Os01g0172200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WW/Rsp5/WWP domain containing protein.
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Os01g0172200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WW/Rsp5/WWP domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.29 | 0.206 | 8.82 | -0.875 | 0.902 | -0.809 | -0.475 | -0.141 | -0.303 | 3.29 | 15.38 | 126 | -- | -- |
| 19.3 | 0.205 | 8.82 | -0.857 | 0.901 | -0.784 | -0.434 | -- | -0.297 | 3.3 | 16.14 | 116 | -- | -- |
| 19.84 | 0.207 | 8.82 | -0.823 | 0.893 | -0.816 | -- | 0.2 | -0.288 | 3.29 | 15.67 | 126 | -- | -- |
| 19.9 | 0.208 | 8.82 | -0.852 | 0.907 | -0.761 | -- | -- | -0.298 | 3.33 | 16.19 | 123 | -- | -- |
| 49.58 | 0.328 | 8.77 | -0.495 | -- | -1.53 | -- | 1.08 | -0.0969 | -- | 20.6 | 97 | -- | -- |
| 26.34 | 0.241 | 8.84 | -1.02 | 1.15 | -- | -0.295 | -- | -0.414 | 3.34 | -- | -- | -- | -- |
| 26.62 | 0.242 | 8.84 | -1.02 | 1.14 | -- | -- | -- | -0.412 | 3.35 | -- | -- | -- | -- |
| 50.81 | 0.332 | 8.78 | -0.616 | -- | -1.41 | -- | -- | -0.138 | -- | 20.17 | 95 | -- | -- |
| 37.15 | 0.284 | 8.78 | -- | 0.816 | -1.12 | -- | -- | -0.156 | 3.15 | 14.85 | 166 | -- | -- |
| 100.44 | 0.468 | 8.84 | -0.97 | -- | -- | -- | -- | -0.382 | -- | -- | -- | -- | -- |
| 53.94 | 0.344 | 8.82 | -- | 1.12 | -- | -- | -- | -0.299 | 3.35 | -- | -- | -- | -- |
| 60.74 | 0.363 | 8.76 | -- | -- | -1.81 | -- | -- | -0.0464 | -- | 17 | 101 | -- | -- |
| 125.24 | 0.522 | 8.82 | -- | -- | -- | -- | -- | -0.274 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.56 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 2 | 17.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 3 | 17.70 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 26 | 18.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 39 | 18.55 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 40 | 18.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 91 | 18.95 | temperature | 15 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 104 | 19.12 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 19 |
| 133 | 19.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 153 | 19.34 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 164 | 19.36 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 17 |
| 167 | 19.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 23 |
| 182 | 19.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 21 |
| 184 | 19.41 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 202 | 19.45 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 248 | 19.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 249 | 19.58 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 351 | 19.79 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 457 | 19.99 | temperature | 10 | 270 | > th | dose dependent | sin | 5 | NA |
| 483 | 20.05 | temperature | 10 | 90 | > th | dose dependent | sin | 1 | NA |
| 514 | 20.12 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 535 | 20.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 11 |
| 549 | 20.17 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 551 | 20.18 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 563 | 20.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 569 | 20.21 | temperature | 30 | 90 | < th | dose dependent | sin | 2 | NA |
| 611 | 20.27 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 613 | 20.27 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 685 | 20.38 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 747 | 20.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 775 | 20.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 896 | 20.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 9 |
| 998 | 20.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |