BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0150100 Os02g0150100|AK060595
(460 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0150100 Similar to DEAD-box protein abstrakt 904 0.0
Os06g0697200 DEAD/DEAH box helicase domain containing protein 473 e-133
AK110107 302 3e-82
Os11g0599500 Similar to RNA helicase (Fragment) 298 8e-81
Os07g0202100 Similar to ATP-dependent RNA helicase ded1 295 3e-80
AK107287 294 1e-79
Os03g0805200 Similar to RNA helicase (Fragment) 291 5e-79
Os03g0708600 DEAD/DEAH box helicase, N-terminal domain cont... 291 6e-79
Os03g0308500 DEAD/DEAH box helicase, N-terminal domain cont... 291 8e-79
AK119751 289 4e-78
AK111212 286 3e-77
Os08g0159900 DEAD/DEAH box helicase, N-terminal domain cont... 280 2e-75
Os01g0549400 Similar to RNA helicase-like protein DB10 278 7e-75
Os11g0689400 WW/Rsp5/WWP domain containing protein 270 1e-72
Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (... 266 3e-71
Os07g0301200 Similar to RNA helicase (Fragment) 261 6e-70
Os01g0172200 WW/Rsp5/WWP domain containing protein 256 2e-68
Os12g0481100 Similar to RNA helicase 220 2e-57
Os03g0827700 Similar to ATP-dependent RNA helicase 219 4e-57
Os08g0416100 DEAD/DEAH box helicase, N-terminal domain cont... 213 3e-55
Os07g0647900 DEAD/DEAH box helicase, N-terminal domain cont... 202 3e-52
Os03g0669000 Similar to RNA helicase (Fragment) 202 4e-52
Os02g0146600 Similar to Eukaryotic initiation factor 4A (eI... 194 1e-49
Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A) 194 1e-49
Os09g0520700 Similar to RNA helicase 193 2e-49
Os07g0633500 DEAD/DEAH box helicase, N-terminal domain cont... 191 1e-48
Os01g0549700 Similar to RNA helicase (Fragment) 189 5e-48
Os01g0550000 DEAD/DEAH box helicase, N-terminal domain cont... 188 6e-48
Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (... 187 1e-47
Os04g0533000 Similar to RNA helicase (Fragment) 187 2e-47
Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (... 184 9e-47
Os02g0641800 Similar to RNA helicase (Fragment) 184 2e-46
Os01g0164500 Similar to ATP-dependent RNA helicase-like pro... 182 5e-46
Os01g0184500 DEAD/DEAH box helicase, N-terminal domain cont... 181 1e-45
Os05g0110500 Similar to RNA helicase (Fragment) 180 2e-45
Os10g0503700 Similar to RNA helicase (Fragment) 178 9e-45
Os07g0660000 176 3e-44
Os01g0618500 Similar to RNA helicase (Fragment) 172 3e-43
Os02g0826100 Similar to RNA helicase (Fragment) 167 1e-41
Os01g0618400 Similar to RNA helicase (Fragment) 167 1e-41
Os03g0219700 DEAD/DEAH box helicase, N-terminal domain cont... 164 1e-40
Os02g0636300 DEAD/DEAH box helicase, N-terminal domain cont... 163 3e-40
Os04g0510400 Similar to RNA helicase (Fragment) 157 1e-38
Os03g0728800 Similar to RNA helicase (Fragment) 138 9e-33
Os07g0143700 Similar to DEAD-Box RNA helicase-like protein 129 5e-30
Os06g0535100 Similar to Helicase pitchoune (Fragment) 129 6e-30
Os03g0108600 DEAD/DEAH box helicase, N-terminal domain cont... 123 3e-28
AK068197 112 5e-25
Os02g0795900 Similar to DEAD box-like RNA helicase (Fragment) 110 3e-24
Os12g0611200 DEAD/DEAH box helicase, N-terminal domain cont... 105 6e-23
Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (... 104 2e-22
Os07g0517000 DEAD/DEAH box helicase domain containing protein 84 2e-16
Os02g0201900 DEAD/DEAH box helicase domain containing protein 75 1e-13
AK063048 72 9e-13
Os04g0486800 ATP-dependent DNA helicase RecQ family protein 72 1e-12
>Os02g0150100 Similar to DEAD-box protein abstrakt
Length = 460
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/444 (100%), Positives = 444/444 (100%)
Query: 1 WHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAF 60
WHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAF
Sbjct: 1 WHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAF 60
Query: 61 TGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKE 120
TGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKE
Sbjct: 61 TGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKE 120
Query: 121 AGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEA 180
AGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEA
Sbjct: 121 AGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEA 180
Query: 181 DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANL 240
DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANL
Sbjct: 181 DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANL 240
Query: 241 DVIQEVEYVKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGK 300
DVIQEVEYVKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGK
Sbjct: 241 DVIQEVEYVKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGK 300
Query: 301 DQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRC 360
DQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRC
Sbjct: 301 DQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRC 360
Query: 361 GKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEETMAKESGVKGCA 420
GKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEETMAKESGVKGCA
Sbjct: 361 GKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEETMAKESGVKGCA 420
Query: 421 YCGGLGHRVTDCPKLEHQKSMAIA 444
YCGGLGHRVTDCPKLEHQKSMAIA
Sbjct: 421 YCGGLGHRVTDCPKLEHQKSMAIA 444
>Os06g0697200 DEAD/DEAH box helicase domain containing protein
Length = 308
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/277 (83%), Positives = 255/277 (92%), Gaps = 1/277 (0%)
Query: 169 LDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPV 228
L RYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP+KIQNFAKSALVKP+
Sbjct: 16 LHMSRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPI 75
Query: 229 IVNVGRAGAANLDVIQEVEYVKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLL 288
IVNVGRAGAANLDVIQEVEYVKE+ARIIYLLECLQKTPPPVLVFCE+KADVDYI E+LLL
Sbjct: 76 IVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVLVFCEHKADVDYIQEFLLL 135
Query: 289 KGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIE 348
KGVEAVAIHGGKD EER++A + FK +KDVLVATDVASKGLD PDIQHVINYDMPAEIE
Sbjct: 136 KGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIE 195
Query: 349 NYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEE 408
NYVHRIGRTGR GKTG+ATTFINKNQTETTLLDLK LL E+KQR+PP+LA+L+DP ED++
Sbjct: 196 NYVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRLPPILADLDDPQEDDK 255
Query: 409 -TMAKESGVKGCAYCGGLGHRVTDCPKLEHQKSMAIA 444
+A++SGVKGCA+CGGLGHR+ CPK + Q S+ +A
Sbjct: 256 VAIAQQSGVKGCAFCGGLGHRIEACPKQQLQNSVTLA 292
>AK110107
Length = 671
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 251/424 (59%), Gaps = 31/424 (7%)
Query: 5 VDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSG 64
G DVP P R+F + L + ++R + PTP+Q +P+V+ GRD++ A TGSG
Sbjct: 170 ASGHDVPEPVREFTNPPLDDHLIRNIDLARYKIPTPVQKYSIPIVMGGRDLMACAQTGSG 229
Query: 65 KTLVFVLPLIMVALQEEMMMPIVPGEGPFG---------MIICPSRELAKQTYDVIEQFL 115
KT F+ P++ A Q G G FG +I+ P+REL Q YD +F
Sbjct: 230 KTGGFLFPILSQAFQTGPSANPTAGGGGFGRQRKAYPTSLILAPTRELVSQIYDESRKF- 288
Query: 116 VPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYL 175
A +RP + GG D+ +QL +++G ++VATPGRL DL+ + +++L N +YL
Sbjct: 289 -----AYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYL 343
Query: 176 TLDEADRLVDLGFEDDIREVF---DHFKAQ-RQTLLFSATMPKKIQNFAKSALVKPVIVN 231
LDEADR++D+GFE IR + D Q RQTL+FSAT P+ IQ A+ L + ++
Sbjct: 344 VLDEADRMLDMGFEPQIRRIVEGEDMPNVQDRQTLMFSATSPRDIQMLARDFLKDYIFLS 403
Query: 232 VGRAGAANLDVIQEVEYVKEDARIIYLLECLQKTPPPV-LVFCENKADVDYIHEYLLLKG 290
VGR G+ + ++ Q+VEYV++ + LL+ L + L+F E K D + ++L+ +
Sbjct: 404 VGRVGSTSENITQKVEYVEDVDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLINQN 463
Query: 291 VEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 350
A +IHG + Q ERE A+E F+NG+ +LVAT VA++GLD P++ HV+NYD+P +I++Y
Sbjct: 464 FPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDY 523
Query: 351 VHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEETM 410
VHRIGRTGR G TG +T F N+ + +L LLKEA Q +P L ET+
Sbjct: 524 VHRIGRTGRAGNTGHSTAFFNRG-NRGVVRELLDLLKEANQEVPAFL----------ETI 572
Query: 411 AKES 414
A+ES
Sbjct: 573 ARES 576
>Os11g0599500 Similar to RNA helicase (Fragment)
Length = 623
Score = 298 bits (762), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 245/412 (59%), Gaps = 27/412 (6%)
Query: 5 VDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSG 64
G +VPPP F ++ L + + +R V+PTP+Q +P+ L+GRD++ A TGSG
Sbjct: 145 TSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSG 204
Query: 65 KTLVFVLPLIMVALQEEMMMPIVPGEG------PFGMIICPSRELAKQTYDVIEQFLVPL 118
KT F P+I ++ P G P +I+ P+REL+ Q ++ +F
Sbjct: 205 KTAAFCFPIISGIMRGPPAQ--RPQRGGMRTACPLALILSPTRELSMQIHEEARKFSY-- 260
Query: 119 KEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLD 178
+ G +R ++ GG + QL +++GV I+VATPGRL DLL + +++L + RYL LD
Sbjct: 261 -QTG---VRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALD 316
Query: 179 EADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGR 234
EADR++D+GFE +R + + RQT+LFSAT PK+IQ A L + + VGR
Sbjct: 317 EADRMLDMGFEPQVRRIVEQMDMPPPGARQTMLFSATFPKEIQRMASDFLENYIFLAVGR 376
Query: 235 AGAANLDVIQEVEYVKEDARIIYLLECLQKT--------PPPVLVFCENKADVDYIHEYL 286
G++ ++Q VE+V+E + +L++ L P LVF E K D + +L
Sbjct: 377 VGSSTDLIVQRVEFVQEADKRSHLMDLLHAQRDSATPGKPTLTLVFVETKRGADSLEHWL 436
Query: 287 LLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAE 346
+ G A +IHG ++Q+ERE A+ FK+G +LVATDVA++GLD P + HV+N+D+P +
Sbjct: 437 CMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPND 496
Query: 347 IENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLA 398
I++YVHRIGRTGR GK+G+AT F N+N + + L L++E+ Q +P L+
Sbjct: 497 IDDYVHRIGRTGRAGKSGLATAFFNENNS-SMARSLAELMQESNQEVPAWLS 547
>Os07g0202100 Similar to ATP-dependent RNA helicase ded1
Length = 638
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 242/412 (58%), Gaps = 27/412 (6%)
Query: 3 ILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTG 62
+ G DVPPPA F ++ L + + +R V+PTP+Q +P+ ++GRD++ A TG
Sbjct: 157 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 216
Query: 63 SGKTLVFVLPLIMVALQEEMMMPIVPGEG-----PFGMIICPSRELAKQTYDVIEQFLVP 117
SGKT F P+I ++ P G P +I+ P+REL+ Q ++ +F
Sbjct: 217 SGKTAAFCFPIISGIMRSR---PPPRSRGSRTAYPLALILSPTRELSVQIHEEARKF--- 270
