BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0172200 Os01g0172200|AK100326
(759 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0172200 WW/Rsp5/WWP domain containing protein 1275 0.0
Os01g0549400 Similar to RNA helicase-like protein DB10 620 e-177
Os11g0689400 WW/Rsp5/WWP domain containing protein 597 e-171
AK107287 404 e-112
AK111212 403 e-112
Os07g0301200 Similar to RNA helicase (Fragment) 319 4e-87
Os08g0159900 DEAD/DEAH box helicase, N-terminal domain cont... 314 1e-85
Os11g0599500 Similar to RNA helicase (Fragment) 301 1e-81
AK110107 299 5e-81
Os07g0202100 Similar to ATP-dependent RNA helicase ded1 296 3e-80
Os03g0805200 Similar to RNA helicase (Fragment) 295 6e-80
AK119751 292 6e-79
Os03g0308500 DEAD/DEAH box helicase, N-terminal domain cont... 291 1e-78
Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (... 288 1e-77
Os03g0708600 DEAD/DEAH box helicase, N-terminal domain cont... 258 1e-68
Os03g0827700 Similar to ATP-dependent RNA helicase 235 8e-62
Os02g0150100 Similar to DEAD-box protein abstrakt 234 2e-61
Os09g0520700 Similar to RNA helicase 213 5e-55
Os07g0660000 198 1e-50
Os04g0533000 Similar to RNA helicase (Fragment) 197 2e-50
Os08g0416100 DEAD/DEAH box helicase, N-terminal domain cont... 197 2e-50
Os03g0669000 Similar to RNA helicase (Fragment) 196 4e-50
Os07g0647900 DEAD/DEAH box helicase, N-terminal domain cont... 194 3e-49
Os02g0641800 Similar to RNA helicase (Fragment) 193 3e-49
Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (... 192 1e-48
Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (... 191 1e-48
AK068197 189 5e-48
Os10g0503700 Similar to RNA helicase (Fragment) 187 2e-47
Os12g0481100 Similar to RNA helicase 186 7e-47
Os01g0618500 Similar to RNA helicase (Fragment) 180 3e-45
Os01g0618400 Similar to RNA helicase (Fragment) 180 3e-45
Os02g0146600 Similar to Eukaryotic initiation factor 4A (eI... 176 6e-44
Os07g0633500 DEAD/DEAH box helicase, N-terminal domain cont... 175 1e-43
Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A) 171 2e-42
Os01g0184500 DEAD/DEAH box helicase, N-terminal domain cont... 170 3e-42
Os01g0164500 Similar to ATP-dependent RNA helicase-like pro... 169 9e-42
Os01g0549700 Similar to RNA helicase (Fragment) 167 3e-41
Os01g0550000 DEAD/DEAH box helicase, N-terminal domain cont... 167 4e-41
Os02g0826100 Similar to RNA helicase (Fragment) 155 2e-37
Os07g0143700 Similar to DEAD-Box RNA helicase-like protein 151 2e-36
Os05g0110500 Similar to RNA helicase (Fragment) 147 4e-35
Os04g0510400 Similar to RNA helicase (Fragment) 146 7e-35
Os06g0697200 DEAD/DEAH box helicase domain containing protein 145 1e-34
Os03g0219700 DEAD/DEAH box helicase, N-terminal domain cont... 136 6e-32
Os02g0636300 DEAD/DEAH box helicase, N-terminal domain cont... 135 1e-31
Os12g0611200 DEAD/DEAH box helicase, N-terminal domain cont... 130 3e-30
Os06g0535100 Similar to Helicase pitchoune (Fragment) 125 1e-28
Os03g0108600 DEAD/DEAH box helicase, N-terminal domain cont... 114 2e-25
Os03g0728800 Similar to RNA helicase (Fragment) 113 5e-25
Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (... 105 1e-22
Os01g0197200 Similar to Ethylene-responsive RNA helicase 87 4e-17
Os07g0517000 DEAD/DEAH box helicase domain containing protein 81 4e-15
Os09g0383400 DEAD/DEAH box helicase, N-terminal domain cont... 71 3e-12
Os02g0201900 DEAD/DEAH box helicase domain containing protein 69 9e-12
Os01g0911100 Similar to DEAD box RNA helicase 68 3e-11
Os07g0681600 ATP-dependent DNA helicase RecQ family protein 68 3e-11
>Os01g0172200 WW/Rsp5/WWP domain containing protein
Length = 759
Score = 1275 bits (3300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/748 (84%), Positives = 635/748 (84%)
Query: 12 RGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYDXXXXXXXXXXXXXXXXXXXR 71
RGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYD R
Sbjct: 12 RGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYDRPTAPPPSSPPAQQPPERPR 71
Query: 72 NSDPAESQAQAGASRTQXXXXXXXXXXXXHLNDHFERRTEAAGSHAQNVPFTEQNTRSNP 131
NSDPAESQAQAGASRTQ HLNDHFERRTEAAGSHAQNVPFTEQNTRSNP
Sbjct: 72 NSDPAESQAQAGASRTQNAAPADDRARNDHLNDHFERRTEAAGSHAQNVPFTEQNTRSNP 131
Query: 132 SSQPCSAAGVYPAQNVFSEAASGDRTSPEAYRAKHEITIVGNEAPAPFMTFQSTGFPPEI 191
SSQPCSAAGVYPAQNVFSEAASGDRTSPEAYRAKHEITIVGNEAPAPFMTFQSTGFPPEI
Sbjct: 132 SSQPCSAAGVYPAQNVFSEAASGDRTSPEAYRAKHEITIVGNEAPAPFMTFQSTGFPPEI 191
Query: 192 LREVSAHNLHDYLMHFLVSFSKEIRRSLCVHTTYVITTLDVHLSRLFKSTIYVKVQQAGF 251
LREVSAHNLHDYLMHFLVSFSKEIRRSLCVHTTYVITTLDVHLSRLFKSTIYVKVQQAGF
Sbjct: 192 LREVSAHNLHDYLMHFLVSFSKEIRRSLCVHTTYVITTLDVHLSRLFKSTIYVKVQQAGF 251
Query: 252 SAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSP 311
SAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSP
Sbjct: 252 SAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSP 311
Query: 312 TRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMR 371
TRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMR
Sbjct: 312 TRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMR 371
Query: 372 RVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLS 431
RVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLS
Sbjct: 372 RVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLS 431
Query: 432 NPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQ 491
NPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQ
Sbjct: 432 NPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQ 491
Query: 492 LARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYD 551
LARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYD
Sbjct: 492 LARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYD 551
Query: 552 FPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMVXX 611
FPTGVEDYVHRI VAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMV
Sbjct: 552 FPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMVSR 611
Query: 612 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 671
TD
Sbjct: 612 GGYGGRSRRWASSDDSYGGRGYDSGYTSRSTDNYNSGYGSQSGNGSSFHSSFHNSNSGNQ 671
Query: 672 XXDTSGFQTSFHNSSSNNQTSDNPSFHASSNNDQPGDGLSFHARFYSSSRGSDQSRTNNA 731
DTSGFQTSFHNSSSNNQTSDNPSFHASSNNDQPGDGLSFHARFYSSSRGSDQSRTNNA
Sbjct: 672 FGDTSGFQTSFHNSSSNNQTSDNPSFHASSNNDQPGDGLSFHARFYSSSRGSDQSRTNNA 731
Query: 732 GFRDXXXXXXXXXXHEDPGSKAVGVSNW 759
GFRD HEDPGSKAVGVSNW
Sbjct: 732 GFRDRSRSPPSNRNHEDPGSKAVGVSNW 759
>Os01g0549400 Similar to RNA helicase-like protein DB10
Length = 792
Score = 620 bits (1599), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/455 (66%), Positives = 351/455 (77%), Gaps = 51/455 (11%)
Query: 155 DRTSPEAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVSAHNLHDYLMHFLVSFSKE 214
D S EAYR +HEIT+VG+ PAP +F++ G
Sbjct: 125 DDPSTEAYRHRHEITVVGDNVPAPITSFETGG---------------------------- 156
Query: 215 IRRSLCVHTTYVITTLDVHLSRLFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAV 274
F I ++Q+AGFS+PTPIQAQSWPIAL+ +D+VA+
Sbjct: 157 -----------------------FPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAI 193
Query: 275 AKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISS 334
AKTGSGKTLGYL+PGF+ +KRLQ+N R GPTVLVL+PTRELATQI +EA KFGRSSRISS
Sbjct: 194 AKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISS 253
Query: 335 VCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGF 394
CLYGGAPKGPQLRDL+RG D+VVATPGRLNDILEMRR+SL QVSYLVLDEADRMLDMGF
Sbjct: 254 TCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGF 313
Query: 395 EPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYV 454
EPQIRKIVK++ P+RQTLM+TATWPKEVR+IA DLL +PVQV IG+ D+LVAN +ITQ V
Sbjct: 314 EPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNV 373
Query: 455 DVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAER 514
++ITP EK RRL+QILRSQ+ GSK++IFC+TKRMCDQLAR L RQ+GASAIHGDKSQ+ER
Sbjct: 374 ELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSER 433
Query: 515 DSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXV 574
+ VLS FRSGR PILVATDVAARGLDIKDIRVV+NYDFPTG+EDYVHRI V
Sbjct: 434 EKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGV 493
Query: 575 AYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMV 609
AYTFFCDQDSKYA+DL+KILEGANQ V + L DM
Sbjct: 494 AYTFFCDQDSKYAADLIKILEGANQRVPRDLADMA 528
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 14 PRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYD 51
PRYAP DP+LPKPWRGL+DG TGYLY+WNPET QY+
Sbjct: 10 PRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNITQYE 47
>Os11g0689400 WW/Rsp5/WWP domain containing protein
Length = 1398
Score = 597 bits (1540), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/474 (62%), Positives = 347/474 (73%), Gaps = 51/474 (10%)
Query: 135 PCSAAGVYPAQNVFSEAASGDRTSPEAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILRE 194
P A + P +F+ S +AYR HE+T VG P PFMTF++TG
Sbjct: 559 PFPEASMRPPSRMFAPPNFPSIASADAYRQHHEVTAVGENVPPPFMTFEATG-------- 610
Query: 195 VSAHNLHDYLMHFLVSFSKEIRRSLCVHTTYVITTLDVHLSRLFKSTIYVKVQQAGFSAP 254
F I ++ AGF P
Sbjct: 611 -------------------------------------------FPPEILQEIHAAGFLNP 627
Query: 255 TPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPTRE 314
TPIQAQ+WP+AL+NRDIVA+AKTGSGKTLGYLIP FI L+R Q+N GPTVLVL+PTRE
Sbjct: 628 TPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPMLGPTVLVLAPTRE 687
Query: 315 LATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVS 374
LA+QIQDEA KFGRSSR+S CLYGG KG QLR+LERGADIVVATPGRLNDILEMR++S
Sbjct: 688 LASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLRELERGADIVVATPGRLNDILEMRKIS 747
Query: 375 LHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPV 434
LHQVS+LVLDEADRMLDMGFEPQIRKIV ++ RQTLM+TATWPKEV KIA DLL +PV
Sbjct: 748 LHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPRNRQTLMYTATWPKEVTKIAGDLLKDPV 807
Query: 435 QVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQLAR 494
QVNIG+ D+LVANKSITQYV+V+ P +K RRL+QILR+QE GSK+IIFCSTK+MCDQLAR
Sbjct: 808 QVNIGSIDELVANKSITQYVEVVPPLDKQRRLEQILRAQERGSKVIIFCSTKKMCDQLAR 867
Query: 495 NLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPT 554
++ R +GA++IHGDKSQAERD+VL++FR+GR PILVATDVAARGLDIKDIRVV+NYDFPT
Sbjct: 868 DIGRSFGAASIHGDKSQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPT 927
Query: 555 GVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDM 608
G+EDYVHRI V+YTFF +QD KYA DLVK+LEGANQ V +L++M
Sbjct: 928 GIEDYVHRIGRTGRAGATGVSYTFFSEQDWKYAGDLVKVLEGANQHVPPELQEM 981
>AK107287
Length = 554
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/457 (47%), Positives = 291/457 (63%), Gaps = 69/457 (15%)
Query: 162 YRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVSAHNLHDYLMHFLVSFSKEIRRSLCV 221
YRA ++TI G P P +F GFP DY++
Sbjct: 115 YRASKQMTIQGQNVPKPVTSFDEAGFP-------------DYILS--------------- 146
Query: 222 HTTYVITTLDVHLSRLFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGK 281
++++ GF+ P+ IQ+Q+WP+AL RD+VA+A+TGSGK
Sbjct: 147 -----------------------EIKKMGFAEPSAIQSQAWPMALSGRDLVAIAETGSGK 183
Query: 282 TLGYLIPGFI------LLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSV 335
T+G+ +P + LLK DGP L+L+PTRELA QIQ E +FG SSR+ +
Sbjct: 184 TIGFALPAMVHINAQPLLK-----PGDGPIALILAPTRELANQIQVECNRFGGSSRLRTC 238
Query: 336 CLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFE 395
+YGG PKGPQ RDL+RGA+IV+ATPGRL D+++ + +L +V+YLV+DEADRMLDMGFE
Sbjct: 239 AVYGGVPKGPQTRDLQRGAEIVIATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFE 298
Query: 396 PQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVD 455
PQIRKI++Q++P RQTLMF+ATWPKEV+++A D L++ QVNIG+T +L AN ++ Q ++
Sbjct: 299 PQIRKILQQIRPDRQTLMFSATWPKEVQRLAGDFLNDFAQVNIGST-ELAANHNVKQIIE 357
Query: 456 VITPPEKSRRLDQILR--SQEPGSKIIIFCSTKRMCDQLARNLARQYG--ASAIHGDKSQ 511
V + EK +L L SQE G K+IIF STKR+ D L + L RQ G A AIHGDK Q
Sbjct: 358 VCSEFEKKGKLIGHLETISQENG-KVIIFTSTKRVADDLTKYL-RQDGWPALAIHGDKQQ 415
Query: 512 AERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXX 571
ERD VL+EF+SGR PI+VAT VA+RGLD+KDI V+NYDFPT EDYVH+I
Sbjct: 416 QERDWVLAEFKSGRSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGR 475
Query: 572 XXVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDM 608
AYTFF ++SK A +LV IL A Q + +++ +M
Sbjct: 476 TGTAYTFFTPENSKSARELVGILREAKQEIPREIEEM 512
>AK111212
Length = 545
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/461 (46%), Positives = 287/461 (62%), Gaps = 72/461 (15%)
Query: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVSAHNLHDYLMHFLVSFSKEIRRSL 219
EA+R KH++TI G E P P TF GFP ++ E
Sbjct: 117 EAFRRKHQMTIAGTEVPKPVETFDEAGFPRYVMDE------------------------- 151
Query: 220 CVHTTYVITTLDVHLSRLFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGS 279
V+ GF APT IQ+Q WP+AL RD+V +A+TGS
Sbjct: 152 --------------------------VKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGS 185
Query: 280 GKTLGYLIPGFILLKRLQHNSR------DGPTVLVLSPTRELATQIQDEAKKFGRSSRIS 333
GKTL Y +P + + N++ DGP VLVL+PTRELA QIQ+E KKFGRSSRI
Sbjct: 186 GKTLTYCLPSIVHI-----NAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIR 240
Query: 334 SVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMG 393
+ C+YGG PKGPQ+RDL RG ++ +ATPGRL D+LE + +L +V+YLVLDEADRMLDMG
Sbjct: 241 NTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMG 300
Query: 394 FEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQY 453
FEPQIRKI+ Q++P RQTL ++A WPKEVR +ASD L++ +QVNIG+ +L AN ITQ
Sbjct: 301 FEPQIRKIIGQIRPDRQTLTWSAAWPKEVRALASDFLNDFIQVNIGSM-ELAANHRITQI 359
Query: 454 VDVITPPEKSRR----LDQILRSQEPGSKIIIFCSTKRMCDQLARNLARQYG--ASAIHG 507
V+V+T EK R L++ + ++E +KI+IF TKR+ D++ R L RQ G A +IHG
Sbjct: 360 VEVVTDMEKRDRMIKHLEKTMENKE--NKILIFVGTKRIADEITRFL-RQDGWPALSIHG 416
Query: 508 DKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXX 567
DK Q ERD VL +F++G+ PI+VATDVA+RG+D+++I V+NYD+P EDY+HRI
Sbjct: 417 DKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPHNSEDYIHRIGRTG 476
Query: 568 XXXXXXVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDM 608
A T F + K A DLV +L A Q + +L +M
Sbjct: 477 RAGAKGTAITLFTTDNQKQARDLVNVLTEAKQQIDPRLVEM 517
>Os07g0301200 Similar to RNA helicase (Fragment)
Length = 512
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 163/359 (45%), Positives = 230/359 (64%), Gaps = 8/359 (2%)
Query: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRL--QHNSRDG-PTV 306
GF P+PIQA +WP L RD + +A TGSGKT+ + +P + ++R + +++ G P V
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRV 170
Query: 307 LVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLND 366
LVLSPTRELA QI D + G ISSVCLYGG KGPQ+ L+ G DIV+ TPGR+ D
Sbjct: 171 LVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKD 230
Query: 367 ILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIA 426
++EM L+ VS++VLDEADRMLDMGFEP++R I+ Q RQT+MF+ATWP V ++A
Sbjct: 231 LIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLA 290
Query: 427 SDLLS-NPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPG--SKIIIFC 483
+ + NP++V IG+ D L AN + Q V+V+ + RL +L +++++F
Sbjct: 291 QEFMDPNPIKVVIGSED-LAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFV 349
Query: 484 STKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIK 542
KR ++ L R+ + A ++HGDK+Q +R LS F+ G CP+++ATDVA+RGLDI
Sbjct: 350 LYKREATRVETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIP 409
Query: 543 DIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLVKILEGANQSV 601
D+ VV+NY +P EDYVHRI VA+TFF ++ A +LV +L A Q V
Sbjct: 410 DVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAGQVV 468
>Os08g0159900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1049
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 249/398 (62%), Gaps = 13/398 (3%)
Query: 219 LCVHTTYVITTLDVHLSRLFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTG 278
L VH V + + S + +++ GF P IQAQ+ PI + RD + +AKTG
Sbjct: 412 LKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTG 471
Query: 279 SGKTLGYLIPGFILLKRLQHNSR----DGPTVLVLSPTRELATQIQDEAKKFGRSSRISS 334
SGKTL +++P +L+ ++ DGP L+++PTREL QI + KKF ++ I+
Sbjct: 472 SGKTLAFVLP---MLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALGINC 528
Query: 335 VCLYGGAPKGPQLRDLERGADIVVATPGRLNDIL---EMRRVSLHQVSYLVLDEADRMLD 391
V +YGG+ Q+ +L+RGA+IVV TPGR+ DIL + +L +V++LV+DEADRM D
Sbjct: 529 VAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFD 588
Query: 392 MGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSIT 451
MGFEPQI +IV+ +P RQT++F+AT+P++V +A +L+ PV++ +G + V NK IT
Sbjct: 589 MGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQVGG--RSVVNKDIT 646
Query: 452 QYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQLARNLARQ-YGASAIHGDKS 510
Q V+V E+ RL ++L KI++F ++ CD L ++L + Y ++HG K
Sbjct: 647 QLVEVRPENERFFRLLELLGEWFDKGKILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKD 706
Query: 511 QAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXX 570
Q +R+S L++F+S C +L+AT VAARGLD+K++ +VVNYD P EDYVHR+
Sbjct: 707 QTDRESTLADFKSNVCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAG 766
Query: 571 XXXVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDM 608
A TF +++ +YA DLVK LE + Q+V + L+ +
Sbjct: 767 RKGFAVTFISEEEERYAPDLVKALELSEQAVPEDLKGL 804
>Os11g0599500 Similar to RNA helicase (Fragment)
Length = 623
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/379 (44%), Positives = 231/379 (60%), Gaps = 21/379 (5%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIP---GFILLKRLQHNSRD 302
+++ + PTP+Q + PI+L RD++A A+TGSGKT + P G + Q R
Sbjct: 170 IRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRG 229
Query: 303 G-----PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIV 357
G P L+LSPTREL+ QI +EA+KF + + V YGGAP QLRDLERG DI+
Sbjct: 230 GMRTACPLALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDIL 289
Query: 358 VATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQ----PKRQTLM 413
VATPGRL D+LE RVSL + YL LDEADRMLDMGFEPQ+R+IV+Q+ RQT++
Sbjct: 290 VATPGRLVDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRRIVEQMDMPPPGARQTML 349
Query: 414 FTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQ 473
F+AT+PKE++++ASD L N + + +G + I Q V+ + +K L +L +Q
Sbjct: 350 FSATFPKEIQRMASDFLENYIFLAVGRVGS--STDLIVQRVEFVQEADKRSHLMDLLHAQ 407
Query: 474 E----PG--SKIIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRC 526
PG + ++F TKR D L L + A++IHGD++Q ER+ L F+SG
Sbjct: 408 RDSATPGKPTLTLVFVETKRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKSGHT 467
Query: 527 PILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKY 586
PILVATDVAARGLDI + VVN+D P ++DYVHRI +A FF + +S
Sbjct: 468 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSM 527
Query: 587 ASDLVKILEGANQSVSQQL 605
A L ++++ +NQ V L
Sbjct: 528 ARSLAELMQESNQEVPAWL 546
>AK110107
Length = 671
Score = 299 bits (766), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 175/393 (44%), Positives = 235/393 (59%), Gaps = 35/393 (8%)
Query: 230 LDVHLSRLFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPG 289
LD HL R + A + PTP+Q S PI + RD++A A+TGSGKT G+L P
Sbjct: 187 LDDHLIR--------NIDLARYKIPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFP- 237
Query: 290 FILLKRLQ---------------HNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISS 334
IL + Q + PT L+L+PTREL +QI DE++KF S +
Sbjct: 238 -ILSQAFQTGPSANPTAGGGGFGRQRKAYPTSLILAPTRELVSQIYDESRKFAYRSWVRP 296
Query: 335 VCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGF 394
+YGGA G QLR +ERG D++VATPGRL D++E R+SL + YLVLDEADRMLDMGF
Sbjct: 297 CVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGF 356
Query: 395 EPQIRKIVK-----QVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKS 449
EPQIR+IV+ VQ RQTLMF+AT P++++ +A D L + + +++G N
Sbjct: 357 EPQIRRIVEGEDMPNVQ-DRQTLMFSATSPRDIQMLARDFLKDYIFLSVGRVGSTSEN-- 413
Query: 450 ITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQLARNLARQ-YGASAIHGD 508
ITQ V+ + +K L IL + G +IF TKRM D L+ L Q + A++IHGD
Sbjct: 414 ITQKVEYVEDVDKRSVLLDILHTHGAG-LTLIFVETKRMADSLSDFLINQNFPATSIHGD 472
Query: 509 KSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXX 568
