BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0273100 Os01g0273100|AK105320
(191 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0273100 Similar to Ubiquitin conjugating protein-like ... 355 9e-99
Os05g0182500 Rad6 (Ubiquitin carrier protein) 125 1e-29
Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2 123 7e-29
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 123 8e-29
Os07g0166800 Rad6 (Ubiquitin carrier protein) 122 1e-28
Os03g0791800 Rad6 (Ubiquitin carrier protein) 122 2e-28
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 121 3e-28
Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 ... 120 6e-28
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 116 8e-27
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 115 2e-26
Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b 112 2e-25
Os07g0577400 Similar to Constitutive photomorphogenesis pro... 102 1e-22
Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain contai... 100 7e-22
Os01g0839700 Similar to Ubiquitin carrier protein 96 2e-20
Os05g0460200 Similar to Ubiquitin carrier protein 95 3e-20
Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (... 91 5e-19
Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (E... 88 4e-18
Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (... 87 6e-18
Os02g0721100 Similar to E2 ubiquitin-conjugating enzyme Ubc... 87 9e-18
Os01g0925800 Similar to Ubiquitin conjugating enzyme 85 4e-17
Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1 84 6e-17
Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2 84 8e-17
Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1 82 3e-16
Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (... 82 3e-16
D17786 80 8e-16
Os02g0721500 76 2e-14
Os12g0636800 Ubiquitin-conjugating enzyme, E2 domain contai... 76 2e-14
Os10g0447100 Similar to Ubiquitin-conjugating enzyme E2-21 ... 75 2e-14
Os03g0681400 Similar to Ubiquitin-conjugating enzyme E2-18 ... 75 3e-14
Os06g0193000 Similar to Ubiquitin conjugating enzyme 2 69 3e-12
Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (... 68 4e-12
>Os01g0273100 Similar to Ubiquitin conjugating protein-like
(Ubiquitin-conjugating enzyme) (Ubiquitinating enzyme)
Length = 191
Score = 355 bits (912), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 173/191 (90%), Positives = 173/191 (90%)
Query: 1 MARGENNTGAHGSGNVXXXXXXXXXXXXXXXXXXKQQARGAGAEGQSVVRRLQSELMALM 60
MARGENNTGAHGSGNV KQQARGAGAEGQSVVRRLQSELMALM
Sbjct: 1 MARGENNTGAHGSGNVPPPATAASTAAGTAAASGKQQARGAGAEGQSVVRRLQSELMALM 60
Query: 61 MGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCF 120
MGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCF
Sbjct: 61 MGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCF 120
Query: 121 HPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWPNQDEFR 180
HPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWPNQDEFR
Sbjct: 121 HPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWPNQDEFR 180
Query: 181 KMVEKLYKPTA 191
KMVEKLYKPTA
Sbjct: 181 KMVEKLYKPTA 191
>Os05g0182500 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
+RL + LM G+S P+ +NI W I G T ++G +++L+L F +YP K
Sbjct: 7 KRLMRDFKRLMQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
PP VRF + FHPN+ A G+ICLDILQ++WS YDV IL SIQSLL +PN +SP N++A
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
Query: 170 AALWP-NQDEFRKMVEKLYK 188
A L+ N+ E+ + V ++ +
Sbjct: 127 ARLFSENKREYNRKVREIVE 146
>Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2
Length = 153
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 76/124 (61%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
RR+ E L+ PG+SA P +N+ + I G A + YEG ++L L P EYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 67
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
PKVRF T +HPN+D G ICLDIL+DKWS A +RT+LLSIQ+LL PN D PL+