Query: 118 LKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTL 177
A ++ ++ GG + QL +++GV I+VATPGRL DLL + +++L +YL L
Sbjct: 271 ---AYQTGVKVVVAYGGAPITQQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLAL 327
Query: 178 DEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVG 233
DEADR++D+GFE IR++ + + +RQT+LFSAT PK+IQ A L + + VG
Sbjct: 328 DEADRMLDMGFEPQIRKIVEQMDMPPRGERQTMLFSATFPKEIQRMASDFLADYIFLAVG 387
Query: 234 RAGAANLDVIQEVEYVKEDARIIYLLECLQKTPPP--------VLVFCENKADVDYIHEY 285
R G++ ++Q VE+V + + YL++ L LVF E K D + +
Sbjct: 388 RVGSSTDLIVQRVEFVLDADKRSYLMDLLHAQRANGTHGKQALTLVFVETKRGADALENW 447
Query: 286 LLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPA 345
L G A +IHG + Q+ERE A+ FK+G +LVATDVA++GLD P + HVIN+D+P
Sbjct: 448 LYNNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPN 507
Query: 346 EIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVL 397
+I++YVHRIGRTGR GK+G+AT F N++ T L L++EA Q +P L
Sbjct: 508 DIDDYVHRIGRTGRAGKSGLATAFFNESNTPLA-RPLSELMQEANQEVPQWL 558
>AK107287
Length = 554
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/403 (40%), Positives = 236/403 (58%), Gaps = 14/403 (3%)
Query: 2 HILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFT 61
+ + G +VP P F + P+ +L ++++ G +P+ IQ Q P+ LSGRD++ IA T
Sbjct: 120 QMTIQGQNVPKPVTSFDEAGFPDYILSEIKKMGFAEPSAIQSQAWPMALSGRDLVAIAET 179
Query: 62 GSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEA 121
GSGKT+ F LP MV + + ++ PG+GP +I+ P+RELA Q +F
Sbjct: 180 GSGKTIGFALPA-MVHINAQPLLK--PGDGPIALILAPTRELANQIQVECNRF------G 230
Query: 122 GYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEAD 181
G +R GGV Q +++G IV+ATPGRL D++ K NL YL +DEAD
Sbjct: 231 GSSRLRTCAVYGGVPKGPQTRDLQRGAEIVIATPGRLIDMVDAGKTNLRRVTYLVMDEAD 290
Query: 182 RLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAG-AANL 240
R++D+GFE IR++ + RQTL+FSAT PK++Q A L VN+G AAN
Sbjct: 291 RMLDMGFEPQIRKILQQIRPDRQTLMFSATWPKEVQRLAGDFLNDFAQVNIGSTELAANH 350
Query: 241 DVIQEVEYVKE---DARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIH 297
+V Q +E E ++I LE + + V++F K D + +YL G A+AIH
Sbjct: 351 NVKQIIEVCSEFEKKGKLIGHLETISQENGKVIIFTSTKRVADDLTKYLRQDGWPALAIH 410
Query: 298 GGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRT 357
G K Q+ER+ + FK+G+ ++VAT VAS+GLD DI +VINYD P E+YVH+IGRT
Sbjct: 411 GDKQQQERDWVLAEFKSGRSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRT 470
Query: 358 GRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAEL 400
GR G+TG A TF +++ +L +L+EAKQ IP + E+
Sbjct: 471 GRAGRTGTAYTFFTPENSKSA-RELVGILREAKQEIPREIEEM 512
>Os03g0805200 Similar to RNA helicase (Fragment)
Length = 637
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 237/411 (57%), Gaps = 25/411 (6%)
Query: 3 ILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTG 62
+ G DVPPP F ++ L + + +R V+PTP+Q +P+ ++GRD++ A TG
Sbjct: 162 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 221
Query: 63 SGKTLVFVLPLIMVALQEEMMMPIVPGEG----PFGMIICPSRELAKQTYDVIEQFLVPL 118
SGKT F P+I + P P P +I+ P+REL+ Q ++ +F
Sbjct: 222 SGKTAAFCFPIISGIMSSRP--PQRPRGSRTAYPLALILSPTRELSVQIHEEARKF---- 275
Query: 119 KEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLD 178
A +R ++ GG + QL +++GV I+VATPGRL DLL + +++L +YL LD
Sbjct: 276 --AYQTGVRVVVAYGGAPIHQQLRELERGVEILVATPGRLMDLLERARVSLQMVKYLALD 333
Query: 179 EADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGR 234
EADR++D+GFE IR++ + + RQT+LFSAT PK+IQ A L + + VGR
Sbjct: 334 EADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPKEIQRMASDFLADYIFLAVGR 393
Query: 235 AGAANLDVIQEVEYVKEDARIIYLLECLQKTPPP--------VLVFCENKADVDYIHEYL 286
G++ + Q VE+V E + YL++ L LVF E K D + +L
Sbjct: 394 VGSSTDLIAQRVEFVLEADKRSYLMDLLHAQKANGTHGKQALTLVFVETKRGADALENWL 453
Query: 287 LLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAE 346
G A +IHG + Q+ERE A+ FK+G +LVATDVA++GLD P + HVIN+D+P +
Sbjct: 454 YTNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPND 513
Query: 347 IENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVL 397
I++YVHRIGRTGR GK+G+AT F N+ + L L++EA Q +P L
Sbjct: 514 IDDYVHRIGRTGRAGKSGLATAFFNEGNL-SLARPLCELMQEANQEVPQWL 563
>Os03g0708600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 736
Score = 291 bits (746), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/416 (38%), Positives = 237/416 (56%), Gaps = 25/416 (6%)
Query: 1 WHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAF 60
++I G VP P R + + +L +LR + + G +P+PIQ+ +P+ L RD+IGIA
Sbjct: 301 FNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAE 360
Query: 61 TGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKE 120
TGSGKT FVLP++ + + EGP+ +++ P+RELA+Q IE+ V K
Sbjct: 361 TGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQ----IEEETV--KF 414
Query: 121 AGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEA 180
A Y I+ + +GG + Q +++G +V+ATPGRL D L ++ L+ C Y+ LDEA
Sbjct: 415 ATYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEA 474
Query: 181 DRLVDLGFEDDIREVFDHFKAQ-----------------RQTLLFSATMPKKIQNFAKSA 223
DR++D+GFE + V D + R T +FSATMP ++ A+
Sbjct: 475 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDAKTIYRTTYMFSATMPPAVERLARKY 534
Query: 224 LVKPVIVNVGRAGAANLDVIQEVEYVKEDARIIYLLECLQK-TPPPVLVFCENKADVDYI 282
L PV+V +G AG A + Q V KE ++ L + L P +VFC K D
Sbjct: 535 LRNPVVVTIGTAGKATDLITQNVIMTKESEKMSRLQKILTDLGDKPAIVFCNTKKSADAR 594
Query: 283 HEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYD 342
+ L G +HGGK QE+RE +++ F+N + VLVATDVA +G+D PD+ HVINY+
Sbjct: 595 AKDLDKAGFRVTTLHGGKSQEQRETSLDGFRNRRFTVLVATDVAGRGIDIPDVAHVINYE 654
Query: 343 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLA 398
MP+ I+ Y HRIGRTGR GK G+AT+F+ T+ DLK +L ++ +PP LA
Sbjct: 655 MPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTD-IFFDLKQMLIQSNSPVPPELA 709
>Os03g0308500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 770
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 233/402 (57%), Gaps = 14/402 (3%)
Query: 3 ILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTG 62
I V G DVP P + F D P ++ + ++G +PT IQ Q LP+VLSGRD+IGIA TG
Sbjct: 207 IRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTG 266
Query: 63 SGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAG 122
SGKT FVLP+I+ + + + EGP G++ P+RELA Q Y ++F P
Sbjct: 267 SGKTAAFVLPMIVHIMDQPELEK---EEGPIGVVCAPTRELAHQIYLEAKKFAKPYN--- 320
Query: 123 YPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADR 182
+R GGV Q +K G IV+ATPGRL DLL K + + YL LDEADR
Sbjct: 321 ---LRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADR 377
Query: 183 LVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDV 242
+ DLGFE IR + + RQTLLFSATMP K++ A+ L P+ V VG+ G+AN D+
Sbjct: 378 MFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDI 437
Query: 243 IQEVEYVKEDA-RIIYLLECLQKT--PPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGG 299
Q V + DA ++ +LLE L VLVF KA VD I L +G A+HG
Sbjct: 438 KQVVNVLPSDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGD 497
Query: 300 KDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGR 359
KDQ R ++ FK+G VLVATDVA++GLD I+ V+N+D+ E++ ++HRIGRTGR
Sbjct: 498 KDQASRMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGR 557
Query: 360 CG-KTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAEL 400
G K G A T I + + +L H L A Q +P L +L
Sbjct: 558 AGDKDGTAYTLITQKEVRFA-GELVHCLIAAGQDVPNELMDL 598
>AK119751
Length = 628
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/404 (40%), Positives = 235/404 (58%), Gaps = 14/404 (3%)
Query: 3 ILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTG 62
+ G D PP F L L E M+ +R +PTP+Q +P+ L+GRD++ A TG
Sbjct: 153 VEASGRDCPPHVDGFDQLDLGEVMMNNIRRCKYTKPTPVQRYAIPIGLAGRDIMACAQTG 212
Query: 63 SGKTLVFVLPLIMVALQEEMMMPIVPGEG--PFGMIICPSRELAKQTYDVIEQFLVPLKE 120
SGKT F P+I L + P P +I+ P+REL Q Y+ +F +
Sbjct: 213 SGKTAAFCFPIIS-GLVKAGYQPTGRQRKALPAALILAPTRELTSQIYEEARKFSY---Q 268
Query: 121 AGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEA 180
+G IRP++ GG + QL +++G ++VATP RL DL+ + +++L RYL LDEA
Sbjct: 269 SG---IRPVVIYGGAPVVNQLREMERGCDMLVATPRRLSDLIERARVSLAAIRYLALDEA 325
Query: 181 DRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAG 236
DR++D+GFE IR + + QRQT+LFSAT PK+IQ A L + + VGR G
Sbjct: 326 DRMLDMGFEPQIRRIVEGEDMPPTGQRQTMLFSATFPKEIQRLAADFLHDYIFLTVGRVG 385
Query: 237 AANLDVIQEVEYVKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAI 296
++ + Q +EYV++D + +L+C+ LVF E K D + +YLL + + A +I
Sbjct: 386 SSTDLIAQHIEYVQQDQKRETVLDCVNTVEGLTLVFVETKRGADQLEDYLLRQNLPATSI 445
Query: 297 HGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGR 356
G K Q ERE A+ F++GK +LVATDVA++GLD P + HVINYD+P +I++YVHRIGR
Sbjct: 446 RGDKSQAEREMALRAFRSGKCRILVATDVAARGLDIPHVTHVINYDLPKDIDDYVHRIGR 505
Query: 357 TGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAEL 400
TGR GK G+AT F + L+ +L E Q +P LA +
Sbjct: 506 TGRAGKKGLATAFFTDDDFGLA-RSLQEVLSETGQEVPGWLANI 548
>AK111212
Length = 545
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 234/406 (57%), Gaps = 17/406 (4%)
Query: 2 HILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFT 61
+ + G +VP P F + P ++ +++ +G PT IQ QG P+ LSGRD++GIA T
Sbjct: 124 QMTIAGTEVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAET 183
Query: 62 GSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEA 121
GSGKTL + LP I+ + ++ PG+GP +++ P+RELA Q + +++F
Sbjct: 184 GSGKTLTYCLPSIVHINAQPLL---APGDGPIVLVLAPTRELAVQIQEEMKKF------G 234
Query: 122 GYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEAD 181
IR GGV Q+ + +GV + +ATPGRL D+L K NL YL LDEAD
Sbjct: 235 RSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEAD 294
Query: 182 RLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAG-AANL 240
R++D+GFE IR++ + RQTL +SA PK+++ A L + VN+G AAN
Sbjct: 295 RMLDMGFEPQIRKIIGQIRPDRQTLTWSAAWPKEVRALASDFLNDFIQVNIGSMELAANH 354
Query: 241 DVIQEVEYV----KEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAI 296
+ Q VE V K D I +L + ++ +L+F K D I +L G A++I
Sbjct: 355 RITQIVEVVTDMEKRDRMIKHLEKTMENKENKILIFVGTKRIADEITRFLRQDGWPALSI 414
Query: 297 HGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGR 356
HG K Q ER+ ++ FK GK ++VATDVAS+G+D +I HV+NYD P E+Y+HRIGR
