Os04g0437300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : U box domain containing protein.
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Os04g0437300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : U box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 303.67 | 0.819 | 7.41 | -4.96 | 1.48 | 1.69 | 2.42 | -7.59 | -0.455 | 5.51 | 24.2 | 1416 | -- | -- |
| 313.49 | 0.825 | 7.23 | -3.39 | 1.48 | 1.73 | 2.33 | -- | -0.256 | 5.5 | 15.02 | 8565 | -- | -- |
| 313.98 | 0.825 | 7.41 | -4.97 | 1.73 | 1.75 | -- | -7.92 | -0.526 | 5.63 | 23.15 | 1875 | -- | -- |
| 326.91 | 0.842 | 7.23 | -3.37 | 1.49 | 1.69 | -- | -- | -0.262 | 5.53 | 15.55 | 8539 | -- | -- |
| 430.26 | 0.966 | 7.43 | -5.07 | -- | 1.89 | -- | -7.44 | -0.422 | -- | 23.8 | 2760 | -- | -- |
| 367.46 | 0.899 | 7.1 | -2.43 | 1.53 | -- | 2.37 | -- | 0.29 | 5.37 | -- | -- | -- | -- |
| 381.39 | 0.915 | 7.11 | -2.42 | 1.54 | -- | -- | -- | 0.279 | 5.36 | -- | -- | -- | -- |
| 441.5 | 0.979 | 7.26 | -3.36 | -- | 1.76 | -- | -- | -0.26 | -- | 16.12 | 8484 | -- | -- |
| 523.47 | 1.07 | 7.12 | -- | 1.41 | 0.521 | -- | -- | 0.366 | 5.47 | 28.51 | 8371 | -- | -- |
| 505.32 | 1.05 | 7.13 | -2.37 | -- | -- | -- | -- | 0.318 | -- | -- | -- | -- | -- |
| 536.02 | 1.08 | 7.05 | -- | 1.5 | -- | -- | -- | 0.549 | 5.42 | -- | -- | -- | -- |
| 620.91 | 1.16 | 7.08 | -- | -- | -1.56 | -- | -- | 0.535 | -- | 28.51 | 8371 | -- | -- |
| 653.44 | 1.19 | 7.07 | -- | -- | -- | -- | -- | 0.58 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 288.36 | temperature | 30 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 2 | 288.46 | temperature | 30 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 4 | 288.73 | temperature | 30 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 10 | 289.07 | temperature | 25 | 43200 | > th | dose dependent | rect. | 1 | 15 |
| 21 | 289.11 | temperature | 25 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 22 | 289.11 | temperature | 25 | 43200 | > th | dose dependent | rect. | 6 | 10 |
| 51 | 289.15 | temperature | 25 | 43200 | > th | dose dependent | sin | 2 | NA |
| 58 | 289.15 | temperature | 25 | 43200 | > th | dose dependent | rect. | 12 | 19 |
| 65 | 289.16 | temperature | 25 | 43200 | > th | dose dependent | rect. | 12 | 10 |
| 70 | 289.16 | temperature | 25 | 43200 | > th | dose dependent | rect. | 12 | 15 |
| 88 | 289.18 | temperature | 25 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 89 | 289.18 | temperature | 25 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 91 | 289.18 | temperature | 25 | 43200 | > th | dose dependent | rect. | 12 | 7 |
| 97 | 289.19 | temperature | 25 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 249 | 289.30 | temperature | 25 | 43200 | > th | dose dependent | no | NA | NA |
| 250 | 289.30 | temperature | 25 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 357 | 289.64 | temperature | 25 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 368 | 289.70 | temperature | 25 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 375 | 289.80 | temperature | 30 | 43200 | < th | dose independent | rect. | 14 | 15 |
| 379 | 289.81 | temperature | 30 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 387 | 289.82 | temperature | 30 | 43200 | < th | dose independent | rect. | 14 | 10 |
| 432 | 290.05 | temperature | 25 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 442 | 290.12 | temperature | 25 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 598 | 290.74 | temperature | 25 | 43200 | > th | dose independent | sin | 7 | NA |
| 602 | 290.77 | temperature | 25 | 43200 | < th | dose independent | sin | 7 | NA |
| 655 | 290.91 | temperature | 30 | 43200 | < th | dose independent | sin | 16 | NA |
| 717 | 291.05 | temperature | 30 | 43200 | > th | dose independent | sin | 15 | NA |
| 750 | 291.12 | temperature | 25 | 43200 | > th | dose independent | rect. | 16 | 19 |
| 756 | 291.14 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 772 | 291.18 | temperature | 30 | 43200 | < th | dose independent | rect. | 4 | 13 |