++Q ER+ L FR+GRCPILVAT VAARGLDI ++ VVNYD PT ++DYVHRI
Sbjct: 473 RTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGR 532
Query: 569 XXXXXVAYTFFCDQDSKYASDLVKILEGANQSV 601
+ FF + +L+ +L+ ANQ V
Sbjct: 533 AGNTGHSTAFFNRGNRGVVRELLDLLKEANQEV 565
>Os07g0202100 Similar to ATP-dependent RNA helicase ded1
Length = 638
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/377 (43%), Positives = 232/377 (61%), Gaps = 19/377 (5%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGF--ILLKRLQHNSRDG 303
+++ + PTP+Q + PI++ RD++A A+TGSGKT + P I+ R SR
Sbjct: 184 IRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGS 243
Query: 304 ----PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVA 359
P L+LSPTREL+ QI +EA+KF + + V YGGAP QLR+LERG +I+VA
Sbjct: 244 RTAYPLALILSPTRELSVQIHEEARKFAYQTGVKVVVAYGGAPITQQLRELERGVEILVA 303
Query: 360 TPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQV----QPKRQTLMFT 415
TPGRL D+LE RVSL + YL LDEADRMLDMGFEPQIRKIV+Q+ + +RQT++F+
Sbjct: 304 TPGRLMDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGERQTMLFS 363
Query: 416 ATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEP 475
AT+PKE++++ASD L++ + + +G + I Q V+ + +K L +L +Q
Sbjct: 364 ATFPKEIQRMASDFLADYIFLAVGRVGS--STDLIVQRVEFVLDADKRSYLMDLLHAQRA 421
Query: 476 GSK------IIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPI 528
++F TKR D L L + A++IHGD++Q ER+ L F+SG PI
Sbjct: 422 NGTHGKQALTLVFVETKRGADALENWLYNNGFPATSIHGDRTQQEREYALRSFKSGATPI 481
Query: 529 LVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYAS 588
LVATDVAARGLDI + V+N+D P ++DYVHRI +A FF + ++ A
Sbjct: 482 LVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLAR 541
Query: 589 DLVKILEGANQSVSQQL 605
L ++++ ANQ V Q L
Sbjct: 542 PLSELMQEANQEVPQWL 558
>Os03g0805200 Similar to RNA helicase (Fragment)
Length = 637
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/377 (43%), Positives = 231/377 (61%), Gaps = 19/377 (5%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGF--ILLKRLQHNSRDG 303
+++ + PTP+Q + PI++ RD++A A+TGSGKT + P I+ R R
Sbjct: 189 IRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGS 248
Query: 304 ----PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVA 359
P L+LSPTREL+ QI +EA+KF + + V YGGAP QLR+LERG +I+VA
Sbjct: 249 RTAYPLALILSPTRELSVQIHEEARKFAYQTGVRVVVAYGGAPIHQQLRELERGVEILVA 308
Query: 360 TPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQ--PK--RQTLMFT 415
TPGRL D+LE RVSL V YL LDEADRMLDMGFEPQIRKIV+Q+ P+ RQT++F+
Sbjct: 309 TPGRLMDLLERARVSLQMVKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFS 368
Query: 416 ATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEP 475
AT+PKE++++ASD L++ + + +G + I Q V+ + +K L +L +Q+
Sbjct: 369 ATFPKEIQRMASDFLADYIFLAVGRVGS--STDLIAQRVEFVLEADKRSYLMDLLHAQKA 426
Query: 476 GSK------IIIFCSTKRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPI 528
++F TKR D L L + A++IHGD++Q ER+ L F+SG PI
Sbjct: 427 NGTHGKQALTLVFVETKRGADALENWLYTNGFPATSIHGDRTQQEREYALRSFKSGATPI 486
Query: 529 LVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYAS 588
LVATDVAARGLDI + V+N+D P ++DYVHRI +A FF + + A
Sbjct: 487 LVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNLSLAR 546
Query: 589 DLVKILEGANQSVSQQL 605
L ++++ ANQ V Q L
Sbjct: 547 PLCELMQEANQEVPQWL 563
>AK119751
Length = 628
Score = 292 bits (748), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 230/373 (61%), Gaps = 14/373 (3%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHN-----S 300
+++ ++ PTP+Q + PI L RDI+A A+TGSGKT + P L + +
Sbjct: 180 IRRCKYTKPTPVQRYAIPIGLAGRDIMACAQTGSGKTAAFCFPIISGLVKAGYQPTGRQR 239
Query: 301 RDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVAT 360
+ P L+L+PTREL +QI +EA+KF S I V +YGGAP QLR++ERG D++VAT
Sbjct: 240 KALPAALILAPTRELTSQIYEEARKFSYQSGIRPVVIYGGAPVVNQLREMERGCDMLVAT 299
Query: 361 PGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIV--KQVQP--KRQTLMFTA 416
P RL+D++E RVSL + YL LDEADRMLDMGFEPQIR+IV + + P +RQT++F+A
Sbjct: 300 PRRLSDLIERARVSLAAIRYLALDEADRMLDMGFEPQIRRIVEGEDMPPTGQRQTMLFSA 359
Query: 417 TWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPG 476
T+PKE++++A+D L + + + +G + I Q+++ + +K + + + E
Sbjct: 360 TFPKEIQRLAADFLHDYIFLTVGRVGS--STDLIAQHIEYVQQDQKRETVLDCVNTVE-- 415
Query: 477 SKIIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVA 535
++F TKR DQL L RQ A++I GDKSQAER+ L FRSG+C ILVATDVA
Sbjct: 416 GLTLVFVETKRGADQLEDYLLRQNLPATSIRGDKSQAEREMALRAFRSGKCRILVATDVA 475
Query: 536 ARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLVKILE 595
ARGLDI + V+NYD P ++DYVHRI +A FF D D A L ++L
Sbjct: 476 ARGLDIPHVTHVINYDLPKDIDDYVHRIGRTGRAGKKGLATAFFTDDDFGLARSLQEVLS 535
Query: 596 GANQSVSQQLRDM 608
Q V L ++
Sbjct: 536 ETGQEVPGWLANI 548
>Os03g0308500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 770
Score = 291 bits (746), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/378 (40%), Positives = 234/378 (61%), Gaps = 12/378 (3%)
Query: 238 FKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFI-LLKRL 296
F + + + G+ PT IQ Q+ PI L RDI+ +AKTGSGKT +++P + ++ +
Sbjct: 226 FPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQP 285
Query: 297 QHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADI 356
+ +GP +V +PTRELA QI EAKKF + + +YGG K Q ++L+ G +I
Sbjct: 286 ELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEI 345
Query: 357 VVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTA 416
V+ATPGRL D+L+M+ + + + +YLVLDEADRM D+GFEPQIR IV Q++P RQTL+F+A
Sbjct: 346 VIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSA 405
Query: 417 TWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPG 476
T P +V ++A ++L++P++V +G AN+ I Q V+V+ P + ++ +L + PG
Sbjct: 406 TMPYKVERLAREILTDPIRVTVGQVGS--ANEDIKQVVNVL--PSDAEKMPWLL-EKLPG 460
Query: 477 ----SKIIIFCSTKRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVA 531
+++F + K D++ L R + +A+HGDK QA R L +F+SG +LVA
Sbjct: 461 MIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVA 520
Query: 532 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI-XXXXXXXXXXVAYTFFCDQDSKYASDL 590
TDVAARGLDIK I+ VVN+D ++ ++HRI AYT ++ ++A +L
Sbjct: 521 TDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAGEL 580
Query: 591 VKILEGANQSVSQQLRDM 608
V L A Q V +L D+
Sbjct: 581 VHCLIAAGQDVPNELMDL 598
>Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase
DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related
sequence 2)
Length = 484
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/365 (44%), Positives = 226/365 (61%), Gaps = 27/365 (7%)
Query: 266 LRNRDIVAVAKTGSGKTLGYLIP---GFILL--KRLQHNSRDG-------PTVLVLSPTR 313
L RD++A A+TGSGKT + +P G + + H R P LVL+PTR
Sbjct: 1 LAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTR 60
Query: 314 ELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRV 373
ELA QI +EAKKF + + V YGG P QLRDLERGADI+VATPGRL D++E +V
Sbjct: 61 ELAAQINEEAKKFSFQTGLRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVERSKV 120
Query: 374 SLHQVSYLVLDEADRMLDMGFEPQIRKIVKQV-QPK---RQTLMFTATWPKEVRKIASDL 429
SL + YLV+DEADRMLDMGFEPQIRKIV+++ P+ RQT++F+AT+P E++++ASD
Sbjct: 121 SLEAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDF 180
Query: 430 LSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPG---SKI-----II 481
LSN + + +G + I Q V++++ EK L +L+ Q G SK+ ++
Sbjct: 181 LSNYIFITVGRVGS--STDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLV 238
Query: 482 FCSTKRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLD 540
F TKR D L L ++ + A+AIHGD++Q ER+S L F++G PI+VATDVA+RGLD
Sbjct: 239 FVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLD 298
Query: 541 IKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLVKILEGANQS 600
+ ++ V+NYD P +EDYVHRI A FF + D A L++++ A Q
Sbjct: 299 VPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQD 358
Query: 601 VSQQL 605
V L
Sbjct: 359 VPDWL 363
>Os03g0708600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 736
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/383 (38%), Positives = 222/383 (57%), Gaps = 27/383 (7%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRL----QHNSR 301
V++AG+ P+PIQ S P+ L+ RD++ +A+TGSGKT +++P + RL + N
Sbjct: 330 VEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEA 389
Query: 302 DGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATP 361
+GP +V++PTRELA QI++E KF I V + GG Q + +G ++V+ATP
Sbjct: 390 EGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATP 449
Query: 362 GRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIV-----KQVQPK-------- 408
GRL D LE R L+Q +Y+VLDEADRM+DMGFEPQ+ ++ ++P+
Sbjct: 450 GRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDA 509
Query: 409 ----RQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSR 464
R T MF+AT P V ++A L NPV V IG + A ITQ V + EK
Sbjct: 510 KTIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK--ATDLITQNVIMTKESEKMS 567
Query: 465 RLDQILRSQEPGSK-IIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFR 522
RL +IL + G K I+FC+TK+ D A++L + + + +HG KSQ +R++ L FR
Sbjct: 568 RLQKIL--TDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQRETSLDGFR 625
Query: 523 SGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQ 582
+ R +LVATDVA RG+DI D+ V+NY+ P+ ++ Y HRI +A +F +
Sbjct: 626 NRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLE 685
Query: 583 DSKYASDLVKILEGANQSVSQQL 605
++ DL ++L +N V +L
Sbjct: 686 NTDIFFDLKQMLIQSNSPVPPEL 708
>Os03g0827700 Similar to ATP-dependent RNA helicase
Length = 723
Score = 235 bits (600), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 201/326 (61%), Gaps = 16/326 (4%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDG-- 303
+++ G + PIQ AL RD++A AKTG+GKTL + IP ++K+L DG
Sbjct: 84 LEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIP---MIKQLMEED-DGRS 139
Query: 304 ------PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIV 357
P VLVL+PTRELA Q++ E K+ + ++S+VC+YGG Q L RG D+V
Sbjct: 140 VRRGRIPRVLVLAPTRELAKQVEKEIKE--SAPKLSTVCVYGGVSYNVQQNALSRGVDVV 197
