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Os02g0150100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to DEAD-box protein abstrakt.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0142) R2 : 0.0215
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0947 (0.0299) R2dN8 : 0.0278 R2N8 : 0.0215
σ : 0.267
deviance : 32.83
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.55 0.179 11.3 1.16 0.141 -0.435 0.172 1.78 0.0901 14.3 25.8 1088 -- --
15.2 0.182 11.4 0.814 0.177 -0.249 0.034 -- 0.0896 13.3 26.69 9719 -- --
14.63 0.178 11.3 1.15 0.142 -0.426 -- 1.67 0.0857 13.8 25.91 1107 -- --
15.18 0.181 11.4 0.803 0.175 -0.241 -- -- 0.083 13 26.76 9727 -- --
15.76 0.185 11.3 1.17 -- -0.464 -- 1.7 0.0969 -- 25.5 1094 -- --
17.32 0.195 11.4 0.709 0.197 -- 0.0697 -- -0.0131 13.1 -- -- -- --
17.34 0.195 11.4 0.712 0.197 -- -- -- -0.0128 13 -- -- -- --
16.79 0.191 11.4 0.795 -- -0.271 -- -- 0.000378 -- 25.8 2620 -- --
24.22 0.229 11.4 -- 0.202 0.396 -- -- -0.218 12.9 15.31 47520 -- --
19.75 0.208 11.4 0.704 -- -- -- -- -0.0166 -- -- -- -- --
30.69 0.259 11.4 -- 0.185 -- -- -- -0.092 12.8 -- -- -- --
26.76 0.241 11.4 -- -- 0.384 -- -- -0.217 -- 15.2 47520 -- --
32.83 0.267 11.4 -- -- -- -- -- -0.0947 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.72 radiation 1 4320 > th dose independent rect. 18 11
2 13.75 radiation 1 4320 > th dose independent rect. 18 1
12 13.82 radiation 1 4320 < th dose independent rect. 18 9
13 13.82 radiation 1 4320 < th dose independent rect. 18 11
14 13.83 radiation 1 4320 < th dose independent rect. 18 7
17 13.84 radiation 1 4320 < th dose independent rect. 18 1
20 13.84 radiation 1 4320 < th dose independent rect. 18 5
25 13.96 radiation 40 4320 < th dose independent rect. 6 3
26 13.96 radiation 40 4320 < th dose independent rect. 17 16
29 13.97 radiation 40 4320 < th dose independent rect. 19 14
32 13.98 radiation 40 4320 < th dose independent rect. 24 9
42 14.06 radiation 30 4320 > th dose dependent rect. 7 2
85 14.19 humidity 80 14400 > th dose dependent rect. 22 1
86 14.20 wind 3 43200 < th dose dependent rect. 24 5
87 14.22 radiation 30 14400 > th dose independent rect. 16 16
88 14.23 radiation 10 1440 < th dose dependent rect. 18 8
91 14.24 radiation 30 14400 > th dose independent rect. 7 1
113 14.26 radiation 10 1440 < th dose dependent rect. 18 2
127 14.29 humidity 90 14400 < th dose independent rect. 21 5
162 14.33 humidity 90 14400 > th dose dependent rect. 22 4
164 14.34 wind 3 43200 < th dose independent rect. 3 1
216 14.37 wind 3 43200 > th dose independent rect. 3 1
222 14.37 humidity 80 14400 > th dose dependent rect. 19 9
236 14.38 wind 1 43200 > th dose dependent rect. 24 14
279 14.40 wind 9 43200 < th dose dependent rect. 24 14
295 14.41 radiation 1 4320 > th dose independent rect. 18 15
303 14.41 wind 1 43200 > th dose dependent rect. 2 12
307 14.42 humidity 90 14400 < th dose independent sin 12 NA
317 14.42 humidity 90 14400 > th dose dependent rect. 24 1
339 14.43 radiation 1 1440 > th dose dependent rect. 18 11
345 14.44 humidity 90 14400 > th dose independent rect. 18 12
352 14.44 temperature 30 4320 > th dose dependent rect. 18 1
368 14.44 wind 9 43200 < th dose dependent rect. 2 12
375 14.45 radiation 1 14400 > th dose independent rect. 5 1
376 14.45 radiation 1 14400 < th dose independent rect. 5 1
378 14.45 humidity 90 14400 > th dose independent rect. 19 9
409 14.46 wind 3 43200 > th dose independent rect. 10 3
413 14.46 radiation 1 4320 < th dose independent rect. 18 15
418 14.46 radiation 1 4320 > th dose dependent rect. 18 1
423 14.46 wind 1 43200 > th dose dependent rect. 24 4
445 14.47 humidity 90 14400 > th dose independent rect. 21 6
456 14.47 wind 5 43200 < th dose dependent rect. 10 2
495 14.48 wind 1 43200 > th dose dependent sin 5 NA
531 14.49 wind 1 43200 > th dose dependent rect. 9 4
550 14.50 wind 3 43200 < th dose independent rect. 10 2
571 14.50 humidity 80 43200 > th dose dependent rect. 5 6
597 14.51 humidity 90 43200 < th dose independent rect. 5 3
611 14.51 humidity 90 14400 > th dose independent rect. 14 16
616 14.51 wind 9 43200 < th dose dependent sin 5 NA
623 14.51 humidity 80 43200 > th dose dependent rect. 6 4
653 14.52 radiation 1 14400 < th dose independent rect. 24 6
681 14.53 wind 7 43200 > th dose independent rect. 10 1
682 14.53 humidity 90 43200 < th dose independent rect. 6 1
683 14.53 humidity 90 14400 < th dose independent rect. 24 1
686 14.53 wind 1 43200 > th dose independent rect. 17 2
705 14.53 wind 3 43200 < th dose independent rect. 3 10
733 14.53 wind 9 43200 < th dose dependent rect. 7 6
740 14.53 wind 1 43200 > th dose dependent rect. 24 7
757 14.54 humidity 90 14400 > th dose independent sin 12 NA
789 14.54 wind 3 43200 > th dose independent rect. 3 10
863 14.55 humidity 80 14400 > th dose dependent sin 13 NA
864 14.55 humidity 80 43200 > th dose dependent rect. 9 1