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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0303600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Herbicide safener binding protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.07 (0.0273) R2 : 0.434
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.07 (0.0574) R2dN8 : 0.56 R2N8 : 0.434
σ : 0.514
deviance : 121.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
113.47 0.5 3.08 0.152 0.573 -0.625 0.447 -0.444 1.05 1.1 0.78 114 -- --
113.59 0.496 3.08 0.128 0.542 -0.602 -0.0493 -- 1.05 0.99 0.7251 113 -- --
113.55 0.496 3.08 0.129 0.56 -0.616 -- -0.0879 1.05 1.06 0.72 115 -- --
113.6 0.496 3.08 0.128 0.56 -0.617 -- -- 1.04 1.04 0.72 115 -- --
116.19 0.502 3.07 0.161 -- -0.203 -- -0.0842 1.08 -- 0.756 107 -- --
118.51 0.51 3.06 0.166 0.169 -- 0.129 -- 1.09 11.8 -- -- -- --
118.58 0.51 3.06 0.171 0.168 -- -- -- 1.09 11.8 -- -- -- --
116.23 0.502 3.07 0.161 -- -0.205 -- -- 1.08 -- 0.7199 108 -- --
114.02 0.497 3.08 -- 0.576 -0.63 -- -- 1.03 1.05 0.6902 115 -- --
120.37 0.513 3.06 0.166 -- -- -- -- 1.09 -- -- -- -- --
119.35 0.511 3.06 -- 0.166 -- -- -- 1.07 11.8 -- -- -- --
116.91 0.504 3.07 -- -- -0.205 -- -- 1.06 -- 0.6599 108 -- --
121.09 0.514 3.07 -- -- -- -- -- 1.07 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 97.43 radiation 10.0 10 < th dose independent rect. 9 1
5 97.65 radiation 10.0 10 < th dose dependent rect. 10 1
11 99.19 wind 1.0 30 < th dose independent rect. 9 1
12 99.58 wind 1.0 10 < th dose dependent rect. 9 1
54 108.38 radiation 10.0 10 < th dose independent rect. 6 5
55 108.54 temperature 25.0 270 > th dose independent rect. 1 1
58 109.10 temperature 25.0 90 > th dose independent rect. 1 4
59 109.18 temperature 20.0 90 > th dose dependent rect. 19 10
64 109.37 temperature 25.0 270 > th dose dependent rect. 1 1
68 109.43 humidity 80.0 10 > th dose dependent rect. 10 1
73 109.55 temperature 25.0 90 > th dose dependent rect. 1 4
79 109.74 temperature 10.0 90 > th dose dependent rect. 19 10
89 110.11 radiation 10.0 10 < th dose independent rect. 6 20
92 110.18 temperature 20.0 10 > th dose dependent rect. 2 3
111 110.83 temperature 25.0 270 > th dose independent rect. 19 10
113 110.86 temperature 25.0 270 > th dose independent sin 10 NA
130 111.14 radiation 20.0 10 < th dose dependent rect. 6 5
135 111.21 temperature 20.0 10 > th dose dependent rect. 22 8
136 111.23 radiation 10.0 10 < th dose independent rect. 9 17
139 111.28 radiation 10.0 10 < th dose independent rect. 6 13
140 111.30 temperature 25.0 270 > th dose independent rect. 22 7
146 111.38 radiation 1.0 90 < th dose independent rect. 19 13
185 111.63 wind 3.0 30 < th dose dependent rect. 2 1
186 111.63 temperature 20.0 10 > th dose dependent rect. 2 1
188 111.64 temperature 25.0 270 < th dose independent sin 11 NA
192 111.67 humidity 80.0 30 > th dose independent rect. 2 1
200 111.69 wind 3.0 30 < th dose independent rect. 2 1
202 111.70 humidity 50.0 30 > th dose dependent rect. 2 1
209 111.72 wind 9.0 30 < th dose independent rect. 2 1
210 111.72 temperature 10.0 30 > th dose independent rect. 2 1
212 111.72 temperature 30.0 30 < th dose independent rect. 2 1
213 111.72 humidity 50.0 30 > th dose independent rect. 2 1
216 111.72 atmosphere 995.0 30 > th dose independent rect. 2 1
217 111.72 atmosphere 1010.0 30 < th dose independent rect. 2 1
219 111.72 radiation 1.0 30 < th dose independent rect. 2 1
224 111.72 precipitation 0.1 30 < th dose independent rect. 2 1
225 111.72 temperature 10.0 30 > th dose independent rect. 3 23
226 111.72 radiation 1.0 30 < th dose dependent rect. 2 1
231 111.72 precipitation 0.1 30 < th dose dependent rect. 2 1
238 111.73 wind 3.0 10 < th dose independent rect. 6 4
241 111.73 atmosphere 1015.0 30 < th dose dependent rect. 2 1
242 111.75 atmosphere 1005.0 30 > th dose independent rect. 2 1
244 111.75 atmosphere 1005.0 30 > th dose dependent rect. 2 1
245 111.76 atmosphere 995.0 30 > th dose dependent rect. 2 1
248 111.76 radiation 1.0 90 < th dose dependent rect. 19 13