Query: 358 VATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTAT 417
V TPGR+ D++ + L +V YLVLDEAD+ML +GFE + I++Q+ +RQ+++F+AT
Sbjct: 198 VGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQLPAERQSMLFSAT 257
Query: 418 WPKEVRKIASDLLSNPVQVN-IGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPG 476
P V+K++ L+NP+ ++ +G+ D+ +A + I Y +T K L ++ G
Sbjct: 258 MPGWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLYAIPLTSTSKRTVLSDLITVYAKG 316
Query: 477 SKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAA 536
K I+F TKR D+++ L + A+HGD SQ +R+ L+ FR G+ +LVATDVAA
Sbjct: 317 GKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 376
Query: 537 RGLDIKDIRVVVNYDFPTGVEDYVHR 562
RGLDI ++ ++++Y+ P E +VHR
Sbjct: 377 RGLDIPNVDLIIHYELPNDPETFVHR 402
>Os02g0150100 Similar to DEAD-box protein abstrakt
Length = 460
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 210/378 (55%), Gaps = 20/378 (5%)
Query: 245 KVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR--- 301
K+++ G PTPIQ Q P+ L RD++ +A TGSGKTL +++P +++ LQ
Sbjct: 29 KLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLP--LIMVALQEEMMMPI 86
Query: 302 ---DGPTVLVLSPTRELATQIQDEAKKF------GRSSRISSVCLYGGAPKGPQLRDLER 352
+GP +++ P+RELA Q D ++F I + GG QL +++
Sbjct: 87 VPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKK 146
Query: 353 GADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTL 412
G IVVATPGRL D+L ++++L YL LDEADR++D+GFE IR++ + +RQTL
Sbjct: 147 GVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTL 206
Query: 413 MFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRS 472
+F+AT PK+++ A L PV VN+G AN + Q V+ + + L + L+
Sbjct: 207 LFSATMPKKIQNFAKSALVKPVIVNVGRAG--AANLDVIQEVEYVKEDARIIYLLECLQK 264
Query: 473 QEPGSKIIIFCSTKRMCDQLARN-LARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVA 531
P +++FC K D + L + A AIHG K Q ER++ + F++G+ +LVA
Sbjct: 265 TPP--PVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVA 322
Query: 532 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFC-DQDSKYASDL 590
TDVA++GLD DI+ V+NYD P +E+YVHRI +A TF +Q DL
Sbjct: 323 TDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDL 382
Query: 591 VKILEGANQSVSQQLRDM 608
+L+ A Q + L ++
Sbjct: 383 KHLLKEAKQRIPPVLAEL 400
>Os09g0520700 Similar to RNA helicase
Length = 696
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 197/347 (56%), Gaps = 18/347 (5%)
Query: 245 KVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDG- 303
K++ G A PIQA ++ + L D+V A+TG GKTL +++P +L+ L + +
Sbjct: 129 KLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLP---ILESLVNGTHKAS 185
Query: 304 --------PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGAD 355
PTVLVL PTRELA Q+ + +G + +S+ C+YGG+ Q + +G D
Sbjct: 186 RRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGSDYRSQEMAIRKGVD 245
Query: 356 IVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQ--PKRQTLM 413
IVV TPGR+ D +E ++ + + VLDEAD ML+MGF + I+ +V+ K QTL+
Sbjct: 246 IVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTLL 305
Query: 414 FTATWPKEVRKIASDLL-SNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRS 472
F+AT P+ V+K++ L S V++ ++L A+ S+ +++ + I+R
Sbjct: 306 FSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIPDIIRC 365
Query: 473 QEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVAT 532
G + IIF TK L+ +A G+ A+HGD +QA+R+ +L+ FRSG+ +LVAT
Sbjct: 366 YSRGGRTIIFTETKESASDLSGLIA---GSRALHGDVAQAQREVILAGFRSGKFLVLVAT 422
Query: 533 DVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFF 579
+VAARGLDI D+++++ + P VE Y+HR VA F
Sbjct: 423 NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLF 469
>Os07g0660000
Length = 444
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 199/390 (51%), Gaps = 53/390 (13%)
Query: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVL 309
G+ APT IQA+ P AL+ RD++ V +TGSGKT + +P I+ L+H R VL
Sbjct: 2 GWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALP--IIQALLEHEHRPCFFACVL 59
Query: 310 SPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVV----------- 358
+PTRELA QI + + G + + L GG P+ Q L + +VV
Sbjct: 60 APTRELAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVWWRSSRACLPE 119
Query: 359 -------------------ATPGRLNDIL-EMRRVSLHQVSYLVLDEADRMLDMGFEPQI 398
TPGRL D L + S +++ YLVLDEAD +L + F+ +
Sbjct: 120 HLRKGFDSWQLWKERNSRVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAV 179
Query: 399 RKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVIT 458
I+ + +R+T +F+AT ++V+K+ L NPV+V + + LV ++ Q + V+
Sbjct: 180 DDILNVIPKERRTFLFSATMTEKVKKLRRACLKNPVKVEVASKYSLV--DTLRQDLYVVP 237
Query: 459 PPEKSRRLDQILRSQEPGSKIIIF---CSTKRMCDQLARNLARQYGASAIHGDKSQAERD 515
K L +L ++ PGS I++F C + R+ + RNL ++ A +I G SQ +R
Sbjct: 238 AKYKDCYLIHVL-NKMPGSMIMVFVRTCESTRLLALMLRNL--RFKAISISGQMSQDKRL 294
Query: 516 SVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVA 575
L+ FR+ C ILV TDVA+RGLDI+ + VV+NYDFP +DY+HR+
Sbjct: 295 GALNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAG----- 349
Query: 576 YTFFCDQDSKYASDLVKILEGANQSVSQQL 605
S YA LV EG +++Q
Sbjct: 350 -------QSGYAVSLVNQFEGEFFKLTEQF 372
>Os04g0533000 Similar to RNA helicase (Fragment)
Length = 498
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 181/328 (55%), Gaps = 9/328 (2%)
Query: 237 LFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRL 296
K + + + + GF P+PIQ +S PIAL DI+A AK G+GKT + IP L+++
Sbjct: 130 FLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA---LEKI 186
Query: 297 QHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADI 356
+ ++ V++L PTRELA Q K+ G+ +I + GG + L + +
Sbjct: 187 DQD-KNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQPVHL 245
Query: 357 VVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTA 416
+V TPGR+ D+ + L S LV+DEAD++L F+P I+++++ + RQ LMF+A
Sbjct: 246 LVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNRQILMFSA 305
Query: 417 TWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPG 476
T+P V++ L P +N+ D+L K ITQ+ + +K L+ + S+
Sbjct: 306 TFPVTVKEFKDKYLPKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-SKLQI 361
Query: 477 SKIIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVA 535
++ IIFC++ + LA+ + Y IH Q R+ V +FR+G C LV TD+
Sbjct: 362 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 421
Query: 536 ARGLDIKDIRVVVNYDFPTGVEDYVHRI 563
RG+DI+ + VV+N+DFP E Y+HR+
Sbjct: 422 TRGIDIQAVNVVINFDFPKSAETYLHRV 449
>Os08g0416100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 851
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 191/353 (54%), Gaps = 9/353 (2%)
Query: 242 IYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR 301
+Y V+ G+ PTPIQ ++ P+ L DI A+A+TGSGKT +L+P L+R H++
Sbjct: 60 VYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRR--HDAG 117
Query: 302 DGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATP 361
G L+LSPTR+LATQ A++ G+ + + + GG Q +L DI++ATP
Sbjct: 118 AGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATP 177
Query: 362 GRL-NDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPK 420
GRL + + E+ ++L V Y+V DEAD + +G Q+ I+ ++ RQTL+F+AT P+
Sbjct: 178 GRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQTLLFSATLPQ 237
Query: 421 EVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQ-EPGSKI 479
+ A L +P V + ++ + + + + EK L ++R + +
Sbjct: 238 ALADFAKAGLRDPQIVRLDLDKKISPDLKLAFFT--LRQEEKLAALLYLVRERISSEEQT 295
Query: 480 IIFCSTKRMCDQLARNLARQYGA--SAIHGDKSQAERDSVLSEFRSGRCPILVATDVAAR 537
IIF STK + L L R+ G S +G Q R+ +S+FR+ + IL+ TDVAAR
Sbjct: 296 IIFVSTKHHVEFL-NILFREEGLEPSLSYGAMDQEARNIHISKFRARKTMILIVTDVAAR 354
Query: 538 GLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDL 590
GLDI + VVN+DFP + +VHR+ AYTF +D Y DL
Sbjct: 355 GLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAYLLDL 407
>Os03g0669000 Similar to RNA helicase (Fragment)
Length = 472
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 183/318 (57%), Gaps = 11/318 (3%)
Query: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVL 309
G+ PT IQA++ P AL RD++ + +TGSGKT + +P I+ L+ + VL
Sbjct: 60 GWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALP--IIQALLKQDKPQALFACVL 117
Query: 310 SPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDIL- 368
SPTRELA QI + + G + +S L GG + Q L + IVV TPGRL D L
Sbjct: 118 SPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIVVGTPGRLLDHLT 177
Query: 369 EMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASD 428
+ + SL+++ YLVLDEAD++L++ F+ + I+ + +R+T +F+AT +V K+
Sbjct: 178 DTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERRTFLFSATMTNKVSKLQRA 237
Query: 429 LLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIF---CST 485
L NPV+V + + V ++ Q + K L +L ++ PGS I+IF C +
Sbjct: 238 CLRNPVKVEVASKYSTV--DTLRQEFYFVPADYKDCFLVHVL-NELPGSMIMIFVRTCES 294
Query: 486 KRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIR 545
R+ RNL ++ A +I G SQ +R L+ F++ C IL+ TDVA+RGLDI+ +
Sbjct: 295 TRLLALTLRNL--RFKAISISGQMSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGVD 352
Query: 546 VVVNYDFPTGVEDYVHRI 563
VV+NYD P +DYVHR+
Sbjct: 353 VVINYDIPMNSKDYVHRV 370
>Os07g0647900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 540
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 186/354 (52%), Gaps = 15/354 (4%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPT 305
+ + GF PTPIQ Q+ PI L R+ A A TGSGKTL +L P +L +++ S++G
Sbjct: 161 LSKLGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFP---ILMKIKPGSKEGVK 217
Query: 306 VLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLN 365
++L PTRELA Q E KK + + + K +D+ DI+++TP RL+
Sbjct: 218 AVILCPTRELAAQTTRECKKLAKGRKFYIKLMTKDLSKSGNFKDMH--CDILISTPLRLD 275
Query: 366 DILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQV-QPKRQTLMFTATWPKEVRK 424
++ R + L +V YLVLDE+D++ ++GF I +VK P +F+AT P +
Sbjct: 276 HAVQKRDLDLSRVEYLVLDESDKLFELGFVEVIDSVVKACSNPSIIRSLFSATLPDSIET 335
Query: 425 IASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILR---SQEPGSKIII 481
