BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0232600 Os03g0232600|AK068218
(459 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0232600 U box domain containing protein 783 0.0
Os04g0437300 U box domain containing protein 96 4e-20
Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 94 2e-19
Os03g0275900 Similar to Spotted leaf protein 11 (Spotted le... 91 2e-18
Os08g0481200 Similar to Arm repeat containing protein 84 2e-16
Os12g0570000 Similar to Spotted leaf protein 11 (Spotted le... 84 2e-16
Os02g0732200 U box domain containing protein 83 4e-16
Os04g0589700 U box domain containing protein 83 5e-16
Os02g0540700 Similar to Arm repeat-containing protein 81 2e-15
Os02g0488701 U box domain containing protein 79 5e-15
Os01g0884400 U box domain containing protein 79 9e-15
Os02g0548700 U box domain containing protein 77 2e-14
Os06g0480000 U box domain containing protein 77 3e-14
Os02g0690600 U box domain containing protein 77 3e-14
Os02g0705600 Armadillo-like helical domain containing protein 77 3e-14
Os12g0161100 U box domain containing protein 76 5e-14
Os02g0234300 U box domain containing protein 76 6e-14
Os04g0417400 U box domain containing protein 74 2e-13
Os04g0418500 U box domain containing protein 74 2e-13
Os01g0901000 Similar to Arm repeat-containing protein 74 2e-13
Os01g0865700 U box domain containing protein 74 2e-13
Os08g0110500 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 74 3e-13
Os09g0378700 U box domain containing protein 73 4e-13
Os06g0248500 U box domain containing protein 73 6e-13
Os04g0489800 U box domain containing protein 72 1e-12
Os08g0415600 U box domain containing protein 71 2e-12
Os04g0686000 U box domain containing protein 71 2e-12
Os01g0823900 Arm repeat protein 71 2e-12
Os05g0476700 Similar to Arm repeat protein 70 3e-12
Os05g0439400 Similar to Arm repeat containing protein 70 3e-12
Os02g0539200 U box domain containing protein 70 4e-12
Os04g0348400 U box domain containing protein 69 5e-12
>Os03g0232600 U box domain containing protein
Length = 459
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/459 (86%), Positives = 397/459 (86%)
Query: 1 MPQYQELPCGGQVLDIDTALKDGILGGGPELGDAAAGDGGKQPVELRKMMXXXXXXXXXX 60
MPQYQELPCGGQVLDIDTALKDGILGGGPELGDAAAGDGGKQPVELRKMM
Sbjct: 1 MPQYQELPCGGQVLDIDTALKDGILGGGPELGDAAAGDGGKQPVELRKMMDELDAAGDGG 60
Query: 61 XXXXVPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIP 120
VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIP
Sbjct: 61 GDEAVPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIP 120
Query: 121 NTTLRQLIAAWFSRRYTRFKKRSADFHGRAAELVHALRGTAVPKRQPLKGQXXXXXXXXX 180
NTTLRQLIAAWFSRRYTRFKKRSADFHGRAAELVHALRGTAVPKRQPLKGQ
Sbjct: 121 NTTLRQLIAAWFSRRYTRFKKRSADFHGRAAELVHALRGTAVPKRQPLKGQARVAALREL 180
Query: 181 XXXXXXHQSVTKAIAEAGGVGLLTSLLGPFTSHAVGSEAVAILVSGVPLDADAKAALMQP 240
HQSVTKAIAEAGGVGLLTSLLGPFTSHAVGSEAVAILVSGVPLDADAKAALMQP
