Os06g0726900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Arm repeat containing protein.
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Os06g0726900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Arm repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.07 | 0.404 | 2.99 | -0.0663 | 0.112 | 2.27 | -0.0204 | -5.94 | -0.0111 | 10.1 | 5 | 1 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 110.4 | 0.493 | 3 | -0.157 | 0.0355 | -- | 0.366 | -- | -0.0502 | 11.3 | -- | -- | -- | -- |
| 110.86 | 0.493 | 3 | -0.143 | 0.0597 | -- | -- | -- | -0.05 | 7.72 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 111.05 | 0.492 | 3 | -0.142 | -- | -- | -- | -- | -0.0492 | -- | -- | -- | -- | -- |
| 111.4 | 0.494 | 3 | -- | 0.0587 | -- | -- | -- | -0.0341 | 7.89 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 111.59 | 0.493 | 3 | -- | -- | -- | -- | -- | -0.0334 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.07 | atmosphere | 1015 | 10 | > th | dose independent | sin | 7 | NA |
| 97 | 74.07 | atmosphere | 1015 | 10 | > th | dose independent | no | NA | NA |
| 101 | 74.07 | atmosphere | 1015 | 10 | < th | dose independent | sin | 13 | NA |
| 107 | 74.07 | atmosphere | 1015 | 10 | < th | dose independent | sin | 1 | NA |
| 113 | 74.07 | atmosphere | 1015 | 10 | < th | dose independent | no | NA | NA |
| 117 | 74.07 | atmosphere | 1015 | 270 | > th | dose independent | rect. | 20 | 1 |
| 124 | 74.07 | atmosphere | 1015 | 10 | > th | dose independent | rect. | 23 | 1 |