+A ++ + V+V +G + A+ I Q + + EK + L LR ++ ++I
Sbjct: 336 LARTIMHDAVRVIVGRKNS--ASSLIKQKL-IFAGTEKGKLL--ALRQSFAESLNPPVLI 390
Query: 482 FCSTKRMCDQLARNLA-RQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLD 540
F +K +L + LA A IH D + +R + R+G+ +L+AT+V ARG+D
Sbjct: 391 FVQSKERAKELYKELAFDDVRADVIHADLDEEQRQDAVDNLRAGKTWVLIATEVIARGMD 450
Query: 541 IKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLVKIL 594
K + V+NYDFP Y+HRI A TFF ++D + ++ +L
Sbjct: 451 FKGVNCVINYDFPESASAYIHRIGRSGRAGRSGEAITFFTEEDKPFLRNIANVL 504
>Os02g0641800 Similar to RNA helicase (Fragment)
Length = 483
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 179/328 (54%), Gaps = 9/328 (2%)
Query: 237 LFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRL 296
K + + + + GF P+PIQ +S PIAL DI+A AK G+GKT + IP L+++
Sbjct: 115 FLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA---LEKI 171
Query: 297 QHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADI 356
++ V++L PTRELA Q K+ G+ +I + GG + L + +
Sbjct: 172 DQ-EKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHL 230
Query: 357 VVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTA 416
+V TPGR+ D+ + L S L++DEAD++L F+P + ++++ + RQ LMF+A
Sbjct: 231 LVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSA 290
Query: 417 TWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPG 476
T+P V++ L P +N+ D+L K ITQ+ + +K L+ + S+
Sbjct: 291 TFPVTVKEFKDKYLPKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-SKLQI 346
Query: 477 SKIIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVA 535
++ IIFC++ + LA+ + Y IH Q R+ V +FR+G C LV TD+
Sbjct: 347 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 406
Query: 536 ARGLDIKDIRVVVNYDFPTGVEDYVHRI 563
RG+DI+ + VV+N+DFP E Y+HR+
Sbjct: 407 TRGIDIQAVNVVINFDFPKTAETYLHRV 434
>Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 188/364 (51%), Gaps = 22/364 (6%)
Query: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQ--HNSRDGPTVL 307
GF P+ IQ ++ + RD++A A++G+GKT I L Q + L
Sbjct: 50 GFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKT------SMISLSVCQIVDTAVREVQAL 103
Query: 308 VLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDI 367
+LSPTRELA Q + G I GG G +R LE G +V TPGR+ D+
Sbjct: 104 ILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDM 163
Query: 368 LEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIAS 427
++ R + + L+LDEAD ML GF+ QI + + + P+ Q + +AT P E+ ++ S
Sbjct: 164 IKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTS 223
Query: 428 DLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQI--LRSQEPGSKIIIFCST 485
+++PV++ + D+L + I Q+ + E + D + L ++ +IFC+T
Sbjct: 224 KFMTDPVRILV-KRDELTL-EGIKQFFVAVEKEEW--KFDTLCDLYDTLTITQAVIFCNT 279
Query: 486 KRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDI 544
KR D L + + + SA+HGD Q ERD+++ EFRSG +L+ TDV ARGLD++ +
Sbjct: 280 KRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQV 339
Query: 545 RVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLVKILEGANQSVSQQ 604
+V+NYD P E Y+HRI VA F +D ++IL Q S Q
Sbjct: 340 SLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKED-------IRILRDIEQYYSTQ 392
Query: 605 LRDM 608
+ +M
Sbjct: 393 IDEM 396
>Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 189/364 (51%), Gaps = 22/364 (6%)
Query: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQ--HNSRDGPTVL 307
GF P+ IQ ++ + RD++A A++G+GKT I L Q + L
Sbjct: 50 GFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKT------SMISLSVCQIVDTAVREVQAL 103
Query: 308 VLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDI 367
+LSPTRELA Q + G I GG G +R LE G +V TPGR+ D+
Sbjct: 104 ILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDM 163
Query: 368 LEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIAS 427
++ R + + L+LDEAD ML GF+ QI + + + P+ Q + +AT P E+ ++ S
Sbjct: 164 IKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTS 223
Query: 428 DLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQI--LRSQEPGSKIIIFCST 485
+++PV++ + D+L + I Q+ + ++ + D + L ++ +IFC+T
Sbjct: 224 KFMTDPVRILV-KRDELTL-EGIKQF--FVAVEKEEWKFDTLCDLYDTLTITQAVIFCNT 279
Query: 486 KRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDI 544
KR D L + + + SA+HGD Q ERD+++ EFRSG +L+ TDV ARGLD++ +
Sbjct: 280 KRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQV 339
Query: 545 RVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLVKILEGANQSVSQQ 604
+V+NYD P E Y+HRI VA F +D ++IL Q S Q
Sbjct: 340 SLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKED-------IRILRDIEQYYSTQ 392
Query: 605 LRDM 608
+ +M
Sbjct: 393 IDEM 396
>AK068197
Length = 181
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 125/167 (74%), Gaps = 2/167 (1%)
Query: 374 SLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNP 433
+L +V+YLVLDEADRMLDMGFEPQIRKIV Q++P RQTL ++ATWP+EV +A L NP
Sbjct: 4 NLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNP 63
Query: 434 VQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQLA 493
+V IG+ D L AN SI Q ++VI+ EK RL ++L GS+I+IF TK+ CD++
Sbjct: 64 YKVIIGSPD-LKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVT 122
Query: 494 RNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGL 539
R L + A +IHGDK+QAERD VL+EF+SG+ PI+ ATDVAARGL
Sbjct: 123 RQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGL 169
>Os10g0503700 Similar to RNA helicase (Fragment)
Length = 521
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 171/328 (52%), Gaps = 9/328 (2%)
Query: 237 LFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRL 296
K + + + + GF P+PIQ +S PIAL DI+A AK G+GKT + IP L+++
Sbjct: 153 FLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA---LEKI 209
Query: 297 QHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADI 356
++ V++L PTRELA Q K+ G+ I + GG + L + +
Sbjct: 210 D-PEKNAIQVVILVPTRELALQTSQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQPVHL 268
Query: 357 VVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTA 416
+V TPGR+ D+ L S LV+DEAD++L F+P I +++ + RQ LMF+A
Sbjct: 269 LVGTPGRILDLTRKGICVLKDCSMLVMDEADKLLAPEFQPSIEQLIHFLPANRQLLMFSA 328
Query: 417 TWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPG 476
T+P V+ L P +N+ D+L K ITQY + +K L+ + +
Sbjct: 329 TFPVTVKDFKEKYLPRPYVINL--MDELTL-KGITQYYAFVEERQKVHCLNTLFLKLQIN 385
Query: 477 SKIIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVA 535
IIFC++ + LA+ + Y IH Q R+ V +FR+G C LV TD+
Sbjct: 386 QS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 444
Query: 536 ARGLDIKDIRVVVNYDFPTGVEDYVHRI 563
RG+ I+ + VV+N+DFP E Y+HR+
Sbjct: 445 TRGIGIQAVNVVINFDFPKTSETYLHRV 472
>Os12g0481100 Similar to RNA helicase
Length = 832
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 193/372 (51%), Gaps = 21/372 (5%)
Query: 230 LDVHLSRLFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPG 289
L+++LSR + + G+ PTPIQA P+AL RDI A TGSGKT + +P
Sbjct: 227 LELNLSR----PLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLP- 281
Query: 290 FILLKRLQHNSRDGPT--VLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQL 347
+L+RL + P VL+L+PTRELA Q+ +K + + I + GG Q
Sbjct: 282 --VLERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQE 339
Query: 348 RDLERGADIVVATPGRLNDILEMR-RVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQ 406
L DIVVATPGR+ D L V L ++ L+LDEADR+L++GF +I+++++
Sbjct: 340 VALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQELIRMCP 399
Query: 407 PKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRL 466
+RQT++F+AT +E+ ++ + L+ PV++ + L ++T+ V I ++R
Sbjct: 400 RRRQTMLFSATMTEEINELVTLSLNKPVRLEADPS--LKRPATLTEEVVRI---RRAREA 454
Query: 467 DQ-----ILRSQEPGSKIIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSE 520
+Q L + K+IIF TK +L A+ +HG+ +QA+R L
Sbjct: 455 NQEAVLLALCLKTFKDKVIIFSGTKHSAHRLKIIFGLSGMKAAELHGNLTQAQRLEALEL 514
Query: 521 FRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFC 580
F+ L+ATDVAARG+DI +R V+N+ P Y+HR+ A TF
Sbjct: 515 FKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGREGYAVTFVT 574
Query: 581 DQDSKYASDLVK 592
D D + K
Sbjct: 575 DDDRSLLKAIAK 586
>Os01g0618500 Similar to RNA helicase (Fragment)
Length = 536
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 182/330 (55%), Gaps = 16/330 (4%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPT 305
++ AG+ T +Q + PI L+ D++A AKTG+GKT+ +L+P LL L + P+
Sbjct: 89 IKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLPRS----PS 144
Query: 306 V--LVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQ-LRDLERG-ADIVVATP 361
+ LV+ PTRELA Q+ EA+K + R V + G K PQ R ++ I+VATP
Sbjct: 145 INLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGGTKLPQEQRSMQSNPCQILVATP 204
Query: 362 GRLNDILEMR---RVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATW 418
GRL D LE + V LVLDEADR+LDMGF I KI+ + +RQTL+F+AT
Sbjct: 205 GRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDIEKIIAFIPKERQTLLFSATV 264
Query: 419 PKEVRKIASDLLSNPVQ-VNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILR---SQE 474
P+EVR+I+ + + +N + ++Q V L +L+ +++
Sbjct: 265 PEEVRQISHIAMKRGYKFINTVKEGDEETHSQVSQMYMVAPLDLHFSILYNVLKKHIAED 324
Query: 475 PGSKIIIFCSTKRMCDQLARNLAR-QYGASAIHGDKSQAERDSVLSEFRSGRCPILVATD 533
K+I+FC+T + +A L++ + IH KSQ+ R V EFR + ILV++D
Sbjct: 325 ADYKVIVFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSARTKVSDEFRKSKGLILVSSD 384
Query: 534 VAARGLDIKDIRVVVNYDFPTGVEDYVHRI 563
V+ARG+D D+ +V+ P E Y+HR+
Sbjct: 385 VSARGVDYPDVTLVIQVGLPADREQYIHRL 414
>Os01g0618400 Similar to RNA helicase (Fragment)
Length = 594
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 185/332 (55%), Gaps = 14/332 (4%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDG-- 303
V+ AG+ T +Q + P+ L+ +D++A AKTG+GKT+ +L+P +L L ++ RD
Sbjct: 141 VKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLR 200
Query: 304 PTV--LVLSPTRELATQIQDEAKKFGRSSRISSV-CLYGGAPKGPQLRDLERG-ADIVVA 359
P++ LV+ PTRELA Q+ EAKK + R V + GG + R ++ I+VA
Sbjct: 201 PSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGGTRLTQEQRSMQANPCQILVA 260
