BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0454500 Os08g0454500|Os08g0454500
         (250 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os08g0454500  Winged helix repressor DNA-binding domain cont...   519   e-147
Os08g0290700  Winged helix repressor DNA-binding domain cont...   243   1e-64
Os08g0169300  Winged helix repressor DNA-binding domain cont...   238   4e-63
Os11g0305400  Winged helix repressor DNA-binding domain cont...   198   3e-51
Os11g0306400  Similar to Herbicide safener binding protein        194   4e-50
Os07g0463600  Winged helix repressor DNA-binding domain cont...   192   2e-49
Os05g0515600  Similar to O-methyltransferase ZRP4 (EC 2.1.1....   187   8e-48
Os11g0307300  Winged helix repressor DNA-binding domain cont...   184   5e-47
Os11g0303600  Similar to Herbicide safener binding protein        183   1e-46
Os05g0515500  Similar to O-methyltransferase ZRP4 (EC 2.1.1....   179   1e-45
Os07g0464200  Winged helix repressor DNA-binding domain cont...   177   7e-45
Os12g0444800  Similar to O-methyltransferase ZRP4 (EC 2.1.1....   177   9e-45
Os01g0753300                                                      173   1e-43
Os10g0118200  Similar to O-methyltransferase ZRP4 (EC 2.1.1....   169   2e-42
Os11g0235500  Similar to Herbicide safener binding protein        169   2e-42
Os11g0306300  Similar to Herbicide safener binding protein        168   3e-42
Os09g0344500  Similar to O-methyltransferase ZRP4 (EC 2.1.1....   165   3e-41
Os06g0240800  Winged helix repressor DNA-binding domain cont...   162   2e-40
Os11g0304050  Winged helix repressor DNA-binding domain cont...   161   5e-40
Os07g0462800                                                      160   8e-40
Os04g0196200  Winged helix repressor DNA-binding domain cont...   158   3e-39
Os06g0281300  Similar to O-methyltransferase ZRP4 (EC 2.1.1....   158   4e-39
Os11g0303300  Winged helix repressor DNA-binding domain cont...   146   2e-35
Os11g0539500  Winged helix repressor DNA-binding domain cont...   141   5e-34
Os12g0445200  Winged helix repressor DNA-binding domain cont...   139   2e-33
Os10g0118000  Similar to O-methyltransferase ZRP4 (EC 2.1.1....   100   7e-22
Os04g0175900  Winged helix repressor DNA-binding domain cont...    96   3e-20
Os12g0202700  Winged helix repressor DNA-binding domain cont...    86   3e-17
Os04g0104900  Similar to 0-methyltransferase (EC 2.1.1.6) (F...    85   6e-17
Os12g0240900  Similar to Caffeic acid 3-O-methyltransferase ...    68   5e-12
Os08g0157500  Similar to Caffeic acid 3-O-methyltransferase ...    64   9e-11
>Os08g0454500 Winged helix repressor DNA-binding domain containing protein
          Length = 250

 Score =  519 bits (1336), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/250 (100%), Positives = 250/250 (100%)

Query: 1   MDQKQDEILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPEL 60
           MDQKQDEILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPEL
Sbjct: 1   MDQKQDEILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPEL 60

Query: 61  LGTLPLAANKRSCLPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRGI 120
           LGTLPLAANKRSCLPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRGI
Sbjct: 61  LGTLPLAANKRSCLPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRGI 120

Query: 121 FVLGNWLTSSDENTPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHECAEV 180
           FVLGNWLTSSDENTPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHECAEV
Sbjct: 121 FVLGNWLTSSDENTPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHECAEV 180

Query: 181 FVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIVEFVAGDMMHFVP 240
           FVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIVEFVAGDMMHFVP
Sbjct: 181 FVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIVEFVAGDMMHFVP 240

Query: 241 SADVVLLKVL 250
           SADVVLLKVL
Sbjct: 241 SADVVLLKVL 250
>Os08g0290700 Winged helix repressor DNA-binding domain containing protein
          Length = 375

 Score =  243 bits (620), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 129/262 (49%), Positives = 160/262 (61%), Gaps = 26/262 (9%)

Query: 15  ELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCL 74
           E LQA AELW  TF YLK++AL CA++LGIPNAIHR GGSASL EL+ ++P+   ++  L
Sbjct: 18  EFLQAHAELWNLTFSYLKAMALECAIKLGIPNAIHRCGGSASLSELVISIPVPETRKPHL 77

Query: 75  PRLMRFLVSFGIFKED---ISREGTTTTTSVYQLTPVSRLLVDAS-----SRGIFVLG-- 124
           PRLMRFL + G+F  D   I  E T     +Y+LTP+SRLLVD S     S   FVL   
Sbjct: 78  PRLMRFLAAVGVFSLDNPTIDEEVTEKGMGIYRLTPLSRLLVDGSIGGHGSLSPFVLSQT 137

Query: 125 ------------NWLTSSDENT----PFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHF 168
                       +W  + D+      PF  AHG D W     DA  + +FN GM SDS  
Sbjct: 138 TKYHVSAAMNLSDWFMTEDKEVAIEMPFRAAHGTDLWGVMSRDANMNEVFNAGMGSDSRL 197

Query: 169 VVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIV 228
            +N +I +C EVF G+ SLVDVGG  G  A+ IA AFPHIKC VLDLP+VI     DGI+
Sbjct: 198 AINFIISKCGEVFEGISSLVDVGGGTGTTARDIAKAFPHIKCSVLDLPNVIDTITVDGII 257

Query: 229 EFVAGDMMHFVPSADVVLLKVL 250
           E++AGDMM  +P  D VLLK +
Sbjct: 258 EYIAGDMMEQIPPTDAVLLKYI 279
>Os08g0169300 Winged helix repressor DNA-binding domain containing protein
          Length = 315

 Score =  238 bits (606), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 123/221 (55%), Positives = 148/221 (66%), Gaps = 12/221 (5%)

Query: 34  IALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCLPRLMRFLVSFGIFKEDISR 93
           +AL+CA++LGIP+AIHRNGGSASLP+LL TLP+A NKR  L RLMRFL   GIF      
Sbjct: 1   MALKCAIDLGIPSAIHRNGGSASLPDLLATLPIAENKRPFLHRLMRFLTVSGIF------ 54

Query: 94  EGTTTTTSVYQLTPVSRLLVDASSRGIF----VLGNWLTSSDENTPFGMAHGMDFWDFTG 149
             T+    VYQLT VSRLLVD+    +      LG W     + TPF MAHG+D W    
Sbjct: 55  --TSADDGVYQLTRVSRLLVDSIPLNLLPSFLCLGEWFRDGGDTTPFAMAHGIDVWGAMS 112

Query: 150 HDAEYSMLFNKGMASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIK 209
            D   +  F+  MA+DS F+  I I    E F+ V SLVDVGG +G+MA+AI  AFPHIK
Sbjct: 113 LDRALAAGFSASMAADSKFLAEIAIRRHVEAFMNVSSLVDVGGGDGSMARAIVKAFPHIK 172