Sbjct: 181 RSLAAAHQSVTKAIAEAGGVGLLTSLLGPFTSHAVGSEAVAILVSGVPLDADAKAALMQP 240
Query: 241 AKVSLLVDMLNEGAVDTKINCVRLIRILMEEKGFRPDTVASLSLLVGVMRLVRDKRHPDG 300
AKVSLLVDMLNEGAVDTKINCVRLIRILMEEKGFRPDTVASLSLLVGVMRLVRDKRHPDG
Sbjct: 241 AKVSLLVDMLNEGAVDTKINCVRLIRILMEEKGFRPDTVASLSLLVGVMRLVRDKRHPDG 300
Query: 301 VAAGLELLNSICAVHKPARSLIVSIGAXXXXXXXXXXXXXXXXXXALDILDALAAVPEGR 360
VAAGLELLNSICAVHKPARSLIVSIGA ALDILDALAAVPEGR
Sbjct: 301 VAAGLELLNSICAVHKPARSLIVSIGAVPQLVELLPELPTECVEPALDILDALAAVPEGR 360
Query: 361 IALKDCPRTITNAVRLLMRVSEACTRRALSMLWVVCRMAPEECXXXXXXXXXXXXXXXVI 420
IALKDCPRTITNAVRLLMRVSEACTRRALSMLWVVCRMAPEEC VI
Sbjct: 361 IALKDCPRTITNAVRLLMRVSEACTRRALSMLWVVCRMAPEECAPAALDAGLGAKLLLVI 420
Query: 421 QSGCGPELKQQASELLKLCTMNCTSTVFISKCKLTKTIQ 459
QSGCGPELKQQASELLKLCTMNCTSTVFISKCKLTKTIQ
Sbjct: 421 QSGCGPELKQQASELLKLCTMNCTSTVFISKCKLTKTIQ 459
>Os04g0437300 U box domain containing protein
Length = 426
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTP-IPNTT 123
+P +F CPISL+ DPVTLCTGQTY+ I RWLA GHRTCP TMQ L D T +PN T
Sbjct: 3 IPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLGDATALVPNRT 62
Query: 124 LRQLIAAWFS 133
LR LI W S
Sbjct: 63 LRHLIERWLS 72
>Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 611
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 30/352 (8%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
+P F CPISLE M DPV + +GQTYE + I +WL GH+TCP T Q L + PN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 125 RQLIAAW---------FSRRYTRFKK--RSADF-HGRAAELVHALRGTAVPKRQPLKGQX 172
+ LI+ W +++ +R KK +S+D+ H L++ LR +++ G+
Sbjct: 288 KSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEI 347
Query: 173 XXXXXXXXXXXXXXHQSVTKAIAEAGGVGLLTSLLGPFTSHAVGSEAVAILVSGVPLDAD 232
IAEAG + LL +LL +S E + + + +
Sbjct: 348 RLLAKRNVNNRI--------CIAEAGAIPLLVNLLS--SSDPRTQEHAVTALLNLSIHEN 397
Query: 233 AKAALMQPAKVSLLVDMLNEGAVDTKINCVRLIRIL--MEEKGFRPDTVASLSLLVGVMR 290
KA+++ + +V++L G+++T+ N + L ++E T+ + + ++
Sbjct: 398 NKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKV---TIGAAGAIPPLIN 454
Query: 291 LVRDKRHPDGVAAGLELLNSICAVHKPARSLIVSIGAXXXXXXXXXXXXXXXXXXALDIL 350
L+ D P G + ++C +++ + V G AL +L
Sbjct: 455 LLCDGS-PRGKKDAATAIFNLC-IYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLL 512
Query: 351 DALAAVPEGRIALKDCPRTITNAVRLLMRVSEACTRRALSMLWVVCRMAPEE 402
LA PEG+I + I V ++ S A ++LW++C E+
Sbjct: 513 SILAGNPEGKIVIARS-EPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQ 563
>Os03g0275900 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 726
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 88/200 (44%), Gaps = 5/200 (2%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
VP F CPISL+ M DPV + TGQTYE I RWL GH TCP T Q+L + + PN L
Sbjct: 294 VPDDFRCPISLDLMKDPVIVATGQTYERGCIERWLEAGHDTCPKTQQKLPNKSLTPNYVL 353
Query: 125 RQLIAAWFSRRYTRFKKRSADFHGRAAELVHALRGTAVPKRQPLKGQXXXXXXXXXXXXX 184