Sbjct: 415 HGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPHNSEDYIHRIGR 474
Query: 357 TGRCGKTGIATT-FINKNQTETTLLDLKHLLKEAKQRIPPVLAELN 401
TGR G G A T F NQ + DL ++L EAKQ+I P L E+
Sbjct: 475 TGRAGAKGTAITLFTTDNQKQAR--DLVNVLTEAKQQIDPRLVEMT 518
>Os08g0159900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1049
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 244/432 (56%), Gaps = 17/432 (3%)
Query: 5 VDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSG 64
V G DVP P + + L +L +++ G +P IQ Q LP+++SGRD IGIA TGSG
Sbjct: 414 VHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSG 473
Query: 65 KTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYP 124
KTL FVLP++ + +VPG+GP G+I+ P+REL Q + I++F L
Sbjct: 474 KTLAFVLPMLRHVKDQPA---VVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALG----- 525
Query: 125 EIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCR---YLTLDEAD 181
I + GG + Q+ +K+G IVV TPGR+ D+L + N R +L +DEAD
Sbjct: 526 -INCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEAD 584
Query: 182 RLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLD 241
R+ D+GFE I + + + RQT+LFSAT P++++ A+ L KPV + VG N D
Sbjct: 585 RMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQVGGRSVVNKD 644
Query: 242 VIQEVEYVKEDARIIYLLECLQK--TPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGG 299
+ Q VE E+ R LLE L + +LVF ++ D + + L G +++HGG
Sbjct: 645 ITQLVEVRPENERFFRLLELLGEWFDKGKILVFVHSQDKCDSLLKDLFQHGYPCLSLHGG 704
Query: 300 KDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGR 359
KDQ +RE+ + FK+ +L+AT VA++GLD +++ V+NYD+P E+YVHR+GRTGR
Sbjct: 705 KDQTDRESTLADFKSNVCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGR 764
Query: 360 CGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEETMAKESGVKGC 419
G+ G A TFI++ + E DL L+ ++Q +P L L D + E G
Sbjct: 765 AGRKGFAVTFISEEE-ERYAPDLVKALELSEQAVPEDLKGLADRFMAKVKQGTEQ-AHGT 822
Query: 420 AYCGGLGHRVTD 431
Y GG G + +
Sbjct: 823 GY-GGSGFKFNE 833
>Os01g0549400 Similar to RNA helicase-like protein DB10
Length = 792
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/404 (40%), Positives = 232/404 (57%), Gaps = 20/404 (4%)
Query: 3 ILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTG 62
I V GD+VP P F P +L++++ G PTPIQ Q P+ L +D++ IA TG
Sbjct: 138 ITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTG 197
Query: 63 SGKTLVFVLPLIM--VALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKE 120
SGKTL ++LP M LQ P GP +++ P+RELA Q ++E+ + K
Sbjct: 198 SGKTLGYLLPGFMHIKRLQNN------PRSGPTVLVLAPTRELATQ---ILEEAV---KF 245
Query: 121 AGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEA 180
I GG QL + +GV +VVATPGRL D+L ++++L YL LDEA
Sbjct: 246 GRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEA 305
Query: 181 DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAG--AA 238
DR++D+GFE IR++ +RQTL+++AT PK+++ A+ LV PV V +G A
Sbjct: 306 DRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVA 365
Query: 239 NLDVIQEVEYVKEDARIIYLLECL--QKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAI 296
N + Q VE + ++ L + L Q + VL+FC K D + L + A AI
Sbjct: 366 NSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLAR-TLTRQFGASAI 424
Query: 297 HGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGR 356
HG K Q ERE + F++G+ +LVATDVA++GLD DI+ VINYD P IE+YVHRIGR
Sbjct: 425 HGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGR 484
Query: 357 TGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAEL 400
TGR G TG+A TF +Q DL +L+ A QR+P LA++
Sbjct: 485 TGRAGATGVAYTFFC-DQDSKYAADLIKILEGANQRVPRDLADM 527
>Os11g0689400 WW/Rsp5/WWP domain containing protein
Length = 1398
Score = 270 bits (691), Expect = 1e-72, Method: Composition-based stats.
Identities = 166/428 (38%), Positives = 238/428 (55%), Gaps = 20/428 (4%)
Query: 7 GDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKT 66
G++VPPP F P +L+++ G + PTPIQ Q PV L RD++ IA TGSGKT
Sbjct: 596 GENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKT 655
Query: 67 LVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEI 126
L +++P + L+ P++ GP +++ P+RELA Q D +F G
Sbjct: 656 LGYLIP-AFIHLRRYQNNPML---GPTVLVLAPTRELASQIQDEAVKF-------GRSSR 704
Query: 127 RPLLCI-GGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVD 185
C+ GG QL +++G IVVATPGRL D+L +K++L +L LDEADR++D
Sbjct: 705 VSCTCLYGGTSKGLQLRELERGADIVVATPGRLNDILEMRKISLHQVSFLVLDEADRMLD 764
Query: 186 LGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAG--AANLDVI 243
+GFE IR++ D RQTL+++AT PK++ A L PV VN+G AN +
Sbjct: 765 MGFEPQIRKIVDEIPRNRQTLMYTATWPKEVTKIAGDLLKDPVQVNIGSIDELVANKSIT 824
Query: 244 QEVEYV---KEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGK 300
Q VE V + R+ +L Q+ V++FC K D + + + A +IHG K
Sbjct: 825 QYVEVVPPLDKQRRLEQILRA-QERGSKVIIFCSTKKMCDQLARDIG-RSFGAASIHGDK 882
Query: 301 DQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRC 360
Q ER+N + F+ G+ +LVATDVA++GLD DI+ VINYD P IE+YVHRIGRTGR
Sbjct: 883 SQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRA 942
Query: 361 GKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEETMAKESGVKGCA 420
G TG++ TF ++ Q DL +L+ A Q +PP L E+ + G+
Sbjct: 943 GATGVSYTFFSE-QDWKYAGDLVKVLEGANQHVPPELQEMAARGAAGAPRNQAGGMSRWD 1001
Query: 421 YCGGLGHR 428
GG G+R
Sbjct: 1002 GPGGGGNR 1009
>Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase
DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related
sequence 2)
Length = 484
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 220/372 (59%), Gaps = 29/372 (7%)
Query: 50 LSGRDMIGIAFTGSGKTLVFVLPLI--MVAL------QEEMMMPIVPGEGPFGMIICPSR 101
L+GRD++ A TGSGKT F LP++ +VA E P +++ P+R
Sbjct: 1 LAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTR 60
Query: 102 ELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDL 161
ELA Q + ++F + G +R ++ GG M QL +++G I+VATPGRL D+
Sbjct: 61 ELAAQINEEAKKFSF---QTG---LRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDM 114
Query: 162 LAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPKKIQ 217
+ + K++L+ +YL +DEADR++D+GFE IR++ + K+ RQT+LFSAT P +IQ
Sbjct: 115 VERSKVSLEAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQ 174
Query: 218 NFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDARIIYLLECLQKTP----------P 267
A L + + VGR G++ ++Q+VE + + + YLL+ LQ+ P
Sbjct: 175 RLASDFLSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQQP 234
Query: 268 PVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVAS 327
LVF E K + D + +L KG A AIHG + Q+ERE+A+ FK G ++VATDVAS
Sbjct: 235 LTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVAS 294
Query: 328 KGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLK 387
+GLD P++ HVINYD+P IE+YVHRIGRTGR GK G AT F ++ + L L+
Sbjct: 295 RGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESD-HSLAKGLLELMT 353
Query: 388 EAKQRIPPVLAE 399
EAKQ +P L +
Sbjct: 354 EAKQDVPDWLVQ 365
>Os07g0301200 Similar to RNA helicase (Fragment)
Length = 512
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 152/384 (39%), Positives = 225/384 (58%), Gaps = 16/384 (4%)
Query: 33 KGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGP 92
KG +P+PIQ P +L GRD IGIA TGSGKT+ F +P +M ++ +M P
Sbjct: 110 KGFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALM-HVRRKMGEKSAKKGVP 168
Query: 93 FGMIICPSRELAKQTYDVIEQFLVPLKEAGYP-EIRPLLCIGGVDMRAQLDVVKKGVHIV 151
+++ P+RELA+Q DV L EAG P I + GG Q+ +K GV IV
Sbjct: 169 RVLVLSPTRELAQQIADV-------LCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIV 221
Query: 152 VATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSAT 211
+ TPGR+KDL+ L++ ++ LDEADR++D+GFE ++R + + RQT++FSAT
Sbjct: 222 IGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSAT 281
Query: 212 MPKKIQNFAKSAL-VKPVIVNVGRAG-AANLDVIQEVEYVKE---DARIIYLLECLQKTP 266
P + A+ + P+ V +G AAN DV+Q VE + + D+R++ LL+ K
Sbjct: 282 WPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQ 341
Query: 267 PP-VLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDV 325
VLVF K + + L +G AV++HG K Q +R A+ FK G +++ATDV
Sbjct: 342 RNRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDV 401
Query: 326 ASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHL 385
AS+GLD PD++ VINY P E+YVHRIGRTGR GK G+A TF + + + +L ++
Sbjct: 402 ASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQ-ENKGLAGELVNV 460
Query: 386 LKEAKQRIPPVLAELNDPLEDEET 409
L+EA Q +PP L + ++ +E+
Sbjct: 461 LREAGQVVPPALTKFGTHVKKKES 484
>Os01g0172200 WW/Rsp5/WWP domain containing protein
Length = 759
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 227/413 (54%), Gaps = 24/413 (5%)
Query: 29 KLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLP--LIMVALQEEMMMPI 86
K+++ G PTPIQ Q P+ L RD++ +A TGSGKTL +++P +++ LQ
Sbjct: 245 KVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR--- 301
Query: 87 VPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKK 146
+GP +++ P+RELA Q D ++F + I + GG QL +++
Sbjct: 302 ---DGPTVLVLSPTRELATQIQDEAKKFGRSSR------ISSVCLYGGAPKGPQLRDLER 352
Query: 147 GVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTL 206
G IVVATPGRL D+L ++++L YL LDEADR++D+GFE IR++ + +RQTL
Sbjct: 353 GADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTL 412
Query: 207 LFSATMPKKIQNFAKSALVKPVIVNVGRAG--AANLDVIQEVEYVKEDARIIYLLECLQK 264
+F+AT PK+++ A L PV VN+G AN + Q V+ + + L + L+
Sbjct: 413 MFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRS 472
Query: 265 TPP--PVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVA 322
P +++FC K D + L + A AIHG K Q ER++ + F++G+ +LVA
Sbjct: 473 QEPGSKIIIFCSTKRMCDQLARN-LARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVA 531
Query: 323 TDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDL 382
TDVA++GLD DI+ V+NYD P +E+YVHRIGRTGR G TG+A TF +Q DL
Sbjct: 532 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFF-CDQDSKYASDL 590
Query: 383 KHLLKEAKQRIPPVLAEL----NDPLEDEETMAKESGVKGCAYCGGLGHRVTD 431
+L+ A Q + L ++ + + G Y G R TD
Sbjct: 591 VKILEGANQSVSQQLRDMVSRGGYGGRSRRWASSDDSYGGRGYDSGYTSRSTD 643
>Os12g0481100 Similar to RNA helicase
Length = 832
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 214/404 (52%), Gaps = 21/404 (5%)
Query: 14 ARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPL 73
A F +L L P+LR G +PTPIQ +P+ L+GRD+ G A TGSGKT F LP+