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 127
Query: 170 AALW 173
A W
Sbjct: 128 AKHW 131
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 85/127 (66%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
+R+Q ELM L SA P G+++F W TI G + + Y G + +++ FP +YP+K
Sbjct: 4 KRIQKELMDLRKDPPTSCSAGPAGEDLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYPFK 63
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
PPKV F+T +HPN++++G+ICLDIL+++WS A + +LLSI SLL +PN D PL +
Sbjct: 64 PPKVNFQTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSISSLLTDPNPDDPLVPEI 123
Query: 170 AALWPNQ 176
A ++ +Q
Sbjct: 124 AHVYKSQ 130
>Os07g0166800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
+RL + L G+S P +NI W I G T ++G +++L+L F +YP K
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
PP VRF + FHPN+ A G+ICLDILQ++WS YDV IL SIQSLL +PN +SP N++A
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
Query: 170 AALWP-NQDEFRKMVEKLYK 188
A L+ N+ E+ + V ++ +
Sbjct: 127 ARLFSENKREYNRKVREIVE 146
>Os03g0791800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
+RL + L G+S P +NI W I G T ++G +++L+L F +YP K
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
PP VRF + FHPN+ A G+ICLDILQ++WS YDV IL SIQSLL +PN +SP N++A
Sbjct: 67 PPVVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
Query: 170 AALWP-NQDEFRKMVEKLYK 188
A L+ N+ E+ + V ++ +
Sbjct: 127 ARLFSENKREYNRKVREIVE 146
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 81/124 (65%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
+R+Q EL L SA P G+++F W TI G + + Y G + +++ FP +YP+K
Sbjct: 4 KRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFK 63
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
PPKV F T FHPN++++G+ICLDIL+D+WS A + +LLSI SLL +PN D PL +
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 170 AALW 173
A ++
Sbjct: 124 AHMY 127
>Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19)
(Ubiquitin- protein ligase 9) (Ubiquitin carrier protein
9) (UBCAT4B)
Length = 148
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 79/124 (63%)
Query: 49 VRRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPY 108
+RR+ EL L SA P D++F W TI G + Y G + +++ FP +YP+
Sbjct: 3 LRRIIKELKDLQRDPPTSCSAGPVSDDMFHWQATIMGPNDSPYSGGVFLVTIHFPPDYPF 62
Query: 109 KPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQ 168
KPPKV F+T FHPN++++GNICLDIL+D+WS A + +LLSI SLL +PN D PL +
Sbjct: 63 KPPKVAFKTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 169 AAAL 172
A +
Sbjct: 123 IAHM 126
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 80/124 (64%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
+R+ EL L SA P G+++F W TI G + Y G + +++ FP +YP+K
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFK 63
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
PPKV F+T FHPN++++G+ICLDIL+++WS A + +LLSI SLL +PN D PL +
Sbjct: 64 PPKVSFKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 170 AALW 173
A ++
Sbjct: 124 AHMY 127
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 80/124 (64%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
+R+ EL L SA P G+++F W TI G + + + G + +++ FP +YP+K
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFK 63
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
PPKV F T FHPN++++G+ICLDIL+++WS A + +LLSI SLL +PN D PL +
Sbjct: 64 PPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 170 AALW 173
A ++
Sbjct: 124 AHMY 127
>Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b
Length = 148
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 79/124 (63%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
+R+ EL L SA P +++F W T+ G + + Y G + +++ FP +YP+K
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFK 63
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
PPKV +T FHPN++++G+ICLDIL+++WS A + +LLSI SLL +PN D PL +
