Os05g0515600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT).
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Os05g0515600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 376.37 | 0.911 | 3.43 | 0.0835 | 0.575 | 1.28 | -0.351 | 3.18 | 0.0541 | 14.9 | 44.14 | 247 | -- | -- |
| 382.68 | 0.911 | 3.41 | 0.0544 | 0.505 | 1.21 | 0.173 | -- | 0.0607 | 14.5 | 42.56 | 272 | -- | -- |
| 376.73 | 0.904 | 3.43 | 0.0831 | 0.58 | 1.29 | -- | 3.05 | 0.057 | 14.8 | 44.61 | 245 | -- | -- |
| 382.28 | 0.911 | 3.42 | 0.0651 | 0.558 | 1.04 | -- | -- | 0.0581 | 14.8 | 40 | 272 | -- | -- |
| 390.02 | 0.92 | 3.44 | 0.0699 | -- | 1.82 | -- | 2.94 | 0.0174 | -- | 42.15 | 265 | -- | -- |
| 392.18 | 0.928 | 3.41 | 0.0117 | 0.825 | -- | 0.0758 | -- | 0.096 | 14.7 | -- | -- | -- | -- |
| 392.2 | 0.927 | 3.41 | 0.0136 | 0.825 | -- | -- | -- | 0.0964 | 14.7 | -- | -- | -- | -- |
| 395.08 | 0.926 | 3.43 | 0.0234 | -- | 1.56 | -- | -- | 0.0181 | -- | 40 | 301 | -- | -- |
| 382.3 | 0.911 | 3.42 | -- | 0.563 | 0.991 | -- | -- | 0.0492 | 14.8 | 40 | 272 | -- | -- |
| 431.88 | 0.971 | 3.41 | -0.0215 | -- | -- | -- | -- | 0.0756 | -- | -- | -- | -- | -- |
| 392.21 | 0.926 | 3.41 | -- | 0.825 | -- | -- | -- | 0.0949 | 14.7 | -- | -- | -- | -- |
| 395.1 | 0.926 | 3.43 | -- | -- | 1.57 | -- | -- | 0.0148 | -- | 40 | 301 | -- | -- |
| 431.89 | 0.97 | 3.41 | -- | -- | -- | -- | -- | 0.0779 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 369.45 | humidity | 80 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 3 | 369.88 | humidity | 80 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 9 | 370.23 | humidity | 80 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 11 | 370.40 | humidity | 80 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 12 | 370.42 | humidity | 80 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 34 | 370.78 | humidity | 80 | 14400 | < th | dose dependent | rect. | 23 | 9 |
| 41 | 370.84 | humidity | 80 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 43 | 370.85 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 7 | 3 |
| 55 | 370.98 | humidity | 80 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 64 | 371.13 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 6 | 4 |
| 79 | 371.41 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 102 | 371.71 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 159 | 372.79 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 160 | 372.81 | radiation | 40 | 270 | > th | dose dependent | sin | 12 | NA |
| 161 | 372.84 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 165 | 372.96 | wind | 3 | 270 | > th | dose independent | rect. | 8 | 7 |
| 166 | 372.97 | temperature | 30 | 270 | > th | dose independent | rect. | 9 | 4 |
| 179 | 373.29 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 24 | 3 |
| 187 | 373.45 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 1 | 1 |
| 188 | 373.46 | radiation | 40 | 10 | > th | dose dependent | rect. | 12 | 22 |
| 227 | 373.92 | radiation | 40 | 270 | > th | dose dependent | rect. | 14 | 20 |
| 239 | 374.22 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 22 | 14 |
| 251 | 374.50 | wind | 3 | 30 | > th | dose dependent | rect. | 12 | 3 |
| 285 | 374.93 | atmosphere | 1000 | 720 | < th | dose dependent | sin | 8 | NA |
| 296 | 375.04 | wind | 7 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 301 | 375.06 | wind | 7 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 302 | 375.06 | atmosphere | 1015 | 30 | < th | dose independent | rect. | 13 | 23 |
| 311 | 375.10 | wind | 3 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 335 | 375.30 | wind | 5 | 30 | > th | dose independent | rect. | 12 | 3 |
| 349 | 375.39 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 22 | 5 |
| 358 | 375.47 | wind | 1 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 360 | 375.48 | wind | 5 | 90 | > th | dose independent | rect. | 12 | 1 |
| 368 | 375.53 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 443 | 376.09 | humidity | 70 | 270 | > th | dose independent | rect. | 1 | 15 |
| 455 | 376.16 | wind | 7 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 473 | 376.26 | radiation | 40 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 532 | 376.53 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 533 | 376.54 | temperature | 30 | 10 | > th | dose independent | rect. | 11 | 7 |
| 591 | 376.77 | humidity | 70 | 270 | > th | dose independent | rect. | 10 | 9 |
| 620 | 376.94 | temperature | 25 | 270 | > th | dose dependent | rect. | 23 | 13 |
| 632 | 377.01 | temperature | 25 | 270 | > th | dose dependent | rect. | 8 | 4 |
| 639 | 377.04 | humidity | 70 | 720 | > th | dose dependent | rect. | 11 | 3 |
| 657 | 377.12 | temperature | 30 | 10 | > th | dose independent | rect. | 15 | 22 |
| 660 | 377.14 | atmosphere | 1000 | 270 | < th | dose independent | sin | 5 | NA |
| 673 | 377.17 | temperature | 30 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 676 | 377.18 | wind | 7 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 688 | 377.23 | wind | 3 | 720 | > th | dose independent | rect. | 8 | 1 |
| 693 | 377.26 | atmosphere | 1000 | 720 | < th | dose independent | sin | 8 | NA |
| 722 | 377.31 | temperature | 30 | 10 | > th | dose dependent | rect. | 9 | 9 |
| 740 | 377.32 | radiation | 40 | 270 | < th | dose independent | rect. | 9 | 23 |
| 742 | 377.32 | humidity | 60 | 10 | > th | dose dependent | rect. | 4 | 17 |
| 750 | 377.37 | wind | 3 | 270 | < th | dose independent | rect. | 3 | 15 |
| 755 | 377.39 | radiation | 40 | 270 | > th | dose dependent | sin | 5 | NA |
| 782 | 377.46 | temperature | 30 | 270 | > th | dose independent | sin | 8 | NA |
| 792 | 377.48 | temperature | 30 | 10 | > th | dose independent | rect. | 11 | 2 |
| 794 | 377.48 | radiation | 40 | 270 | > th | dose dependent | rect. | 8 | 7 |
| 812 | 377.49 | radiation | 40 | 270 | > th | dose dependent | no | NA | NA |
| 963 | 377.55 | temperature | 25 | 270 | > th | dose dependent | sin | 7 | NA |
| 965 | 377.56 | humidity | 70 | 90 | < th | dose independent | rect. | 9 | 8 |
| 980 | 377.62 | wind | 1 | 90 | > th | dose dependent | rect. | 8 | 10 |
| 996 | 377.66 | humidity | 80 | 10 | < th | dose independent | rect. | 8 | 10 |