Sbjct: 223 ANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPV 282
Query: 74 IMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIG 133
+ L +P + +I+ P+RELA Q + +IE+ A + +IR L +G
Sbjct: 283 LERLLFRPKRVPAIRV-----LILTPTRELAAQVHSMIEKL------AQFTDIRCCLIVG 331
Query: 134 GVDMRAQLDVVKKGVHIVVATPGRLKDLLAKK-KMNLDNCRYLTLDEADRLVDLGFEDDI 192
G+ + Q ++ IVVATPGR+ D L + L++ L LDEADRL++LGF +I
Sbjct: 332 GLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEI 391
Query: 193 REVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIV----NVGRAGAANLDVIQEVEY 248
+E+ +RQT+LFSATM ++I +L KPV + ++ R +V++
Sbjct: 392 QELIRMCPRRRQTMLFSATMTEEINELVTLSLNKPVRLEADPSLKRPATLTEEVVRIRRA 451
Query: 249 VKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENA 308
+ + + L CL+ V++F K + L G++A +HG Q +R A
Sbjct: 452 REANQEAVLLALCLKTFKDKVIIFSGTKHSAHRLKIIFGLSGMKAAELHGNLTQAQRLEA 511
Query: 309 IEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATT 368
+E FK + D L+ATDVA++G+D ++ VIN+ P + Y+HR+GRT R G+ G A T
Sbjct: 512 LELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGREGYAVT 571
Query: 369 FINKNQTETTLLDLKHLLKEAKQRI---PPVL--AELNDPLEDE 407
F+ + K + K RI PV A+L + LED+
Sbjct: 572 FVTDDDRSLLKAIAKKAGSQLKSRIVAEKPVAECAKLIEELEDQ 615
>Os03g0827700 Similar to ATP-dependent RNA helicase
Length = 723
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 197/364 (54%), Gaps = 17/364 (4%)
Query: 20 LRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQ 79
L LPE ++ L ++GI PIQ L L GRD+I A TG+GKTL F +P+I ++
Sbjct: 74 LGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLME 133
Query: 80 EEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRA 139
E+ + G P +++ P+RELAKQ I++ P++ + GGV
Sbjct: 134 EDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKE--------SAPKLSTVCVYGGVSYNV 185
Query: 140 QLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF 199
Q + + +GV +VV TPGR+ DL+ + L +YL LDEAD+++ +GFE+D+ +
Sbjct: 186 QQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQL 245
Query: 200 KAQRQTLLFSATMPKKIQNFAKSALVKPVIVN-VGR-----AGAANLDVIQEVEYVKEDA 253
A+RQ++LFSATMP ++ ++ L P+ ++ VG A L I K
Sbjct: 246 PAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTSKRT- 304
Query: 254 RIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFK 313
++ L + +VF + K D D + L + + A+HG Q +RE + F+
Sbjct: 305 -VLSDLITVYAKGGKTIVFTKTKRDADEV-SLALTNSIASEALHGDISQHQRERTLNGFR 362
Query: 314 NGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKN 373
GK VLVATDVA++GLD P++ +I+Y++P + E +VHR GRTGR GK G A +
Sbjct: 363 QGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNS 422
Query: 374 QTET 377
Q T
Sbjct: 423 QRRT 426
>Os08g0416100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 851
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/398 (33%), Positives = 215/398 (54%), Gaps = 21/398 (5%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 76
F + L E + R +R KG PTPIQ + +P++L+G D+ +A TGSGKT F++P+I
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 77 ALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVD 136
+ + G G +I+ P+R+LA QT +Q + +++ L +GG
Sbjct: 111 LRRHDA------GAGIRALILSPTRDLATQTLKFAQQL------GKFTDLKISLIVGGDS 158
Query: 137 MRAQLDVVKKGVHIVVATPGRLKDLLAK-KKMNLDNCRYLTLDEADRLVDLGFEDDIREV 195
M +Q + + + I++ATPGRL LA+ + +NL Y+ DEAD L LG + ++
Sbjct: 159 MESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDI 218
Query: 196 FDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKED--- 252
RQTLLFSAT+P+ + +FAK+ L P IV + + D+ ++++
Sbjct: 219 LHKLSDTRQTLLFSATLPQALADFAKAGLRDPQIVRLDLDKKISPDLKLAFFTLRQEEKL 278
Query: 253 ARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFF 312
A ++YL+ + ++F K V++++ +G+E +G DQE R I F
Sbjct: 279 AALLYLVRERISSEEQTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKF 338
Query: 313 KNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINK 372
+ K +L+ TDVA++GLD P + +V+N+D PA+ + +VHR+GR R G++G A TF+
Sbjct: 339 RARKTMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVT- 397
Query: 373 NQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEETM 410
++ LLDL HL R P EL L+D E M
Sbjct: 398 SEDMAYLLDL-HLFLSKPLRPAPTEEEL---LKDMEGM 431
>Os07g0647900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 540
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 206/384 (53%), Gaps = 32/384 (8%)
Query: 1 WHILVDGDDVPPPARDFRDL----RLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMI 56
+ I + G +VP P +F +L ++ L + G +PTPIQ Q +P++LSGR+
Sbjct: 128 FDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGRECF 187
Query: 57 GIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPG--EGPFGMIICPSRELAKQTYDVIEQF 114
A TGSGKTL F+ P+ +M I PG EG +I+CP+RELA QT ++
Sbjct: 188 ACAPTGSGKTLAFLFPI---------LMKIKPGSKEGVKAVILCPTRELAAQTTRECKKL 238
Query: 115 LVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRY 174
K + + D+ + I+++TP RL + K+ ++L Y
Sbjct: 239 AKGRKF--------YIKLMTKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLSRVEY 290
Query: 175 LTLDEADRLVDLGFEDDIREVFDHFKAQRQ----TLLFSATMPKKIQNFAKSALVKPVIV 230
L LDE+D+L +LGF + I V KA LFSAT+P I+ A++ + V V
Sbjct: 291 LVLDESDKLFELGFVEVIDSVV---KACSNPSIIRSLFSATLPDSIETLARTIMHDAVRV 347
Query: 231 NVGRAGAANLDVIQEVEYV-KEDARIIYLLECLQKT-PPPVLVFCENKADVDYIHEYLLL 288
VGR +A+ + Q++ + E +++ L + ++ PPVL+F ++K +++ L
Sbjct: 348 IVGRKNSASSLIKQKLIFAGTEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAF 407
Query: 289 KGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIE 348
V A IH D+E+R++A++ + GK VL+AT+V ++G+DF + VINYD P
Sbjct: 408 DDVRADVIHADLDEEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESAS 467
Query: 349 NYVHRIGRTGRCGKTGIATTFINK 372
Y+HRIGR+GR G++G A TF +
Sbjct: 468 AYIHRIGRSGRAGRSGEAITFFTE 491
>Os03g0669000 Similar to RNA helicase (Fragment)
Length = 472
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 196/369 (53%), Gaps = 17/369 (4%)
Query: 9 DVPPPAR---DFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGK 65
+ PPAR F +L + ++ G +PT IQ + +P L GRD+IG+ TGSGK
Sbjct: 32 EAEPPARRPSTFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGK 91
Query: 66 TLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPE 125
T F LP+I L+++ + F ++ P+RELA + + +QF G
Sbjct: 92 TGAFALPIIQALLKQDKPQAL------FACVLSPTRELA---FQIGQQFEALGSAIG--- 139
Query: 126 IRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKK-MNLDNCRYLTLDEADRLV 184
+ + +GGVD Q + K HIVV TPGRL D L K +L+ +YL LDEAD+L+
Sbjct: 140 LSCTVLVGGVDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLL 199
Query: 185 DLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQ 244
++ F+ + ++ + +R+T LFSATM K+ ++ L PV V V + + Q
Sbjct: 200 NVEFQKALDDILNVIPKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQ 259
Query: 245 EVEYVKEDARIIYLLECLQKTPPP-VLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQE 303
E +V D + +L+ L + P +++F + L +A++I G Q+
Sbjct: 260 EFYFVPADYKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQD 319
Query: 304 ERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKT 363
+R A+ FK ++L+ TDVAS+GLD + VINYD+P ++YVHR+GRT R G T
Sbjct: 320 KRLGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNT 379
Query: 364 GIATTFINK 372
G A + +N+
Sbjct: 380 GYAVSLVNQ 388
>Os02g0146600 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 209/387 (54%), Gaps = 19/387 (4%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 76
F D+ L E +LR + G +P+ IQ +G+ G D+I A +G+GKT F ++
Sbjct: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL-- 100
Query: 77 ALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVD 136
+++ +V + +++ P+RELA+Q IE+ + L + Y ++ C+GG
Sbjct: 101 ---QQLDYGLVECQS---LVLAPTRELAQQ----IEKVMRALGD--YLGVKVHACVGGTS 148
Query: 137 MRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVF 196
+R ++ GVH+VV TPGR+ D+L ++ + D+ + LDEAD ++ GF+D I ++F
Sbjct: 149 VREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIF 208
Query: 197 DHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQE--VEYVKEDAR 254
+ Q +FSATMP + + + KPV + V R L+ I++ V KED +
Sbjct: 209 QLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVEKEDWK 267
Query: 255 IIYLLECLQKTP-PPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFK 313
+ L + + ++F + VD++ + + + A HG DQ R+ + F+
Sbjct: 268 LDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFR 327
Query: 314 NGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKN 373
+G VL+ TD+ ++G+D + VINYD+P + ENY+HRIGR+GR G+ G+A F+ ++
Sbjct: 328 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 387
Query: 374 QTETTLLDLKHLLKEAKQRIPPVLAEL 400
E L D++ + +P +A+L
Sbjct: 388 D-ERMLFDIQRFYNVTIEELPANVADL 413
>Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 206/389 (52%), Gaps = 23/389 (5%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 76
F D+ L E +LR + G +P+ IQ +G+ G D+I A +G+GKT F ++
Sbjct: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL-- 100
Query: 77 ALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVD 136
+++ +V + +++ P+RELA+Q IE+ + L + Y ++ C+GG
Sbjct: 101 ---QQLDYAVVECQA---LVLAPTRELAQQ----IEKVMRALGD--YLGVKVHACVGGTS 148
Query: 137 MRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVF 196
+R ++ GVH+VV TPGR+ D+L ++ + D + LDEAD ++ GF+D I ++F
Sbjct: 149 VREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIF 208
Query: 197 DHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGR-----AGAANLDVIQEVEYVKE 251
++ Q +FSATMP + + + KPV + V R G V E E K
Sbjct: 209 QLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKL 268
Query: 252 DARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEF 311
D + L E L T ++F + VD++ + + + A HG DQ R+ +
Sbjct: 269 DT-LCDLYETLAITQS--VIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMRE 325
Query: 312 FKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFIN 371
F++G VL+ TD+ ++G+D + VINYD+P + ENY+HRIGR+GR G+ G+A F+
Sbjct: 326 FRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT 385
Query: 372 KNQTETTLLDLKHLLKEAKQRIPPVLAEL 400
++ E L D++ + +P +A+L
Sbjct: 386 RDD-ERMLFDIQRFYNVVIEELPANVADL 413
>Os09g0520700 Similar to RNA helicase
Length = 696
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 199/384 (51%), Gaps = 39/384 (10%)
Query: 2 HILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFT 61