Query: 360 TPGRLNDILEMR---RVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTA 416
TPGRL D +E L V LVLDEADR+LDMGF I +I+ V +RQTL+F+A
Sbjct: 261 TPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDIERIIASVPKERQTLLFSA 320
Query: 417 TWPKEVRKIASDLLSNPVQ-VNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILR---S 472
T P+EVR+I+ + + +N + ++Q + L +L+ +
Sbjct: 321 TVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQVSQMFMIAPLDLHFSILYDVLKKHVA 380
Query: 473 QEPGSKIIIFCSTKRMCDQLARNLAR-QYGASAIHGDKSQAERDSVLSEFRSGRCPILVA 531
++ K+IIFC+T + +A L++ + IH KSQ+ R V EFR R ILV+
Sbjct: 381 EDADYKVIIFCTTAMVTKLVAEILSQLRLNIREIHSRKSQSARTKVSDEFRKSRGLILVS 440
Query: 532 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 563
+DV+ARG+D D+ +V+ P + Y+HR+
Sbjct: 441 SDVSARGVDYPDVTLVIQVGVPADRQQYIHRL 472
>Os02g0146600 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 11/344 (3%)
Query: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVL 309
GF P+ IQ + + D++ A++G+GKT + +L++L + + + LVL
Sbjct: 60 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG---ILQQLDYGLVECQS-LVL 115
Query: 310 SPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILE 369
+PTRELA QI+ + G + GG R L G +VV TPGR+ D+L
Sbjct: 116 APTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLR 175
Query: 370 MRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDL 429
+ + + VLDEAD ML GF+ QI I + + PK Q +F+AT P E +I
Sbjct: 176 RQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKF 235
Query: 430 LSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQI--LRSQEPGSKIIIFCSTKR 487
++ PV++ + D+L YV+V ++ +LD + L ++ +IF +T+R
Sbjct: 236 MNKPVRILV-KRDELTLEGIKQFYVNV---EKEDWKLDTLCDLYETLAITQSVIFVNTRR 291
Query: 488 MCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRV 546
D L + +R + SA HGD Q RD ++ EFRSG +L+ TD+ ARG+D++ + +
Sbjct: 292 KVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 351
Query: 547 VVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDL 590
V+NYD PT E+Y+HRI VA F D + D+
Sbjct: 352 VINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 395
>Os07g0633500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 501
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 185/364 (50%), Gaps = 22/364 (6%)
Query: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVL 309
G PT +Q + P AL RD++ +A+TGSGKT + +P +L RL + G L L
Sbjct: 96 GMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALP---ILHRLGEDPY-GVAALAL 151
Query: 310 SPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRL----N 365
+PTRELA Q+ ++ + G + + GG Q + L R +VVATPGR+ N
Sbjct: 152 APTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLIN 211
Query: 366 DILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKI 425
D ++ +V + +LVLDEADR+LD+ FE +R I + KRQT +F+AT +R +
Sbjct: 212 DDPDLAKV-FARTKFLVLDEADRVLDINFEEDLRVIFGSLPKKRQTFLFSATISDNLRSL 270
Query: 426 ASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQIL--RSQEPGSKIIIFC 483
LS + ++ Q + P K L +L +++ +I+F
Sbjct: 271 LE--LSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYLFYLLSKMNEDNIRSVIVFV 328
Query: 484 STKRMCDQLARNLARQYG--ASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDI 541
ST R C Q L + G A ++H K Q+ R + L F+S + P+L+ATDVA+RGLDI
Sbjct: 329 STCRTC-QYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGLDI 387
Query: 542 KDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLVKILEGANQSV 601
+ + +V+NYD P DY+HR+ ++ +F Q +++L V
Sbjct: 388 QTVDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITTQRD------IRLLHEIEDVV 441
Query: 602 SQQL 605
+QL
Sbjct: 442 GKQL 445
>Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 175/344 (50%), Gaps = 11/344 (3%)
Query: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVL 309
GF P+ IQ + + D++ A++G+GKT + +L++L + + LVL
Sbjct: 60 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG---ILQQLDYAVVECQA-LVL 115
Query: 310 SPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILE 369
+PTRELA QI+ + G + GG R L G +VV TPGR+ D+L
Sbjct: 116 APTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLR 175
Query: 370 MRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDL 429
+ + + VLDEAD ML GF+ QI I + + K Q +F+AT P E +I
Sbjct: 176 RQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKF 235
Query: 430 LSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQI--LRSQEPGSKIIIFCSTKR 487
++ PV++ + D+L YV+V ++ +LD + L ++ +IF +T+R
Sbjct: 236 MNKPVRILV-KRDELTLEGIKQFYVNV---EKEEWKLDTLCDLYETLAITQSVIFVNTRR 291
Query: 488 MCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRV 546
D L + R + SA HGD Q RD ++ EFRSG +L+ TD+ ARG+D++ + +
Sbjct: 292 KVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 351
Query: 547 VVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDL 590
V+NYD PT E+Y+HRI VA F D + D+
Sbjct: 352 VINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 395
>Os01g0184500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 625
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 172/345 (49%), Gaps = 33/345 (9%)
Query: 242 IYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKR------ 295
+ + + G S PT IQ P L +V + TGSGKTL YL+P LL+R
Sbjct: 121 VMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLG 180
Query: 296 LQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGAD 355
+ R P +VL PTREL Q+ AK +R S + GG+ PQ L D
Sbjct: 181 MSMKPRR-PRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVD 239
Query: 356 IVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKR------ 409
+VV TPGR+ D ++ + + YLVLDEAD M D GF P IRK + ++ +
Sbjct: 240 MVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQ 299
Query: 410 --QTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLD 467
QT++ TAT K V+K+ + V + + VA T D I +L+
Sbjct: 300 GFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVA----TARHDFIKLSGSENKLE 355
Query: 468 QILRSQEP----GSKIIIFCST---KRMCDQ-LARNLARQYGASAIHGDKSQAERDSVLS 519
+L+ EP G+K+++FC+T R D L N Q HG+ ER L+
Sbjct: 356 ALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTEN---QISTVNYHGEVPAEERVENLN 412
Query: 520 EFRS--GRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 562
+FR+ G CP LV TD+AARGLD+ D+ V+ +DFP+ DY+HR
Sbjct: 413 KFRNEEGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHR 456
>Os01g0164500 Similar to ATP-dependent RNA helicase-like protein
Length = 647
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 195/368 (52%), Gaps = 25/368 (6%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPT 305
++ GF TP+QA + P+ L ++D+ A TGSGKTL +++P +L+R +
Sbjct: 38 LKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEV 97
Query: 306 V-LVLSPTRELATQIQDEAKKFGRSSR-ISSVCLYGGAPKGPQLRDLER-GADIVVATPG 362
+ +++SPTREL++QI + A+ F + + +SS+ L GG +L+ LE GA+I+V TPG
Sbjct: 98 LGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPG 157
Query: 363 RLNDILE-MRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKE 421
+L D++E + ++ + L+LDEADR+LD+GF+ QI I+ ++ R+T +F+AT +
Sbjct: 158 KLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLRRTGLFSATQTEA 217
Query: 422 VRKIASDLLSNPVQVNI----------GNTDQLVANKS----ITQYVDVITPPEKSRRLD 467
V+++A L NPV+V + G +L +K+ +Y+ + KS +L
Sbjct: 218 VKELAKAGLRNPVRVEVKTEVKPTGKDGAQQELGPSKTPLGLRLEYM-ICEASNKSSQLV 276
Query: 468 QILRSQEPGSKIIIFCSTKRMCD--QLARNLARQYGASAI---HGDKSQAERDSVLSEFR 522
L Q G KI+++ +T D + L S I HG Q R+ L+ F
Sbjct: 277 DFL-VQNNGKKIMVYFATCACVDYWAIVLPLLDSLKGSPIIPYHGKMKQGPREKALASFS 335
Query: 523 SGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQ 582
+ ILV TDVAARGLDI + ++V YD P ++HR A F +
Sbjct: 336 ALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPK 395
Query: 583 DSKYASDL 590
+ Y L
Sbjct: 396 EDTYVEFL 403
>Os01g0549700 Similar to RNA helicase (Fragment)
Length = 432
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 180/347 (51%), Gaps = 12/347 (3%)
Query: 237 LFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRL 296
L K + +Q GF P+ +Q + P A+ D++ AK+G GKT F+L
Sbjct: 57 LLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKT-----AVFVLSSLQ 111
Query: 297 QHNSRDGPT-VLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGA- 354
Q + G LVL TRELA QI E ++F + V ++ G + +DL +
Sbjct: 112 QIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDC 171
Query: 355 -DIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLD-MGFEPQIRKIVKQVQPKRQTL 412
IVV TPGR+ + + +SL V + +LDE D+MLD + +++I K +Q +
Sbjct: 172 PHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVM 231
Query: 413 MFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRS 472
MF+AT KE+R + + +P+++ + + +L + + Y+ ++ EK+R+L+ +L +
Sbjct: 232 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK-LSEAEKNRKLNDLLDA 290
Query: 473 QEPGSKIIIFCSTKRMCDQLARNLAR-QYGASAIHGDKSQAERDSVLSEFRSGRCPILVA 531
+ ++++IF + +L + L + A +IH +Q ER + F+ G ILVA
Sbjct: 291 LD-FNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVA 349
Query: 532 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTF 578
TD+ RG+DI+ + +V+NYD P + Y+HR+ +A TF
Sbjct: 350 TDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITF 396
>Os01g0550000 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 432
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 180/347 (51%), Gaps = 12/347 (3%)
Query: 237 LFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRL 296
L K + +Q GF P+ +Q + P A+ D++ AK+G GKT F+L
Sbjct: 57 LLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKT-----AVFVLSSLQ 111
Query: 297 QHNSRDGPT-VLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERG-- 353
Q + G LVL TRELA QI E ++F + V ++ G + +DL +
Sbjct: 112 QIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDC 171
Query: 354 ADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLD-MGFEPQIRKIVKQVQPKRQTL 412
IVV TPGR+ + + +SL V + +LDE D+MLD + +++I K +Q +
Sbjct: 172 PHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVM 231
Query: 413 MFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRS 472
