Os02g0539200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : U box domain containing protein.
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Os02g0539200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : U box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.77 | 0.401 | 2.82 | 0.15 | 0.0129 | 0.417 | 0.492 | -1.59 | 0.148 | 17.4 | 7.8 | 709 | -- | -- |
| 72.89 | 0.398 | 2.83 | 0.17 | 0.0146 | 0.78 | 0.476 | -- | 0.146 | 17.4 | 8.097 | 701 | -- | -- |
| 73.33 | 0.399 | 2.82 | 0.144 | 0.0224 | 0.423 | -- | -1.4 | 0.144 | 17.6 | 8.001 | 731 | -- | -- |
| 73.45 | 0.399 | 2.83 | 0.177 | 0.016 | 0.776 | -- | -- | 0.147 | 18 | 8.039 | 700 | -- | -- |
| 73.36 | 0.399 | 2.82 | 0.148 | -- | 0.419 | -- | -1.46 | 0.147 | -- | 8.1 | 731 | -- | -- |
| 75.86 | 0.408 | 2.84 | 0.0777 | 0.0225 | -- | 0.395 | -- | 0.107 | 17 | -- | -- | -- | -- |
| 75.84 | 0.408 | 2.84 | 0.0769 | 0.087 | -- | -- | -- | 0.109 | 21.6 | -- | -- | -- | -- |
| 73.48 | 0.399 | 2.83 | 0.169 | -- | 0.749 | -- | -- | 0.145 | -- | 8.1 | 700 | -- | -- |
| 73.76 | 0.4 | 2.84 | -- | 0.0745 | 0.744 | -- | -- | 0.12 | 19.6 | 10.52 | 705 | -- | -- |
| 76.29 | 0.408 | 2.84 | 0.0777 | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
| 76 | 0.408 | 2.84 | -- | 0.0872 | -- | -- | -- | 0.1 | 21.7 | -- | -- | -- | -- |
| 73.87 | 0.4 | 2.83 | -- | -- | 0.75 | -- | -- | 0.116 | -- | 10.52 | 692 | -- | -- |
| 76.45 | 0.408 | 2.84 | -- | -- | -- | -- | -- | 0.0998 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.18 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 2 | 66.30 | wind | 7.0 | 10 | > th | dose dependent | rect. | 21 | 7 |
| 3 | 66.32 | wind | 7.0 | 30 | > th | dose independent | rect. | 21 | 7 |
| 42 | 66.82 | wind | 9.0 | 30 | > th | dose independent | rect. | 21 | 5 |
| 61 | 66.82 | wind | 9.0 | 30 | > th | dose dependent | rect. | 21 | 5 |
| 105 | 66.99 | humidity | 80.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 175 | 67.23 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 187 | 67.26 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 198 | 67.39 | wind | 5.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 200 | 67.42 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 221 | 67.50 | wind | 9.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 222 | 67.54 | wind | 1.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 224 | 67.54 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 226 | 67.54 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 227 | 67.54 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 231 | 67.54 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 233 | 67.54 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 238 | 67.54 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 1 |
| 239 | 67.54 | temperature | 10.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 241 | 67.54 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 246 | 67.54 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 257 | 67.64 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 263 | 67.69 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 301 | 67.91 | wind | 3.0 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 312 | 67.94 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 315 | 68.04 | humidity | 90.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 316 | 68.06 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 317 | 68.08 | wind | 9.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 322 | 68.12 | wind | 7.0 | 30 | > th | dose independent | rect. | 21 | 1 |
| 326 | 68.12 | wind | 7.0 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 356 | 68.18 | wind | 9.0 | 90 | > th | dose dependent | rect. | 18 | 4 |
| 375 | 68.27 | wind | 1.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 566 | 68.64 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 21 | 23 |
| 567 | 68.64 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 572 | 68.72 | humidity | 80.0 | 30 | > th | dose independent | rect. | 17 | 4 |
| 600 | 68.96 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 605 | 69.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 608 | 69.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 612 | 69.00 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 618 | 69.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 619 | 69.00 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 639 | 69.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 644 | 69.02 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 652 | 69.07 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 656 | 69.10 | wind | 9.0 | 30 | < th | dose independent | sin | 10 | NA |
| 695 | 69.42 | wind | 9.0 | 30 | > th | dose independent | sin | 10 | NA |
| 842 | 70.49 | wind | 7.0 | 30 | > th | dose dependent | sin | 10 | NA |
| 876 | 70.63 | humidity | 80.0 | 30 | > th | dose independent | rect. | 9 | 12 |
| 896 | 70.69 | wind | 5.0 | 90 | < th | dose independent | rect. | 21 | 12 |
| 961 | 70.83 | wind | 9.0 | 720 | < th | dose independent | rect. | 11 | 22 |
| 992 | 70.91 | wind | 9.0 | 720 | < th | dose independent | rect. | 17 | 16 |