Sbjct: 64 PPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 170 AALW 173
A ++
Sbjct: 124 AHMY 127
>Os07g0577400 Similar to Constitutive photomorphogenesis protein 10
Length = 202
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
+R+Q ELM L SA P+GDN++ W+ TI G + YEG + L + FP +YP+K
Sbjct: 62 KRIQKELMDLNASD---CSAGPKGDNLYHWLSTIIGPQGSPYEGGIFFLDIVFPIDYPFK 118
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPL 165
PP V F+T +H NVD+ GN+ +DIL++ WS A + +LL+I++++ P+ PL
Sbjct: 119 PPMVTFKTRIYHCNVDSTGNLSMDILREGWSPALTISKVLLAIKAIITNPDPYCPL 174
>Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 157
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 62 GGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFH 121
DP + + NIF W I G + T +EG ++L+ + P +YP PP+VRF T FH
Sbjct: 20 SADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFH 79
Query: 122 PNVD-AHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAAL 172
PNV G ICLDIL++ WS A+ ++++ +I +L+ P DSPLN + L
Sbjct: 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 131
>Os01g0839700 Similar to Ubiquitin carrier protein
Length = 169
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 14/131 (10%)
Query: 72 EGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNIC 131
+ N+F W TI G T Y+G + ++FP YP PP VRF + +HPNV G +C
Sbjct: 33 DDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVC 92
Query: 132 LDILQ-------------DKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALW-PNQD 177
+ IL ++W+ + V +I+LSI S+L PN++SP N +AA W +D
Sbjct: 93 ISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRD 152
Query: 178 EFRKMVEKLYK 188
+F+K V +L +
Sbjct: 153 DFKKKVRRLVR 163
>Os05g0460200 Similar to Ubiquitin carrier protein
Length = 169
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 14/131 (10%)
Query: 72 EGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNIC 131
+ N+F W TI G T Y+G + + FP YP PP VRF + +HPNV G +C
Sbjct: 33 DDSNVFEWQVTIIGPPDTLYDGGYFNAIMTFPQNYPNSPPSVRFTSEMWHPNVYPDGRVC 92
Query: 132 LDILQ-------------DKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALW-PNQD 177
+ IL ++W+ + V +I+LSI S+L PN++SP N +AA W +D
Sbjct: 93 ISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKRD 152
Query: 178 EFRKMVEKLYK 188
+F+K V ++ +
Sbjct: 153 DFKKKVRRIVR 163
>Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 51 RLQSELMALMMGGDPGVSAFPEG-DNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
RL ++ L + +S FP G D++ ++ TI Y G + + P YP++
Sbjct: 33 RLHKDIAELNLPKSTRIS-FPNGKDDLMNFEVTIRPDEGY-YVGGKFIFTFQVPPAYPHE 90
Query: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
PPKV+ +T +HPN+D GN+CL+IL++ W +V TI+ + L +PN++ PLN +A
Sbjct: 91 PPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNVNTIVYGLNLLFSQPNDEDPLNHEA 150
Query: 170 AA-LWPNQDEFRKMVEK 185
AA L N ++F + V++
Sbjct: 151 AAVLRDNPEKFERNVQR 167
>Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2-24 kDa)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(E2-EPF5)
Length = 252
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 47 SVVRRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEY 106
+VVR+L EL +L G+ D+ + I G A T YE +R+ L ++
Sbjct: 10 NVVRQLAKELKSLDESPPEGIKVIVNDDDFTTIFADIEGPAGTPYENGVFRMKLLLSRDF 69
Query: 107 PYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLN 166
P PPK F T FHPN+ G IC++ L+ W+ + +R +LL ++ LL EP +S LN
Sbjct: 70 PQSPPKGFFLTKIFHPNIATSGEICVNTLKKDWNPSLGLRHVLLVVRCLLIEPFPESALN 129
Query: 167 TQAAA-LWPNQDEFRKMVEKLY 187
QA L N +E+ + +LY
Sbjct: 130 EQAGKLLLENYEEYARHA-RLY 150
>Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 51 RLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKP 110
RL ++ L + ++ FP G + + Y G ++ +L P YP++P
Sbjct: 33 RLHKDIAELNLPKKTNIT-FPNGKDDLMNIEITLRPDEGYYVGGAFVFTLQVPPTYPHEP 91
Query: 111 PKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAA 170
PKV+ T +HPN+D GN+CL+IL++ W ++ TI+ + L +PN++ PLN AA