+ GD+ P + R+ E + KL+ KGI PIQ +VL G D++G A T
Sbjct: 102 ELTASGDEDPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRART 161
Query: 62 GSGKTLVFVLPLI--MVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLK 119
G GKTL FVLP++ +V + G P +++ P+RELAKQ + +
Sbjct: 162 GQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFG 221
Query: 120 EAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDE 179
+ GG D R+Q ++KGV IVV TPGR+KD + K +N + ++ LDE
Sbjct: 222 ------LSACCVYGGSDYRSQEMAIRKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDE 275
Query: 180 ADRLVDLGFEDDIREVFDHFK--AQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGA 237
AD ++++GF DD+ + + + QTLLFSAT+P+ VK + + ++G
Sbjct: 276 ADEMLNMGFVDDVELILGKVEDVTKVQTLLFSATIPE---------WVKKLSLRFLKSGK 326
Query: 238 ANLDVIQEVEYVKEDARIIYL-LECLQKTPPPVL--------------VFCENKADVDYI 282
+D++ + E +K A + +L L C + V+ +F E K +
Sbjct: 327 KTVDLVGD-EKLKASASVRHLALPCNRAARAQVIPDIIRCYSRGGRTIIFTETKESASDL 385
Query: 283 HEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYD 342
L+ G + A+HG Q +RE + F++GK VLVAT+VA++GLD D+Q +I +
Sbjct: 386 SG--LIAG--SRALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQLIIQCE 441
Query: 343 MPAEIENYVHRIGRTGRCGKTGIA 366
P ++E Y+HR GRTGR G TG+A
Sbjct: 442 PPRDVEAYIHRSGRTGRAGNTGVA 465
>Os07g0633500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 501
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 195/373 (52%), Gaps = 37/373 (9%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 76
F +L L + ++ G+ PT +Q + +P L GRD++GIA TGSGKT F LP++
Sbjct: 79 FAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHR 138
Query: 77 ALQEEMMMPIVPGEGPFG---MIICPSRELAKQTYDVIEQFLVPLKEAGYP-EIRPLLCI 132
GE P+G + + P+RELA Q + EQF + G P +R L I
Sbjct: 139 L-----------GEDPYGVAALALAPTRELAAQ---LAEQF----RALGAPLGLRCLAAI 180
Query: 133 GGVDMRAQLDVVKKGVHIVVATPGRLKDL------LAKKKMNLDNCRYLTLDEADRLVDL 186
GG D Q + + H+VVATPGR+ L LAK ++L LDEADR++D+
Sbjct: 181 GGFDSLGQAKGLARRPHVVVATPGRIATLINDDPDLAKV---FARTKFLVLDEADRVLDI 237
Query: 187 GFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEV 246
FE+D+R +F +RQT LFSAT+ +++ + + G +D ++++
Sbjct: 238 NFEEDLRVIFGSLPKKRQTFLFSATISDNLRSLLELSGNNSYFFE-AYEGFKTVDTLKQL 296
Query: 247 E-YVKEDARIIYLLECLQKTPP----PVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKD 301
+V DA+ +YL L K V+VF Y+ L G AV++H K
Sbjct: 297 YIHVPPDAKELYLFYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKP 356
Query: 302 QEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG 361
Q R A+ FK+ K VL+ATDVAS+GLD + VINYD+P +Y+HR+GRT R
Sbjct: 357 QSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARAT 416
Query: 362 KTGIATTFINKNQ 374
+ G++ +FI +
Sbjct: 417 RGGLSISFITTQR 429
>Os01g0549700 Similar to RNA helicase (Fragment)
Length = 432
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 200/371 (53%), Gaps = 25/371 (6%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 76
FRD L +LR +++ G P+ +Q + +P + G D+I A +G GKT VFVL
Sbjct: 53 FRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS---- 108
Query: 77 ALQEEMMMPIVPGEGPFG-MIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGV 135
+LQ+ I P G G +++C +RELA Q E+F L PE++ + GGV
Sbjct: 109 SLQQ-----IDPVAGQVGALVLCHTRELAYQICHEFERFSKYL-----PEVKVAVFYGGV 158
Query: 136 DMRAQLDVVKKGV-HIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVD-LGFEDDIR 193
++ D++K HIVV TPGR+ L +K ++L N R+ LDE D+++D L D++
Sbjct: 159 HIKKHKDLLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQ 218
Query: 194 EVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVK--- 250
E+F +Q ++FSAT+ K+I+ K + P+ + V L + + Y+K
Sbjct: 219 EIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ-HYIKLSE 277
Query: 251 --EDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENA 308
++ ++ LL+ L V++F ++ + +++ L A++IH G QEER
Sbjct: 278 AEKNRKLNDLLDALDFNQ--VVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTR 335
Query: 309 IEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATT 368
+ FK G K +LVATD+ +G+D + VINYDMP ++Y+HR+GR GR G G+A T
Sbjct: 336 YKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAIT 395
Query: 369 FINKNQTETTL 379
F++ L
Sbjct: 396 FVSSASDSDVL 406
>Os01g0550000 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 432
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 200/371 (53%), Gaps = 25/371 (6%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 76
FRD L +LR +++ G P+ +Q + +P + G D+I A +G GKT VFVL
Sbjct: 53 FRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS---- 108
Query: 77 ALQEEMMMPIVPGEGPFG-MIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGV 135
+LQ+ I P G G +++C +RELA Q E+F L PE++ + GGV
Sbjct: 109 SLQQ-----IDPVAGQVGALVLCHTRELAYQICHEFERFSKYL-----PEVKVAVFYGGV 158
Query: 136 DMRAQLDVVKKGV-HIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVD-LGFEDDIR 193
++ D++K HIVV TPGR+ L +K ++L N R+ LDE D+++D L D++
Sbjct: 159 HIKKHKDLLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQ 218
Query: 194 EVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVK--- 250
E+F +Q ++FSAT+ K+I+ K + P+ + V L + + Y+K
Sbjct: 219 EIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ-HYIKLSE 277
Query: 251 --EDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENA 308
++ ++ LL+ L V++F ++ + +++ L A++IH G QEER
Sbjct: 278 AEKNRKLNDLLDALDFNQ--VVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTR 335
Query: 309 IEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATT 368
+ FK G K +LVATD+ +G+D + VINYDMP ++Y+HR+GR GR G G+A T
Sbjct: 336 YKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAIT 395
Query: 369 FINKNQTETTL 379
F++ L
Sbjct: 396 FVSSASDSDVL 406
>Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 198/392 (50%), Gaps = 29/392 (7%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 76
F + + E +LR + G +P+ IQ + + ++SGRD+I A +G+GKT + L + +
Sbjct: 33 FDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQI 92
Query: 77 ---ALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIG 133
A++E +I+ P+RELA QT V+ L Y I+ CIG
Sbjct: 93 VDTAVREVQ-----------ALILSPTRELAAQTERVM------LAIGDYINIQVHACIG 135
Query: 134 GVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIR 193
G + + ++ GVH+V TPGR+ D++ ++ + + L LDEAD ++ GF+D I
Sbjct: 136 GKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIY 195
Query: 194 EVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGR-----AGAANLDVIQEVEY 248
+V+ + + Q L SAT+P +I + PV + V R G V E E
Sbjct: 196 DVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEE 255
Query: 249 VKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENA 308
K D + L + L T ++FC K VD++ E + A+HG Q+ER+
Sbjct: 256 WKFDT-LCDLYDTL--TITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAI 312
Query: 309 IEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATT 368
+ F++G VL+ TDV ++GLD + VINYD+P E Y+HRIGR+GR G+ G+A
Sbjct: 313 MGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAIN 372
Query: 369 FINKNQTETTLLDLKHLLKEAKQRIPPVLAEL 400
F+ K L D++ +P +A+L
Sbjct: 373 FVKKEDIR-ILRDIEQYYSTQIDEMPMNVADL 403
>Os04g0533000 Similar to RNA helicase (Fragment)
Length = 498
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 192/384 (50%), Gaps = 20/384 (5%)
Query: 14 ARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPL 73
+F D L +L + EKG +P+PIQ + +P+ L+G D++ A G+GKT F +P
Sbjct: 123 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA 182
Query: 74 IMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIG 133
+ Q++ + +V I+ P+RELA QT V ++ LK I+ ++ G
Sbjct: 183 LEKIDQDKNAIQVV--------ILVPTRELALQTSQVCKELGKHLK------IQVMVTTG 228
Query: 134 GVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIR 193
G ++ + + + VH++V TPGR+ DL K L NC L +DEAD+L+ F+ I+
Sbjct: 229 GTSLKDDIVRLYQPVHLLVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQ 288
Query: 194 EVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDA 253
E+ + + RQ L+FSAT P ++ F L KP ++N+ + Q +V+E
Sbjct: 289 ELIRYLPSNRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLK-GITQFYAFVEERQ 347
Query: 254 RIIYLLECLQKTP-PPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFF 312
++ L K ++FC + V+ + + + G IH Q+ R F
Sbjct: 348 KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 407
Query: 313 KNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINK 372
+NG LV TD+ ++G+D + VIN+D P E Y+HR+GR+GR G G+A I
Sbjct: 408 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLI-- 465
Query: 373 NQTETTLLDLKHLLKEAKQRIPPV 396
T +L + +E I P+
Sbjct: 466 --TYEDRFNLYRIEQELGTEIKPI 487
>Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 198/392 (50%), Gaps = 29/392 (7%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 76
F + + + +LR + G +P+ IQ + + ++SGRD+I A +G+GKT + L + +
Sbjct: 33 FDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQI 92
Query: 77 ---ALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIG 133
A++E +I+ P+RELA QT V+ L + I+ CIG
Sbjct: 93 VDTAVREVQ-----------ALILSPTRELAAQTERVM------LAIGDFINIQVHACIG 135
Query: 134 GVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIR 193
G + + ++ GVH+V TPGR+ D++ ++ + + L LDEAD ++ GF+D I
Sbjct: 136 GKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIY 195
Query: 194 EVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGR-----AGAANLDVIQEVEY 248
+V+ + + Q L SAT+P +I + PV + V R G V E E
Sbjct: 196 DVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEE 255
Query: 249 VKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENA 308
K D + L + L T ++FC K VD++ E + A+HG Q+ER+
Sbjct: 256 WKFDT-LCDLYDTL--TITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAI 312
Query: 309 IEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATT 368
+ F++G VL+ TDV ++GLD + VINYD+P E Y+HRIGR+GR G+ G+A
Sbjct: 313 MGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAIN 372
Query: 369 FINKNQTETTLLDLKHLLKEAKQRIPPVLAEL 400
F+ K L D++ +P +A+L
Sbjct: 373 FVKKEDIR-ILRDIEQYYSTQIDEMPMNVADL 403
>Os02g0641800 Similar to RNA helicase (Fragment)
Length = 483
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 20/382 (5%)
Query: 16 DFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIM 75
+F D L +L + EKG +P+PIQ + +P+ L+G D++ A G+GKT F +P +