Query: 210 CYVLDLPHVIHGTPTDGIVEFVAGDMMHFVPSADVVLLKVL 250
           C VLDLPHV+ G P DG VE+VAGDMM FVP A+VVLLK++
Sbjct: 173 CLVLDLPHVVRGIPADGFVEYVAGDMMDFVPPANVVLLKLV 213
>Os11g0305400 Winged helix repressor DNA-binding domain containing protein
          Length = 368

 Score =  198 bits (504), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/277 (41%), Positives = 151/277 (54%), Gaps = 32/277 (11%)

Query: 1   MDQKQDEILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPEL 60
           M  +   +L     ELLQAQA+LW H+  Y+ S++L+C ++LGIP AIHR GG+ASLP+L
Sbjct: 1   MAAQAPTMLAPTNEELLQAQADLWRHSLCYITSLSLQCVIKLGIPTAIHRAGGAASLPDL 60

Query: 61  LGTLPLAANKRSCLPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRGI 120
           +  L L  +K   L RLMR LV  G+F  D      TT T  Y+LTP+S LLVD    G 
Sbjct: 61  VTALSLPPSKLPFLRRLMRLLVHSGVFAAD-----DTTDTGTYRLTPLSCLLVDGDDDGA 115

Query: 121 FV-------------------------LGNWLTSSDENTPFGMAHGMDFWD--FTGHDAE 153
            +                         L +W+     +  F   HG   +D      D E
Sbjct: 116 AIVDGHPSQVPTVLAMGSRHCVEAAMGLADWIKKDSPSLLFEDVHGATPFDESMADLDPE 175

Query: 154 YSMLFNKGMASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVL 213
              L N+G+A+        V+ EC EVF G+ SL D GG +GA A+ I +AFPH+KC VL
Sbjct: 176 THGLLNEGLAAHDGSGFAAVLRECREVFQGLESLTDCGGGDGATARTIVEAFPHVKCTVL 235

Query: 214 DLPHVIHGTPTDGIVEFVAGDMMHFVPSADVVLLKVL 250
           DLP VI    TDG+V +VAGDM+ F+P A  V+LKV+
Sbjct: 236 DLPRVIGDKTTDGVVSYVAGDMLSFIPPAQAVMLKVV 272
>Os11g0306400 Similar to Herbicide safener binding protein
          Length = 368

 Score =  194 bits (494), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/262 (43%), Positives = 156/262 (59%), Gaps = 29/262 (11%)

Query: 14  AELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSC 73
           AELLQAQA+LW H+  YL S  LRCA++LGIP AIHR GG+AS+P L+  L L A+K+  
Sbjct: 14  AELLQAQADLWRHSLYYLTSTGLRCAIKLGIPTAIHRLGGAASVPGLMTKLSLPASKQPF 73

Query: 74  LPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDA------SSRGIFVLG--- 124
           L RLMR LV+ G+F    + E        Y LTP+SR+LVD        S+  FVL    
Sbjct: 74  LRRLMRVLVTNGVF----AAEHNDGEVERYCLTPLSRILVDGVVADEHHSQTSFVLAATS 129

Query: 125 -NWLTSS---DE----------NTPFGMAHGMDFWDFTGH--DAEYSMLFNKGMASDSHF 168
            ++L ++   DE           +PF   HG   +D +    D E   + N+G+A+  + 
Sbjct: 130 RHYLEAALGLDEWFRKDVAPPLPSPFEDVHGASLFDESTALLDPELDAVVNEGLAAHDNL 189

Query: 169 VVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIV 228
            +  ++ EC ++F G+RSL D  G +G  A+AIA A+PH+KC VLDLP VI   P DG+V
Sbjct: 190 GIGTILRECRDLFRGLRSLTDCCGGDGTTARAIAKAYPHVKCTVLDLPKVIDKAPNDGVV 249

Query: 229 EFVAGDMMHFVPSADVVLLKVL 250
            +VAGD+ H VP A  V+LK++
Sbjct: 250 NYVAGDLFHTVPPAQAVMLKLV 271
>Os07g0463600 Winged helix repressor DNA-binding domain containing protein
          Length = 360

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/264 (42%), Positives = 150/264 (56%), Gaps = 31/264 (11%)

Query: 12  DRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKR 71
           +  +LLQA  EL  H+ GY++S+AL CA +LG+ +AIH  GG A++ +L   L L  +K 
Sbjct: 2   EHEQLLQASTELMNHSLGYIRSMALGCAAKLGVADAIHHAGGRATMDDLRAALSLHPSKL 61

Query: 72  SC-LPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDAS-------------- 116
              L R+MR LV+ G+F    + +       +Y++TPVS LLV A+              
Sbjct: 62  PYFLRRVMRVLVASGVF----AHDEEEDDDDIYRVTPVSSLLVTATGGNGGRSLLPFVLL 117

Query: 117 --SRGIFV-----LGNWLTSSDENTPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFV 169
             S  I+V     +  WLTS +E TPF M HG   W     D E   LFN  MA+DS F+
Sbjct: 118 QLSPPIYVTPATSMAEWLTSGEEETPFEMTHGAGLWTVCSRDPELGELFNDAMAADSAFI 177

Query: 170 VNIVIHECA-EVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTD--- 225
           +++ I     +VF  + SLVDV G  G  A+ +A AFPHIKC VLDLPHVI   P D   
Sbjct: 178 MDVAIRGAGRQVFDKITSLVDVAGGTGTAARVVAAAFPHIKCTVLDLPHVIDSIPADHRG 237

Query: 226 -GIVEFVAGDMMHFVPSADVVLLK 248
             +V+FVAGDMM F+P AD +LLK
Sbjct: 238 RDVVKFVAGDMMDFIPRADALLLK 261
>Os05g0515600 Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)
          Length = 370

 Score =  187 bits (474), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 106/254 (41%), Positives = 143/254 (56%), Gaps = 22/254 (8%)

Query: 16  LLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCLP 75
           LL AQ EL+ +TF  +KS+AL+ A++LGI +A+HR+GG+A+L E+   + L  +K  CL 
Sbjct: 19  LLDAQLELYSNTFAVIKSMALKSALDLGIADAVHRHGGAATLAEIASEVALHPSKIPCLR 78

Query: 76  RLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASS-RGIFVL----------- 123
           RLMR L   G+F   +          VY+LTP SRLLV +S+  GI  +           
Sbjct: 79  RLMRALTVSGVFAAAVKPGDGGGGEPVYELTPSSRLLVGSSNLSGIMSMILHPTLVVPFL 138

Query: 124 --GNWLTSSDENTP-------FGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVI 174
             G WL   D   P       F  AHG   W+  G DA +  L N GM SDS  +++ V+
Sbjct: 139 GVGEWLRR-DREPPEEDPYCIFKQAHGRSLWELAGRDAAFDALINDGMVSDSRVIMDYVV 197