Sbjct: 92 PKVKCTTKVYHPNIDLDGNVCLNILREDWKPVLNINTIVYGLNLLFIQPNDEDPLNHDAA 151
Query: 171 A-LWPNQDEFRKMVE 184
A L + +FR+ V+
Sbjct: 152 AVLRDDPQKFRRNVQ 166
>Os02g0721100 Similar to E2 ubiquitin-conjugating enzyme UbcH5B (Fragment)
Length = 234
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 54/90 (60%)
Query: 77 FSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQ 136
F W I G AAT Y G + + + FP +YP++PPK+ F+T +HPN+D G + LDI Q
Sbjct: 53 FHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQ 112
Query: 137 DKWSSAYDVRTILLSIQSLLGEPNNDSPLN 166
D WS A + +LL S+L +P D P N
Sbjct: 113 DNWSPALTINKLLLCFVSVLFDPLLDRPTN 142
>Os01g0925800 Similar to Ubiquitin conjugating enzyme
Length = 195
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 49 VRRLQSELMALMMGGD-PGVS-AFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEY 106
V R+Q EL + GVS A +G I GTIAG T YEG ++ + + PG Y
Sbjct: 4 VSRVQKELTECNRDREVSGVSIALHDGSTISHLTGTIAGPQGTPYEGGTFVIDIRLPGGY 63
Query: 107 PYKPPKVRFETPCFHPNVDA-HGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPL 165
P++PPK++F T +HPN+ + +G ICLDIL+D+WS A ++T LLS+Q+LL P D P
Sbjct: 64 PFEPPKMQFITKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSAPAPDDPQ 123
Query: 166 NTQAA 170
+ A
Sbjct: 124 DAVVA 128
>Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 51 RLQSELMALMMGGDPGVSAFPE-----GDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGE 105
RL E A G A PE N+ W TI G T +EG Y L+L F +
Sbjct: 9 RLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHFSED 68
Query: 106 YPYKPPKVRFETPCFHPNVDAHGNICLDILQDK--WSSAYDVRTILLSIQSLLGEPNNDS 163
YP KPPK +F FHPNV G +CL IL + W A V+ IL+ IQ LL +PN
Sbjct: 69 YPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPAD 128
Query: 164 PLNTQAAALW-PNQDEFRKMVE 184
P T ++ ++ E+++ V
Sbjct: 129 PAQTDGYHIFIQDKPEYKRRVR 150
>Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2
Length = 556
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 51 RLQSELMALMMGGDPGVSAFPEGD-----NIFSWVGTIAGSAATAYEGTSYRLSLAFPGE 105
R+Q E+ L+ GVS GD ++ S+ I G T Y + L + P
Sbjct: 10 RMQKEVKLLLNDPPHGVSLNLSGDESALSSLLSFEARIQGPDETVYSKGVFVLKIQIPER 69
Query: 106 YPYKPPKVRFETPCFHPNVDAHGNICLDIL----QDKWSSAYDVRTILLSIQSLLGEPNN 161
YP++PP V F TP +HPN+D G ICLDIL + W + ++ T+L SI LL +PN
Sbjct: 70 YPFQPPNVTFVTPIYHPNIDNGGRICLDILNLPPKGAWQPSLNIATVLTSIGLLLSDPNP 129
Query: 162 DSPLNTQAAALWP-NQDEF----RKMVEKLYKPTA 191
D L + + + N+ F R EK P+A
Sbjct: 130 DDGLMAEISREYKYNRQVFDINARSWTEKYANPSA 164
>Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 51 RLQSELMALMMGGDPGVSAFPEG-----DNIFSWVGTIAGSAATAYEGTSYRLSLAFPGE 105
RL E A G A PE N+ W TI G T +EG + L+L F +
Sbjct: 9 RLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHFSED 68
Query: 106 YPYKPPKVRFETPCFHPNVDAHGNICLDILQDK--WSSAYDVRTILLSIQSLLGEPNNDS 163
YP KPPK +F FHPNV G +CL IL + W A V+ IL+ IQ LL +PN
Sbjct: 69 YPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPAD 128
Query: 164 PLNTQAAALW-PNQDEFRKMVE---KLYKPTA 191
P T L+ + E+++ V K Y P
Sbjct: 129 PAQTDGYHLFIQDPTEYKRRVRLQAKQYPPIV 160
>Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 150
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%)
Query: 69 AFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHG 128
+FP G + I Y G ++ + YP++PPKV+ +T +HPN+D G
Sbjct: 17 SFPNGKDDLMNFEIIVRPDEGYYLGGTFVFTFQVSPSYPHEPPKVKCKTKVYHPNIDLEG 76
Query: 129 NICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAAL 172
N+CL+IL++ W ++ T++ + L +PN++ PLN +AAA+
Sbjct: 77 NVCLNILREDWKPVLNINTVIYGLNLLFTQPNDEDPLNHEAAAV 120
>D17786
Length = 103
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 107 PYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLN 166
P+KPPK F T FHPN++++G+ICLDIL+++WS A + +LLSI SLL +PN D PL
Sbjct: 26 PFKPPKSSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNGDDPLV 85
Query: 167 TQAAALW 173
+ A ++
Sbjct: 86 PEIAHMY 92
>Os02g0721500