MF+AT KE+R + + +P+++ + + +L + + Y+ ++ EK+R+L+ +L +
Sbjct: 232 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK-LSEAEKNRKLNDLLDA 290
Query: 473 QEPGSKIIIFCSTKRMCDQLARNLAR-QYGASAIHGDKSQAERDSVLSEFRSGRCPILVA 531
+ ++++IF + +L + L + A +IH +Q ER + F+ G ILVA
Sbjct: 291 LD-FNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVA 349
Query: 532 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTF 578
TD+ RG+DI+ + +V+NYD P + Y+HR+ +A TF
Sbjct: 350 TDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITF 396
>Os02g0826100 Similar to RNA helicase (Fragment)
Length = 811
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 169/330 (51%), Gaps = 16/330 (4%)
Query: 249 AGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGF--ILLKRLQH-NSRDGPT 305
AG+ T +Q + P+ L +D++ AKTG+GK+ +L+P +L H N R P
Sbjct: 360 AGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPI 419
Query: 306 V-LVLSPTRELATQIQDEAKKFGRSSR-ISSVCLYGGAPKGPQLRDLERG-ADIVVATPG 362
L+L PTRELA Q+ EA + + I L GG R LE I+VATPG
Sbjct: 420 FSLILCPTRELAIQLTAEANVLLKYHQGIGVQSLIGGTRFKLDQRRLESDPCQILVATPG 479
Query: 363 RLNDILEMRR---VSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWP 419
RL D +E + V L + LVLDEAD +LD+GF I KIV + +RQTL+F+AT P
Sbjct: 480 RLLDHIENKSSFSVRLMGLKLLVLDEADHLLDLGFRTDIEKIVDSLPRQRQTLLFSATIP 539
Query: 420 KEVRKIASDLLS-NPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRS---QEP 475
KEVR+++ +L + V V+ + + Q V+ + ++LR QE
Sbjct: 540 KEVRRVSQLVLKRDHVFVDTVGLGAVETPTKVEQLYLVMPHELHFHMVYRLLREHIDQEV 599
Query: 476 GSKIIIFCSTKRMCDQLARNLAR--QYGASAIHGDKSQAERDSVLSEFRSGRCPILVATD 533
K+I+FC+T M + + R + IH K Q R + EFR ILV +D
Sbjct: 600 DYKVIVFCTTA-MVTEFMYIMLRDLKLNVREIHSRKPQLYRTRISEEFRDSSRLILVTSD 658
Query: 534 VAARGLDIKDIRVVVNYDFPTGVEDYVHRI 563
V+ RG++ + +V+ P+ E Y+HR+
Sbjct: 659 VSTRGVNYPGVTLVIQVGVPSDREHYIHRL 688
>Os07g0143700 Similar to DEAD-Box RNA helicase-like protein
Length = 329
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 133/207 (64%), Gaps = 10/207 (4%)
Query: 242 IYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR 301
I ++ G + PIQ A++ +D++ A+TG+GKTL + IP I+ + L+HN +
Sbjct: 94 IVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIP--IMDRILRHNEK 151
Query: 302 DG----PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIV 357
+G P ++L+PTRELA Q++ K+F S+ + S+C+YGG P Q+R L G D+V
Sbjct: 152 NGSGRNPLAIILAPTRELARQVE---KEFKESAPLDSLCVYGGVPISHQMRALNYGVDVV 208
Query: 358 VATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTAT 417
V TPGR+ D+L ++L ++ ++VLDEAD+ML +GF+ + I++ + RQ+++F+AT
Sbjct: 209 VGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSAT 268
Query: 418 WPKEVRKIASDLLSNPVQVN-IGNTDQ 443
P +RKI S L +P+ ++ +G+ DQ
Sbjct: 269 MPSWIRKITSKYLKDPIIIDLVGDEDQ 295
>Os05g0110500 Similar to RNA helicase (Fragment)
Length = 591
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 196/420 (46%), Gaps = 82/420 (19%)
Query: 248 QAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLK----RLQHNSRDG 303
+ GF APT IQAQ+ P+A+ + ++ A TG+GKTL YL P LL+ R++ DG
Sbjct: 41 KMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERT--DG 98
Query: 304 PTVLVLSPTRELATQIQDEAKKF-GRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPG 362
LVL PTREL Q+ A++ R + + GG + + L +G I++ATPG
Sbjct: 99 TFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPG 158
Query: 363 RLNDILEMRRVSLH-QVSYLVLDEADRMLDMGFEPQIRKIVK--------------QVQP 407
RL D L+ ++ + ++V DEAD +L++GF + I++ +++P
Sbjct: 159 RLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEP 218
Query: 408 -KRQTLMFTATWPKEVRKIASDLLSNPVQVNI---------GNTDQLVA----------N 447
KRQ L+ +AT ++V ++A L NPV + + N L++ N
Sbjct: 219 MKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTSLLSDDEEEILEKHN 278
Query: 448 KSITQYVDVITPPEK-----------SRR--LDQILRS---QEPGSKIIIFCSTKRMCD- 490
++ Q VD P + SR L IL+S ++ K+++F ST CD
Sbjct: 279 VTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLST---CDS 335
Query: 491 -----------------QLARNLARQYGASAI---HGDKSQAERDSVLSEFRSGRCPILV 530
QL + +++ + + HG+ Q +R F S + ILV
Sbjct: 336 VDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILV 395
Query: 531 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDL 590
+TDVAARGLD ++ ++ YD P +YVHR+ A F ++ Y DL
Sbjct: 396 STDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDL 455
>Os04g0510400 Similar to RNA helicase (Fragment)
Length = 832
Score = 146 bits (368), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 177/394 (44%), Gaps = 78/394 (19%)
Query: 242 IYVKVQQAGFSAPTPIQAQSWPIAL-RNRDIVAVAKTGSGKTLGYLIPGFILLKRL---- 296
+ V++ GF PTPIQ +P A + +D++ A+TGSGKTL + +P +L+RL
Sbjct: 209 LITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLP---ILQRLLEEQ 265
Query: 297 --------------QHNSRDGPT-VLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGA 341
NSR+ P L+L+PTRELA Q+ D K+ + RI V + GG
Sbjct: 266 EKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGL 325
Query: 342 PKGPQLRDLERGADIVVATPGRLNDIL---EMRRVSLHQVSYLVLDEADRMLDMGFEPQI 398
Q R L+R +IVV TPGRL +++ + LH +S+ VLDEADRM++ G ++
Sbjct: 326 SMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHEL 385
Query: 399 RKIVKQVQ------------------------PKRQTLMFTATWPKEV---RKIASDLLS 431
+ I++ + KRQT +F+AT +K+ L++
Sbjct: 386 QSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSANFRKKLKRGLVT 445
Query: 432 NPVQVN--------IGNTDQLVANKSITQYVDVITPPEKSRR-------------LDQIL 470
+ + ++ N I PEK L IL
Sbjct: 446 AKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIECSDDDKDAYLYYIL 505
Query: 471 RSQEPGSKIIIFCSTKRMCDQLARNLARQYGASAI--HGDKSQAERDSVLSEFRSGRCPI 528
G + IIFC++ L+ ++ R G + + H Q R + FR I
Sbjct: 506 SVHGQG-RTIIFCTSIAALRHLS-SILRVLGINVLTNHAQMQQRARMKAVDRFRESENSI 563
Query: 529 LVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHR 562
LVATD ARG+D D+R V++Y P + Y+HR
Sbjct: 564 LVATDGFARGMDFDDVRTVIHYQLPHSTDVYIHR 597
>Os06g0697200 DEAD/DEAH box helicase domain containing protein
Length = 308
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 130/245 (53%), Gaps = 6/245 (2%)
Query: 366 DILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKI 425
D L + LH YL LDEADR++D+GFE IR++ + +RQTL+F+AT P++++
Sbjct: 7 DYLNVLNNFLHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNF 66
Query: 426 ASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCST 485
A L P+ VN+G AN + Q V+ + + L + L+ P +++FC
Sbjct: 67 AKSALVKPIIVNVGRAG--AANLDVIQEVEYVKEEARIIYLLECLQKTPP--PVLVFCEH 122
Query: 486 KRMCDQLARNLA-RQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDI 544
K D + L + A AIHG K ER F++ +LVATDVA++GLDI DI
Sbjct: 123 KADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDI 182
Query: 545 RVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFC-DQDSKYASDLVKILEGANQSVSQ 603
+ V+NYD P +E+YVHRI VA TF +Q DL ++L + Q +
Sbjct: 183 QHVINYDMPAEIENYVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRLPP 242
Query: 604 QLRDM 608
L D+
Sbjct: 243 ILADL 247
>Os03g0219700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 172/374 (45%), Gaps = 56/374 (14%)
Query: 245 KVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQH------ 298
++ + G S PT +Q+ + PI + D V + TGSGKTL YL+P + L+
Sbjct: 145 RLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDG 204
Query: 299 -NSRDGPTVLVLSPTRELATQIQDEAKK-FGRSSRISSVCLYGGAPKGPQLRDLERGAD- 355
+ R G ++++P+REL QI E +K G + + L GGA + Q L++
Sbjct: 205 SDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPL 264
Query: 356 IVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPK------- 408
IVV TPGR+++I ++ H +LVLDE D++L + + +I++ V K
Sbjct: 265 IVVGTPGRISEISAGGKLHTHGCRFLVLDEVDQLLSFNYREDMHRILEHVGRKSGTSSRD 324
Query: 409 ----------RQTLMFTATWPKEVRKIASDLLSNPVQVN----------------IGNTD 442
RQT++ +AT P V + A +PV V + TD
Sbjct: 325 ILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLDSITVPRPVLSQTD 384
Query: 443 -----------QLVANK---SITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRM 488
Q N S+ Y + K L + + + E + I +TK +
Sbjct: 385 ANPNSPSNSVNQAAVNSLPPSLEHYYCISKAQHKVDTLRRCIHALEAQTVIAFMNNTKPL 444
Query: 489 CDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVV 548
D + + AR A+ +HGD + R +VL +F+ G +LV +++ARGLD+ + +V+
Sbjct: 445 KDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELSARGLDVPECDLVI 504
Query: 549 NYDFPTGVEDYVHR 562
N D PT Y HR
Sbjct: 505 NLDLPTDSTHYAHR 518
>Os02g0636300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 176/377 (46%), Gaps = 62/377 (16%)
Query: 245 KVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQH------ 298
++ + G +APT +Q+ + PI + D V + TGSGKTL YL+P + L+
Sbjct: 145 RLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDS 204
Query: 299 -NSRDGPTVLVLSPTRELATQIQDEAKK-FGRSSRISSVCLYGGAPKGPQLRDLERGADI 356
+ R G ++++P+REL QI E +K G + + L GGA + Q L++ I
Sbjct: 205 SDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPI 264
Query: 357 -VVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPK------- 408
VV TPGR+++I ++ H +LVLDE D++L + + +I++ V K
Sbjct: 265 IVVGTPGRISEISAAGKLHTHSCRFLVLDEVDQLLSFNYREDMHRILEHVGRKSGTSSRD 324
Query: 409 ----------RQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVIT 458
RQT++ +AT P V + A +PV V + +V +SIT V++
Sbjct: 325 ILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMS---VVPLESITVPRPVLS 381
Query: 459 PPE---------------------------------KSRRLDQILRSQEPGSKIIIFCST 485
P+ K L + + + E + I +T
Sbjct: 382 QPDANSNSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKVDTLRRCIHALEAQTVIAFMNNT 441
Query: 486 KRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIR 545
K + D + + AR A+ +HGD + R +VL +F+ G +LV +++ARGLD+ +
Sbjct: 442 KPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELSARGLDVPECD 501
Query: 546 VVVNYDFPTGVEDYVHR 562
+V+N D PT Y HR
Sbjct: 502 LVINLDLPTDSTHYAHR 518
>Os12g0611200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 157
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
Query: 304 PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGR 363
P +VL+PTRELA Q++ E F SS + ++C+YGG P Q+R L G D+V+ TPGR