Query: 175 HECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIVEFVAGD 234
            E  EVF G+ SLVD+ G  GA A+ I+ AFP ++C V+DL HV+   P    VE++AGD
Sbjct: 198 REHGEVFRGIASLVDLAGGLGAAAQVISKAFPEVRCSVMDLGHVVAKAPAGTDVEYIAGD 257

Query: 235 MMHFVPSADVVLLK 248
           M   VP AD V LK
Sbjct: 258 MFESVPPADAVFLK 271
>Os11g0307300 Winged helix repressor DNA-binding domain containing protein
          Length = 370

 Score =  184 bits (467), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/275 (40%), Positives = 153/275 (55%), Gaps = 31/275 (11%)

Query: 1   MDQKQDEILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPEL 60
           M  +   I   + AEL+QAQA+LW H+  YL S+ LRCAVELGIP  IH  GG+A++P+L
Sbjct: 1   MAAQTQTIQVPNDAELMQAQADLWRHSLYYLTSMGLRCAVELGIPTTIHGLGGAATVPDL 60

Query: 61  LGTLPLAANKRSCLPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDA----- 115
           +  L L  NK     RLMR LV+  +F    S +G  T    ++LTP+SR+LVD      
Sbjct: 61  MAALSLPENKLPFFRRLMRVLVTARVFA---SADGGETER--FRLTPLSRILVDGVVADE 115

Query: 116 -SSRGIFVLGN--------------WLT---SSDENTPFGMAHGMDFWDFTGH--DAEYS 155
             S+  FVLG               W     +S   +PF   HG   +D +    D E  
Sbjct: 116 HHSQRCFVLGTTSRHYVDAAFALSEWFKKDLASPVPSPFEDLHGARLFDESTPLLDPELD 175

Query: 156 MLFNKGMASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDL 215
              N+G+A+  +  +  ++ EC ++F GVRSL D  GR+GA A+AI  A+PHIKC VLDL
Sbjct: 176 ATVNEGLAAHDNLGIGTLLRECRDLFKGVRSLTDCCGRHGATARAIVKAYPHIKCTVLDL 235

Query: 216 PHVIHGTPTDGIVEFVAGDMMHF-VPSADVVLLKV 249
           P ++   P DG+V +VAGD     +P A  V+LKV
Sbjct: 236 PRLVDHAPRDGVVNYVAGDAFQCTIPPAQAVMLKV 270
>Os11g0303600 Similar to Herbicide safener binding protein
          Length = 374

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/266 (40%), Positives = 145/266 (54%), Gaps = 33/266 (12%)

Query: 15  ELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCL 74
           ELL AQA+LW H+  ++ S+A +CAV+LGIP AIHR GG+ASLP+L+  L L   K   L
Sbjct: 16  ELLHAQADLWRHSLYFVTSMAFQCAVKLGIPTAIHRAGGTASLPDLVAALSLPPAKLPFL 75

Query: 75  PRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRGIFV------------ 122
            RLMR LV  G+F    + + TT +   Y+LTP+S LLV+       V            
Sbjct: 76  RRLMRLLVHSGVFA---AADDTTGSAGTYRLTPLSWLLVEGEGGAPVVDGHPCQVPVVLA 132

Query: 123 ------------LGNW----LTSSDENTPFGMAHGMDFWD--FTGHDAEYSMLFNKGMAS 164
                       L  W    + ++   +PF   HG   +D        E   +FN+ +A+
Sbjct: 133 GTSRHFVEAAMGLAEWFRKDVPAAAPPSPFEEVHGAVLFDESMASLHPEVDTVFNQALAA 192

Query: 165 DSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPT 224
             H     V+ EC+EVF GV+SL D  G +GA AKAI +AFPHIKC VLD P VI     
Sbjct: 193 YDHSGFATVLRECSEVFQGVQSLTDCRGGDGAAAKAIVEAFPHIKCTVLDFPRVIGNKRG 252

Query: 225 DGIVEFVAGDMMHFVPSADVVLLKVL 250
           DG+V +VAGDM   +P A  V+LK++
Sbjct: 253 DGVVNYVAGDMFRAIPPAQAVMLKLV 278
>Os05g0515500 Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)
          Length = 367

 Score =  179 bits (455), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/254 (40%), Positives = 141/254 (55%), Gaps = 22/254 (8%)

Query: 16  LLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCLP 75
           LL AQ EL+ +TF  +KS+AL+ A++L I +A+H +GG+A+L E+   + L  +K  CL 
Sbjct: 16  LLDAQLELYWNTFAVIKSMALKSALDLRIADAVHLHGGAATLAEIASEVALHPSKIPCLR 75

Query: 76  RLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASS-RGIFVL----------- 123
           RLMR L   G+F   +          VY+LTP SRLLV +S+  GI  +           
Sbjct: 76  RLMRALTVSGVFAAAVKPGDGGGGEPVYELTPSSRLLVGSSNLSGIMSMILHPTLVVPFL 135

Query: 124 --GNWLTSSDENTP-------FGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVI 174
             G WL   D   P       F  AHG   W+  G DA +  L N GM SDS  +++ V+
Sbjct: 136 GVGEWL-RRDREPPEEDPYCIFKQAHGRSLWELAGRDAAFDALINDGMVSDSRVIMDYVV 194

Query: 175 HECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIVEFVAGD 234
            E  EVF G+ SLVD+ G  GA A+ I+ AFP ++C V+DL HV+   P    VE++AGD
Sbjct: 195 REHGEVFRGIASLVDLAGGLGAAAQVISKAFPEVRCSVMDLGHVVAKAPAGTDVEYIAGD 254

Query: 235 MMHFVPSADVVLLK 248
           M   VP AD V LK
Sbjct: 255 MFESVPPADAVFLK 268
>Os07g0464200 Winged helix repressor DNA-binding domain containing protein
          Length = 350

 Score =  177 bits (449), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/254 (44%), Positives = 145/254 (57%), Gaps = 23/254 (9%)

Query: 12  DRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKR 71
           +  +L+QA  EL  H+ GY++S+AL CA +LG+ +AIHR GG A+L +L   L L   K 
Sbjct: 4   EHEQLVQASTELMHHSLGYVRSMALGCAAKLGVADAIHRAGGRATLHDLHAALSLHPTKL 63

Query: 72  SCLPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRGI-FVL------- 123
             L R+MR LV+ G+F +    E        Y+LTPVS LLV A    + FVL       
Sbjct: 64  PFLRRVMRVLVASGVFAQVKEEEDH------YRLTPVSSLLVTAGRTLLPFVLLQHSPLC 117

Query: 124 -------GNWLTSSDENTPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHE 176
                    WL + +E T F MAHG   W       E    FN  MA+DS F+++  I  
Sbjct: 118 VTPATSMAEWLKTGEEETAFEMAHGAGLWGACRRAPELGDFFNDAMAADSAFIMDAAIRG 177