266 111.83 radiation 1.0 90 < th dose independent rect. 19 22
280 111.92 radiation 30.0 10 < th dose dependent rect. 6 20
286 111.98 precipitation 0.1 90 < th dose independent rect. 5 14
289 111.98 precipitation 0.1 90 < th dose dependent rect. 5 14
292 112.01 temperature 30.0 30 < th dose dependent rect. 2 1
293 112.01 radiation 40.0 10 < th dose dependent rect. 6 13
296 112.03 humidity 70.0 10 > th dose dependent rect. 8 3
310 112.11 wind 5.0 10 < th dose dependent rect. 6 4
313 112.13 temperature 25.0 270 > th dose independent rect. 19 15
322 112.19 wind 1.0 90 > th dose independent rect. 5 14
333 112.22 radiation 1.0 90 < th dose dependent rect. 19 22
341 112.26 wind 1.0 30 > th dose independent rect. 2 1
350 112.30 wind 9.0 90 < th dose independent rect. 5 14
354 112.31 wind 9.0 90 < th dose independent rect. 19 10
355 112.31 temperature 10.0 90 > th dose independent rect. 19 10
356 112.31 temperature 30.0 90 < th dose independent rect. 19 10
357 112.31 humidity 50.0 90 > th dose independent rect. 19 10
359 112.31 atmosphere 995.0 90 > th dose independent rect. 19 10
360 112.31 radiation 20.0 90 < th dose independent rect. 19 10
363 112.31 temperature 10.0 90 > th dose independent rect. 5 14
364 112.31 atmosphere 1015.0 90 < th dose independent rect. 5 14
368 112.32 radiation 30.0 90 < th dose dependent rect. 19 10
386 112.33 radiation 1.0 90 > th dose independent rect. 16 19
405 112.37 atmosphere 1010.0 90 < th dose independent rect. 19 10
436 112.49 humidity 80.0 10 > th dose independent rect. 10 1
438 112.49 radiation 1.0 720 < th dose independent rect. 1 4
443 112.50 humidity 80.0 30 > th dose independent rect. 6 5
446 112.50 precipitation 0.1 90 < th dose independent rect. 19 10
449 112.50 radiation 10.0 720 < th dose dependent rect. 1 4
451 112.50 precipitation 0.1 90 < th dose dependent rect. 19 10
462 112.52 humidity 50.0 10 > th dose dependent rect. 6 5
463 112.53 wind 9.0 720 < th dose independent rect. 1 4
464 112.53 temperature 10.0 720 > th dose independent rect. 1 4
465 112.53 temperature 30.0 720 < th dose independent rect. 1 4
466 112.53 humidity 50.0 720 > th dose independent rect. 1 4
469 112.53 atmosphere 995.0 720 > th dose independent rect. 1 4
474 112.53 temperature 10.0 720 > th dose independent rect. 5 20
477 112.54 temperature 20.0 10 > th dose independent rect. 20 10
489 112.58 wind 1.0 270 > th dose independent rect. 5 2
490 112.58 temperature 25.0 270 < th dose independent rect. 19 12
491 112.58 precipitation 0.1 10 < th dose independent rect. 6 13
492 112.58 precipitation 0.1 10 < th dose dependent rect. 6 13
493 112.59 temperature 25.0 10 > th dose independent rect. 6 4
494 112.59 temperature 10.0 720 > th dose independent rect. 13 4
495 112.59 atmosphere 1015.0 720 < th dose independent rect. 13 4
496 112.59 precipitation 0.1 720 < th dose independent rect. 13 4
497 112.59 temperature 10.0 720 > th dose independent rect. 17 20
498 112.59 precipitation 0.1 720 < th dose dependent rect. 13 4
509 112.63 wind 9.0 10 < th dose independent rect. 6 13
514 112.66 wind 9.0 720 < th dose independent rect. 13 4
527 112.69 wind 9.0 10 < th dose independent rect. 19 11
532 112.70 temperature 10.0 10 > th dose independent rect. 19 11
533 112.70 temperature 30.0 10 < th dose independent rect. 19 11
534 112.70 humidity 50.0 10 > th dose independent rect. 19 11
536 112.70 atmosphere 995.0 10 > th dose independent rect. 19 11
537 112.70 radiation 20.0 10 < th dose independent rect. 19 11
540 112.70 temperature 10.0 10 > th dose independent rect. 6 13
542 112.70 atmosphere 1015.0 10 < th dose independent rect. 6 13
548 112.71 wind 9.0 30 < th dose dependent rect. 19 11
595 112.82 temperature 25.0 270 > th dose independent rect. 17 20
605 112.86 atmosphere 1015.0 720 < th dose independent rect. 1 4
607 112.86 radiation 10.0 720 < th dose independent rect. 17 12
615 112.89 radiation 10.0 10 < th dose independent rect. 9 10
626 112.91 temperature 10.0 720 > th dose independent rect. 5 12
627 112.91 temperature 10.0 720 > th dose independent rect. 17 12
