. 21 9
435 42.83 temperature 15.0 720 > th dose independent rect. 7 8
445 42.84 temperature 15.0 720 > th dose independent rect. 19 8
448 42.84 wind 5.0 30 < th dose dependent rect. 20 3
458 42.85 radiation 30.0 10 < th dose dependent rect. 16 14
463 42.86 temperature 30.0 720 < th dose independent rect. 19 8
464 42.86 humidity 50.0 720 > th dose independent rect. 19 8
465 42.86 atmosphere 995.0 720 > th dose independent rect. 19 8
466 42.86 radiation 1.0 720 < th dose independent rect. 19 8
477 42.86 radiation 1.0 720 < th dose dependent rect. 19 8
495 42.88 temperature 20.0 10 > th dose dependent rect. 20 7
499 42.88 temperature 10.0 90 > th dose dependent rect. 23 20
505 42.90 temperature 15.0 720 > th dose independent rect. 15 16
511 42.91 temperature 25.0 90 < th dose independent rect. 23 7
512 42.91 precipitation 0.1 10 < th dose independent rect. 6 10
515 42.91 wind 9.0 10 < th dose independent rect. 16 14
516 42.91 humidity 50.0 30 > th dose independent rect. 16 14
517 42.91 radiation 10.0 10 < th dose independent rect. 16 14
518 42.91 radiation 1.0 90 < th dose independent rect. 23 20
524 42.91 precipitation 0.1 10 < th dose dependent rect. 6 10
533 42.92 radiation 40.0 720 < th dose independent rect. 15 8
534 42.92 temperature 10.0 10 > th dose independent rect. 6 10
536 42.92 atmosphere 1015.0 10 < th dose independent rect. 6 10
537 42.92 temperature 10.0 10 > th dose independent rect. 16 14
542 42.92 atmosphere 995.0 10 > th dose independent rect. 14 16
544 42.92 temperature 15.0 30 > th dose dependent rect. 3 3
546 42.93 humidity 70.0 720 > th dose independent rect. 19 4
553 42.93 temperature 10.0 270 > th dose dependent rect. 7 11
554 42.93 temperature 25.0 270 > th dose dependent rect. 7 11
556 42.93 temperature 25.0 270 > th dose dependent rect. 23 19
569 42.95 temperature 10.0 1440 > th dose independent rect. 7 10
573 42.95 temperature 10.0 1440 > th dose independent rect. 17 14
576 42.95 radiation 40.0 1440 < th dose independent rect. 17 14
580 42.95 precipitation 0.1 720 < th dose independent rect. 3 16
583 42.95 radiation 1.0 10 > th dose dependent rect. 6 1
590 42.95 precipitation 0.1 720 < th dose dependent rect. 3 16
601 42.96 radiation 40.0 720 < th dose independent rect. 15 16
607 42.96 temperature 25.0 270 > th dose dependent rect. 4 14
612 42.97 temperature 25.0 90 > th dose independent rect. 5 2
617 42.97 atmosphere 1015.0 720 < th dose independent rect. 7 8
644 42.99 temperature 25.0 90 > th dose independent sin 10 NA
645 42.99 wind 3.0 30 > th dose independent rect. 6 1
661 42.99 wind 1.0 90 > th dose independent rect. 5 22
676 43.00 atmosphere 1015.0 30 < th dose independent rect. 23 23
684 43.01 temperature 25.0 90 < th dose independent sin 10 NA
687 43.01 radiation 1.0 90 < th dose independent rect. 23 9
694 43.01 radiation 20.0 30 < th dose dependent rect. 6 1
702 43.02 temperature 20.0 30 > th dose independent rect. 3 3
705 43.02 radiation 1.0 90 < th dose independent rect. 3 5
719 43.02 radiation 1.0 90 < th dose dependent rect. 3 16
726 43.03 precipitation 0.1 720 < th dose independent rect. 15 8
731 43.03 radiation 1.0 30 < th dose independent rect. 23 23
735 43.03 precipitation 0.1 720 < th dose dependent rect. 15 8
744 43.04 wind 9.0 30 < th dose independent rect. 6 10
747 43.04 wind 1.0 90 > th dose independent rect. 5 18