Sbjct: 110 EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 169
Query: 76 VALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGV 135
QE+ + +V I+ P+RELA QT V ++ LK I+ ++ GG
Sbjct: 170 KIDQEKNAIQVV--------ILVPTRELALQTSQVCKELGKHLK------IQVMVTTGGT 215
Query: 136 DMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREV 195
++ + + + VH++V TPGR+ DL K L +C L +DEAD+L+ F+ + ++
Sbjct: 216 SLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQL 275
Query: 196 FDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDARI 255
+ A RQ L+FSAT P ++ F L KP ++N+ + Q +V+E ++
Sbjct: 276 IRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLK-GITQFYAFVEERQKV 334
Query: 256 IYLLECLQKTP-PPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKN 314
L K ++FC + V+ + + + G IH Q+ R F+N
Sbjct: 335 HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRN 394
Query: 315 GKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ 374
G LV TD+ ++G+D + VIN+D P E Y+HR+GR+GR G G+A I
Sbjct: 395 GACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLI---- 450
Query: 375 TETTLLDLKHLLKEAKQRIPPV 396
T +L + +E I P+
Sbjct: 451 TYEDRFNLYRIEQELGTEIKPI 472
>Os01g0164500 Similar to ATP-dependent RNA helicase-like protein
Length = 647
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 196/369 (53%), Gaps = 34/369 (9%)
Query: 26 MLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMP 85
+++ L+ G + TP+Q +P++LS +D+ A TGSGKTL FV+P++ + + P
Sbjct: 34 VVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPS--P 91
Query: 86 IVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVK 145
P E G+II P+REL+ Q Y+V + F LK + +L +GG D++A+L ++
Sbjct: 92 PKPHE-VLGIIISPTRELSSQIYNVAQPFFATLKG-----VSSMLLVGGFDIKAELKKLE 145
Query: 146 K-GVHIVVATPGRLKDLLAK-KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQR 203
+ G +I+V TPG+L D++ + +N N L LDEADRL+DLGF+ I + R
Sbjct: 146 EEGANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLR 205
Query: 204 QTLLFSATMPKKIQNFAKSALVKPVIVNV-------GRAGA------ANLDVIQEVEYV- 249
+T LFSAT + ++ AK+ L PV V V G+ GA + + +EY+
Sbjct: 206 RTGLFSATQTEAVKELAKAGLRNPVRVEVKTEVKPTGKDGAQQELGPSKTPLGLRLEYMI 265
Query: 250 ----KEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYL----LLKGVEAVAIHGGKD 301
+ ++++ L +Q ++V+ A VDY L LKG + HG
Sbjct: 266 CEASNKSSQLVDFL--VQNNGKKIMVYFATCACVDYWAIVLPLLDSLKGSPIIPYHGKMK 323
Query: 302 QEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG 361
Q RE A+ F +LV TDVA++GLD P + ++ YD P + ++HR GRT R
Sbjct: 324 QGPREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFIHRAGRTARYD 383
Query: 362 KTGIATTFI 370
+ G A F+
Sbjct: 384 QEGDAIVFL 392
>Os01g0184500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 625
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 184/373 (49%), Gaps = 24/373 (6%)
Query: 16 DFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIM 75
F +L L E ++ L E GI +PT IQ G+P VL+G ++ + TGSGKTL ++LPL+
Sbjct: 111 SFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQ 170
Query: 76 VALQEEMM--MPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIG 133
+ ++E M M + P P +++CP+REL +Q + V + + + R + G
Sbjct: 171 LLRRDEAMLGMSMKP-RRPRAVVLCPTRELTEQVFRVAKSI------SHHARFRSTMVSG 223
Query: 134 GVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIR 193
G +R Q D + V +VV TPGR+ D + M + +YL LDEAD + D GF DIR
Sbjct: 224 GSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIR 283
Query: 194 EVFDHFKAQR--------QTLLFSATMPKKIQNFAKSALVKPVIVNVG----RAGAANLD 241
+ K + QT+L +ATM K +Q V + R A D
Sbjct: 284 KFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHD 343
Query: 242 VIQEVEYVKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKD 301
I+ + ++ +LE V+VFC + +L + V HG
Sbjct: 344 FIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVP 403
Query: 302 QEERENAIEFFKNGKKD--VLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGR 359
EER + F+N + D LV TD+A++GLD D+ HVI +D P+ +Y+HR GRT R
Sbjct: 404 AEERVENLNKFRNEEGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTAR 462
Query: 360 CGKTGIATTFINK 372
G G T+ + K
Sbjct: 463 MGAKGKVTSLVAK 475
>Os05g0110500 Similar to RNA helicase (Fragment)
Length = 591
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 207/435 (47%), Gaps = 82/435 (18%)
Query: 16 DFRDLRLPEPMLRKLREK-GIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLI 74
F DL L + L++K G PT IQ Q +PV +SG+ M+ A TG+GKTL ++ P++
Sbjct: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
Query: 75 MVALQEEMMMPIVP-GEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIG 133
+ +M P V +G F +++ P+REL Q Y + +Q + + + P +G
Sbjct: 84 HLL---QMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLV-----HRFHWLVPGYIMG 135
Query: 134 GVDMRAQLDVVKKGVHIVVATPGRLKDLLAK-KKMNLDNCRYLTLDEADRLVDLGFEDDI 192
G + + ++KG+ I++ATPGRL D L N R++ DEAD +++LGF +
Sbjct: 136 GENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKAL 195
Query: 193 REVFDHFKA---------------QRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGA 237
++ +H + +RQ LL SAT+ +K+ AK +L PV++ + +
Sbjct: 196 EDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS 255
Query: 238 A---------------------NLDVIQEVE-----------YVKED--ARIIYLLECLQ 263
+ N+ V Q V+ YVK +R+ LL L+
Sbjct: 256 SAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILK 315
Query: 264 -----KTPPPVLVFCENKADVDYIHEYLL-----------------LKGVEAVAIHGGKD 301
+ V+VF VD+ H L + +HG D
Sbjct: 316 SLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMD 375
Query: 302 QEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG 361
Q++R+ + F + K +LV+TDVA++GLDFP ++ +I YD P E YVHR+GRT R G
Sbjct: 376 QDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIG 435
Query: 362 KTGIATTFINKNQTE 376
+ G A F+ +T+
Sbjct: 436 EKGEALLFLQPIETD 450
>Os10g0503700 Similar to RNA helicase (Fragment)
Length = 521
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 190/382 (49%), Gaps = 19/382 (4%)
Query: 16 DFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIM 75
+F D L +L + EKG +P+PIQ + +P+ L+G D++ A G+GKT F +P +
Sbjct: 148 EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 207
Query: 76 VALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAG-YPEIRPLLCIGG 134
E+ + +V I+ P+RELA QT V KE G Y I+ ++ GG
Sbjct: 208 KIDPEKNAIQVV--------ILVPTRELALQTSQVC-------KELGKYLNIQVMVSTGG 252
Query: 135 VDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIRE 194
++ + + + VH++V TPGR+ DL K L +C L +DEAD+L+ F+ I +
Sbjct: 253 TSLKDDIMRLYQPVHLLVGTPGRILDLTRKGICVLKDCSMLVMDEADKLLAPEFQPSIEQ 312
Query: 195 VFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDAR 254
+ A RQ L+FSAT P +++F + L +P ++N+ + Q +V+E +
Sbjct: 313 LIHFLPANRQLLMFSATFPVTVKDFKEKYLPRPYVINLMDELTLK-GITQYYAFVEERQK 371
Query: 255 IIYLLECLQKTP-PPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFK 313
+ L K ++FC + V+ + + + G IH Q+ R F+
Sbjct: 372 VHCLNTLFLKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFR 431
Query: 314 NGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKN 373
NG LV TD+ ++G+ + VIN+D P E Y+HR+GR+GR G G+A I
Sbjct: 432 NGACRNLVCTDLFTRGIGIQAVNVVINFDFPKTSETYLHRVGRSGRFGHLGLAVNLITY- 490
Query: 374 QTETTLLDLKHLLKEAKQRIPP 395
+ L ++ L + IPP
Sbjct: 491 EDRFNLYRIEQELGTEIKTIPP 512
>Os07g0660000
Length = 444
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 189/381 (49%), Gaps = 56/381 (14%)
Query: 34 GIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPF 93
G PT IQ + +P L GRD+IG+ TGSGKT F LP+I L+ E P F
Sbjct: 2 GWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHR-PCF-----F 55
Query: 94 GMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLC---IGGVDMRAQLDVVKKGVHI 150
++ P+RELA Q + +QF EA I L C IGG+ +Q + K H+
Sbjct: 56 ACVLAPTRELAIQ---IAKQF-----EALGSAI-SLQCSVLIGGIPRTSQTISLAKRPHV 106
Query: 151 VV------------------------------ATPGRLKDLLAKKK-MNLDNCRYLTLDE 179
VV TPGRL D L K + + +YL LDE
Sbjct: 107 VVWWRSSRACLPEHLRKGFDSWQLWKERNSRVGTPGRLLDHLTNTKGFSFNKLKYLVLDE 166
Query: 180 ADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAAN 239
AD L+ + F+ + ++ + +R+T LFSATM +K++ ++ L PV V V +
Sbjct: 167 ADDLLKVDFQKAVDDILNVIPKERRTFLFSATMTEKVKKLRRACLKNPVKVEVASKYSLV 226
Query: 240 LDVIQEVEYVKEDARIIYLLECLQKTPPP-VLVF---CENKADVDYIHEYLLLKGVEAVA 295
+ Q++ V + YL+ L K P ++VF CE+ + + L K A++
Sbjct: 227 DTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRNLRFK---AIS 283
Query: 296 IHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIG 355
I G Q++R A+ F+ ++LV TDVAS+GLD + VINYD P ++Y+HR+G
Sbjct: 284 ISGQMSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVG 343
Query: 356 RTGRCGKTGIATTFINKNQTE 376
RT R G++G A + +N+ + E
Sbjct: 344 RTARAGQSGYAVSLVNQFEGE 364
>Os01g0618500 Similar to RNA helicase (Fragment)
Length = 536
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 203/417 (48%), Gaps = 34/417 (8%)
Query: 27 LRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPI 86
L+ +++ G + T +Q LP++L G D++ A TG+GKT+ F+LP I E++ +
Sbjct: 86 LKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAI------ELLSTL 139
Query: 87 VPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDM-RAQLDVVK 145
++ICP+RELA Q + L + G + IGG + + Q +
Sbjct: 140 PRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQ-----VVIGGTKLPQEQRSMQS 194
Query: 146 KGVHIVVATPGRLKDLLAKK---KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQ 202
I+VATPGRLKD L + + L LDEADRL+D+GF DI ++ +
Sbjct: 195 NPCQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDIEKIIAFIPKE 254
Query: 203 RQTLLFSATMPKKIQNFAKSALVKPV-IVNVGRAG--AANLDVIQEVEYVKEDARIIYLL 259
RQTLLFSAT+P++++ + A+ + +N + G + V Q D L
Sbjct: 255 RQTLLFSATVPEEVRQISHIAMKRGYKFINTVKEGDEETHSQVSQMYMVAPLDLHFSILY 314
Query: 260 ECLQK-----TPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKN 314
L+K V+VFC + E L + IH K Q R + F+
Sbjct: 315 NVLKKHIAEDADYKVIVFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSARTKVSDEFRK 374
Query: 315 GKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ 374
K +LV++DV+++G+D+PD+ VI +PA+ E Y+HR+GRTGR GK +
Sbjct: 375 SKGLILVSSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKGKD--GLGLLLLAP 432
Query: 375 TETTLLDLKHLLKEAKQRIPPVLAELNDPLEDE----ETMAKESGVKGCAYCGGLGH 427
ET L+ L ++ +P + + + ++D ET +KES AY LG+
Sbjct: 433 WETYFLNSVQDLSVSQAVVPTIDSSIQTGVKDALGRVETKSKES-----AYQAWLGY 484