Query: 177 CAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTD--GIVEFVAGD 234
             +VF  + SLVDV G  GA A+A+A AFPHIKC VLDLPHVI   P D   +V+FVAGD
Sbjct: 178 ARQVFDKITSLVDVAGGTGAAARAVAAAFPHIKCTVLDLPHVIDSIPVDHGDVVQFVAGD 237

Query: 235 MMHFVPSADVVLLK 248
           MM F+P AD +LLK
Sbjct: 238 MMDFIPQADALLLK 251
>Os12g0444800 Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)
          Length = 363

 Score =  177 bits (448), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 105/266 (39%), Positives = 145/266 (54%), Gaps = 21/266 (7%)

Query: 4   KQDEILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGT 63
           K +     D    L A  EL+ +TF  +KS+AL+ A++LGI +AIH +GG+A+L +++  
Sbjct: 5   KSNGYQASDATSSLDALRELYGNTFAVVKSMALKAAMDLGIADAIHHHGGAATLSQIVTR 64

Query: 64  LPLAANKRSCLPRLMRFLVSFGIFK------EDISREGTTTTTSVYQLTPVSRLLVDASS 117
           + L  +K  CL RLMR L   G+F        D +        +VY LTPVSRLL+ A +
Sbjct: 65  VALHPSKVPCLRRLMRVLTLSGVFAVQKLAPGDAAAPADEAEAAVYALTPVSRLLIGAGN 124

Query: 118 RG--------------IFVLGNWLTSSDEN-TPFGMAHGMDFWDFTGHDAEYSMLFNKGM 162
           +G               F + +WL         F   HG   W+    DA ++ + N GM
Sbjct: 125 QGHMMSMLLHPNFITPFFRISDWLQRELPGPCIFKHTHGRSLWEMADDDAAFNTVVNDGM 184

Query: 163 ASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGT 222
           ASDS F ++I++ E  EVF G+ SLVDV G NG  A+AIA AFP +KC V+DL HV+   
Sbjct: 185 ASDSIFTMDILVREHGEVFQGISSLVDVAGGNGTAAQAIARAFPEVKCSVMDLAHVVAEA 244

Query: 223 PTDGIVEFVAGDMMHFVPSADVVLLK 248
           P    VEF+ GDM   VP A+ V LK
Sbjct: 245 PGGTGVEFITGDMFESVPPANAVFLK 270
>Os01g0753300 
          Length = 378

 Score =  173 bits (438), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/283 (41%), Positives = 152/283 (53%), Gaps = 43/283 (15%)

Query: 1   MDQKQDEILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPEL 60
           MD  ++  L  D  ELL+AQAELW H F Y KS++LRCAVELGIP+A+HR GG+ ++PEL
Sbjct: 1   MDASRNSDLAAD--ELLRAQAELWNHIFAYTKSMSLRCAVELGIPDAVHRRGGAVTVPEL 58

Query: 61  LGTLPLAANKRSCLPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDA---SS 117
           +  L L  ++   L RLMR L   GIF      +        Y LT VSRLLV A   + 
Sbjct: 59  VAELALPRSREPFLRRLMRLLAHGGIF------DAAAGAEDAYGLTAVSRLLVSAPGGAG 112

Query: 118 RGI----------------FVLGNWL----------TSSDENTPFGMAH-GMDFWDFTGH 150
           +G+                  L +W            +     PF   H G + W     
Sbjct: 113 QGLSPFARAMLHPIIVSPSISLASWFRAAAADDDDEGADAPRVPFAAVHGGRELWAVAKD 172

Query: 151 DAEYSMLFNKGMASDSHFVVNIVI----HECAEVFVGVRSLVDVGGRNGAMAKAIADAFP 206
           D  +   FN  MA D  FV+++++    H  A++F G+ SLVDVGG +G  A+A A AFP
Sbjct: 173 DPGFGAAFNDAMACDGRFVMDVLLHGHHHGGAQLFRGITSLVDVGGGSGGAARASAAAFP 232

Query: 207 HIKCYVLDLPHVIHGTPT-DGIVEFVAGDMMHFVPSADVVLLK 248
           H++C VL+LP V+   P  DG VEFVAGDM   VP AD VLLK
Sbjct: 233 HVRCTVLELPQVVATVPPGDGGVEFVAGDMFDHVPKADAVLLK 275
>Os10g0118200 Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)
          Length = 366

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/271 (40%), Positives = 158/271 (58%), Gaps = 30/271 (11%)

Query: 3   QKQDE-ILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELL 61
           Q++DE ++  D  +L+QAQ +L+ H F ++KS AL  A++L I + IHRNGG+A+L +L 
Sbjct: 6   QEEDEQMMSTD--DLIQAQIKLYHHCFAFIKSTALWAAIDLRIADVIHRNGGAATLSDLA 63

Query: 62  GTLPLAANKRSCLPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRGI- 120
             + L   K S L RLMR L   GIF  +  R G     ++Y LT VSRLL+++   G  
Sbjct: 64  LNVGLHPTKLSHLRRLMRVLTVTGIFAVE-DRNGE----AMYTLTRVSRLLLNSDGEGTH 118

Query: 121 ------------------FVLGNWLTSSDENT--PFGMAHGMDFWDFTGHDAEYSMLFNK 160
                             F +  W T+    T  PF +AHG   W+   +DA+   +FN 
Sbjct: 119 ALSQMARVLANPLAVISHFSIHEWFTTEKATTMTPFEVAHGCTRWEMIANDAKDGSVFNA 178

Query: 161 GMASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIH 220
           GM  DS   ++I++ E   +F G+ SL+DVGG +GA A AIA AFP+IKC VLDLPH++ 
Sbjct: 179 GMVEDSRVAMDIILKESCGIFQGISSLIDVGGGHGAAAAAIATAFPNIKCTVLDLPHIVA 238

Query: 221 GTP-TDGIVEFVAGDMMHFVPSADVVLLKVL 250
             P T   ++F+ GD+  F+P+ADVVLLK L
Sbjct: 239 EAPATHSNIQFIGGDLFKFIPAADVVLLKCL 269
>Os11g0235500 Similar to Herbicide safener binding protein
          Length = 378

 Score =  169 bits (427), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/274 (42%), Positives = 150/274 (54%), Gaps = 43/274 (15%)

Query: 14  AELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGG---SASLPELLGTLPLAANK 70
           AELLQAQA+LW H+F YL ++ALRCA +LGIP AIHR GG   +ASLP+L+  L L A+K
Sbjct: 14  AELLQAQADLWRHSFSYLTAMALRCAAKLGIPTAIHRLGGEEAAASLPDLMAALSLPASK 73

Query: 71  RSCLPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVD---------------- 114
           +  + RLMR LV+ G+F  D            Y+LTP+SR+LVD                
Sbjct: 74  QPFVRRLMRLLVAVGVFAAD------GVADERYRLTPLSRILVDGVAAADDHHHDVLQTP 127

