Os08g0415600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : U box domain containing protein.
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Os08g0415600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : U box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.69 | 0.545 | 8.41 | -0.0487 | 0.807 | -2.8 | 0.39 | -3.87 | -0.916 | 10.6 | 19.4 | 6200 | -- | -- |
| 152.73 | 0.576 | 8.29 | 0.108 | 0.728 | -1.89 | 0.186 | -- | -0.936 | 10.2 | 19.2 | 6254 | -- | -- |
| 135.23 | 0.542 | 8.41 | -0.0155 | 0.797 | -2.82 | -- | -3.89 | -0.912 | 10.6 | 19.38 | 6294 | -- | -- |
| 148.99 | 0.569 | 8.26 | 0.229 | 0.814 | -1.67 | -- | -- | -0.829 | 10.6 | 19.87 | 6191 | -- | -- |
| 171.68 | 0.61 | 8.46 | 0.0592 | -- | -3.47 | -- | -4.98 | -0.91 | -- | 18.91 | 6684 | -- | -- |
| 193.68 | 0.652 | 8.36 | -0.931 | 0.836 | -- | 0.469 | -- | -1.31 | 10.7 | -- | -- | -- | -- |
| 194.6 | 0.653 | 8.36 | -0.912 | 0.834 | -- | -- | -- | -1.31 | 10.6 | -- | -- | -- | -- |
| 185.88 | 0.635 | 8.27 | 0.178 | -- | -1.6 | -- | -- | -0.776 | -- | 21.05 | 6530 | -- | -- |
| 146.8 | 0.564 | 8.25 | -- | 0.814 | -1.42 | -- | -- | -0.791 | 10.5 | 21.8 | 6112 | -- | -- |
| 237.44 | 0.72 | 8.39 | -0.928 | -- | -- | -- | -- | -1.31 | -- | -- | -- | -- | -- |
| 216.53 | 0.688 | 8.34 | -- | 0.84 | -- | -- | -- | -1.21 | 10.7 | -- | -- | -- | -- |
| 172.35 | 0.611 | 8.3 | -- | -- | -1.56 | -- | -- | -0.756 | -- | 21.7 | 2310 | -- | -- |
| 260.16 | 0.753 | 8.36 | -- | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 33 | 136.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 68 | 137.61 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 77 | 137.69 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 79 | 137.69 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 98 | 137.94 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 291 | 139.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 415 | 139.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 465 | 140.12 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 702 | 141.37 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 14 |
| 726 | 141.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 782 | 141.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 817 | 141.85 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 819 | 141.86 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 847 | 142.03 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 895 | 142.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 921 | 142.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 925 | 142.30 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 977 | 142.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 19 |