R LIA W KR+A H A A V Q L Q
Sbjct: 354 RSLIAQWCEANGMEPPKRAAQHHNAPASCTAAEHSNVVELLQKLLSQNLEDQREAAGMLR 413
Query: 185 XXHQSVTKA---IAEAGGVGLLTSLLGPFTSHAVGSEAVAILVSGVPLDADAKAALMQPA 241
+ + I +AG + +L SLL + E V + + + + KA ++
Sbjct: 414 QLAKRSPENRACIGDAGAIPILVSLLS--ITDVSTQEHVVTALLNLSIYEENKARIITSG 471
Query: 242 KVSLLVDMLNEGAVDTKINC 261
V +V +L G+++ + N
Sbjct: 472 AVPGVVHVLKRGSMEARENS 491
>Os08g0481200 Similar to Arm repeat containing protein
Length = 642
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
+P F+CPI+L M DPV + TGQTYE +I +WL G RTCP T Q L ++ PN L
Sbjct: 269 IPNDFLCPITLAIMRDPVIVATGQTYERRSIQKWLDSGERTCPKTRQRLSHMSLAPNYAL 328
Query: 125 RQLIAAWFSRRYTRFKKRS-------ADFHGRAAELVHAL 157
+ LI W + +KR D H R AE + +L
Sbjct: 329 KNLILEWCDKNKVELQKREPEPVAEQDDEHQRGAEDIPSL 368
>Os12g0570000 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 637
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 47/79 (59%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
+P F CPISLE M DPV + TGQTYE A I +W+A GH TCPTT Q++ PN L
Sbjct: 216 IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVL 275
Query: 125 RQLIAAWFSRRYTRFKKRS 143
R LI+ W KRS
Sbjct: 276 RSLISQWCETNGMEPPKRS 294
>Os02g0732200 U box domain containing protein
Length = 637
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 44/67 (65%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
+P F CPISLE M DPV + TGQTYE A I RW+ G+RTCP T +L ++T PN L
Sbjct: 262 IPEDFRCPISLELMRDPVIVSTGQTYERAFIQRWIDCGNRTCPKTQLKLQNITLTPNYVL 321
Query: 125 RQLIAAW 131
R LI W
Sbjct: 322 RSLILQW 328
>Os04g0589700 U box domain containing protein
Length = 421
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 159/363 (43%), Gaps = 33/363 (9%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRW-LALGHRTCPTTMQELWDVTPIPNTTL 124
P +F+CPIS+E M DPVT+ TG TY+ +I RW G TCP TMQ L PN TL
Sbjct: 6 PPLFLCPISMELMEDPVTVATGVTYDRRSIERWFFKYGKTTCPATMQRLASFDFTPNHTL 65
Query: 125 RQLIAAWFSRRYTRFKKRSADFHG--RAAELVHALRGTAVP------KRQPLKGQXXXXX 176
+++I++W R + +A ++ +A+ +P + P K
Sbjct: 66 KRVISSWLDRASSSSSPSTAGSPATTSSSSSSNAMERERLPSVLAGIEETPFKA----TA 121
Query: 177 XXXXXXXXXXHQSVTKAIAEAGGVGLLTSLL----------GPFTSHAVGSEAVAILVSG 226
++ + GG+ +L ++ G F++ EA A+L +
Sbjct: 122 LKNLKSCMAGDEAAREDFVACGGIQVLGRVMTQALEESSAGGDFSAFRTCEEAAAVLAT- 180
Query: 227 VPLDADAKAA-LMQPAKVSLLVDMLNEGAVDTKINCVRLIRILMEEKGFRPDTVASL--- 282
+PL DA L++P + + ++ G+ + +++ + +I + + D A +
Sbjct: 181 LPLSDDASVELLLKPECIRPVSVLVQRGSAEARLHAMSMISKI--SRASVRDWTAEVDVD 238
Query: 283 SLLVGVMRLVRDKRHPDGVAAGLELLNSICAVHKPA--RSLIVSIGAXXXXXXXXXXXXX 340
++ ++ L+ D + L++L + A + R+ V +GA
Sbjct: 239 DMVKALLELLSDGASAKLSSRALDVLLDVTARYSRGARRAKAVELGAVRVLAELLLDADR 298
Query: 341 XXXXXALDILDALAAVPEGRIALKDCPRTITNAVRLLMRVSEACTRRALSMLWVV-CRMA 399
+L +L + PEGR+A + + R ++RVS TR A+++LW+V C A
Sbjct: 299 HVAERSLLLLKRMCKCPEGRLAFAEHGLAVAAVARAVLRVSGLATRLAVNVLWLVACAPA 358
Query: 400 PEE 402