Query: 115 ----ASSR----GIFVLGNWLTSSDENTP------FGMAHGMDFWD---FTGHDAEYSML 157
               A+SR        +  WL       P      F  AHG   +D       D E++  
Sbjct: 128 FVLTATSRQYVEAALGVDEWLRKDAPPAPAPVPSPFEDAHGAPLFDEATAAAIDPEFAAA 187

Query: 158 FNKGMASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPH 217
            +  +A+     +  V+ EC ++  GV SL D  G +GA A+AIA AFPHIKC VLDLP 
Sbjct: 188 ADDALAAHDSLGIGAVLRECGDLLRGVASLTDCAGGDGATARAIAAAFPHIKCTVLDLPK 247

Query: 218 VIHGTPT-DGIVEFVAGDMMHFVPSADVVLLKVL 250
           VI   P  DG+V +VAGDM H VP A  VLLK++
Sbjct: 248 VIDKAPVDDGVVNYVAGDMFHAVPPAQAVLLKLV 281
>Os11g0306300 Similar to Herbicide safener binding protein
          Length = 346

 Score =  168 bits (426), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/263 (42%), Positives = 142/263 (53%), Gaps = 30/263 (11%)

Query: 15  ELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCL 74
           ELLQAQA LW H+  YL S+ALRCAV+LGIP  IHR GG+A+LP L+  L L   K   L
Sbjct: 19  ELLQAQANLWRHSLYYLTSMALRCAVKLGIPTVIHRLGGNATLPALITALSLPPAKLPFL 78

Query: 75  PRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDA-----------SSRGIFVL 123
            RLMR LVS G+F  +          +VY L P+S  LVD            +++  FVL
Sbjct: 79  RRLMRLLVSSGVFTTE-RGGAAAEAEAVYGLAPLSLFLVDGAFTGSEVDDGHTNQSAFVL 137

Query: 124 G--------------NWLTSSD---ENTPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDS 166
                          +W    +     +PF   HG      T  DAE + L ++ + S +
Sbjct: 138 AATSAHYVEAALGLDDWFMKDNVPAAASPFEAVHGAPLLHETPVDAELNRLVSEALVSQN 197

Query: 167 HFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTP-TD 225
           H  + + + E   VF G+ SLVD GG +GA A+AI  AFP IKC VLDLP VI   P  D
Sbjct: 198 HMGIGLALRESRRVFEGLESLVDCGGGDGAAARAIVRAFPGIKCTVLDLPQVIGTAPVAD 257

Query: 226 GIVEFVAGDMMHFVPSADVVLLK 248
           G V++VAGDM  ++P A  VLLK
Sbjct: 258 GAVDYVAGDMFSYIPPAQAVLLK 280
>Os09g0344500 Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)
          Length = 364

 Score =  165 bits (418), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/270 (40%), Positives = 154/270 (57%), Gaps = 30/270 (11%)

Query: 3   QKQDEILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLG 62
           Q+ ++++  +  +LLQAQ EL+ H   ++KS+ALR A +L IP+AIH NGG+A+L +L  
Sbjct: 6   QENEQVMSTE--DLLQAQIELYHHCLAFIKSMALRAATDLRIPDAIHCNGGAATLTDLAA 63

Query: 63  TLPLAANKRSCLPRLMRFLVSFGIFK-EDISREGTTTTTSVYQLTPVSRLLV-DASSR-- 118
            + L   K S L RLMR L   GIF   D   E T      Y LT VSRLL+ D   R  
Sbjct: 64  HVGLHPTKLSHLRRLMRVLTLSGIFTVHDGDGEAT------YTLTRVSRLLLSDGVERTH 117

Query: 119 ----------------GIFVLGNWLT--SSDENTPFGMAHGMDFWDFTGHDAEYSMLFNK 160
                             F L  W T   +   + F +AHG   W+   +D++   +FN 
Sbjct: 118 GLSQMVRVFVNPVAVASQFSLHEWFTVEKAAAVSLFEVAHGCTRWEMIANDSKDGSMFNA 177

Query: 161 GMASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIH 220
           GM  DS   ++I++ + + VF G+ SLVDVGG  GA+A A+  AFP IKC VLDLPH++ 
Sbjct: 178 GMVEDSSVAMDIILRKSSNVFRGINSLVDVGGGYGAVAAAVVRAFPDIKCTVLDLPHIVA 237

Query: 221 GTPTDGIVEFVAGDMMHFVPSADVVLLKVL 250
             P++  ++FV GD+  F+P+ADVVLLK +
Sbjct: 238 KAPSNNNIQFVGGDLFEFIPAADVVLLKCI 267
>Os06g0240800 Winged helix repressor DNA-binding domain containing protein
          Length = 344

 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 139/244 (56%), Gaps = 18/244 (7%)

Query: 15  ELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCL 74
           ++LQ   EL  H F YLKS ALRCA +LG+P+AIHR GG+A++ ++     +   K   L
Sbjct: 13  DMLQGHIELHHHLFSYLKSKALRCAADLGVPSAIHRRGGAATISDIAADTGVHPAKLPHL 72

Query: 75  PRLMRFLVSFGIFKED------ISREGTTTTTSVYQLTPVSRLLVDASSRGIFVLGNWLT 128
            R+MR L   GIF  +        ++G     + Y LTP SRLLV          G+  T
Sbjct: 73  RRIMRVLTVAGIFAANDEPSSSADQDGDAAGETAYTLTPPSRLLV----------GDRAT 122

Query: 129 SS-DENTPFGMAHG-MDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHECAEVFVGVRS 186
            + D    F  AHG +  W+ T  D  YS   N+  A D+ FV++I + E  +VF G+ S
Sbjct: 123 CNMDPMMRFLAAHGGVPAWEMTKRDNSYSRALNEACAGDTSFVMDIAVREGGDVFRGLSS 182

Query: 187 LVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIVEFVAGDMMHFVPSADVVL 246
           LVDVGG +GA A A+A AFPHIKC VLDLP  I   P DG V FVAG+M  ++P A+ V 
Sbjct: 183 LVDVGGGHGAAAMAVARAFPHIKCSVLDLPQAISEAPADGTVNFVAGNMFEYIPPANAVF 242

Query: 247 LKVL 250
           LK +
Sbjct: 243 LKYV 246
>Os11g0304050 Winged helix repressor DNA-binding domain containing protein
          Length = 369

 Score =  161 bits (407), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/268 (40%), Positives = 146/268 (54%), Gaps = 35/268 (13%)

Query: 15  ELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCL 74
           ELL AQA++  H+  ++ S+A +CAV+LGIP AIHR GG+ASLP+L+  L L   K   L
Sbjct: 9   ELLHAQADMLRHSLYFVTSMAFQCAVKLGIPTAIHRAGGTASLPDLVAALSLPPAKLPFL 68