629 112.91 atmosphere 1015.0 720 < th dose independent rect. 5 12
630 112.91 radiation 30.0 720 < th dose independent rect. 17 12
638 112.93 temperature 25.0 720 > th dose independent rect. 17 2
645 112.94 temperature 30.0 10 < th dose independent rect. 6 13
656 112.96 radiation 40.0 720 < th dose dependent rect. 17 12
662 112.98 wind 9.0 720 < th dose independent rect. 17 12
666 113.00 radiation 1.0 90 > th dose independent sin 10 NA
669 113.00 wind 9.0 720 < th dose independent rect. 17 20
672 113.01 radiation 1.0 90 < th dose independent sin 11 NA
699 113.06 atmosphere 995.0 90 > th dose independent rect. 5 14
706 113.07 wind 9.0 720 < th dose independent rect. 5 20
714 113.08 radiation 40.0 30 < th dose independent rect. 6 13
724 113.10 temperature 30.0 720 < th dose independent rect. 5 4
725 113.10 wind 9.0 720 < th dose independent rect. 5 12
727 113.10 wind 1.0 10 > th dose independent rect. 5 23
728 113.10 temperature 25.0 720 > th dose dependent rect. 22 1
735 113.12 humidity 50.0 720 > th dose independent rect. 17 12
736 113.12 humidity 50.0 10 > th dose independent rect. 6 13
737 113.12 humidity 70.0 10 > th dose independent rect. 6 13
739 113.12 humidity 50.0 720 > th dose independent rect. 17 20
742 113.13 humidity 50.0 90 > th dose independent rect. 5 14
744 113.13 temperature 20.0 270 > th dose dependent rect. 22 5
746 113.13 radiation 20.0 10 < th dose dependent rect. 8 18
754 113.15 humidity 50.0 10 > th dose dependent rect. 19 11
759 113.17 radiation 40.0 720 < th dose independent rect. 5 4
767 113.19 humidity 90.0 10 < th dose independent rect. 6 4
771 113.20 wind 1.0 30 < th dose independent rect. 17 1
786 113.20 wind 1.0 30 < th dose dependent rect. 17 1
788 113.20 humidity 70.0 30 < th dose dependent rect. 17 1
801 113.21 wind 9.0 270 < th dose independent rect. 13 12
806 113.22 temperature 10.0 270 > th dose independent rect. 1 12
807 113.22 temperature 10.0 270 > th dose independent rect. 13 12
808 113.22 atmosphere 995.0 270 > th dose independent rect. 1 12
809 113.22 atmosphere 1015.0 270 < th dose independent rect. 1 12
830 113.26 atmosphere 995.0 30 > th dose independent rect. 3 23
835 113.28 wind 7.0 720 < th dose independent rect. 5 4
838 113.28 humidity 90.0 30 < th dose independent rect. 6 13
840 113.28 atmosphere 995.0 720 > th dose independent rect. 17 20
841 113.28 temperature 25.0 720 > th dose dependent sin 11 NA
853 113.30 temperature 25.0 1440 > th dose dependent rect. 21 5
856 113.31 wind 9.0 270 < th dose independent rect. 1 12
866 113.32 radiation 10.0 90 < th dose dependent sin 11 NA
869 113.33 temperature 25.0 30 > th dose independent rect. 4 1
872 113.33 precipitation 0.1 720 < th dose independent rect. 1 4
873 113.33 atmosphere 995.0 270 > th dose dependent rect. 6 1
875 113.33 precipitation 0.1 720 < th dose dependent rect. 1 4
881 113.34 atmosphere 995.0 10 > th dose dependent rect. 6 4
887 113.35 temperature 25.0 720 < th dose independent rect. 17 8
894 113.36 humidity 70.0 30 < th dose independent rect. 17 1
913 113.37 temperature 10.0 1440 > th dose independent rect. 20 11
916 113.37 temperature 30.0 1440 < th dose independent rect. 20 11
920 113.37 humidity 50.0 1440 > th dose independent rect. 20 11
925 113.37 atmosphere 995.0 1440 > th dose independent rect. 20 11
926 113.37 radiation 40.0 1440 < th dose independent rect. 20 11
930 113.37 temperature 10.0 1440 > th dose independent rect. 7 13
938 113.38 temperature 20.0 270 > th dose independent rect. 6 1
939 113.38 humidity 60.0 720 > th dose independent rect. 5 4
959 113.39 wind 1.0 720 > th dose independent rect. 13 4
967 113.39 wind 9.0 30 < th dose independent rect. 3 23
969 113.39 humidity 50.0 720 > th dose dependent rect. 1 4
977 113.40 temperature 10.0 720 > th dose independent rect. 5 4
980 113.40 atmosphere 995.0 720 > th dose independent rect. 5 4
981 113.40 atmosphere 1015.0 720 < th dose independent rect. 5 4
989 113.40 temperature 10.0 720 > th dose independent rect. 9 20
993 113.41 atmosphere 1005.0 270 > th dose independent rect. 6 1