P E
Sbjct: 359 PAE 361
>Os02g0540700 Similar to Arm repeat-containing protein
Length = 505
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 45/67 (67%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
VP F CPISL+ M PV+LCTG TY+ A+I RW+ G+ TCP TM L +PN TL
Sbjct: 75 VPTFFRCPISLDVMRSPVSLCTGVTYDRASIQRWIDSGNTTCPATMLPLPSTDLVPNLTL 134
Query: 125 RQLIAAW 131
R+LIA W
Sbjct: 135 RRLIALW 141
>Os02g0488701 U box domain containing protein
Length = 423
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 43/67 (64%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
VP F+CPIS E M DPV L +GQTY+ I WL+ G+RTCP T Q L + IPN +
Sbjct: 39 VPEQFLCPISSEIMRDPVVLASGQTYDRRFIQEWLSAGNRTCPQTQQVLSNTILIPNHLV 98
Query: 125 RQLIAAW 131
R +IA W
Sbjct: 99 RSMIAQW 105
>Os01g0884400 U box domain containing protein
Length = 796
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 42/67 (62%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
+PA F CP+SLE M DPV + +GQTYE I +W LG+ CP T Q L IPN T+
Sbjct: 224 IPADFCCPLSLELMSDPVIVASGQTYEHVFIRKWFDLGYNICPKTRQILGHTKLIPNFTV 283
Query: 125 RQLIAAW 131
+QLI W
Sbjct: 284 KQLIENW 290
>Os02g0548700 U box domain containing protein
Length = 417
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQEL-WDVTPIPNTT 123
VP F CPISLE M DPVT+ TGQTY+ A+I W+A G+ TCP T L T IPN T
Sbjct: 18 VPWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCPVTRSPLDRAFTLIPNHT 77
Query: 124 LRQLIAAW 131
LR+LI W
Sbjct: 78 LRRLIQDW 85
>Os06g0480000 U box domain containing protein
Length = 761
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
P F CP+S++ M DPV + +GQTYE NI +W + G+ CP T +L + T PNT +
Sbjct: 270 TPPEFCCPLSMKLMYDPVIIASGQTYERENIEKWFSEGYDICPRTQLKLENFTITPNTCM 329
Query: 125 RQLIAAWFSRRYTRFKKRSADFHGRAAELVHAL 157
+ +I W F FH + +H +
Sbjct: 330 KAVICNWCKDNELEFTSLPEQFHSYSVSSLHNI 362
>Os02g0690600 U box domain containing protein
Length = 425
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWL-ALGHRTCPTTMQELWDVTPIPNTTL 124
P +F+CPIS+E M DPVT+ TG TY+ +I WL G TCP TMQ L + PN TL
Sbjct: 8 PQLFLCPISMELMEDPVTVSTGVTYDRRSIEEWLFVYGRTTCPATMQPLSNFDLTPNHTL 67
Query: 125 RQLIAAWFSR 134
+++I++W R
Sbjct: 68 KRVISSWLDR 77
>Os02g0705600 Armadillo-like helical domain containing protein
Length = 770
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTLR 125
PA F CPIS + M DPV + +GQTYE NI RW G+ TCP T +L + IPNT +R
Sbjct: 271 PAEFCCPISTKLMRDPVIITSGQTYERENIERWFREGYDTCPRTHIKLENFAMIPNTCMR 330
Query: 126 QLIAAW 131
LI W
Sbjct: 331 DLIFNW 336
>Os12g0161100 U box domain containing protein
Length = 437
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 44/74 (59%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTLR 125
P F+CPISL+PM DPVT TG +Y+ I RWLA GH +CP T L PN TLR
Sbjct: 6 PQHFMCPISLQPMQDPVTSPTGISYDRRAIHRWLAAGHSSCPVTGHPLSLSDLTPNLTLR 65
Query: 126 QLIAAWFSRRYTRF 139
+LI +W T F
Sbjct: 66 RLIHSWHHSTTTPF 79