Query: 75  PRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVD-------------------- 114
            RLMR LV+ G+F    + +  T    +Y+LTP+S LLV+                    
Sbjct: 69  RRLMRLLVNSGVFAA--ADDTATGWAGMYRLTPLSWLLVEGEGAAPVVDGHPSQVLVVLA 126

Query: 115 ASSR----GIFVLGNWL------TSSDENTPFGMAHGMDFWD--FTGHDAEYSMLFNKGM 162
           A+SR        L +W       +SS   +PF   HG   +D      D E   +FN+ +
Sbjct: 127 ATSRHFVEAAMGLADWFGKDLPPSSSAPPSPFEEVHGAALFDESMANLDPESDSMFNEAL 186

Query: 163 ASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGT 222
           A+  H     V+ EC EVF GV SL D  G +G  AKAI +AFPHIK  VLD P VI  T
Sbjct: 187 AAHDHSDFPTVLRECREVFQGVESLTDCRGGDGRAAKAIVEAFPHIKFTVLDFPRVIGET 246

Query: 223 PTDGIVEFVAGDMMHFVPSADVVLLKVL 250
            T G+V +VAGDM   +P A  V+L+++
Sbjct: 247 RT-GVVNYVAGDMFREIPPAQAVMLQLV 273
>Os07g0462800 
          Length = 356

 Score =  160 bits (405), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/256 (42%), Positives = 142/256 (55%), Gaps = 26/256 (10%)

Query: 16  LLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCLP 75
           LLQA  EL   + GY +S+AL CA +LG+ +AIHR GG A+L +L   L L   K   L 
Sbjct: 18  LLQASTELMNLSLGYARSMALGCAAKLGVADAIHRAGGRATLHDLHAALSLHPTKLPFLR 77

Query: 76  RLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLV---DASSRGIFVL--------- 123
           R+MR LV+ G+F +    E        Y+LTPVS LLV   D   R +  L         
Sbjct: 78  RVMRVLVASGVFAQ---VEEEEEEEDHYRLTPVSSLLVTAGDGRGRSLLPLVLFQLSPLC 134

Query: 124 -------GNWLTS-SDENTPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIH 175
                    WL S  +E T F M HG+  W       +    FN  MA+DS F++++ I+
Sbjct: 135 VTPATSMAEWLRSGGEEETAFEMVHGVGLWGACSRAPDLGEHFNDAMAADSRFIMDMAIN 194

Query: 176 ECA-EVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTD--GIVEFVA 232
               +VF  + S+VDV G  GA A+A+A AFPHIKC VLDLPHVI   P D   +V+FVA
Sbjct: 195 GSGRQVFDKITSMVDVAGGTGAAARAVAAAFPHIKCTVLDLPHVIDSIPADHGDVVQFVA 254

Query: 233 GDMMHFVPSADVVLLK 248
           GDMM F+P AD +LLK
Sbjct: 255 GDMMDFIPKADALLLK 270
>Os04g0196200 Winged helix repressor DNA-binding domain containing protein
          Length = 311

 Score =  158 bits (400), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/255 (41%), Positives = 134/255 (52%), Gaps = 30/255 (11%)

Query: 15  ELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCL 74
           ++LQ   +L  H +GY KS+AL CA +LGIP AIHR GG+A++ +++    +   K   L
Sbjct: 12  DMLQGHIDLHHHLYGYHKSMALLCATDLGIPGAIHRRGGAATISDIVADTMIPPAKLPHL 71

Query: 75  PRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRGIFV------------ 122
            RLMR L   GIF              VY+LTP SR+LV   +   F             
Sbjct: 72  RRLMRVLSVSGIF---------AVEEDVYKLTPASRILVGDKASCNFSPLVHLVVSPAML 122

Query: 123 -----LGNWLTSSDENTP---FGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVI 174
                L  W       +P   F MAHGM  W+    D   +   N    +DS F++ I +
Sbjct: 123 TTFSSLSPWFRDGRNASPTALFEMAHGMPPWEMMKRDDTMNSALNDACVADSSFLMEIAL 182

Query: 175 HECAEV-FVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIVEFVAG 233
            E  +V F G+RSLVDVGG +G  A AIA AFP IKC VLDLPHVI   P DG V F+AG
Sbjct: 183 RERGDVVFRGLRSLVDVGGGHGGAAMAIAKAFPDIKCSVLDLPHVISQAPDDGTVCFIAG 242

Query: 234 DMMHFVPSADVVLLK 248
           DM   +P AD VLLK
Sbjct: 243 DMFEDIPPADAVLLK 257
>Os06g0281300 Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)
          Length = 347

 Score =  158 bits (399), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/249 (43%), Positives = 136/249 (54%), Gaps = 35/249 (14%)

Query: 34  IALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCLPRLMRFLVSFGIFKEDISR 93
           +AL+CA ELGIP AIHR GG+A+L +++  + L   K   L RLMR L   GIF     +
Sbjct: 1   MALKCAAELGIPAAIHRRGGAATLRDIVADVALRQAKVPHLRRLMRVLTVSGIFAMK-QQ 59

Query: 94  EGTTTTTSVYQLTPVSRLLVDASSRG------------------IFVLGNWLTSSDEN-- 133
           +  ++  +VY LTP SRLLV  +  G                   F L  W    DE   
Sbjct: 60  QPASSGEAVYTLTPASRLLVAGAGGGHDMSPMLRFLVHPTALTPFFSLHAWFRVDDEEEE 119

Query: 134 ------------TPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHECA-EV 180
                       + F MAHG   W+ TG DA Y  + N  MA+DS FV+ +V  E   +V
Sbjct: 120 EEPVAAGGGAAMSLFEMAHGFPRWEMTGRDAAYGAVLNDAMAADSRFVMEVVFREGGGDV 179

Query: 181 FVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTD-GIVEFVAGDMMHFV 239
           F G+ SLVDVGG +GA A A+A AFPH+KC VLDLP V+   P D G V FVAGDM  +V
Sbjct: 180 FRGIGSLVDVGGGHGAAAAAVAAAFPHVKCSVLDLPQVVRKAPPDAGDVRFVAGDMFEYV 239

Query: 240 PSADVVLLK 248
           P AD VLLK
Sbjct: 240 PPADAVLLK 248
>Os11g0303300 Winged helix repressor DNA-binding domain containing protein
          Length = 293

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/241 (40%), Positives = 127/241 (52%), Gaps = 38/241 (15%)

Query: 2   DQKQDEILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELL 61
           DQ    ++  D  E+LQ QAELW HT  YL S+ LRCAV LGIP AIHR+GG+ASLP+L+
Sbjct: 5   DQAPSMLVPTDD-EMLQTQAELWRHTLSYLTSMTLRCAVHLGIPTAIHRHGGAASLPDLV 63

Query: 62  GTLPLAANKRSCLPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRGIF 121
             L L   K   L RLMR LV  GIF  D +  GTT     Y+LTPVS  LVD ++  + 
Sbjct: 64  TALSLPTAKLPFLRRLMRLLVHSGIFASDDA--GTT-----YRLTPVSFFLVDGAAAAVP 116

Query: 122 VLGNWLTSSDE----------NTPFGMA-------------------HGMDFWDFTGH-D 151
           V+   L+              +T  G+A                   HG+   + T    
Sbjct: 117 VVDGHLSQVPHVLASTSRHCLDTVAGLAGWFREDFPAPSPPSPFEHVHGVTPLESTARLG 176

Query: 152 AEYSMLFNKGMASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCY 211
            E + LF +G+         +V+ EC +VF GV SL D GG +G  A+AIA+AFPH+KC+
Sbjct: 177 PEDAALFQEGLRVYDASGFAVVLRECRDVFDGVESLTDCGGGDGTAARAIAEAFPHVKCW 236

Query: 212 V 212
            
Sbjct: 237 T 237
>Os11g0539500 Winged helix repressor DNA-binding domain containing protein
          Length = 375

 Score =  141 bits (355), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/274 (37%), Positives = 146/274 (53%), Gaps = 36/274 (13%)

Query: 5   QDEILKKDRAELLQAQAELWCHTFGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTL 64
            +E++  +  +++ A A L+ H F Y+K +AL+CAVELGIP+AIHR GG+A+L  +    
Sbjct: 7   SEEVISHEE-DMVGAFALLYHHVFSYIKPMALKCAVELGIPDAIHRRGGAATLANIAADT 65

Query: 65  PLAANKRSCLPRLMRFLVSFGIFKEDISR------EGTTTTTSVYQLTPVSRLLVDASSR 118
            + A++ + L  LM+ L + G+F    +       E    T+++Y LT  S L+V    R
Sbjct: 66  GVHASRLTDLRCLMKLLTTSGMFAATAATTDGGEGEPAVATSTMYTLTAASGLVV--GPR 123

Query: 119 GI----------------FVLGNWL------TSSDENTPFGMAHGMDFWDFTGHDAEYSM 156
           G+                F +  WL            + F +AHG   WD    D +   
Sbjct: 124 GLSTVVRFAAGPVAVSPFFDMHAWLRAAPAAAPPAARSLFELAHGRSRWDAANADND--- 180

Query: 157 LFNKGMASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLP 216
             N     +S  ++  V+ + A VF G+RSLVDVGG +GA+AKAIA AFP IKC V+DLP
Sbjct: 181 TMNAHSFVESQLLIEAVLRDHAGVFRGLRSLVDVGGGHGAVAKAIAAAFPDIKCTVMDLP 240

Query: 217 HVIHGTPT--DGIVEFVAGDMMHFVPSADVVLLK 248
           HV+   P   DG +  VAGDM   +P AD VLLK
Sbjct: 241 HVVADAPVSDDGNLHLVAGDMFQSIPPADAVLLK 274
>Os12g0445200 Winged helix repressor DNA-binding domain containing protein
          Length = 335

 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 124/236 (52%), Gaps = 27/236 (11%)

Query: 40  VELGIPNAIHRNGGSASLPELLGTL-PLAANKRSCLPRLMRFLVSFGIFKEDISR--EGT 96
           ++LGI +AIH +GG+A+L +++  +  L  +K  CL RLMR L   G+F  + +   +G 
Sbjct: 1   MDLGIADAIHHHGGAATLSQIVTRVTSLHPSKIPCLRRLMRVLTLTGVFAVETTEPVDGA 60

Query: 97  TT---TTSVYQLTPVSRLLVDASSR------------------GIFVLGNWLTSSDENTP 135
                  +VY LTP SRLL+  S                        + +WL        
Sbjct: 61  AADELPAAVYALTPASRLLLVGSGNHHQQASLMSMLLHPSFIASFLRISDWLQRELPGPC 120

Query: 136 -FGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHECAEVFVGVRSLVDVGGRN 194
            F   HG   W+    DA ++ + N  M SDS  V+++V+ E  EV  G+ SLVDV G +
Sbjct: 121 IFEHTHGRSMWEMADDDAAFNKVVNNRMVSDSRLVMDVVVREHGEVSRGISSLVDVAGGH 180

Query: 195 GAMAKAIADAFPHIKCYVLDLPHVIHGTPTDG--IVEFVAGDMMHFVPSADVVLLK 248
           G  A+AIA+AFP ++C VLDLPHV+ G P      VE+VAGDM   VP A+ V LK
Sbjct: 181 GTAARAIAEAFPEVRCTVLDLPHVVAGAPVGAGPGVEYVAGDMFESVPPANAVFLK 236
>Os10g0118000 Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)
          Length = 263

 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 82/131 (62%), Gaps = 3/131 (2%)

Query: 123 LGNWLT--SSDENTPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHECAEV 180
           +  W T   +   TPF +AHG   W+   +DA+   +FN  M  DS   ++I++ E   V
Sbjct: 36  IHEWFTIEQAAAMTPFEVAHGCTRWEIIANDAKDGSVFNTAMVEDSRVAMDIILKESCGV 95

Query: 181 FVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTD-GIVEFVAGDMMHFV 239
           F G+ SLVDVGG +GA A AIA AFP+IKC VLDLPH++   PT    ++FV GD   F+
Sbjct: 96  FQGISSLVDVGGGHGAAAAAIATAFPNIKCTVLDLPHIVAEAPTTHSNIQFVGGDFFEFI 155

Query: 240 PSADVVLLKVL 250
           P+ADVVLLK +
Sbjct: 156 PAADVVLLKYI 166
>Os04g0175900 Winged helix repressor DNA-binding domain containing protein
          Length = 371

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 110/252 (43%), Gaps = 26/252 (10%)

Query: 24  WCHTF----GYLKSIALRCAVELGIPNAI--HRNGGSASLPELLGTLPLA--ANKRSCLP 75
           W H      G+  S+ L+ A++LG+ +A+    +G + +  EL+  LP    A   + + 
Sbjct: 25  WLHALELISGFTVSMTLKAAIQLGLIDALTAAADGRALTAGELVAQLPAVDDAEAATSVD 84

Query: 76  RLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRGIFVLGNWLTSSDEN-- 133
           R++R L SF + +              Y   PV R      +    +    +   DE+  
Sbjct: 85  RMLRLLASFNVVRCSTEAGPGGDPLRRYSPAPVCRWFTAGDNHQGSLAPRLMLDVDEDNL 144

Query: 134 ---------------TPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHECA 178
                          + F  AHGM  +++ G +  ++MLFN+ M+  S  V+N ++    
Sbjct: 145 STWHQMAAAVVSGGPSAFERAHGMPLFEYMGTNHRFNMLFNQAMSQQSMMVMNKLLDRF- 203