761 43.05 radiation 1.0 720 > th dose independent rect. 7 4
762 43.05 temperature 15.0 30 > th dose independent rect. 23 7
763 43.05 temperature 10.0 1440 > th dose independent rect. 24 7
766 43.05 temperature 30.0 1440 < th dose independent rect. 24 7
770 43.05 humidity 50.0 1440 > th dose independent rect. 24 7
775 43.05 atmosphere 995.0 1440 > th dose independent rect. 24 7
776 43.05 radiation 40.0 1440 < th dose independent rect. 24 7
785 43.05 temperature 10.0 1440 > th dose independent rect. 7 17
788 43.05 humidity 80.0 30 > th dose independent rect. 6 17
789 43.05 atmosphere 995.0 30 > th dose independent rect. 12 18
790 43.05 atmosphere 1015.0 30 < th dose independent rect. 6 21
794 43.05 radiation 1.0 90 < th dose dependent rect. 3 5
799 43.06 temperature 15.0 4320 > th dose independent rect. 7 1
806 43.06 wind 1.0 10 > th dose independent rect. 6 10
808 43.06 precipitation 0.1 10 < th dose independent rect. 16 14
811 43.06 radiation 1.0 90 < th dose independent rect. 3 16
813 43.06 precipitation 0.1 30 < th dose independent rect. 6 17
827 43.06 precipitation 0.1 10 < th dose dependent rect. 16 14
828 43.06 precipitation 0.1 30 < th dose dependent rect. 6 17
829 43.06 radiation 1.0 90 < th dose dependent rect. 23 20
830 43.07 radiation 1.0 90 > th dose independent sin 3 NA
836 43.07 atmosphere 995.0 720 > th dose independent rect. 11 16
837 43.07 precipitation 0.1 30 < th dose independent rect. 6 21
839 43.07 temperature 25.0 720 > th dose dependent rect. 10 1
842 43.07 humidity 50.0 30 > th dose dependent rect. 3 3
849 43.07 precipitation 0.1 30 < th dose dependent rect. 6 21
853 43.08 radiation 1.0 30 > th dose independent rect. 6 10
856 43.08 temperature 30.0 10 < th dose independent rect. 16 14
865 43.08 humidity 50.0 30 > th dose dependent rect. 23 7
877 43.09 temperature 15.0 90 > th dose independent rect. 5 22
878 43.09 radiation 40.0 90 < th dose independent rect. 5 22
884 43.09 wind 9.0 30 < th dose dependent rect. 3 3
893 43.09 radiation 40.0 10 < th dose dependent rect. 14 16
896 43.10 wind 9.0 30 < th dose independent rect. 3 3
897 43.10 temperature 10.0 30 > th dose independent rect. 3 3
899 43.10 temperature 30.0 30 < th dose independent rect. 3 3
900 43.10 humidity 50.0 30 > th dose independent rect. 3 3
903 43.10 atmosphere 995.0 30 > th dose independent rect. 3 3
905 43.10 atmosphere 1010.0 30 < th dose independent rect. 3 3
907 43.10 radiation 20.0 30 < th dose independent rect. 3 3
912 43.10 wind 9.0 30 < th dose independent rect. 23 7
915 43.10 humidity 50.0 30 > th dose independent rect. 23 7
918 43.10 atmosphere 995.0 30 > th dose independent rect. 23 7
919 43.10 radiation 20.0 30 < th dose independent rect. 23 7
923 43.10 atmosphere 995.0 720 > th dose independent rect. 15 8
924 43.10 atmosphere 995.0 10 > th dose independent rect. 6 10
926 43.10 wind 9.0 720 < th dose independent rect. 15 16
928 43.10 temperature 10.0 30 > th dose independent rect. 6 17
930 43.10 atmosphere 1015.0 30 < th dose independent rect. 6 17
941 43.10 radiation 30.0 30 < th dose dependent rect. 3 3
965 43.11 radiation 1.0 90 < th dose independent rect. 3 2
985 43.11 temperature 15.0 720 > th dose independent rect. 7 4
987 43.11 atmosphere 995.0 720 > th dose independent rect. 7 8
990 43.11 wind 7.0 90 < th dose independent rect. 23 20
996 43.11 radiation 10.0 90 < th dose dependent rect. 3 2