>Os02g0234300 U box domain containing protein
Length = 581
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 42/67 (62%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
VP F CPISL+ M DPV TGQTY+ +I +W+ GH TCP + Q L D +PN L
Sbjct: 150 VPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRAL 209
Query: 125 RQLIAAW 131
R LI+ W
Sbjct: 210 RSLISQW 216
>Os04g0417400 U box domain containing protein
Length = 451
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 67 AVFICPISLEPMVDPVTLCTGQTYESANISRWLAL-GHRTCPTTMQEL--WDVTPIPNTT 123
+ F+CPISLE M DPVTL TG TY+ +I RW+ GH CP T Q L D P PN T
Sbjct: 17 SYFVCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHGECPVTKQRLAPADREPTPNHT 76
Query: 124 LRQLIAAW 131
LR+LI W
Sbjct: 77 LRRLIQGW 84
>Os04g0418500 U box domain containing protein
Length = 451
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
+P+ F CPISL+ M PV+LCTG TY+ A+I RWL G+ TCP TM L +PN TL
Sbjct: 37 IPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTL 96
Query: 125 R 125
R
Sbjct: 97 R 97
>Os01g0901000 Similar to Arm repeat-containing protein
Length = 800
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTLR 125
P CPISL+ M DPV + +GQTYE I +W GH TCP T Q+L ++ PN ++
Sbjct: 294 PEELRCPISLQLMYDPVIISSGQTYERVCIEKWFNDGHSTCPKTQQQLSHLSLTPNYCVK 353
Query: 126 QLIAAW 131
LIA+W
Sbjct: 354 ALIASW 359
>Os01g0865700 U box domain containing protein
Length = 404
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLAL--GHRTCPTTMQELWD-VTPIPN 121
VP+ F+CPISL+ M DPVTL TG +Y+ A I+RWLA RTCP T Q L + PN
Sbjct: 8 VPSYFVCPISLQLMRDPVTLPTGISYDRAAIARWLAAPGARRTCPVTRQPLEHGLELTPN 67
Query: 122 TTLRQLIAAW 131
TLR+LI +W
Sbjct: 68 HTLRRLIQSW 77
>Os08g0110500 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 824
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 41/75 (54%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
+PA F CP+SLE M DPV + +GQTYE I WL G CP T Q L IPN T+
Sbjct: 229 IPADFCCPLSLELMSDPVIVASGQTYERVYIKLWLDEGFTICPKTRQRLGHSNLIPNYTV 288
Query: 125 RQLIAAWFSRRYTRF 139
+ LIA W R
Sbjct: 289 KALIANWCESHNIRL 303
>Os09g0378700 U box domain containing protein
Length = 712
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTLR 125
P CPI+L+ M DPVT+ TGQTY+ A+I+RW+ G RTCP T + L +PNT LR
Sbjct: 291 PEALQCPITLDLMTDPVTVSTGQTYDRASITRWMKAGCRTCPVTGERLSTADLVPNTVLR 350
Query: 126 QLI 128
+I
Sbjct: 351 GII 353
>Os06g0248500 U box domain containing protein
Length = 449
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTL 124
VPA F+CPISLE M DPVT TG TY+ ++ WLA GH TCP T + + +PN
Sbjct: 38 VPANFVCPISLEMMRDPVTAPTGITYDRESVEGWLARGHDTCPVTGRPVRLADLVPNHAT 97
Query: 125 RQLIAAW 131
R++I W
Sbjct: 98 RRMIQDW 104
>Os04g0489800 U box domain containing protein
Length = 800
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTLR 125
P CPISL+ M DPV + +GQTYE A I +W + G+ TCP T EL ++ PN ++
Sbjct: 280 PEELRCPISLQLMHDPVIIASGQTYERACIEKWFSSGNTTCPKTRNELSQLSMTPNYCIK 339