Query: 179 EVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIVEFVAGDMMHF 238
             F G+  LVDVGG  G   K I   + HI     DLPHVI   P+   V  VAG+M   
Sbjct: 204 HGFDGISVLVDVGGGTGVTLKMIISRYKHITGVNFDLPHVISQAPSLPGVNHVAGNMFES 263

Query: 239 VPSADVVLLKVL 250
           VP  D + LK +
Sbjct: 264 VPKGDAIFLKSM 275
>Os12g0202700 Winged helix repressor DNA-binding domain containing protein
          Length = 250

 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 20/216 (9%)

Query: 28  FGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRS---CLPRLMRFLVSF 84
           F Y +S+ LR AV+LG+ +A+    G+A   + L     A +K      + R++R+L SF
Sbjct: 26  FAYNRSMVLRAAVQLGLLDALSAAAGNALTADELAEKIQATDKAEVAVSVDRILRYLASF 85

Query: 85  GIFKEDISREGTTTTTSVYQLTPVSRLLVDASSRG------IFVLGN-----W-----LT 128
            + +              Y   PV R L   +  G      +FV+       W       
Sbjct: 86  DVVRCSTETSPDGALLRRYMPAPVCRWLTRNNGEGSLAPFTVFVVDEDHLLPWQHIAAAV 145

Query: 129 SSDENTPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHECAEVFVGVRSLV 188
           +S    PF  AHG+ ++++ G +     LF+  MA  S  +V+ ++ E  + F GV+ LV
Sbjct: 146 TSGGPAPFERAHGLLYFEYMGKNQRLGALFDHAMAQHSVILVSKML-ERFQGFDGVQQLV 204

Query: 189 DVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGTPT 224
           DVGG +G+    I   + HI+    DLPHVI   P+
Sbjct: 205 DVGGGDGSTLGMITSRYKHIRGINYDLPHVISQAPS 240
>Os04g0104900 Similar to 0-methyltransferase (EC 2.1.1.6) (Fragment)
          Length = 354

 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 15/237 (6%)

Query: 28  FGYLKSIALRCAVELGIPNAIHRNGGSASLPELLGTLPLAANKRSCLPRLMRFLVSFGIF 87
           F ++  + L+  ++LG+ +A+   G + +  EL     L A   S + R++R L S  + 
Sbjct: 22  FTFVVPMTLKATIKLGLLDALTGGGHALTADELAAAAQLPAEAASSVDRMLRLLASLDVV 81

Query: 88  KEDISREGTTTTTSVYQLTPVSRLLVDASSRGIFV--------LGNW------LTSSDEN 133
           K   +  G       Y   PV R      S             L  W      +   D  
Sbjct: 82  KCAPTDTGGEAAVRRYTPAPVCRWFAGERSLAPLAMFLLDDDYLSTWNQLPAAVAGGDGQ 141

Query: 134 TPFGMAHGMDFWDFTGHDAEYSMLFNKGMASDSHFVVNIVIHECAEVFVGVRSLVDVGGR 193
             F  A GM  +++ G +   + LFN+ M   S  V+  ++ E  + F GV  LVDVGG 
Sbjct: 142 VAFEKARGMPMFEYMGTNRRLNTLFNQAMVQQSTVVIGKLL-ERFQGFDGVSVLVDVGGG 200

Query: 194 NGAMAKAIADAFPHIKCYVLDLPHVIHGTPTDGIVEFVAGDMMHFVPSADVVLLKVL 250
            GA  + I   + +I     DLPHVI   P+   V+ +AG+M   VP+ D + LK +
Sbjct: 201 TGATLEMITSRYKNITGVNFDLPHVIAQAPSLPGVKHIAGNMFESVPNGDAIFLKSM 257
>Os12g0240900 Similar to Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)
           (S-adenosysl-L- methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 375

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 101/245 (41%), Gaps = 26/245 (10%)

Query: 29  GYLKSIALRCAVELGIPNAIHRNGGSASLPELLGT---LPLAANKRSCLPRLMRFLVSFG 85
           G + S+ L+ A+ELG+ + +    G+A   E L     LP A    + + R++R L S+G
Sbjct: 33  GSVVSMTLKAAIELGLVDELLAAAGAAVTAEELAARLRLPAAVAAAAAVDRMLRLLASYG 92

Query: 86  IFKEDISREGTTTTTSVYQLTPVSRLLVDASSRG--------------IFVLGNWL---- 127
           + +              Y   PV + L   SS G              +F + NW     
Sbjct: 93  VVRCATEAGPDGKARRSYAAAPVCKWLAAGSSSGEGSMAPLGLLNLDKVF-MENWYYLKE 151

Query: 128 TSSDENTPFGMAHGMDFWDFTGHDAE--YSMLFNKGMASDSHFVVNIVIHECAEVFVGVR 185
             S+  T F  A+G   + + G D     + LFN+ MAS S  + N ++        G  
Sbjct: 152 AVSEGGTAFDKAYGTSLFQYLGQDGNEPSNTLFNQAMASHSVVITNKLLQFFRGFDAGAG 211

Query: 186 SLVDVGGRNGAMA--KAIADAFPHIKCYVLDLPHVIHGTPTDGIVEFVAGDMMHFVPSAD 243
             V V    G  A  + I    PH++    DLPHVI   P    VE + G M   VPS  
Sbjct: 212 VDVLVDVGGGVGATLRMITARHPHLRGVNYDLPHVIAQAPPVEGVEHIGGSMFDHVPSGS 271

Query: 244 VVLLK 248
            +LLK
Sbjct: 272 AILLK 276
>Os08g0157500 Similar to Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)
           (S-adenosysl-L- methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 368

 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 19/208 (9%)

Query: 59  ELLGTLPLAANKRSC--LPRLMRFLVSFGIFKEDISREGTTTTTSVYQLTPVSRLLV--- 113
           E+   LP  AN  +   + R++R L S+ + + ++        +  Y   PV + L    
Sbjct: 64  EVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNE 123

Query: 114 DASSRGIFVLGN--------WLTSSDE----NTPFGMAHGMDFWDFTGHDAEYSMLFNKG 161
           D  S     L N        W    D       PF  A+GM  +++ G DA ++ +FN+G
Sbjct: 124 DGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEG 183

Query: 162 MASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHG 221
           M + S  +   ++ +    F    ++VDVGG  GA   A+    PHI+    DLPHVI  
Sbjct: 184 MKNHSVIITKKLL-DLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISE 242

Query: 222 TPTDGIVEFVAGDMMHFVP-SADVVLLK 248
            P    VE V GDM   VP   D +L+K
Sbjct: 243 APPFPGVEHVGGDMFASVPRGGDAILMK 270
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.138    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,676,816
Number of extensions: 358649
Number of successful extensions: 856
Number of sequences better than 1.0e-10: 33
Number of HSP's gapped: 783
Number of HSP's successfully gapped: 33
Length of query: 250
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 152
Effective length of database: 11,918,829
Effective search space: 1811662008
Effective search space used: 1811662008
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 155 (64.3 bits)