>Os02g0826100 Similar to RNA helicase (Fragment)
Length = 811
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 211/418 (50%), Gaps = 30/418 (7%)
Query: 27 LRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLI---MVALQEEMM 83
++ L + G VQ T +Q LP+ L G+D++ A TG+GK+ F+LP I + A++
Sbjct: 354 VKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTN 413
Query: 84 MPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRA-QLD 142
+ P F +I+CP+RELA Q L + G + IGG + Q
Sbjct: 414 HRVSP---IFSLILCPTRELAIQLTAEANVLLKYHQGIGVQSL-----IGGTRFKLDQRR 465
Query: 143 VVKKGVHIVVATPGRLKDLLAKKK---MNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF 199
+ I+VATPGRL D + K + L + L LDEAD L+DLGF DI ++ D
Sbjct: 466 LESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADHLLDLGFRTDIEKIVDSL 525
Query: 200 KAQRQTLLFSATMPKKIQNFAKSALVKP-VIVNVGRAGAANLDVIQEVEYV----KEDAR 254
QRQTLLFSAT+PK+++ ++ L + V V+ GA E Y+ +
Sbjct: 526 PRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLGAVETPTKVEQLYLVMPHELHFH 585
Query: 255 IIYLL---ECLQKTPPPVLVFCENKADVDYIHEYLLLKGVE--AVAIHGGKDQEERENAI 309
++Y L Q+ V+VFC +++ Y++L+ ++ IH K Q R
Sbjct: 586 MVYRLLREHIDQEVDYKVIVFCTTAMVTEFM--YIMLRDLKLNVREIHSRKPQLYRTRIS 643
Query: 310 EFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 369
E F++ + +LV +DV+++G+++P + VI +P++ E+Y+HR+GRTGR GK+G
Sbjct: 644 EEFRDSSRLILVTSDVSTRGVNYPGVTLVIQVGVPSDREHYIHRLGRTGREGKSGKGILL 703
Query: 370 INKNQTETTLLDLKHLLKEAKQRIPPVLAELNDPLEDEETMAKESGVKGCAYCGGLGH 427
+ E L+ H L K + P + E+ ++ + S +K AY LG+
Sbjct: 704 LAP--WEEYFLNEIHDLPVQKSQTPNIDEEMKRKVDGSIKIVDMS-IKEAAYHAWLGY 758
>Os01g0618400 Similar to RNA helicase (Fragment)
Length = 594
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 203/419 (48%), Gaps = 32/419 (7%)
Query: 27 LRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV--ALQEEMMM 84
L+ +++ G + T +Q LPV+L G+D++ A TG+GKT+ F+LP I V AL
Sbjct: 138 LKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRD 197
Query: 85 PIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDM-RAQLDV 143
+ P +++CP+RELA Q ++ L + G + IGG + + Q +
Sbjct: 198 QLRPSINL--LVMCPTRELAIQVAVEAKKLLKYHRSLGVQ-----VVIGGTRLTQEQRSM 250
Query: 144 VKKGVHIVVATPGRLKDLLAKK---KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 200
I+VATPGRLKD + L + L LDEADRL+D+GF DI +
Sbjct: 251 QANPCQILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDIERIIASVP 310
Query: 201 AQRQTLLFSATMPKKIQNFAKSALVKPV-IVNVGRAG--AANLDVIQEVEYVKEDARIIY 257
+RQTLLFSAT+P++++ + A+ K +N + G + V Q D
Sbjct: 311 KERQTLLFSATVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQVSQMFMIAPLDLHFSI 370
Query: 258 LLECLQK-----TPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFF 312
L + L+K V++FC + E L + IH K Q R + F
Sbjct: 371 LYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEILSQLRLNIREIHSRKSQSARTKVSDEF 430
Query: 313 KNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINK 372
+ + +LV++DV+++G+D+PD+ VI +PA+ + Y+HR+GRTGR GK G +
Sbjct: 431 RKSRGLILVSSDVSARGVDYPDVTLVIQVGVPADRQQYIHRLGRTGRKGKEGQGLLLLAP 490
Query: 373 NQTETTLLDLKHLLKEAKQRIPPVLAE----LNDPLEDEETMAKESGVKGCAYCGGLGH 427
E L L ++ +P V + + D + E +KE CAY LG+
Sbjct: 491 --WEKYFLSSIKDLSISEATVPSVDSSTQTIVKDAVRKVEMRSKE-----CAYQAWLGY 542
>Os03g0219700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 198/421 (47%), Gaps = 69/421 (16%)
Query: 14 ARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPL 73
A+ F +L LP ++ +L ++G+ PT +Q +P++ D + ++TGSGKTL ++LP+
Sbjct: 130 AKSFEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPI 189
Query: 74 IMVALQEEMMMPIVPGE--------GPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPE 125
+ E+ P E G +I+ PSREL Q +E+ L P + +
Sbjct: 190 L-----SEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQ 244
Query: 126 IRPLLCIGGVDMRAQLDVVKKGVH-IVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLV 184
+ +GG + Q + +KK IVV TPGR+ ++ A K++ CR+L LDE D+L+
Sbjct: 245 L-----VGGANRSRQEEALKKNKPLIVVGTPGRISEISAGGKLHTHGCRFLVLDEVDQLL 299
Query: 185 DLGFEDDIREVFDHF-----------------KAQRQTLLFSATMPKKIQNFAKSALVKP 227
+ +D+ + +H +++RQT+L SAT+P + A+S P
Sbjct: 300 SFNYREDMHRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDP 359
Query: 228 VIV------------------------------NVGRAGAANLDVIQEVEYV--KEDARI 255
V+V +V +A +L E Y K ++
Sbjct: 360 VLVRAMSVVPLDSITVPRPVLSQTDANPNSPSNSVNQAAVNSLPPSLEHYYCISKAQHKV 419
Query: 256 IYLLECLQK-TPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKN 314
L C+ V+ F N + + L +G++A +HG + R ++ FK+
Sbjct: 420 DTLRRCIHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKD 479
Query: 315 GKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ 374
G+ VLV +++++GLD P+ VIN D+P + +Y HR GRTGR G+ G T + +
Sbjct: 480 GEFRVLVTNELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETE 539
Query: 375 T 375
T
Sbjct: 540 T 540
>Os02g0636300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 197/421 (46%), Gaps = 69/421 (16%)
Query: 14 ARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPL 73
A+ F +L LP ++ +L ++G+ PT +Q +P++ D + ++TGSGKTL ++LP+
Sbjct: 130 AKSFEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPI 189
Query: 74 IMVALQEEMMMPIVPGE--------GPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPE 125
+ E+ P E G +I+ PSREL Q +E+ L P + +
Sbjct: 190 L-----SEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQ 244
Query: 126 IRPLLCIGGVDMRAQLDVVKKGVH-IVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLV 184
+ +GG + Q + +KK IVV TPGR+ ++ A K++ +CR+L LDE D+L+
Sbjct: 245 L-----VGGANRSRQEEALKKNKPIIVVGTPGRISEISAAGKLHTHSCRFLVLDEVDQLL 299
Query: 185 DLGFEDDIREVFDHF-----------------KAQRQTLLFSATMPKKIQNFAKSALVKP 227
+ +D+ + +H +++RQT+L SAT+P + A+S P
Sbjct: 300 SFNYREDMHRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDP 359
Query: 228 VIVNV------------------------------GRAGAANLDVIQEVEYVKEDA--RI 255
V+V +A +L E Y A ++
Sbjct: 360 VLVRAMSVVPLESITVPRPVLSQPDANSNSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKV 419
Query: 256 IYLLECLQK-TPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKN 314
L C+ V+ F N + + L +G++A +HG + R ++ FK+
Sbjct: 420 DTLRRCIHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKD 479
Query: 315 GKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ 374
G+ VLV +++++GLD P+ VIN D+P + +Y HR GRTGR G+ G T + +
Sbjct: 480 GEFRVLVTNELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETE 539
Query: 375 T 375
T
Sbjct: 540 T 540
>Os04g0510400 Similar to RNA helicase (Fragment)
Length = 832
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 203/448 (45%), Gaps = 79/448 (17%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVL-SGRDMIGIAFTGSGKTLVFVLPLIM 75
+R+LRL ++ +R G +PTPIQ P G+D+IG A TGSGKTL F LP++
Sbjct: 200 WRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQ 259
Query: 76 VALQE-EMMMPIV----------PGEGPF-GMIICPSRELAKQTYDVIEQFLVPLKEAG- 122
L+E E M + E P +I+ P+RELAKQ D LKEA
Sbjct: 260 RLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCD-------HLKEAAK 312
Query: 123 YPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKK---MNLDNCRYLTLDE 179
+ I+ + +GG+ M Q ++K+ IVV TPGRL +L++ + L + + LDE
Sbjct: 313 FLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDE 372
Query: 180 ADRLVDLGFEDDIREVFDHFKA------------------------QRQTLLFSATMP-- 213
ADR+++ G +++ + + +RQT +FSAT+
Sbjct: 373 ADRMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALS 432
Query: 214 ----------------------KKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVK- 250
I+ +K A +KP V A+ L E +++
Sbjct: 433 ANFRKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIEC 492
Query: 251 ----EDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERE 306
+DA + Y+L ++FC + A + ++ L + G+ + H Q R
Sbjct: 493 SDDDKDAYLYYILSV--HGQGRTIIFCTSIAALRHLSSILRVLGINVLTNHAQMQQRARM 550
Query: 307 NAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIA 366
A++ F+ + +LVATD ++G+DF D++ VI+Y +P + Y+HR GRT R G +
Sbjct: 551 KAVDRFRESENSILVATDGFARGMDFDDVRTVIHYQLPHSTDVYIHRSGRTARKSMAGCS 610
Query: 367 TTFINKNQTETTLLDLKHLLKEAKQRIP 394
I+ K L KE Q+ P
Sbjct: 611 IALISPADKAKFYSLCKSLSKENLQQFP 638
>Os03g0728800 Similar to RNA helicase (Fragment)
Length = 670
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 204/425 (48%), Gaps = 60/425 (14%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLI-- 74
F +L L E + R LR+KG+ + TPIQ + +P++L G+D++ A TGSGKT ++LP++
Sbjct: 94 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPMLHE 153
Query: 75 MVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGG 134
++ L E + P I+ P+REL +Q ++ L+ + ++ +
Sbjct: 154 LLKLSAEGR---IRKSAPNVFILVPTRELCQQVHNEASS-LLEFCTSKLKVVQVNASMSD 209
Query: 135 VDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMN----LDNCRYLTLDEADRLVDLGFED 190
D++ L +I+V TP + ++K + ++ + LDEAD L+ ED
Sbjct: 210 KDIKVALS---GPPNILVTTPACVASCISKGIIRGSSIKESLSMMILDEADLLLSYRCED 266
Query: 191 DIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVI-QEVE-- 247
DI+ + H Q++L SAT I+ K L P I+ + G A D+I + V+
Sbjct: 267 DIKALVPHIPRSCQSILMSATSSADIEKLTKLLLHNPFILTLTEVGHAKDDLIPKNVQQF 326
Query: 248 YVKEDAR--IIYLL-----ECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGK 300
++ DA+ ++Y+L E +QK VL+F + + +L G+ + ++
Sbjct: 327 WISCDAKDKMLYILVLLKLELIQKK---VLIFVNSIDSAFKLRLFLEKFGIRSSVLNAEL 383
Query: 301 DQEERENAIEFFKNGKKDVLVATD-------------------VASK------------- 328
Q R + I+ F D L+ATD V+ K
Sbjct: 384 PQNSRLHIIQAFNARLFDYLIATDDNKSKEERQANKGNKKDSRVSRKQLQQTLDAEFGVV 443
Query: 329 -GLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLK 387
G+DF ++ V+NYDMP + YVHR+GRTGR KTG + + ++ + D++++LK
Sbjct: 444 RGIDFKNVFTVVNYDMPPDPAGYVHRVGRTGRANKTGASISLVSPKEN-GIFEDIENMLK 502
Query: 388 EAKQR 392
+ + R
Sbjct: 503 DVENR 507
>Os07g0143700 Similar to DEAD-Box RNA helicase-like protein
Length = 329
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 120/210 (57%), Gaps = 17/210 (8%)
Query: 26 MLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMP 85
++ +L +GI + PIQ L + G+DMIG A TG+GKTL F +P++ L+
Sbjct: 94 IVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKN- 152
Query: 86 IVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPL--LCI-GGVDMRAQLD 142
G P +I+ P+RELA+Q E + E PL LC+ GGV + Q+