Query: 126 QLIAAW 131
LIA+W
Sbjct: 340 GLIASW 345
>Os08g0415600 U box domain containing protein
Length = 676
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTLR 125
P CPI+LE M DPVTL TGQTY+ A+I RW+ G RTCP T ++L +PN +R
Sbjct: 270 PEGLQCPITLELMTDPVTLATGQTYDRASIKRWVKSGCRTCPVTGEKLRSADVVPNVAVR 329
Query: 126 QLI 128
++
Sbjct: 330 GIV 332
>Os04g0686000 U box domain containing protein
Length = 413
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQEL-WDVTPIPNTTL 124
P+ F+CPISL+ M DPVTL TG TY+ I RWL L TCP T Q + D P PN TL
Sbjct: 14 PSYFVCPISLQIMRDPVTLPTGITYDRDGIERWL-LTAGTCPLTKQPVPPDCDPTPNHTL 72
Query: 125 RQLIAAW 131
R+LI +W
Sbjct: 73 RRLIQSW 79
>Os01g0823900 Arm repeat protein
Length = 680
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTLR 125
P+ F CPISL+ M DPV + +GQTY+ +I RW + G TCP T Q L ++ + N L+
Sbjct: 275 PSDFRCPISLDLMRDPVVVASGQTYDRESIDRWFSSGKSTCPKTGQVLANLELVSNKALK 334
Query: 126 QLIAAW 131
LI+ W
Sbjct: 335 NLISKW 340
>Os05g0476700 Similar to Arm repeat protein
Length = 677
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 69 FICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTLRQLI 128
F CPISL+ M DPV +GQTY+ +I+RW G TCP T Q L ++ +PN L+ LI
Sbjct: 279 FRCPISLDLMRDPVVSASGQTYDRESITRWFGSGKSTCPKTGQVLANLELVPNKALKNLI 338
Query: 129 AAW 131
+ W
Sbjct: 339 SRW 341
>Os05g0439400 Similar to Arm repeat containing protein
Length = 452
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 36/56 (64%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPN 121
PA F CPISLE M PV+L TG TY+ A+I RWL GHRTCP T L +PN
Sbjct: 29 PAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPN 84
>Os02g0539200 U box domain containing protein
Length = 442
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 65 VPAVFICPISLEPMVDPVTLCTGQTYESANISRWL------ALGHRTCPTTMQEL--WDV 116
VP+ F+CPISLE M DPVTL TG TY+ ++I RW+ G TCP T ++L +
Sbjct: 8 VPSYFLCPISLEIMRDPVTLATGITYDRSSIERWMFGGGGGDGGKGTCPVTRRQLAPAER 67
Query: 117 TPIPNTTLRQLIAAW 131
PN TLR+LI AW
Sbjct: 68 EATPNHTLRRLIQAW 82
>Os04g0348400 U box domain containing protein
Length = 459
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 66 PAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTLR 125
PA+F+CPIS M DPV + +GQTY+ +I W + G++ CP T Q L IPN +R
Sbjct: 76 PALFLCPISSGIMRDPVVIESGQTYDRRSIQEWFSAGNQICPQTQQVLSHTIVIPNHLVR 135
Query: 126 QLIAAW 131
+I+ W
Sbjct: 136 TMISQW 141
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,554,584
Number of extensions: 497365
Number of successful extensions: 1610
Number of sequences better than 1.0e-10: 32
Number of HSP's gapped: 1607
Number of HSP's successfully gapped: 32
Length of query: 459
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 355
Effective length of database: 11,605,545
Effective search space: 4119968475
Effective search space used: 4119968475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)