Os05g0476700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Arm repeat protein.
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Os05g0476700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Arm repeat protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.57 | 0.454 | 9.72 | 0.054 | 1.81 | 0.816 | -0.398 | -0.419 | 0.0374 | 9.29 | 76 | 1208 | -- | -- |
| 93.76 | 0.451 | 9.71 | 0.0828 | 1.81 | 0.79 | -0.368 | -- | 0.0411 | 9.29 | 76 | 1202 | -- | -- |
| 94.12 | 0.452 | 9.71 | 0.0516 | 1.82 | 0.809 | -- | -0.306 | 0.0356 | 9.28 | 75.91 | 1201 | -- | -- |
| 94.2 | 0.452 | 9.71 | 0.0689 | 1.82 | 0.789 | -- | -- | 0.0426 | 9.28 | 76 | 1199 | -- | -- |
| 265.13 | 0.763 | 9.77 | 0.193 | -- | 0.705 | -- | -1.15 | 0.0304 | -- | 86 | 1489 | -- | -- |
| 107.26 | 0.486 | 9.72 | 0.23 | 1.73 | -- | -0.452 | -- | -0.00515 | 9.04 | -- | -- | -- | -- |
| 107.96 | 0.487 | 9.72 | 0.214 | 1.73 | -- | -- | -- | -0.00561 | 9.03 | -- | -- | -- | -- |
| 267.56 | 0.765 | 9.76 | 0.196 | -- | 0.682 | -- | -- | 0.0333 | -- | 84.92 | 1489 | -- | -- |
| 94.33 | 0.452 | 9.71 | -- | 1.82 | 0.801 | -- | -- | 0.0355 | 9.29 | 76 | 1200 | -- | -- |
| 279.95 | 0.782 | 9.77 | 0.211 | -- | -- | -- | -- | 0.00486 | -- | -- | -- | -- | -- |
| 109.17 | 0.489 | 9.73 | -- | 1.73 | -- | -- | -- | -0.0295 | 9.02 | -- | -- | -- | -- |
| 268.57 | 0.766 | 9.77 | -- | -- | 0.694 | -- | -- | 0.0143 | -- | 84 | 1488 | -- | -- |
| 281.13 | 0.783 | 9.78 | -- | -- | -- | -- | -- | -0.0186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.74 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 2 | 88.41 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 3 | 89.54 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 11 | 17 |
| 11 | 90.26 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 16 |
| 13 | 90.73 | radiation | 1.0 | 90 | < th | dose independent | rect. | 11 | 17 |
| 31 | 91.89 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 35 | 92.16 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 19 | 9 |
| 41 | 92.62 | wind | 5.0 | 30 | < th | dose dependent | rect. | 4 | 4 |
| 44 | 92.82 | wind | 5.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 49 | 92.86 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 52 | 92.88 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 16 |
| 53 | 92.90 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 55 | 92.98 | humidity | 60.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 61 | 93.13 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 8 | 20 |
| 62 | 93.14 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 16 | 12 |
| 64 | 93.18 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 71 | 93.30 | wind | 7.0 | 30 | < th | dose independent | rect. | 19 | 9 |
| 92 | 93.60 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 94 | 93.63 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 102 | 93.71 | radiation | 1.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 110 | 93.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 125 | 93.84 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 20 |
| 127 | 93.85 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 134 | 93.91 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 142 | 94.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 143 | 94.00 | temperature | 30.0 | 30 | < th | dose independent | rect. | 19 | 9 |
| 144 | 94.00 | humidity | 50.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 146 | 94.00 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 147 | 94.00 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 9 |
| 152 | 94.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 15 |
| 154 | 94.00 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 15 |
| 155 | 94.00 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 9 |
| 162 | 94.03 | wind | 3.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 163 | 94.03 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 169 | 94.06 | wind | 9.0 | 30 | < th | dose dependent | rect. | 19 | 9 |
| 176 | 94.12 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 15 |
| 178 | 94.12 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 15 |
| 189 | 94.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 192 | 94.20 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 3 |
| 194 | 94.20 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 210 | 94.31 | temperature | 15.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 216 | 94.34 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 218 | 94.34 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 219 | 94.34 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 221 | 94.34 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 222 | 94.34 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 223 | 94.34 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 254 | 94.42 | radiation | 1.0 | 10 | < th | dose independent | rect. | 19 | 23 |
| 269 | 94.48 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 272 | 94.50 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 299 | 94.63 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 19 | 19 |
| 302 | 94.65 | radiation | 1.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 329 | 94.78 | radiation | 1.0 | 90 | < th | dose independent | sin | 13 | NA |
| 330 | 94.78 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 340 | 94.84 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 19 | 9 |
| 342 | 94.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 15 |
| 345 | 94.84 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 19 | 9 |
| 346 | 94.85 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 347 | 94.85 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 351 | 94.85 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 362 | 94.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 364 | 94.91 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 365 | 94.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 368 | 94.91 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 369 | 94.91 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 374 | 94.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 410 | 95.01 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 421 | 95.07 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 422 | 95.07 | humidity | 60.0 | 90 | > th | dose independent | rect. | 12 | 16 |
| 425 | 95.08 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 15 |
| 426 | 95.08 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 436 | 95.11 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 7 |
| 446 | 95.12 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 452 | 95.13 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 459 | 95.13 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 14 | 5 |
| 467 | 95.16 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 14 | 17 |
| 484 | 95.17 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 16 |
| 486 | 95.18 | radiation | 1.0 | 10 | < th | dose independent | sin | 11 | NA |
| 500 | 95.18 | humidity | 70.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 535 | 95.23 | humidity | 60.0 | 1440 | > th | dose independent | sin | 15 | NA |
| 538 | 95.23 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 611 | 95.31 | humidity | 60.0 | 1440 | < th | dose independent | sin | 15 | NA |
| 695 | 95.37 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 732 | 95.43 | radiation | 1.0 | 10 | > th | dose independent | sin | 11 | NA |
| 765 | 95.44 | radiation | 1.0 | 10 | < th | dose independent | rect. | 19 | 19 |
| 806 | 95.47 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 807 | 95.47 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 823 | 95.48 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 19 | 17 |
| 872 | 95.55 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 926 | 95.59 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 947 | 95.60 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 20 |
| 949 | 95.60 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 20 |
| 966 | 95.61 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 977 | 95.62 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 8 | 20 |
| 978 | 95.62 | wind | 5.0 | 43200 | < th | dose independent | rect. | 21 | 22 |