Sbjct: 153 -GSGRNPLAIILAPTRELARQV------------EKEFKESAPLDSLCVYGGVPISHQMR 199
Query: 143 VVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQ 202
+ GV +VV TPGR+ DLL + +NL +++ LDEAD+++ +GF++D+ + ++
Sbjct: 200 ALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQN 259
Query: 203 RQTLLFSATMPKKIQNFAKSALVKPVIVNV 232
RQ++LFSATMP I+ L P+I+++
Sbjct: 260 RQSMLFSATMPSWIRKITSKYLKDPIIIDL 289
>Os06g0535100 Similar to Helicase pitchoune (Fragment)
Length = 500
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 124/208 (59%), Gaps = 14/208 (6%)
Query: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 76
F DL + + +R+ T IQ + +P ++ G D++ A TGSGKTL F++P I +
Sbjct: 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIEL 147
Query: 77 ALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEA-GYPEIRPLLCIGGV 135
+ + P G +++CP+RELA QT++V ++ + + GY IGG+
Sbjct: 148 LCR----LRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYHSQTLGY-------VIGGI 196
Query: 136 DMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNC-RYLTLDEADRLVDLGFEDDIRE 194
D+R + + + KG++++VATPGRL D + K K C + L +DEADR+++ FE+ +++
Sbjct: 197 DLRGEAEQLAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQ 256
Query: 195 VFDHFKAQ-RQTLLFSATMPKKIQNFAK 221
+F Q RQT+LFSAT +K+++FAK
Sbjct: 257 IFKLLPRQGRQTVLFSATQTEKVEDFAK 284
>Os03g0108600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 653
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 181/384 (47%), Gaps = 39/384 (10%)
Query: 15 RDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLI 74
R F+++ + +L LR G +P+ IQ VL G+ I +GSGKTL ++ P++
Sbjct: 252 RSFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVV 311
Query: 75 MVALQEEMM-MPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIG 133
+EE+ + P +++ P+ ELA Q + + ++G P R ++ G
Sbjct: 312 QNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRS----ISKSGVP-FRSMVATG 366
Query: 134 GVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLV-DLGFEDDI 192
G + QL+ + + + +++ATPGR LL + + L+N R + LDE D L + FE +
Sbjct: 367 GFRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVL 426
Query: 193 REVFDHFKAQRQTLLFSATMPKKIQN-----------------FAKSALVKPVIVNVGRA 235
++ Q L +AT+P I N S+ ++ ++V+ +
Sbjct: 427 HQLITVAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDC--S 484
Query: 236 GAANLDVIQEVEYVKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLK------ 289
G N + E + + + ++ ++E + ++FC NK + E L +
Sbjct: 485 GDDNEEKNPETAFSNKKSALVKIIE--ESPVRKTIIFC-NKIETCRKVENALRRVDRKAS 541
Query: 290 GVEAVAIHGGKDQEER-ENAIEFFKNGKKD--VLVATDVASKGLDFPDIQHVINYDMPAE 346
++ + H DQ++R N EF D LV TD AS+G+DF ++ HV+ +D P +
Sbjct: 542 QIKVLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDFANVNHVVLFDYPRD 601
Query: 347 IENYVHRIGRTGRCGKTGIATTFI 370
YV R+GRT R G +G F+
Sbjct: 602 PSEYVRRVGRTAR-GASGNGKAFV 624
>AK068197
Length = 181
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
Query: 168 NLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKP 227
NL YL LDEADR++D+GFE IR++ + RQTL +SAT P+++++ A+ L P
Sbjct: 4 NLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNP 63
Query: 228 VIVNVGRAG-AANLDVIQEVEYVKEDARIIYLLECLQK--TPPPVLVFCENKADVDYIHE 284
V +G AN + Q +E + E + L + L +L+F + K D D +
Sbjct: 64 YKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTR 123
Query: 285 YLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGL 330
L + G A++IHG K Q ER+ + FK+GK ++ ATDVA++GL
Sbjct: 124 QLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGL 169
>Os02g0795900 Similar to DEAD box-like RNA helicase (Fragment)
Length = 521
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 213/479 (44%), Gaps = 93/479 (19%)
Query: 21 RLPEPMLRKLREKGIVQPTPIQVQG-LPVVLSG---RDMIGIAFTGSGKTLVFVLPLI-M 75
RL +++ L+ GI P+QV L + G RD+ + TGSGKTL + LP++ M
Sbjct: 43 RLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAFERDICINSPTGSGKTLAYALPIVQM 102
Query: 76 VALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPL----------KEAGYPE 125
+A ++ + +++ P+R+LA Q +V + + P+ + + E
Sbjct: 103 LATRKVRCLR--------ALVVLPTRDLALQVKEVFDA-IAPVVGLSVGSAVGQSSIADE 153
Query: 126 IRPLLCIGGVDMRAQLDVV------KKGVHIVVATPGRLKDLLAKKK-MNLDNCRYLTLD 178
+ L+ + LD + V I+VATPGRL D ++ K +L++ +YL +D
Sbjct: 154 VSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKGFSLEHLQYLVVD 213
Query: 179 EADRLVDLGFEDDIREVFDHFKAQRQT--------------------------------- 205
E DR++ ++ + V ++ Q
Sbjct: 214 ETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNGETLLHPLTTIRRSGVERGFKGKSFP 273
Query: 206 ----LLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYV-KEDARIIYLLE 260
++ SAT+ + ++ L P+++N G+ +Q + V K + + + L+
Sbjct: 274 RLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKLVCKSNLKPLSLIV 333
Query: 261 CLQK-TPPPVLVFCENKADVDYIHEY-LLLKGVEAVAIHGG-----KDQEERENAIEFFK 313
LQ+ LVF + V+ H LL+ E + + + R ++ FK
Sbjct: 334 LLQELRGEKCLVFT---SSVESSHRLSTLLEFFEDLPFKFSEYSRLQRESTRRKTLDAFK 390
Query: 314 NGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKN 373
GK DVL+ TD ++G+ +++VINYDMP ++ Y+HR GRT R G++G TF+ K+
Sbjct: 391 EGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESGSCFTFLRKH 450
Query: 374 Q----------TETTLLDLKHLLKEAKQRIPPV----LAELNDPLEDEETMAKESGVKG 418
+ + + L L +E+ + + PV L +L + LE E T +SG K
Sbjct: 451 EVKAFDKMLKKADNSSCSLHSLPEESVETLRPVFSSALKKLEESLESEATKKSKSGDKA 509
>Os12g0611200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 157
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
Query: 88 PGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKG 147
PG+ P +++ P+RELAKQ V + + + + GG + Q+ + G
Sbjct: 7 PGKFPLAIVLAPTRELAKQ---------VEREFSDSSNVETICVYGGTPISQQIRQLNYG 57
Query: 148 VHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLL 207
V +V+ TPGR+ DLL + +NL R++ LDEAD+++ +GF++D+ + D +RQTL+
Sbjct: 58 VDVVIGTPGRVIDLLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETILDRVPPKRQTLM 117
Query: 208 FSATMPKKIQNFAKSALVKPVIVNV 232
FSATMP IQ + L PV +++
Sbjct: 118 FSATMPTWIQRLTQKYLKNPVTIDL 142
>Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (eIF4A-6) (eIF-4A-6)
(Fragment)
Length = 946
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 176/388 (45%), Gaps = 36/388 (9%)
Query: 22 LPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVF-VLPLIMVALQE 80
+ E ++ + + K + +P+ + +G+ + +G D+I + G+ TL +L + A E
Sbjct: 585 ISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGTTVTLCCGILQRLDYASTE 644
Query: 81 EMMMPIVPGEGPFGMIICPSRELAKQTYDVIE---QFLVPLKEAGYPEIRPLLCIGGVDM 137
+++ P+ +LA +T +VI QFL A C GG
Sbjct: 645 CQ-----------ALVLVPTHDLAHETQNVIGVLGQFLSAKAHA--------FC-GGTSA 684
Query: 138 RAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFD 197
++ GV + V TP + +L + + D+ R LDEAD ++ GF+D I +
Sbjct: 685 HEDQQILSTGVQVAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQ 743
Query: 198 HFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGR-AGAANLDVIQ-EVEYVKEDARI 255
+ Q FSA+M + + + KPV + V R ++V Q V KED ++
Sbjct: 744 FLPTKTQFGFFSASMSHEALEMCRKYMNKPVEIIVPRDEELEGINVKQFYVNVEKEDCKL 803
Query: 256 ---IYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFF 312
L + ++ T ++F + + E + KG AIHGG Q R+ A++ F
Sbjct: 804 DKLCGLFDTMEITRS--IIFVNTRHHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEF 861
Query: 313 KNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINK 372
++G +L+ TD+ +G+D I YD+P + Y+ + ++G+ G+ G+A +FI
Sbjct: 862 QSGSSRILITTDL--RGIDVLRAPAAIFYDLPTQPVCYLRHV-QSGQHGRKGVAISFITS 918
Query: 373 NQTETTLLDLKHLLKEAKQRIPPVLAEL 400
E ++ + +P +A+L
Sbjct: 919 TD-ERVFSTIQKFCNTQIEELPSNVADL 945
>Os07g0517000 DEAD/DEAH box helicase domain containing protein
Length = 524
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 203 RQTLLFSATMPKKIQNFAKSALVKPVIVNVGR-AGAANLDVIQEVEYVKEDARIIYLLEC 261
RQTLLFSAT K +++ A+ +L P ++V A A D +++ + + + +L
Sbjct: 11 RQTLLFSATQTKSVKDLARVSLKDPEYISVHEEATTATPDTLEQYAMIVPLEQKLNMLWS 70
Query: 262 LQKT--PPPVLVFCENKADVDYIHEYL--LLKGVEAVAIHGGKDQEERENAIEFFKNGKK 317
K +LVF + V +++E L G+ +HG E ++ + FK G
Sbjct: 71 FIKRHLKSRILVFLSSVKQVKFVYEVFKKLRPGISLRCMHGRMKYEVQQAIVAEFKEGH- 129
Query: 318 DVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFI 370
VL +TD+ ++GLD D+ V+ D P I Y+HR+GRT R K G A F+
Sbjct: 130 SVLFSTDIFARGLDIEDVDWVVQVDCPENIALYIHRVGRTARYNKRGKALIFL 182
>Os02g0201900 DEAD/DEAH box helicase domain containing protein
Length = 124
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 295 AIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 354
+IHG K ER ++ F G+ V+V T V +G+D ++ VI +DMP I+ YVH++
Sbjct: 1 SIHGDKTMNERRESLRRFLTGEVSVVVCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQV 60
Query: 355 GRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLA 398
GR R G G+A F+N+ + +L +LK A IP LA
Sbjct: 61 GRASRMGVEGMAIVFVNE-EDRNLFRELVQILKTAGAPIPRELA 103
>AK063048
Length = 250
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 293 AVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH 352
+V IH Q +R ++ FK+ + +L ATDVAS+GLD P + +IN+++P + YVH
Sbjct: 81 SVEIHSLMKQRQRIASLAKFKSLQVPILFATDVASRGLDIPSVDLIINHNVPFVPKEYVH 140
Query: 353 RIGRTGRCGKTGIATTFINK 372
R+GRT R G+ G A T + +
Sbjct: 141 RVGRTARAGRCGTAITLVTQ 160
>Os04g0486800 ATP-dependent DNA helicase RecQ family protein
Length = 873
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 259 LECLQKTPP-----PVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFK 313
L L K+PP ++V+C+ +A+ D++ +YL + A + H G + R E F
Sbjct: 489 LMLLLKSPPFVDMRSIIVYCKFQAETDFVSKYLCDNNITAKSYHSGLLIKNRSRVQELFC 548
Query: 314 NGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGK 362
+ K V+VAT GLD D++ VI+Y +P +E Y+ GR GR G+
Sbjct: 549 SNKIRVVVATVAFGMGLDKSDVEGVIHYSLPESLEEYIQETGRAGRDGR 597
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.140 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,932,223
Number of extensions: 703039
Number of successful extensions: 2657
Number of sequences better than 1.0e-10: 55
Number of HSP's gapped: 2498
Number of HSP's successfully gapped: 58
Length of query: 460
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 356
Effective length of database: 11,605,545
Effective search space: 4131574020
Effective search space used: 4131574020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)