Os11g0235500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Herbicide safener binding protein.
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Os11g0235500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Herbicide safener binding protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.35 | 0.411 | 2.84 | -0.0905 | 0.0142 | 1.08 | -0.171 | -2.98 | 0.0131 | 22.6 | 10.1 | 65 | -- | -- |
| 76.46 | 0.407 | 2.85 | -0.0864 | 0.00754 | 1.83 | -0.165 | -- | 0.0081 | 22.9 | 10.1 | 64 | -- | -- |
| 76.46 | 0.407 | 2.84 | -0.084 | 0.0134 | 1.17 | -- | -2.56 | 0.0123 | 22.1 | 10.11 | 64 | -- | -- |
| 76.54 | 0.407 | 2.85 | -0.0725 | 0.0115 | 1.82 | -- | -- | 0.0113 | 22.7 | 10.1 | 64 | -- | -- |
| 76.47 | 0.407 | 2.84 | -0.0832 | -- | 1.18 | -- | -2.55 | 0.0126 | -- | 10.12 | 64 | -- | -- |
| 81.57 | 0.423 | 2.85 | -0.144 | 0.0353 | -- | -0.216 | -- | -0.0115 | 17.9 | -- | -- | -- | -- |
| 81.67 | 0.423 | 2.85 | -0.142 | 0.0358 | -- | -- | -- | -0.0122 | 16.7 | -- | -- | -- | -- |
| 76.55 | 0.407 | 2.85 | -0.0722 | -- | 1.82 | -- | -- | 0.0115 | -- | 10.1 | 64 | -- | -- |
| 76.68 | 0.408 | 2.85 | -- | 0.0112 | 1.86 | -- | -- | 0.0197 | 22.5 | 10.1 | 64 | -- | -- |
| 81.74 | 0.422 | 2.85 | -0.144 | -- | -- | -- | -- | -0.0131 | -- | -- | -- | -- | -- |
| 82.21 | 0.424 | 2.85 | -- | 0.0385 | -- | -- | -- | 0.00364 | 16.6 | -- | -- | -- | -- |
| 76.68 | 0.408 | 2.85 | -- | -- | 1.86 | -- | -- | 0.0198 | -- | 10.1 | 63 | -- | -- |
| 82.29 | 0.423 | 2.85 | -- | -- | -- | -- | -- | 0.0028 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.55 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 3 |
| 5 | 65.55 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 3 |
| 7 | 65.56 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 13 | 65.56 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 51 | 72.47 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 61 | 73.90 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 1 |
| 81 | 75.15 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 84 | 75.15 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 1 | 1 |
| 92 | 75.15 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 118 | 75.98 | humidity | 80.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 122 | 75.98 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 127 | 76.03 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 128 | 76.07 | radiation | 10.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 141 | 76.36 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 145 | 76.46 | humidity | 70.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 146 | 76.50 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 169 | 76.71 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 187 | 76.72 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 195 | 76.85 | wind | 9.0 | 90 | > th | dose dependent | rect. | 11 | 5 |
| 201 | 77.01 | temperature | 25.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 207 | 77.09 | humidity | 60.0 | 10 | < th | dose independent | rect. | 15 | 19 |
| 231 | 77.16 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 15 | 19 |
| 232 | 77.17 | wind | 1.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 235 | 77.18 | wind | 3.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 237 | 77.20 | humidity | 60.0 | 10 | > th | dose independent | sin | 11 | NA |
| 241 | 77.22 | humidity | 60.0 | 10 | < th | dose independent | sin | 11 | NA |
| 254 | 77.22 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 257 | 77.24 | wind | 9.0 | 90 | > th | dose independent | rect. | 11 | 5 |
| 267 | 77.27 | wind | 9.0 | 90 | > th | dose dependent | rect. | 1 | 15 |
| 299 | 77.37 | radiation | 40.0 | 720 | > th | dose independent | rect. | 15 | 1 |
| 317 | 77.37 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 23 |
| 323 | 77.43 | radiation | 10.0 | 10 | < th | dose independent | rect. | 2 | 23 |
| 326 | 77.45 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 344 | 77.49 | wind | 9.0 | 90 | > th | dose dependent | rect. | 19 | 21 |
| 352 | 77.54 | wind | 9.0 | 270 | > th | dose independent | rect. | 22 | 18 |
| 354 | 77.55 | wind | 9.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 357 | 77.55 | wind | 9.0 | 10 | < th | dose independent | rect. | 2 | 23 |
| 360 | 77.56 | wind | 9.0 | 270 | > th | dose independent | rect. | 9 | 7 |
| 369 | 77.58 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 10 |
| 386 | 77.64 | wind | 1.0 | 10 | > th | dose independent | rect. | 1 | 1 |
| 393 | 77.66 | wind | 9.0 | 720 | < th | dose independent | rect. | 6 | 8 |
| 412 | 77.71 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 23 |
| 419 | 77.75 | wind | 1.0 | 720 | < th | dose independent | rect. | 15 | 1 |
| 422 | 77.76 | humidity | 60.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 426 | 77.78 | humidity | 70.0 | 10 | > th | dose independent | rect. | 14 | 10 |
| 435 | 77.80 | humidity | 70.0 | 10 | > th | dose independent | rect. | 12 | 12 |
| 441 | 77.81 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 13 | 11 |
| 467 | 77.88 | wind | 7.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 475 | 77.90 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 10 |
| 509 | 77.94 | radiation | 30.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 536 | 77.95 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 676 | 77.98 | wind | 9.0 | 90 | < th | dose dependent | rect. | 2 | 12 |
| 698 | 78.01 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 2 | 2 |
| 733 | 78.01 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 12 |
| 745 | 78.01 | wind | 1.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 768 | 78.06 | wind | 1.0 | 90 | > th | dose independent | rect. | 24 | 16 |
| 771 | 78.06 | humidity | 60.0 | 10 | > th | dose independent | rect. | 2 | 23 |
| 806 | 78.12 | radiation | 10.0 | 10 | < th | dose independent | rect. | 10 | 14 |
| 808 | 78.12 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 23 |
| 835 | 78.15 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 1 | 1 |
| 840 | 78.15 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 850 | 78.16 | wind | 9.0 | 720 | < th | dose independent | rect. | 23 | 15 |
| 857 | 78.17 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 865 | 78.18 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 892 | 78.20 | wind | 9.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 909 | 78.21 | wind | 5.0 | 10 | < th | dose independent | rect. | 2 | 13 |
| 937 | 78.24 | wind | 9.0 | 270 | > th | dose independent | sin | 4 | NA |
| 944 | 78.25 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 13 |
| 947 | 78.26 | radiation | 10.0 | 10 | > th | dose independent | sin | 14 | NA |
| 972 | 78.28 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 9 |