Length = 290
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 38 ARGAGAEGQSVVRRLQSELMALMMGGDPGVSAFPEG-DNIFSWVGTIAGSAATAYEGTSY 96
AR E ++ +R +++EL L P + PE + F W I G A T Y G ++
Sbjct: 20 ARRQDEERKTALRIIRNELRLLWRDPPPYLRPGPEPVTDPFHWEVVIDGPAGTPYAGGTF 79
Query: 97 RLSLAFPGE-YPYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSL 155
+ + P YP+ PKV F+T +HPN+D GN+ LD + WS A +R +L+ S+
Sbjct: 80 PVDIQLPAAGYPFVHPKVTFKTLVYHPNIDEEGNMVLD--AESWSCATKLRGLLIGFVSV 137
Query: 156 LGEPNNDSPLNTQAA 170
L +P D P+N A
Sbjct: 138 LYDPLLDYPINYDIA 152
>Os12g0636800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 161
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 51 RLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKP 110
RLQ EL + G + DN+ WV + G+A T Y G +Y+L + FP YP +
Sbjct: 19 RLQKELAEWQVSPPSGFK-YRVSDNLQRWVIEVTGAAGTLYAGETYQLQVDFPEHYPMEA 77
Query: 111 PKVRFETPC-FHPNVDAHGNICLDILQDKWSSAYDVRTI 148
P+V F P HP++ ++G+ICLDIL D WS A V ++
Sbjct: 78 PQVIFLNPAPMHPHIYSNGHICLDILYDSWSPAMTVSSV 116
>Os10g0447100 Similar to Ubiquitin-conjugating enzyme E2-21 kDa 2 (EC 6.3.2.19)
(Ubiquitin- protein ligase 5) (Ubiquitin carrier protein
5)
Length = 144
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
+R + +LM LMM D V +G F G + Y+G +++ + P YPYK
Sbjct: 6 KRREMDLMKLMMS-DYKVEMVNDGMQEF--FVEFRGPTESIYQGGVWKVRVELPDAYPYK 62
Query: 110 PPKVRFETPCFHPNVD-AHGNICLDILQDKWSSAYDVRTIL-LSIQSLLGEPNNDSPLNT 167
P + F +HPNVD G++CLD++ WS +D+ + + + LL PN PLN
Sbjct: 63 SPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNG 122
Query: 168 QAAAL 172
+AAAL
Sbjct: 123 EAAAL 127
>Os03g0681400 Similar to Ubiquitin-conjugating enzyme E2-18 kDa (EC 6.3.2.19)
(Ubiquitin- conjugating enzyme 15) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein) (PM42)
Length = 161
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 51 RLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKP 110
RLQ EL + G DN+ WV +AG+A T Y G +Y+L + FP YP +
Sbjct: 19 RLQKELAEWQVNPPSGFK-HKVTDNLQRWVIEVAGAAGTLYAGETYQLQVDFPEHYPMEA 77
Query: 111 PKVRFETPC-FHPNVDAHGNICLDILQDKWSSAYDVRTI 148
P+V F P HP++ ++G+ICLDIL D WS A V ++
Sbjct: 78 PQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSV 116
>Os06g0193000 Similar to Ubiquitin conjugating enzyme 2
Length = 240
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 46 QSVVRRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGE 105
+ ++RLQ E +L P + A P ++I W + GSA T +EG Y L FP +
Sbjct: 4 KGCLKRLQKEYHSLCKEPPPQIVARPLPNDILEWHFVLEGSAGTPFEGGYYYGKLKFPPD 63
Query: 106 YPYKPPKVRFETPC--FHPNVDAHGNICL---DILQDKWSSAYDVRTILLSIQSLL 156
YP+KPP + TP F P H ICL D + W+ + V +IL + S +
Sbjct: 64 YPFKPPSISMTTPSGRFAP----HKRICLSMSDFHPESWNPMWSVASILTGLLSFM 115
>Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (EC 6.3.2.19)
(Ubiquitin-protein ligase I) (Ubiquitin carrier protein
I) (SUMO-1-protein ligase) (SUMO- 1 conjugating enzyme)
(Ubiquitin carrier protein 9) (p18)
Length = 139
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%)
Query: 75 NIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDI 134
N+ W I G T +EG + L++ F +YP P +F + FH NV G +CL I
Sbjct: 5 NLMVWRCIIPGKEGTDWEGGYFPLTMQFTEDYPTNAPSCKFPSGFFHINVYDSGAVCLSI 64
Query: 135 LQDKWSSAYDVRTILLSIQSLLGEPNNDS 163
L W + VR IL+ IQ L +PN +S
Sbjct: 65 LSTAWKPSITVRQILIGIQELFDDPNPNS 93
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.132 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,682,497
Number of extensions: 265101
Number of successful extensions: 509
Number of sequences better than 1.0e-10: 32
Number of HSP's gapped: 499
Number of HSP's successfully gapped: 32
Length of query: 191
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 96
Effective length of database: 12,075,471
Effective search space: 1159245216
Effective search space used: 1159245216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 153 (63.5 bits)