Os12g0570000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11).
FiT-DB / Search/ Help/ Sample detail
|
Os12g0570000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.17 | 0.236 | 13.6 | 0.579 | 0.886 | -0.603 | 0.185 | -0.189 | 0.484 | 2.69 | 23 | 234 | -- | -- |
| 25.21 | 0.234 | 13.6 | 0.566 | 0.883 | -0.582 | 0.157 | -- | 0.483 | 2.65 | 22.9 | 217 | -- | -- |
| 25.28 | 0.234 | 13.6 | 0.575 | 0.889 | -0.597 | -- | -0.118 | 0.484 | 2.71 | 22.9 | 230 | -- | -- |
| 25.28 | 0.234 | 13.6 | 0.556 | 0.886 | -0.575 | -- | -- | 0.48 | 2.68 | 22.92 | 211 | -- | -- |
| 62.83 | 0.369 | 13.6 | 0.547 | -- | -0.71 | -- | -0.553 | 0.463 | -- | 22.7 | 2508 | -- | -- |
| 28.97 | 0.252 | 13.6 | 0.689 | 0.826 | -- | 0.166 | -- | 0.559 | 2.68 | -- | -- | -- | -- |
| 29.07 | 0.252 | 13.6 | 0.685 | 0.827 | -- | -- | -- | 0.558 | 2.69 | -- | -- | -- | -- |
| 61.99 | 0.367 | 13.6 | 0.456 | -- | -0.611 | -- | -- | 0.414 | -- | 26.28 | 2520 | -- | -- |
| 26.63 | 0.24 | 13.6 | -- | 0.818 | -0.644 | -- | -- | 0.337 | 2.71 | 21.2 | 47520 | -- | -- |
| 68.9 | 0.388 | 13.6 | 0.72 | -- | -- | -- | -- | 0.579 | -- | -- | -- | -- | -- |
| 41.44 | 0.301 | 13.6 | -- | 0.84 | -- | -- | -- | 0.481 | 2.7 | -- | -- | -- | -- |
| 65.52 | 0.377 | 13.6 | -- | -- | -0.681 | -- | -- | 0.334 | -- | 22.19 | 47520 | -- | -- |
| 82.59 | 0.424 | 13.6 | -- | -- | -- | -- | -- | 0.499 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.42 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 9 |
| 3 | 22.73 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 6 | 22.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 9 | 22.97 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 21 |
| 15 | 23.10 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 21 |
| 19 | 23.25 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 21 |
| 38 | 23.46 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 18 |
| 48 | 23.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 87 | 23.93 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 12 |
| 89 | 23.94 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 10 |
| 91 | 23.95 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 97 | 23.96 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 111 | 23.99 | wind | 1 | 14400 | < th | dose dependent | sin | 8 | NA |
| 117 | 24.00 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 123 | 24.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 18 |
| 124 | 24.01 | wind | 1 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 131 | 24.03 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 137 | 24.04 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 159 | 24.08 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 162 | 24.08 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 173 | 24.10 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 176 | 24.10 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 209 | 24.14 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 210 | 24.14 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 218 | 24.14 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 227 | 24.15 | wind | 1 | 14400 | > th | dose independent | sin | 7 | NA |
| 235 | 24.16 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 252 | 24.18 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 8 |
| 261 | 24.19 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 10 |
| 280 | 24.20 | wind | 1 | 14400 | < th | dose independent | sin | 8 | NA |
| 282 | 24.20 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 303 | 24.21 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 313 | 24.22 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 351 | 24.25 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 412 | 24.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 414 | 24.29 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 452 | 24.31 | temperature | 20 | 90 | < th | dose independent | sin | 11 | NA |
| 500 | 24.33 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 504 | 24.34 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 575 | 24.37 | temperature | 20 | 90 | > th | dose independent | sin | 10 | NA |
| 663 | 24.41 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 738 | 24.45 | temperature | 20 | 10 | > th | dose independent | sin | 9 | NA |
| 777 | 24.47 | temperature | 20 | 10 | < th | dose independent | sin | 9 | NA |
| 865 | 24.50 | wind | 1 | 14400 | < th | dose dependent | rect. | 12 | 21 |
| 974 | 24.54 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 979 | 24.55 | humidity | 60 | 43200 | < th | dose independent | rect. | 2 | 8 |