Os12g0444800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT).
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Os12g0444800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.7 | 0.432 | 3.05 | -0.48 | 0.098 | 0.179 | -0.489 | -2.67 | -0.0763 | 8.43 | 24.55 | 1301 | -- | -- |
| 95.19 | 0.458 | 3 | -0.0956 | 0.102 | 0.95 | -0.284 | -- | 0.0824 | 5.02 | 56.76 | 1184 | -- | -- |
| 85.4 | 0.43 | 3.05 | -0.501 | 0.102 | 0.176 | -- | -2.65 | -0.0814 | 7.4 | 24.01 | 1300 | -- | -- |
| 89.22 | 0.44 | 2.99 | 0.0763 | 0.0928 | 0.877 | -- | -- | 0.139 | 5.05 | 58.72 | 1462 | -- | -- |
| 85.98 | 0.432 | 3.05 | -0.483 | -- | 0.161 | -- | -2.59 | -0.0689 | -- | 24.14 | 1300 | -- | -- |
| 98.59 | 0.465 | 3 | -0.152 | 0.0992 | -- | -0.287 | -- | 0.0594 | 6.89 | -- | -- | -- | -- |
| 98.8 | 0.465 | 3 | -0.158 | 0.0985 | -- | -- | -- | 0.0601 | 6.83 | -- | -- | -- | -- |
| 89.69 | 0.441 | 2.99 | 0.0697 | -- | 0.924 | -- | -- | 0.136 | -- | 58.83 | 1465 | -- | -- |
| 89.29 | 0.44 | 2.99 | -- | 0.0956 | 0.903 | -- | -- | 0.13 | 5.55 | 58.77 | 1465 | -- | -- |
| 99.31 | 0.466 | 3.01 | -0.155 | -- | -- | -- | -- | 0.062 | -- | -- | -- | -- | -- |
| 99.46 | 0.467 | 3 | -- | 0.0966 | -- | -- | -- | 0.0777 | 6.93 | -- | -- | -- | -- |
| 89.81 | 0.441 | 2.99 | -- | -- | 0.89 | -- | -- | 0.127 | -- | 58.81 | 1465 | -- | -- |
| 99.95 | 0.467 | 3 | -- | -- | -- | -- | -- | 0.0793 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.69 | radiation | 40 | 720 | < th | dose independent | sin | 12 | NA |
| 3 | 81.98 | radiation | 20 | 1440 | > th | dose dependent | rect. | 15 | 20 |
| 4 | 81.99 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 20 |
| 6 | 82.56 | radiation | 30 | 720 | > th | dose dependent | sin | 12 | NA |
| 7 | 82.59 | radiation | 30 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 14 | 82.94 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 32 | 83.01 | radiation | 10 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 39 | 83.12 | radiation | 20 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 110 | 83.65 | radiation | 10 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 137 | 83.81 | radiation | 40 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 160 | 83.87 | radiation | 30 | 1440 | < th | dose independent | rect. | 23 | 12 |
| 177 | 83.88 | radiation | 30 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 184 | 83.89 | radiation | 30 | 1440 | < th | dose independent | rect. | 19 | 16 |
| 213 | 83.94 | radiation | 40 | 1440 | < th | dose dependent | rect. | 15 | 20 |
| 303 | 84.35 | radiation | 40 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 441 | 84.75 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 446 | 84.80 | radiation | 20 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 450 | 84.83 | radiation | 40 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 514 | 85.11 | radiation | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 583 | 85.23 | radiation | 40 | 1440 | > th | dose independent | sin | 12 | NA |
| 644 | 85.44 | radiation | 40 | 1440 | < th | dose dependent | rect. | 3 | 8 |
| 645 | 85.44 | radiation | 40 | 1440 | < th | dose dependent | rect. | 23 | 12 |
| 795 | 85.67 | radiation | 30 | 720 | < th | dose independent | rect. | 2 | 22 |
| 800 | 85.70 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 822 | 85.81 | radiation | 30 | 720 | < th | dose independent | rect. | 7 | 17 |
| 861 | 85.91 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 915 | 86.05 | radiation | 30 | 720 | < th | dose independent | rect. | 2 | 16 |
| 918 | 86.06 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 947 | 86.09 | radiation | 30 | 720 | < th | dose independent | rect. | 20 | 23 |
| 978 | 86.15 | wind | 7 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 988 | 86.17 | radiation | 40 | 720 | < th | dose dependent | sin | 12 | NA |