Os12g0240900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L- methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT).
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Os12g0240900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L- methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 454.53 | 1 | 8.49 | 2.32 | 2.08 | -3.26 | 0.731 | -7.16 | 0.607 | 10.6 | 3.815 | 336 | -- | -- |
| 489.22 | 1.03 | 8.36 | 3.42 | 2.01 | -3.35 | 0.723 | -- | 0.896 | 10.3 | -2.391 | 384 | -- | -- |
| 456.25 | 0.995 | 8.49 | 2.34 | 2.02 | -3.25 | -- | -7.11 | 0.609 | 10.5 | 3.294 | 367 | -- | -- |
| 477.03 | 1.02 | 8.38 | 3.36 | 1.98 | -2.72 | -- | -- | 0.897 | 10.5 | 20.6 | 382 | -- | -- |
| 610.3 | 1.15 | 8.5 | 2.7 | -- | -4.47 | -- | -6.38 | 0.819 | -- | 1.167 | 651 | -- | -- |
| 611.01 | 1.16 | 8.45 | 2.68 | 2.48 | -- | 1.45 | -- | 0.416 | 8.94 | -- | -- | -- | -- |
| 618.16 | 1.16 | 8.45 | 2.73 | 2.47 | -- | -- | -- | 0.418 | 9 | -- | -- | -- | -- |
| 619.96 | 1.16 | 8.38 | 3.6 | -- | -3.73 | -- | -- | 1.07 | -- | 20.39 | 662 | -- | -- |
| 752.36 | 1.28 | 8.47 | -- | 2.11 | -1.79 | -- | -- | 0.362 | 10 | 22.18 | 346 | -- | -- |
| 968.63 | 1.45 | 8.51 | 2.73 | -- | -- | -- | -- | 0.433 | -- | -- | -- | -- | -- |
| 815.01 | 1.34 | 8.51 | -- | 2.47 | -- | -- | -- | 0.113 | 8.92 | -- | -- | -- | -- |
| 941.23 | 1.43 | 8.53 | -- | -- | -2.75 | -- | -- | 0.349 | -- | 24.2 | 610 | -- | -- |
| 1165.2 | 1.59 | 8.58 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 445.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 2 | 446.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 3 | 446.49 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 10 | 447.38 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 24 | 450.23 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 25 | 450.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 35 | 451.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 55 | 452.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 70 | 454.04 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 96 | 455.63 | temperature | 15 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 103 | 455.93 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 152 | 458.22 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 270 | 462.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 294 | 463.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 296 | 463.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 310 | 464.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 313 | 464.17 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 328 | 464.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 7 |
| 331 | 464.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 346 | 464.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 354 | 465.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 355 | 465.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 369 | 465.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 390 | 465.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 397 | 465.89 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 410 | 466.15 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 420 | 466.25 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 459 | 466.87 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 465 | 466.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 505 | 467.64 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 668 | 469.66 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 699 | 469.95 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 773 | 470.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 877 | 471.37 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 21 |