Sbjct: 11 PLAIVLAPTRELAKQVERE---FSDSSNVETICVYGGTPISQQIRQLNYGVDVVIGTPGR 67
Query: 364 LNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVR 423
+ D+L+ ++L +V ++VLDEAD+ML +GF+ + I+ +V PKRQTLMF+AT P ++
Sbjct: 68 VIDLLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETILDRVPPKRQTLMFSATMPTWIQ 127
Query: 424 KIASDLLSNPVQVNI 438
++ L NPV +++
Sbjct: 128 RLTQKYLKNPVTIDL 142
>Os06g0535100 Similar to Helicase pitchoune (Fragment)
Length = 500
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPT 305
++ ++ T IQA+S P + D++A AKTGSGKTL +LIP LL RL+ + R+G
Sbjct: 101 IRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRNGTG 160
Query: 306 VLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLN 365
V+VL PTRELA Q + AK+ R + + GG + L +G +++VATPGRL
Sbjct: 161 VIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQLAKGINVLVATPGRLL 220
Query: 366 DILEMRRVSLHQ-VSYLVLDEADRMLDMGFEPQIRKIVKQV-QPKRQTLMFTATWPKEVR 423
D ++ + ++ + L++DEADR+L+ FE Q+++I K + + RQT++F+AT ++V
Sbjct: 221 DHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGRQTVLFSATQTEKVE 280
Query: 424 KIA 426
A
Sbjct: 281 DFA 283
>Os03g0108600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 653
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 163/342 (47%), Gaps = 31/342 (9%)
Query: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKR-----LQHNSRDGP 304
GF P+ IQA ++ L + + ++GSGKTL YL P L++ L +S P
Sbjct: 271 GFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNP 330
Query: 305 TVLVLSPTRELATQIQDEAKKFGRSSR-ISSVCLYGGAPKGPQLRDLERGADIVVATPGR 363
V+VL+PT ELA+Q+ + + +S S+ GG + QL L++ D+++ATPGR
Sbjct: 331 RVVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGR 390
Query: 364 LNDILEMRRVSLHQVSYLVLDEADRML-DMGFEPQIRKIVKQVQPKRQTLMFTATWPKEV 422
+L+ V L+ + +VLDE D + + FE + +++ Q L TAT P ++
Sbjct: 391 FLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLITVAPLTTQYLFVTATLPLDI 450
Query: 423 -RKIA-----SDLLSNP-VQVNIGNTDQLVANKSITQYVDVITPPE-----KSRRLDQIL 470
K+ +L+ P V ++++ + S + PE K L +I+
Sbjct: 451 YNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEE--KNPETAFSNKKSALVKII 508
Query: 471 RSQEPGSKIIIFCSTKRMCDQLARNLAR------QYGASAIHGDKSQAERDSVLSEF--- 521
+ P K IIFC+ C ++ L R Q H Q +R + + EF
Sbjct: 509 -EESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHAALDQQQRIANIKEFLNK 567
Query: 522 RSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 563
++ LV TD A+RG+D ++ VV +D+P +YV R+
Sbjct: 568 QTADSMFLVCTDRASRGIDFANVNHVVLFDYPRDPSEYVRRV 609
>Os03g0728800 Similar to RNA helicase (Fragment)
Length = 670
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 164/365 (44%), Gaps = 48/365 (13%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR---D 302
+++ G TPIQ ++ P+ L +D+VA AKTGSGKT YL+P L +L R
Sbjct: 107 LRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPMLHELLKLSAEGRIRKS 166
Query: 303 GPTVLVLSPTRELATQIQDEAKKFGR--SSRISSVCLYGGAPKGPQLRDLERGADIVVAT 360
P V +L PTREL Q+ +EA +S++ V + L +I+V T
Sbjct: 167 APNVFILVPTRELCQQVHNEASSLLEFCTSKLKVVQVNASMSDKDIKVALSGPPNILVTT 226
Query: 361 PGRLNDILE---MRRVSLHQ-VSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTA 416
P + + +R S+ + +S ++LDEAD +L E I+ +V + Q+++ +A
Sbjct: 227 PACVASCISKGIIRGSSIKESLSMMILDEADLLLSYRCEDDIKALVPHIPRSCQSILMSA 286
Query: 417 TWPKEVRKIASDLLSNPVQV---NIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQ 473
T ++ K+ LL NP + +G+ + K++ Q+ +K + +L+ +
Sbjct: 287 TSSADIEKLTKLLLHNPFILTLTEVGHAKDDLIPKNVQQFWISCDAKDKMLYILVLLKLE 346
Query: 474 EPGSKIIIFCSTKRMCDQLARNLARQYG--ASAIHGDKSQAERDSVLSEFRSGRCPILVA 531
K++IF ++ +L R ++G +S ++ + Q R ++ F + L+A
Sbjct: 347 LIQKKVLIFVNSIDSAFKL-RLFLEKFGIRSSVLNAELPQNSRLHIIQAFNARLFDYLIA 405
Query: 532 TD---------------------------------VAARGLDIKDIRVVVNYDFPTGVED 558
TD RG+D K++ VVNYD P
Sbjct: 406 TDDNKSKEERQANKGNKKDSRVSRKQLQQTLDAEFGVVRGIDFKNVFTVVNYDMPPDPAG 465
Query: 559 YVHRI 563
YVHR+
Sbjct: 466 YVHRV 470
>Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (eIF4A-6) (eIF-4A-6)
(Fragment)
Length = 946
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 166/378 (43%), Gaps = 16/378 (4%)
Query: 235 SRLFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLK 294
++ ++ + Q P+ + + DI+ + G+ TL I L+
Sbjct: 582 AQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGTTVTLCCGI-----LQ 636
Query: 295 RLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGR--SSRISSVCLYGGAPKGPQLRDLER 352
RL + S + LVL PT +LA + Q+ G+ S++ + C GG + L
Sbjct: 637 RLDYASTE-CQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFC--GGTSAHEDQQILST 693
Query: 353 GADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTL 412
G + V TP + +L+ R + + VLDEAD +L GF+ QI I++ + K Q
Sbjct: 694 GVQVAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQFG 752
Query: 413 MFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRS 472
F+A+ E ++ ++ PV++ + ++L YV+V K +L + +
Sbjct: 753 FFSASMSHEALEMCRKYMNKPVEIIVPRDEELEGINVKQFYVNVEKEDCKLDKLCGLFDT 812
Query: 473 QEPGSKIIIFCSTKRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVA 531
E ++ IIF +T+ L + + Y SAIHG Q RD + EF+SG IL+
Sbjct: 813 MEI-TRSIIFVNTRHHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILIT 871
Query: 532 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLV 591
TD+ RG+D+ + YD PT Y+ + VA +F D + S +
Sbjct: 872 TDL--RGIDVLRAPAAIFYDLPTQPVCYLRHV-QSGQHGRKGVAISFITSTDERVFSTIQ 928
Query: 592 KILEGANQSVSQQLRDMV 609
K + + + D++
Sbjct: 929 KFCNTQIEELPSNVADLL 946
>Os01g0197200 Similar to Ethylene-responsive RNA helicase
Length = 71
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 302 DGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGA 354
DGP VLVL+PTRELA QIQ EA KFG SS+I S C+YGG PKGPQ+RDL++G+
Sbjct: 14 DGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGS 66
>Os07g0517000 DEAD/DEAH box helicase domain containing protein
Length = 524
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 401 IVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPP 460
+V Q+ RQTL+F+AT K V+ +A L +P +++ ++ QY +I P
Sbjct: 3 VVSQLPKVRQTLLFSATQTKSVKDLARVSLKDPEYISVHEEATTATPDTLEQYA-MIVPL 61
Query: 461 EKSRRLDQILRSQEPGSKIIIFCSTKRMCD---QLARNLARQYGASAIHGDKSQAERDSV 517
E+ + + S+I++F S+ + ++ + L +HG + ++
Sbjct: 62 EQKLNMLWSFIKRHLKSRILVFLSSVKQVKFVYEVFKKLRPGISLRCMHGRMKYEVQQAI 121
Query: 518 LSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYT 577
++EF+ G +L +TD+ ARGLDI+D+ VV D P + Y+HR+ A
Sbjct: 122 VAEFKEGHS-VLFSTDIFARGLDIEDVDWVVQVDCPENIALYIHRVGRTARYNKRGKALI 180
Query: 578 FFCDQDSKYASDL 590
F C ++ K L
Sbjct: 181 FLCPEEEKMLEKL 193
>Os09g0383400 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 498
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 36/202 (17%)
Query: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDG-- 303
+ AG + P+ +QA P L D++ A+TGSGKT GYL+P L ++ DG
Sbjct: 95 LHGAGLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLIEKLCSKSISAEDGNS 154
Query: 304 ---------------PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKG-PQL 347
P V++ +A + DE+ + +S+ ++VC PKG P +
Sbjct: 155 QDVTSGSPNIALVLCPNVMLCEQVVRMANSLVDESGEPLKSA--AAVC----GPKGWPTV 208
Query: 348 RDLERGADIVVATPGRLNDIL-----EMRRVS--LHQVSYLVLDEADRMLDMGFEPQIRK 400
R DI+VATP L + L E RR L V ++V DEAD +L FE Q+ +
Sbjct: 209 R-----PDILVATPAALLNYLFDYDPEKRRRERFLRNVKFIVFDEADMLLCGSFENQVIR 263
Query: 401 IVKQVQPKRQTLMFTATWPKEV 422
++ ++ + L KE+
Sbjct: 264 LIHMLRFDEKLLSRMEDSGKEI 285
>Os02g0201900 DEAD/DEAH box helicase domain containing protein
Length = 124
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 504 AIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 563
+IHGDK+ ER L F +G ++V T V RG+D+ +R V+ +D P +++YVH++
Sbjct: 1 SIHGDKTMNERRESLRRFLTGEVSVVVCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQV 60
Query: 564 XXXXXXXXXXVAYTFFCDQDSKYASDLVKILEGANQSVSQQL 605
+A F ++D +LV+IL+ A + ++L
Sbjct: 61 GRASRMGVEGMAIVFVNEEDRNLFRELVQILKTAGAPIPREL 102
>Os01g0911100 Similar to DEAD box RNA helicase
Length = 117
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 540 DIKDIRVVVNYDFPTGVEDYVHRIXXXXXXXXXXVAYTFFCDQDSKYASDLVKILEGANQ 599
D+KDI+ V+N+DFPT +EDY+HRI A+TFF ++K++ +LVKIL A Q
Sbjct: 12 DVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKILREAGQ 71
Query: 600 SVSQQLRDM 608
V+ L M
Sbjct: 72 VVNPALESM 80
>Os07g0681600 ATP-dependent DNA helicase RecQ family protein
Length = 886
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 135/329 (41%), Gaps = 45/329 (13%)
Query: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVL 309
GFS Q + L RD + V TGSGK++ Y IP + K T +V+
Sbjct: 10 GFSGFRSYQREIIQKVLEGRDCLVVMATGSGKSICYQIPPLVTKK----------TAVVV 59
Query: 310 SPTRELATQIQDEA---KKFGRSSRI-----SSVCLYGGAPKGPQLRDLERGADIVVATP 361
SP L + +QD+ K+ G S + + + G A KG L + V+ P
Sbjct: 60 SP---LLSLMQDQVMSLKQHGVKSEYLGSTQTDISVSGQAEKGA-FDVLYMTPEKAVSLP 115
Query: 362 GRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLM------FT 415
R L+ + L L +DEA + + G + R KQ+ R L+ T
Sbjct: 116 SRFWSNLQAAGICL-----LAVDEAHCISEWGHD--FRTEYKQLHMLRDLLVGVPFVALT 168
Query: 416 ATWPKEVR-KIASDLLSNPVQVNIGNTDQ---LVANKSITQYVDVITPPEKSRRLDQILR 471
AT + VR IA+ L + +G+ D+ KS + + I K + +
Sbjct: 169 ATATQRVRGDIATSLTLRIPHIVVGSFDRPNLFYGVKSCNRSMAFINELVK-----DVSK 223
Query: 472 SQEPGSKIIIFCSTKRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILV 530
+ G II+C+T R +Q+ L A +S HG R+ F ++V
Sbjct: 224 NCTVGGSTIIYCTTIRETEQVHEALVAAGIKSSIYHGRMGNKAREESHRSFVRDEVLVMV 283
Query: 531 ATDVAARGLDIKDIRVVVNYDFPTGVEDY 559
AT G+D D+R V++Y P +E Y
Sbjct: 284 ATIAFGMGIDKPDVRCVIHYGCPKSLESY 312
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,753,124
Number of extensions: 850550
Number of successful extensions: 2164
Number of sequences better than 1.0e-10: 56
Number of HSP's gapped: 2025
Number of HSP's successfully gapped: 60
Length of query: 759
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 651
Effective length of database: 11,396,689
Effective search space: 7419244539
Effective search space used: 7419244539
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)